lowQualScore : 1
lowQualScore : 00 0 5 0 1111 0 11 11111 00 0 0 0 0 0 44 0 000 2 11
lowQualScore : .. . . . .... . .. ..... .. . . . . . .. . ... . ..
lowQualScore : 66 4 3 4 3333 4 33 00000 66 6 4 4 4 4 55 4 777 1 22
consensus : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
Reference ( gi|133114 ) : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133103 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133207 : CAGAGTTATCGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133205 : CAGAGTTGTTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133132 : CAGAGTTATTGCCCT--TT-GGTAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133131 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTGCCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133199 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AAAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133175 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGTATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133143 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAAAGGAAGTG--CAGTGTACA
gi|133101 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133099 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133097 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133221 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTTAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133171 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTTAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133113 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133107 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133083 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CACTGTACA
gi|133082 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATG-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133166 : CAGAGTTATTGCCCT--TT-GATAT-T-TT----T-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133078 : CAGAATTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCTGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133173 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTATCGGA-TG-GA-AT--TTCATC-AAGCTTCAGACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133165 : CAAAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133158 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----T--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CATTGTACA
gi|133220 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AAAATAAAATGAGAGGAAGTG--CAGTGTACA
gi|133210 : CAGAGTTGTTGCCCT--TT-GATAT-T-TT---TT-CTTGTCTGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATAGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133212 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATT-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAATGTACA
gi|133088 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACTGGA-TG-GA-A---TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133153 : CAGAGTTATTGCCAT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133142 : CAGAGTTATTGCCCT--TT-GATAT-T-TTT--TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133091 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATA-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133146 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATGATGAGAGGAAGTG--TAGTGTACA
gi|133225 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATC-AAACTTAATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133125 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATAAGAGGAAGTG--CAATGTACA
gi|133157 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATAACAGGAAGTG--CAGTGTACA
gi|133058 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133092 : CAGAGTTATTGCCCT--TT-GCTAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---ACAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133074 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---GT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133195 : CAGAGTTATTGCCCT--TT-GATAT-T-TT----T-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAAAGGAAGTG--CAGTGTACA
gi|133071 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCTTC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CATGGTACA
gi|133162 : CAGAGTTATTGCCCA--TT-GATATAT-TT---CC-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133079 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAATTG--CATTGTACA
gi|133217 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATC-AAGCTTCGTACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133136 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTACGGAGCATA-A-----C--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133161 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCAGT-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133154 : CAGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCTGA-TG-AA-AT--TTCATC-AAGCTTCTTACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133102 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACATCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133206 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133204 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133201 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133198 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133194 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133189 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133187 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133182 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133181 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCTGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133179 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133174 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133152 