lowQualScore                  :               1111111             0                    0      0      
lowQualScore                  :               .......             .                    .      .      
lowQualScore                  :               3333333             4                    4      4      
consensus                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
Reference ( gi|162669 )       : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162674                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAACCGAGCTAAAAT-AAATTA-GTATAA
gi|162680                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAC-AAATTA-GTATA
gi|162683                     : GAGCGGTTCATATA-------AGCGCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162685                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-CTATAA
gi|162695                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCAAAAAT-AAATTA-GTATAA
gi|162694                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATAA-GTATAA
gi|162689                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162700                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTGAAAT-AAATTG-GTATAA
gi|162703                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCGAGCTAAAAC-AAATTA-GTATAA
gi|162668                     : GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-GAATTA-GTATAA
gi|162707                     : GAGCAGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGTTAAAAT-AAATTA-GTATAA
gi|162705                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162704                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGTAATCGAACTAAAAT-AAATTA-GTATAA
gi|162711                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAA-AAATTA-GTATA
gi|162719                     : GAGCGGTTCATATC-------AGCTCTGAGCCTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162721                     : GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCGAGCTAAAAT-AACTTA-GTATAA
gi|162671                     : GAGCGATTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-ATATTA-GTATAA
gi|162670                     : GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162676                     : GAGCGGTTCATATA-------AGTTCTGAGCTTT-CATCGCAGTCGAGCTAAAAT-AAATTA-GTGTAA
gi|162743                     : GAGCGGTTCATATA-------AGCTCTGAACTTT-CATCGCAATCGAGCTAAAAT-AAATTG-ATATAA
gi|162741                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCGAGCTAAAAT-AAATTA-ATATGA
gi|162740                     : GAACGGTTCATATA-------AGCTCTGAGCTTT-CATTGCAATCGAGCTAAAAC-AAATTA-GTATAA
gi|162746                     : GAGCGGTTCATATA-------AGCTTTGAACTTT-CATTGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162745                     : GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCAAGTTAAAAT-AAATTA-GTATAA
gi|162744                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-AT-TAA
gi|162737                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-TATCGCAATCAAGTTAAAAT-AAATTA-GTATAA
gi|162712                     : GAGCAGTTCATATA-------AGCTTTGAGCTTT-CATCGCAATCGAACTAAAAT-AAATTA-GTATAA
gi|162667                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CTTCGCAATCGAGTTAAAAT-AAATTA-GTATA
gi|162753                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCCCAATAGAGCTAAAAT-AAATTA-GTATAA
gi|162682                     : GAGCGATTCGTATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAG-AAATTA-GTATAA
gi|162774                     : GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATGGCAATCGAGCTAAAAT-AAATTA-GCATAA
gi|162773                     : GAGCGGTTCATATA-------AGCTCTGAGGTTT-CATCGCAATCAAGCTAAAAT-AAATTA-GTATGA
gi|162687                     : GAGCGATTTATATA-------AGCTCTGAGCTTT-CAGCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162686                     : GAGTGGTTCATATA-------GGCTCTGAGCTTT-CATCGCAATAGAGCTAAAAT-AAATTA-GTATAA
gi|162692                     : GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAATAAAATTA-ATATAA
gi|162771                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCAAGCTAAAAT-AAATTA-GTAAAA
gi|162749                     : GAACGGTACATATA-------AGCTCTGAGCTTT-CATTGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162696                     : GAGTGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCGAGCTAAAAT-AAAATA-GTATAA