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133147 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133109 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133104 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133072 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133115 : CAGAGTTATTACCCT--TT-GATATAT-TT---CC-CTTGTCTGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133085 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAGTGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133127 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTATTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133098 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCTGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133119 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTTATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133149 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTTGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133170 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGAACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133108 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCTGGAGCATT-A-----C--TTTTAA-AGCTCTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133124 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCTGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-AA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133120 : CAGAGTTATTGCCCT--TT-GATAT-A-TT---TCACTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAAAATAATGACAGGAAGTG--CAGTGTACA
gi|133089 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----CTATTG--A-AGTACTGGA-TA-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133110 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGT
gi|133105 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-A---TTAATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133084 : CAGAGTTATTGCCCT--TT-AATATAT-TT---CC-CTTGTCTGGAGCATT-A-----C--TTTTAA-AGTTATGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133139 : CAGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAGTATAATGACAGGAAGTG--CAGT
gi|133151 : CAGAGTTACTGCCCT--TT-GATATAT-TT---CC-CTTGTCTGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-AA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133213 : CAGAGTTATTGCCCA--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATA-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CATTGTACAaca
gi|133215 : CAGAGTTATTGCCCT--TT-GATAT-AATT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTTATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGT
gi|133054 : CATAATTATTCCCCT--TT-GTTAT-T-TT---CC-CTTGTTTGGAGCATA-C-----C--TTGAAA-AGTTTTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAAAGCATTGACAGGAAGTG--GACAGTACA
gi|133055 : CAGAATTATTCCCCT--TT-GTTAT-T-TT---CC-CTTGTTTGGAGTATA-T-----C--ATGAAC-AGTTTTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAGAGCATTGACAGGAAGTGGACAGTATA
gi|133062 : CAGAATTATTCCCCT--TT-GTTAT-T-TC---CC-CTTGTTTTGAGCATACAAGTACC--TTGAAA-AGTTTTGAA-GT-GA-A---TACTTG-AAACTGCATACAATGAT---AGAGAGCACTGACAGGAAGTG--GACAGTACA
gi|133061 : CAGAATTAAT-CCCG--TT-GTTAT-T-TT---C--CTTGTTTGGAGCATA-C-----C--TTGAAA-AGT--TGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAGAGTATTGACAGAAAGTG--GACAGTACA
gi|133069 : CAGAATTATTCCCCT--TT-G-TAT-T-TT---CC-TTTGTTTGAAGCATA-C-----C--TTGAAA-AGC-TTGAA-TG----CT--TTGAT----ACTGCAAACAATGAT---TGAGCAT--TGACAGGAAGTG--GACAGTACA
gi|133056 : CAGAATTATTCCCCT--GT---TAT-T-TT---CC-CTTGTTTGGAGCATA-C-----C--TTGAAA-AG-ATTTGA-AGTGA-ATGCTT--TG-AAACTGCATACAATGATAAGAGAGCAT--TGACAGGAAGAG--GACAGTACA
gi|133070 : CAGAAGTATT-CCCT--TT-GTTAT-T-TT---CC-CTTGTTTGGAGCATA-C-----C--TTGAAA-AGTTTTTAA-GT-GA-ATGCTT--TG-AAACTACATACAATG
gi|133057 : CAGAATTATTCGCCT--TT-GTTAT-T-TT---CC-ACTATTTGAAGTATA-C-----C--TTGAAA-TGTTTTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAGTGAT---AGAGAGCATTGACAGGAAGTGGACAGT
gi|133067 : CAGAATTATTTCCTT--TTTGTTAT-T-TT---CC-CTTGTTTGGAGCAT-----------TTGAA---GT---GAA-TG-----C--TT--TG-AAACTGCATACAATGAT---AGAGAGCATTGACAAGAAGTG--AACAGTACAac
gi|133066 : CAGAATCAACCCCTT--TT-GTTAT-T-TT---CC-CTTGTTTGGAGCATA-C-----C--TTGAAA-AGTTTTAAA-GT-GA-ATGCTT--TG-AAACTGCATATATTGAT---AGAGAGCATTGACAGAAA
gi|133068 : CGGAATTATT--CCTGATT-GCTAT-T-TA---CA-CTTGTTTGAAGTATA-C-----C--TTGAAATAAT-TTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAGAGCATTAACAGTAAGTG--AACAGTACAaaggatagtaca
gi|133254 : AGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133258 : AGAGTTATTGCCCT--TT-GATAT-T-TT---TT-CTTGTTCGGATCATA-A-----C--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133256 : AGAGTTATTGCCCT--TT-GATATAT-TT---CC-CTTGTCCGGAGCATT-A-----C--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAATGTACA
gi|133261 : GAATTGTCTCCCT--TT-ATTAA-T-TTACACT-TTTGTCCGGAGCATA-A-----C--TCGAAA-ACTATTCAA--G-CA-AT--TTTATTGAATCTTCACACAATGAC---AGAGGACATTGAGAGGAAGTG--CATTGTATA
gi|133268 : GAATTATTCCCCT--TT-GATAT-T-TT---CC-CTTATTTGAAGCATA-C-----C--TTGAAA-AGTTCTGAAGTG-GATGC--TT--TG-AAACTGCATACAATGAT---AGAGAGCATTGACAAGTAGTG--GACTGTTCA
gi|133300 : CCCT--TT-GATAT-T-TT---TT-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTGCCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133318 : ttCCCT--TT-GATAT-T-TT---TC-CTTGTCCGGAGCATA-A-----C--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATT-AAACATCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|133284 ): AATTATCTCCCTTTATTAAATTTACACTATTTAAAAGTTTTGAAGTGAATGCTTTGAAACTGCATACTTTTTATAGAGATTTGACAGGAAGTGGACAGTACA
Unaligned ( gi|133394 ): AAGTTCTGAAGTGAATGCTTTGAAACTGCATACAATGATAGAAAACAGTAAGTGGACAGTACA
Alignments
lowQualScore : 1
lowQualScore : 00 0 8 000 111111 11 1 0 0 0 0 44 0 000 1 11
lowQualScore : .. . . ... ...... .. . . . . . .. . ... . ..