gi|162778                     : GAGCGGTTCATATA-------AGCTTTGGGCTTT-CATCGCAATCAAGCTAAAAT-AAATTA-GTAT
gi|162787                     : GAGCGGTTCATGTA-------AGCTCTGAGCTTT-CATCACAATCGAGTTAAAAT-AAATTA-GCATAA
gi|162789                     : GAGCAGTTCATATA-------AGCTCTGAGCTTT-CATTGCAATCAAGCTAAAAT-AAATTA-GTATGA
gi|162708                     : GAGCGATTTATATA-------AGCTCTGAGCTTT-CATCGCAATCAAGCTAAAAT-AAATTG-GTATAA
gi|162795                     : GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCGAGCTAAAAG-AAATGA-GTATAA
gi|162752                     : GAGCGTTTCATATA-------AGCTCTGAGCTTT-CACCGCAATCGAGCTAAAAT-AAATGA-GTATAA
gi|162713                     : GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCTAGCTAAAAT-CAATTA-GTATAA
gi|162714                     : GAGTGGTTCATATA-------AGCTCGGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTAAAA
gi|162723                     : GAGTGGTTCATATA-------AGCCCTGAGCTTT-CATAGCAATCGAGCTAAAAT-AGATTA-GTATAA
gi|162769                     : GAGCGGTTGATATA-------AGCTCTGAGCTTC-CATCGCAATCGAGCT-AAAT-AAATTA-GTATAA
gi|162726                     : GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAGTCGAGCTAAAAT-AAATCA-GTTTAA
gi|162729                     : GAGCGGTTCATATA-------AGTTTTAAGCTTT-CATCGCAATCTAGCTAAAAT-AAATTA-GTATAA
gi|162681                     : GAGCGGTTCATATA-------AACTCTGAGCTTT-CTTTGTAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162742                     : GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATC-AGCTAAAAG-AAATTA-GTATAA
gi|162677                     : GAGTGATCCATATA-------AGCTCTGAGCTTT-CATCGTAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162755                     : GAGTGGTTCATATA-------AGCTCTGAGCTTT-TATCGCAATCAAGCTTAAAT-AAATTA-GTATA
gi|162754                     : GAGCGATCCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTC-GTAAAA
gi|162699                     : GAGCGGGTCGTATA-------AGCTCTGAGCTTT-CTTCGCAATCGAGTTAAAAT-AAATTA-GTATAA
gi|162672                     : GAGCCGTTCATATA-------AGCTCCGAGCTTC-CTTCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162760                     : GAGCTATTCATATA-------AGCTCTGAGCTTT-CATTGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162766                     : GAGCGATTCATATA-------AGCTCTGAGCTCT-CATCGCAATCGAGCCGAAAG-AAATTA-GTATAA
gi|162772                     : GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCCATCAAGCTCAAAT-AAATTA-GTATA
gi|162684                     : GAGAGATTCATATA-------AGCTCTGAGCTTC-CATCGCAACTGAGCTAAAAT-AAATTA-GTATAA
gi|162765                     : GAGCGGTTCATATA-------AGCTCTGAGCTTG-CATCGCAATCAAACT-AAAT-AAATTA-GTATAA
gi|162716                     : GAGCGGTTCACGTA-------AGCTCTGAGCTTT-CTTCACAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162776                     : GAGCGATTTATATA-------AGCTCTGAGCTTT-CATCGTAATCGAGCTTAAAT-AAATTA-GTACAA
gi|162798                     : GAATGGTTCATATA-------AGCTCTGAGTTTT-CATCGCAATCAAACTAAAAT-AAATTG-GTATAA
gi|162796                     : GAGTGGTTCATATA-------AACTCCGAGCTTT-CATCGCAATCGAGTT-AAAT-AAATTA-GTATAA
gi|162791                     : GAGTGGTTCATATA-------GACTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-
gi|162734                     : GAGCGGTTCACATA-------AACTCGGAGCTTT-CTTCGCAATCGAGCTAAAAT-GAATTA-GTATAA
gi|162784                     : GAGCGATTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGTTAAAAT-AAAT
gi|162792                     : GAGCGGTTTATATA-------AGCTCTGAGCTTT-TCTCGTAATCGAGCTAAAAT-ATATTA-GTATAA
gi|162739                     : GGGCGGTTCATATA-------AGCTCTCAGCTTT-CTTCGCAATTGAACTAAAAT-AAATTA-GTATAA
gi|162732                     : GAGCGGTTCATATA-------AGCTCTGAGCTGT-T-TCGCAACTGAGCTAAAAT-AAATTA-GTATAA
gi|162786                     : GAGTGTTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCAAGCTAAACT-ATATTA-GTATAA
gi|162782                     : GAGCGGTTGATATA-------AGCTCTGAGCTTT-CTTTGCAATCAAGCTGAAAT-AAATTA-GTATGA
gi|162788                     : GAGCGGTTCATATA-------AGCTCTGAGCTTT-CTTCACAATCGAGGTGAAAT-AAATTATGTATA
gi|162761                     : GAGTGATTCATATA-------AGCTCTGAACTTT-CATTGCAATCGAGCTAACAT-AAATAA-GTATAA
gi|162701                     : GAGTGGTTCACATA-------AGCCTTGAGCTTT-CTTCGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162768                     : GAGTGGTTCATATA-------AGCTTTGAGTTTT-CTTCGCAATCAAGCTAAAAT-AAATTA-