lowQualScore : 66 4 8 777 888888 00 0 4 4 4 4 55 4 777 9 11
consensus : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
Reference ( family-123 ) : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133054 : CATAATTATTCCCCT--TT-GTTAT-TTT---CCCTTGTTTGGAGCATA-----CC--TTGAAA-AGTTTTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAAAGCATTGACAGGAAGTG--GACAGTACA
gi|133055 : CAGAATTATTCCCCT--TT-GTTAT-TTT---CCCTTGTTTGGAGTATA-----TC--ATGAAC-AGTTTTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAGAGCATTGACAGGAAGTGGACAGTATA
gi|133056 : CAGAATTATTCCCCT--GT---TAT-TTT---CCCTTGTTTGGAGCATA-----CC--TTGAAA-AG-ATTTGA-AGTGA-ATGCTT--TG-AAACTGCATACAATGATAAGAGAGCAT--TGACAGGAAGAG--GACAGTACA
gi|133057 : CAGAATTATTCGCCT--TT-GTTAT-TTT---CCACTATTTGAAGTATA-----CC--TTGAAA-TGTTTTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAGTGAT---AGAGAGCATTGACAGGAAGTGGACAGT
gi|133058 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTac
gi|133061 : CAGAATTAAT-CCCG--TT-G-T-TATTT---TCCTTGTTTGGAGCATA-----CC--TTGAAA-AGT--TGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAGAGTATTGACAGAAAGTG--GACAGTACA
gi|133062 : CAGAATTATTCCCCT--TT-GTTAT-TTC---CCCTTGTTTTGAGCATACAAGTACC-TTGAAA-AGTTTTGAA-GT-GA-AT--A-CTTG-AAACTGCATACAATGAT---AGAGAGCACTGACAGGAAGTG--GACAGTACA
gi|133066 : CAGAATCAACCCCTT--TT-GTTAT-TTT---CCCTTGTTTGGAGCATA-----CC--TTGAAA-AGTTTTAAA-GT-GA-ATGCTT--TG-AAACTGCATATATTGAT---AGAGAGCATTGACAGAAA
gi|133067 : CAGAATTATTTCCTT--TTTGTTAT-TTT---CCCTTGTTTGGAGCAT----------TTG--A-AGT---GAA-TG-----C--TT--TG-AAACTGCATACAATGAT---AGAGAGCATTGACAAGAAGTG--AACAGTACAaaggatagtaca
gi|133068 : CGGAATTATT--CCTGATT-GCTAT-TTA---CACTTGTTTGAAGTATA-----CC--TTGAAATAAT-TTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAGAGCATTAACAGTAAGTG--AACAGTACA
gi|133069 : CAGAATTATTCCCCT--TT-G-TAT-TTT---CCTTTGTTTGAAGCATA-----CC--TTGAAA-AGC-TTGAA-TG----CT--TTGAT----ACTGCAAACAATGAT---TGAGCAT--TGACAGGAAGTG--GACAGTACA
gi|133070 : CAGAAGTATT-CCCT--TT-GTTAT-TTT---CCCTTGTTTGGAGCATA-----CC--TTGAAA-AGTTTTTAA-GT-GA-ATGCTT--TG-AAACTACATACAATG
gi|133071 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCTTC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CATGGTACA
gi|133072 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133074 : CAGAGTTATTGCCCT--TT-GATAT-TTT---GTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133078 : CAGAATTATTGCCCT--TT-GATAT-TTT---TTCTTGTCTGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133079 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAATTG--CATTGTACA
gi|133082 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATG-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133083 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CACTGTACA
gi|133084 : CAGAGTTATTGCCCT--TT-AATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTTATGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133085 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAGTGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133088 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--T-CATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133089 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----ACTATTG--A-AGTACTGGA-TA-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133091 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATA-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133092 : CAGAGTTATTGCCCT--TT-GCTAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---ACAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133097 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133098 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133099 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133101 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133102 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACATCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133103 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133104 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133105 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-A---TTAATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133107 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133108 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGCTCTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133109 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133110 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGT
gi|133113 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133114 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133115 : CAGAGTTATTACCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133119 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTTATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133120 : CAGAGTTATTGCCCT--TT-GATATATTT---CACTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAAAATAATGACAGGAAGTG--CAGTGTACA
gi|133124 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-AA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133125 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATAAGAGGAAGTG--CAATGTACA
gi|133127 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTATTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133131 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTGCCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133132 : CAGAGTTATTGCCCT--TT-GGTAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133136 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTACGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133139 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAGTATAATGACAGGAAGTG--CAGT
gi|133142 : CAGAGTTATTGCCCT--TT-GATATTTTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133143 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAAAGGAAGTG--CAGTGTACA
gi|133146 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATGATGAGAGGAAGTG--TAGTGTACA
gi|133147 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133149 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTTGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133151 : CAGAGTTACTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-AA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133152 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACAaca
gi|133153 : CAGAGTTATTGCCAT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133154 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-AA-AT--TTCATC-AAGCTTCTTACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133157 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATAACAGGAAGTG--CAGTGTACA
gi|133158 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AT--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CATTGTACA
gi|133161 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGT-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133162 : CAGAGTTATTGCCCA--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133165 : CAAAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133166 : CAGAGTTATTGCCCT--TT-GATATTTTT---C--TTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133170 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGAACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133171 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTTAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133173 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTATCGGA-TG-GA-AT--TTCATC-AAGCTTCAGACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133174 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133175 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGTATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133179 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133181 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133182 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133187 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133189 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133194 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133195 : CAGAGTTATTGCCCT--TT-GATATTTTT---C--TTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAAAGGAAGTG--CAGTGTACA
gi|133198 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133199 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AAAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133201 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133204 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133205 : CAGAGTTGTTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133206 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133207 : CAGAGTTATCGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133210 : CAGAGTTGTTGCCCT--TT-GATAT-TTT---TTCTTGTCTGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATAGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133212 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATT-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAATGTACA
gi|133213 : CAGAGTTATTGCCCA--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATA-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CATTGTACA
gi|133215 : CAGAGTTATTGCCCT--TT-GATATAATT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTTATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGT
gi|133217 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATC-AAGCTTCGTACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133220 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AAAATAAAATGAGAGGAAGTG--CAGTGTACA
gi|133221 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTTAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133225 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATC-AAACTTAATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133254 : AGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133256 : AGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAATGTACA
gi|133258 : AGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTTCGGATCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133261 : GAATTGTCTCCCT--TT-ATTA-ATTTACACTTTTGTCCGGAGCATA-----AC--TCGAAA-ACTATTCAA--G-CA-AT--TTTATTGAATCTTCACACAATGAC---AGAGGACATTGAGAGGAAGTG--CATTGTATA
gi|133268 : GAATTATTCCCCT--TT-GATAT-TTT---CCCTTATTTGAAGCATA-----CC--TTGAAA-AGTTCTGAAGTG-GATGC--TT--TG-AAACTGCATACAATGAT---AGAGAGCATTGACAAGTAGTG--GACTGTTCA
gi|133300 : CCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTGCCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133318 : ttCCCT--TT-GATAT-TTT---TCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATT-AAACATCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|133284 ): AATTATCTCCCTTTATTAAATTTACACTATTTAAAAGTTTTGAAGTGAATGCTTTGAAACTGCATACTTTTTATAGAGATTTGACAGGAAGTGGACAGTACA
Unaligned ( gi|133394 ): AAGTTCTGAAGTGAATGCTTTGAAACTGCATACAATGATAGAAAACAGTAAGTGGACAGTACA
Alignments
lowQualScore : 1
lowQualScore : 00 0 8 000 111111 11 1 0 0 0 0 44 0 000 1 11
lowQualScore : .. . . ... ...... .. . . . . . .. . ... . ..
lowQualScore : 66 4 8 777 888888 00 0 4 4 4 4 55 4 777 9 11
consensus : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
Reference ( family-123 ) : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133054 : CATAATTATTCCCCT--TT-GTTAT-TTT---CCCTTGTTTGGAGCATA-----CC--TTGAAA-AGTTTTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAAAGCATTGACAGGAAGTG--GACAGTACA
gi|133055 : CAGAATTATTCCCCT--TT-GTTAT-TTT---CCCTTGTTTGGAGTATA-----TC--ATGAAC-AGTTTTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAGAGCATTGACAGGAAGTGGACAGTATA
gi|133056 : CAGAATTATTCCCCT--GT---TAT-TTT---CCCTTGTTTGGAGCATA-----CC--TTGAAA-AG-ATTTGA-AGTGA-ATGCTT--TG-AAACTGCATACAATGATAAGAGAGCAT--TGACAGGAAGAG--GACAGTACA
gi|133057 : CAGAATTATTCGCCT--TT-GTTAT-TTT---CCACTATTTGAAGTATA-----CC--TTGAAA-TGTTTTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAGTGAT---AGAGAGCATTGACAGGAAGTGGACAGT
gi|133058 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTac
gi|133061 : CAGAATTAAT-CCCG--TT-G-T-TATTT---TCCTTGTTTGGAGCATA-----CC--TTGAAA-AGT--TGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAGAGTATTGACAGAAAGTG--GACAGTACA
gi|133062 : CAGAATTATTCCCCT--TT-GTTAT-TTC---CCCTTGTTTTGAGCATACAAGTACC-TTGAAA-AGTTTTGAA-GT-GA-AT--A-CTTG-AAACTGCATACAATGAT---AGAGAGCACTGACAGGAAGTG--GACAGTACA
gi|133066 : CAGAATCAACCCCTT--TT-GTTAT-TTT---CCCTTGTTTGGAGCATA-----CC--TTGAAA-AGTTTTAAA-GT-GA-ATGCTT--TG-AAACTGCATATATTGAT---AGAGAGCATTGACAGAAA
gi|133067 : CAGAATTATTTCCTT--TTTGTTAT-TTT---CCCTTGTTTGGAGCAT----------TTG--A-AGT---GAA-TG-----C--TT--TG-AAACTGCATACAATGAT---AGAGAGCATTGACAAGAAGTG--AACAGTACAaaggatagtaca
gi|133068 : CGGAATTATT--CCTGATT-GCTAT-TTA---CACTTGTTTGAAGTATA-----CC--TTGAAATAAT-TTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAGAGCATTAACAGTAAGTG--AACAGTACA
gi|133069 : CAGAATTATTCCCCT--TT-G-TAT-TTT---CCTTTGTTTGAAGCATA-----CC--TTGAAA-AGC-TTGAA-TG----CT--TTGAT----ACTGCAAACAATGAT---TGAGCAT--TGACAGGAAGTG--GACAGTACA
gi|133070 : CAGAAGTATT-CCCT--TT-GTTAT-TTT---CCCTTGTTTGGAGCATA-----CC--TTGAAA-AGTTTTTAA-GT-GA-ATGCTT--TG-AAACTACATACAATG
gi|133071 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCTTC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CATGGTACA
gi|133072 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133074 : CAGAGTTATTGCCCT--TT-GATAT-TTT---GTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133078 : CAGAATTATTGCCCT--TT-GATAT-TTT---TTCTTGTCTGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133079 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAATTG--CATTGTACA
gi|133082 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATG-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133083 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CACTGTACA