gi|162759                     : GAGCAGTTCATATA-------AGCTCTGAGTTTA-CTTTGCAATCAATCTAAAAT-GAATTA-GTATAA
gi|162777                     : GAGTGGTTCATATA-------AATTTTGAGCTTTGTAT-GCAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162748                     : GAGTGATTCATATA-------AGCTTTGAACTTT-CTTTGCAATCAAGCTAAAAT-TAACTA-GTATAA
gi|162775                     : GAGTGAGTCATATA-------AGCTCTGAGTTTT-TTTCACAATCAAGCTAAAAT-AAATTA-GTTTAA
gi|162727                     : GAGTGGTTCATATT-------GGTTCTAAGCTTA-CTTCGCAATCAAGCTAAAAT-AAATGT-GTATAA
gi|162679                     : GAGTGATTCATATA-------GTTTCAGAGCTTA-CTTCGCAATCAAGCTAAAAT-AAATTA-ATA
gi|162728                     : GAGTGATTCATATA-------ATATTTCAGCTTA-CTTCGCAATCAAGCTAAAAT-AAACTA-ATATAA
gi|162967                     :  AGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATCA-GTATAA
gi|162968                     :  AGCGGTTCATATA-------AGCTCTGAGCTTT-TATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162964                     :  AGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162975                     :  AGCGGTTCGTATA-------AGCTCTGAGCTTT-CATCGCAATTGAGCTAAAAT-AAATTA-GTATAA
gi|162979                     :  AGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTT-GTATGA
gi|162974                     :  AGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCAAGCTTAAAT-AAATTA-GTATAA
gi|162973                     :  AGTGGTTCATATA-------AGCTCTGAACTTT-CATCGCAATCAAGCTAAAAT-AAATTA-GTAT
gi|162969                     :  AGTGGTTCATATAGGCTCTGAGCTCTGAGCTTA-CTTCACAATCGAGCTAAAAT-AAATCA-GTATAA
gi|163019                     :   GCGGTTCATATA-------AGCTCTGAGCTTC-CATCGTAATCAAGCTAAAAT-AAATTA-GTATAA
gi|163029                     :     GGTTTATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162770                     :     GGTTCATATA-------AGCTCTGAGCTTT-CATCGCGGTCGAGCTAAAAT-AAATTA-ATATAA
gi|163041                     :   gattTTTATGTA-------AGCTCTGAGCTTA-CTTCTCAATTGAGCTAAAAT-AAATTA-GTATAA
gi|163036                     :       TTCACATA-------AGCTCTGAGCTTA-CTTCACAATCAAGCTAAAAT-AAAATA-GTATAA
gi|163059                     :       aTCATATA-------AGATCTGAGCTTT-CTTCGCAGTCGAGCTAAAAT-AAATTA-GTATA





Alignments
lowQualScore                  :                   1111111             0                    0      0      
lowQualScore                  :                   .......             .                    .      .      
lowQualScore                  :                   3333333             4                    4      4      
consensus                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
Reference ( family-107 )      :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162667                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CTTCGCAATCGAGTTAAAAT-AAATTA-GTATA
gi|162668                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-GAATTA-GTATAA
gi|162669                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162670                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162671                     :     GAGCGATTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-ATATTA-GTATAA
gi|162672                     :     GAGCCGTTCATATA-------AGCTCCGAGCTTC-CTTCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162674                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAACCGAGCTAAAAT-AAATTA-GTATAA
gi|162676                     :     GAGCGGTTCATATA-------AGTTCTGAGCTTT-CATCGCAGTCGAGCTAAAAT-AAATTA-GTGTAA
gi|162677                     :     GAGTGATCCATATA-------AGCTCTGAGCTTT-CATCGTAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162679                     :     GAGTGATTCATATA-------GTTTCAGAGCTTA-CTTCGCAATCAAGCTAAAAT-AAATTA-ATA
gi|162680                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAC-AAATTA-GTATA
gi|162681                     :     GAGCGGTTCATATA-------AACTCTGAGCTTT-CTTTGTAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162682                     :     GAGCGATTCGTATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAG-AAATTA-GTATAA
gi|162683                     :     GAGCGGTTCATATA-------AGCGCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162684                     :     GAGAGATTCATATA-------AGCTCTGAGCTTC-CATCGCAACTGAGCTAAAAT-AAATTA-GTATAA