gi|133084 : CAGAGTTATTGCCCT--TT-AATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTTATGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133085 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAGTGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133088 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--T-CATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133089 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----ACTATTG--A-AGTACTGGA-TA-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133091 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATA-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133092 : CAGAGTTATTGCCCT--TT-GCTAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---ACAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133097 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133098 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133099 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133101 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133102 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACATCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133103 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133104 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133105 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-A---TTAATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133107 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133108 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGCTCTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133109 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133110 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGT
gi|133113 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133114 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133115 : CAGAGTTATTACCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133119 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTTATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133120 : CAGAGTTATTGCCCT--TT-GATATATTT---CACTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAAAATAATGACAGGAAGTG--CAGTGTACA
gi|133124 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-AA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133125 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATAAGAGGAAGTG--CAATGTACA
gi|133127 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTATTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133131 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTGCCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133132 : CAGAGTTATTGCCCT--TT-GGTAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133136 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTACGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133139 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAGTATAATGACAGGAAGTG--CAGT
gi|133142 : CAGAGTTATTGCCCT--TT-GATATTTTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133143 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAAAGGAAGTG--CAGTGTACA
gi|133146 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATGATGAGAGGAAGTG--TAGTGTACA
gi|133147 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133149 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTTGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133151 : CAGAGTTACTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-AA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133152 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACAaca
gi|133153 : CAGAGTTATTGCCAT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133154 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-AA-AT--TTCATC-AAGCTTCTTACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133157 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATAACAGGAAGTG--CAGTGTACA
gi|133158 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AT--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CATTGTACA
gi|133161 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGT-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133162 : CAGAGTTATTGCCCA--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133165 : CAAAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133166 : CAGAGTTATTGCCCT--TT-GATATTTTT---C--TTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133170 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGAACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133171 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTTAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133173 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTATCGGA-TG-GA-AT--TTCATC-AAGCTTCAGACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133174 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133175 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGTATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133179 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133181 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133182 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133187 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133189 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133194 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133195 : CAGAGTTATTGCCCT--TT-GATATTTTT---C--TTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAAAGGAAGTG--CAGTGTACA
gi|133198 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133199 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AAAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133201 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133204 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133205 : CAGAGTTGTTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133206 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133207 : CAGAGTTATCGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133210 : CAGAGTTGTTGCCCT--TT-GATAT-TTT---TTCTTGTCTGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATAGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133212 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATT-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAATGTACA
gi|133213 : CAGAGTTATTGCCCA--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATA-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CATTGTACA
gi|133215 : CAGAGTTATTGCCCT--TT-GATATAATT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTTATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGT
gi|133217 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATC-AAGCTTCGTACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133220 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AAAATAAAATGAGAGGAAGTG--CAGTGTACA
gi|133221 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTTAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133225 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATC-AAACTTAATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133254 : AGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133256 : AGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAATGTACA
gi|133258 : AGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTTCGGATCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133261 : GAATTGTCTCCCT--TT-ATTA-ATTTACACTTTTGTCCGGAGCATA-----AC--TCGAAA-ACTATTCAA--G-CA-AT--TTTATTGAATCTTCACACAATGAC---AGAGGACATTGAGAGGAAGTG--CATTGTATA
gi|133268 : GAATTATTCCCCT--TT-GATAT-TTT---CCCTTATTTGAAGCATA-----CC--TTGAAA-AGTTCTGAAGTG-GATGC--TT--TG-AAACTGCATACAATGAT---AGAGAGCATTGACAAGTAGTG--GACTGTTCA
gi|133300 : CCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTGCCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133318 : ttCCCT--TT-GATAT-TTT---TCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATT-AAACATCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
blockSeqs : A ACAAGT A GC C GA
blockSeqs : A A A GC C GA
blockSeqs : A A A GC C .
blockSeqs : A A A GC G .
blockSeqs : A A A GC C .
blockSeqs : A A A GC C .
blockSeqs : A A A GC C .
blockSeqs : A A A . C .
blockSeqs : A A A . C .
blockSeqs : A A A . C .
blockSeqs : A A A . G .
blockSeqs : A T T . C .
blockSeqs : A A A . C .
blockSeqs : A A A . G .
blockSeqs : A A A . G .
blockSeqs : A A A . G .
blockSeqs : A A A . G .
blockSeqs : A T T . G .
blockSeqs : T T T . C .
blockSeqs : A A A . G .
blockSeqs : A T A . C .
blockSeqs : A A A . G .
blockSeqs : A A A . G .
blockSeqs : A A T . G .
blockSeqs : A T A . C .
blockSeqs : T A A . G .
blockSeqs : A A A . G .
blockSeqs : A A A . G .
blockSeqs : A A T . G .
blockSeqs : A T T . C .
blockSeqs : A T A . C .
blockSeqs : A A T . G .
blockSeqs : A T T . G .
blockSeqs : A T T . C .
blockSeqs : T T A . C .
blockSeqs : A A A . G .
blockSeqs : A A T . G .
blockSeqs : A T T . G .
blockSeqs : A T T . C .
blockSeqs : A T T . C .
blockSeqs : A T A . C .
blockSeqs : A A T . G .
blockSeqs : A T A . C .
blockSeqs : A A A . G .
blockSeqs : . A A . G .
blockSeqs : . A T . G .
blockSeqs : . T A . C .
blockSeqs : . A A . C .
blockSeqs : . A A . A .
blockSeqs : . A T . G .
blockSeqs : . T T . C .
blockSeqs : . T T . C .
blockSeqs : . T T . G .
blockSeqs : . T A . C .
blockSeqs : . A A . G .
blockSeqs : . A A . G .
blockSeqs : . A A . C .
blockSeqs : . A A . G .
blockSeqs : . A A . G .
blockSeqs : . A A . G .
blockSeqs : . A A . G .
blockSeqs : . A T . G .
blockSeqs : . T A . C .
blockSeqs : . A A . G .
blockSeqs : . A T . G .
blockSeqs : . T A . C .
blockSeqs : . A T . G .
blockSeqs : . T T . C .
blockSeqs : . T T . C .
blockSeqs : . T T . C .
blockSeqs : . T T . C .
blockSeqs : . T T . C .
blockSeqs : . T A . C .
blockSeqs : . A T . A .
blockSeqs : . T A . C .
blockSeqs : . A T . G .
blockSeqs : . T T . C .
blockSeqs : . T A . C .
blockSeqs : . A T . G .
blockSeqs : . T A . C .
blockSeqs : . A A . G .
blockSeqs : . A A . G .
blockSeqs : . A T . G .
blockSeqs : . T T . C .
blockSeqs : . T A . C .
blockSeqs : . A A . G .
blockSeqs : . A A . G .
blockSeqs : . A A . G .
blockSeqs : . A A . G .
blockSeqs : . A T . G .
blockSeqs : . T A . C .
blockSeqs : . A A . G .
blockSeqs : . A A . G .
blockSeqs : . A A . C .
blockSeqs : . A A . G .
blockSeqs : . A . . G
blockSeqs : . . . .
blockSeqCons : **
originalCons : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
finalCons : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|133284 ): AATTATCTCCCTTTATTAAATTTACACTATTTAAAAGTTTTGAAGTGAATGCTTTGAAACTGCATACTTTTTATAGAGATTTGACAGGAAGTGGACAGTACA
Unaligned ( gi|133394 ): AAGTTCTGAAGTGAATGCTTTGAAACTGCATACAATGATAGAAAACAGTAAGTGGACAGTACA
Alignments
lowQualScore : 1
lowQualScore : 00 0 8 000 111111 11 1 0 0 0 0 44 0 000 1 11
lowQualScore : .. . . ... ...... .. . . . . . .. . ... . ..
lowQualScore : 66 4 8 777 888888 00 0 4 4 4 4 55 4 777 9 11
consensus : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
Reference ( family-123 ) : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133054 : CATAATTATTCCCCT--TT-GTTAT-TTT---CCCTTGTTTGGAGCATA-----CC--TTGAAA-AGTTTTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAAAGCATTGACAGGAAGTG--GACAGTACA
gi|133055 : CAGAATTATTCCCCT--TT-GTTAT-TTT---CCCTTGTTTGGAGTATA-----TC--ATGAAC-AGTTTTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAGAGCATTGACAGGAAGTGGACAGTATA
gi|133056 : CAGAATTATTCCCCT--GT---TAT-TTT---CCCTTGTTTGGAGCATA-----CC--TTGAAA-AG-ATTTGA-AGTGA-ATGCTT--TG-AAACTGCATACAATGATAAGAGAGCAT--TGACAGGAAGAG--GACAGTACA
gi|133057 : CAGAATTATTCGCCT--TT-GTTAT-TTT---CCACTATTTGAAGTATA-----CC--TTGAAA-TGTTTTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAGTGAT---AGAGAGCATTGACAGGAAGTGGACAGT
gi|133058 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTac
gi|133061 : CAGAATTAAT-CCCG--TT-G-T-TATTT---TCCTTGTTTGGAGCATA-----CC--TTGAAA-AGT--TGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAGAGTATTGACAGAAAGTG--GACAGTACA
gi|133062 : CAGAATTATTCCCCT--TT-GTTAT-TTC---CCCTTGTTTTGAGCATACAAGTACC-TTGAAA-AGTTTTGAA-GT-GA-AT--A-CTTG-AAACTGCATACAATGAT---AGAGAGCACTGACAGGAAGTG--GACAGTACA
gi|133066 : CAGAATCAACCCCTT--TT-GTTAT-TTT---CCCTTGTTTGGAGCATA-----CC--TTGAAA-AGTTTTAAA-GT-GA-ATGCTT--TG-AAACTGCATATATTGAT---AGAGAGCATTGACAGAAA
gi|133067 : CAGAATTATTTCCTT--TTTGTTAT-TTT---CCCTTGTTTGGAGCAT----------TTG--A-AGT---GAA-TG-----C--TT--TG-AAACTGCATACAATGAT---AGAGAGCATTGACAAGAAGTG--AACAGTACAaaggatagtaca
gi|133068 : CGGAATTATT--CCTGATT-GCTAT-TTA---CACTTGTTTGAAGTATA-----CC--TTGAAATAAT-TTGAA-GT-GA-ATGCTT--TG-AAACTGCATACAATGAT---AGAGAGCATTAACAGTAAGTG--AACAGTACA
gi|133069 : CAGAATTATTCCCCT--TT-G-TAT-TTT---CCTTTGTTTGAAGCATA-----CC--TTGAAA-AGC-TTGAA-TG----CT--TTGAT----ACTGCAAACAATGAT---TGAGCAT--TGACAGGAAGTG--GACAGTACA
gi|133070 : CAGAAGTATT-CCCT--TT-GTTAT-TTT---CCCTTGTTTGGAGCATA-----CC--TTGAAA-AGTTTTTAA-GT-GA-ATGCTT--TG-AAACTACATACAATG
gi|133071 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCTTC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CATGGTACA
gi|133072 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133074 : CAGAGTTATTGCCCT--TT-GATAT-TTT---GTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133078 : CAGAATTATTGCCCT--TT-GATAT-TTT---TTCTTGTCTGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133079 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAATTG--CATTGTACA
gi|133082 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATG-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133083 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CACTGTACA
gi|133084 : CAGAGTTATTGCCCT--TT-AATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTTATGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133085 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAGTGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133088 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--T-CATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133089 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----ACTATTG--A-AGTACTGGA-TA-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133091 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATA-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133092 : CAGAGTTATTGCCCT--TT-GCTAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---ACAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133097 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133098 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133099 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133101 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133102 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACATCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133103 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133104 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133105 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-A---TTAATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133107 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133108 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGCTCTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133109 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133110 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGT
gi|133113 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133114 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133115 : CAGAGTTATTACCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133119 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTTATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133120 : CAGAGTTATTGCCCT--TT-GATATATTT---CACTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAAAATAATGACAGGAAGTG--CAGTGTACA
gi|133124 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-AA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133125 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATAAGAGGAAGTG--CAATGTACA
gi|133127 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTATTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133131 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTGCCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133132 : CAGAGTTATTGCCCT--TT-GGTAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133136 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTACGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133139 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAGTATAATGACAGGAAGTG--CAGT
gi|133142 : CAGAGTTATTGCCCT--TT-GATATTTTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133143 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAAAGGAAGTG--CAGTGTACA
gi|133146 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATGATGAGAGGAAGTG--TAGTGTACA
gi|133147 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133149 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTTGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133151 : CAGAGTTACTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-AA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133152 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACAaca
gi|133153 : CAGAGTTATTGCCAT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133154 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-AA-AT--TTCATC-AAGCTTCTTACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133157 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATAACAGGAAGTG--CAGTGTACA
gi|133158 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AT--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CATTGTACA
gi|133161 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGT-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133162 : CAGAGTTATTGCCCA--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133165 : CAAAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133166 : CAGAGTTATTGCCCT--TT-GATATTTTT---C--TTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133170 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGAACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133171 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTTAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133173 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTATCGGA-TG-GA-AT--TTCATC-AAGCTTCAGACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133174 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133175 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGTATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133179 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133181 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCTGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133182 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133187 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133189 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133194 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133195 : CAGAGTTATTGCCCT--TT-GATATTTTT---C--TTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAAAGGAAGTG--CAGTGTACA
gi|133198 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133199 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AAAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133201 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133204 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133205 : CAGAGTTGTTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133206 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGTGTACA
gi|133207 : CAGAGTTATCGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133210 : CAGAGTTGTTGCCCT--TT-GATAT-TTT---TTCTTGTCTGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATAGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133212 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATT-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAATGTACA
gi|133213 : CAGAGTTATTGCCCA--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATA-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CATTGTACA
gi|133215 : CAGAGTTATTGCCCT--TT-GATATAATT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTTATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAGT
gi|133217 : CAGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATC-AAGCTTCGTACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133220 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AAAATAAAATGAGAGGAAGTG--CAGTGTACA
gi|133221 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTTAAA-AGTACCGGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133225 : CAGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCAGA-TG-GA-AT--TTCATC-AAACTTAATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133254 : AGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133256 : AGAGTTATTGCCCT--TT-GATATATTT---CCCTTGTCCGGAGCATT-----AC--TTTTAA-AGTACTGGA-TG-GA-AT--TTCATC-AAACTTCATACAATGGT---AGAATATAATGACAGGAAGTG--CAATGTACA
gi|133258 : AGAGTTATTGCCCT--TT-GATAT-TTT---TTCTTGTTCGGATCATA-----AC--TTGAAA-AGTACCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
gi|133261 : GAATTGTCTCCCT--TT-ATTA-ATTTACACTTTTGTCCGGAGCATA-----AC--TCGAAA-ACTATTCAA--G-CA-AT--TTTATTGAATCTTCACACAATGAC---AGAGGACATTGAGAGGAAGTG--CATTGTATA
gi|133268 : GAATTATTCCCCT--TT-GATAT-TTT---CCCTTATTTGAAGCATA-----CC--TTGAAA-AGTTCTGAAGTG-GATGC--TT--TG-AAACTGCATACAATGAT---AGAGAGCATTGACAAGTAGTG--GACTGTTCA
gi|133300 : CCCT--TT-GATAT-TTT---TTCTTGTCCGGAGCATA-----AC--TTGAAA-AGTGCCTGA-TG-GA-AT--TTCATC-AAGCTTCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGT
gi|133318 : ttCCCT--TT-GATAT-TTT---TCCTTGTCCGGAGCATA-----AC--TTGAAA-AGTACTGGA-TG-GA-AT--TTCATT-AAACATCATACAATGGT---AGAATATAATGAGAGGAAGTG--CAGTGTACA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|133284 ): AATTATCTCCCTTTATTAAATTTACACTATTTAAAAGTTTTGAAGTGAATGCTTTGAAACTGCATACTTTTTATAGAGATTTGACAGGAAGTGGACAGTACA
Unaligned ( gi|133394 ): AAGTTCTGAAGTGAATGCTTTGAAACTGCATACAATGATAGAAAACAGTAAGTGGACAGTACA