gi|162685                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-CTATAA
gi|162686                     :     GAGTGGTTCATATA-------GGCTCTGAGCTTT-CATCGCAATAGAGCTAAAAT-AAATTA-GTATAA
gi|162687                     :     GAGCGATTTATATA-------AGCTCTGAGCTTT-CAGCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162689                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162692                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAATAAAATTA-ATATAA
gi|162694                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATAA-GTATAA
gi|162695                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCAAAAAT-AAATTA-GTATAA
gi|162696                     :     GAGTGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCGAGCTAAAAT-AAAATA-GTATAA
gi|162699                     :     GAGCGGGTCGTATA-------AGCTCTGAGCTTT-CTTCGCAATCGAGTTAAAAT-AAATTA-GTATAA
gi|162700                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTGAAAT-AAATTG-GTATAA
gi|162701                     :     GAGTGGTTCACATA-------AGCCTTGAGCTTT-CTTCGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162703                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCGAGCTAAAAC-AAATTA-GTATAA
gi|162704                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGTAATCGAACTAAAAT-AAATTA-GTATAA
gi|162705                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162707                     :     GAGCAGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGTTAAAAT-AAATTA-GTATAA
gi|162708                     :     GAGCGATTTATATA-------AGCTCTGAGCTTT-CATCGCAATCAAGCTAAAAT-AAATTG-GTATAA
gi|162711                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAA-AAATTA-GTATA
gi|162712                     :     GAGCAGTTCATATA-------AGCTTTGAGCTTT-CATCGCAATCGAACTAAAAT-AAATTA-GTATAA
gi|162713                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCTAGCTAAAAT-CAATTA-GTATAA
gi|162714                     :     GAGTGGTTCATATA-------AGCTCGGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTAAAA
gi|162716                     :     GAGCGGTTCACGTA-------AGCTCTGAGCTTT-CTTCACAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162719                     :     GAGCGGTTCATATC-------AGCTCTGAGCCTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162721                     :     GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCGAGCTAAAAT-AACTTA-GTATAA
gi|162723                     :     GAGTGGTTCATATA-------AGCCCTGAGCTTT-CATAGCAATCGAGCTAAAAT-AGATTA-GTATAA
gi|162726                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAGTCGAGCTAAAAT-AAATCA-GTTTAA
gi|162727                     :     GAGTGGTTCATATT-------GGTTCTAAGCTTA-CTTCGCAATCAAGCTAAAAT-AAATGT-GTATAA
gi|162728                     :     GAGTGATTCATATA-------ATATTTCAGCTTA-CTTCGCAATCAAGCTAAAAT-AAACTA-ATATAA
gi|162729                     :     GAGCGGTTCATATA-------AGTTTTAAGCTTT-CATCGCAATCTAGCTAAAAT-AAATTA-GTATAA
gi|162732                     :     GAGCGGTTCATATA-------AGCTCTGAGCTGT-T-TCGCAACTGAGCTAAAAT-AAATTA-GTATAA
gi|162734                     :     GAGCGGTTCACATA-------AACTCGGAGCTTT-CTTCGCAATCGAGCTAAAAT-GAATTA-GTATAA
gi|162737                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-TATCGCAATCAAGTTAAAAT-AAATTA-GTATAA
gi|162739                     :     GGGCGGTTCATATA-------AGCTCTCAGCTTT-CTTCGCAATTGAACTAAAAT-AAATTA-GTATAA
gi|162740                     :     GAACGGTTCATATA-------AGCTCTGAGCTTT-CATTGCAATCGAGCTAAAAC-AAATTA-GTATAA
gi|162741                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCGAGCTAAAAT-AAATTA-ATATGA
gi|162742                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATC-AGCTAAAAG-AAATTA-GTATAA
gi|162743                     :     GAGCGGTTCATATA-------AGCTCTGAACTTT-CATCGCAATCGAGCTAAAAT-AAATTG-ATATAA
gi|162744                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-AT-TAA
gi|162745                     :     GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCAAGTTAAAAT-AAATTA-GTATAA
gi|162746                     :     GAGCGGTTCATATA-------AGCTTTGAACTTT-CATTGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162748                     :     GAGTGATTCATATA-------AGCTTTGAACTTT-CTTTGCAATCAAGCTAAAAT-TAACTA-GTATAA
gi|162749                     :     GAACGGTACATATA-------AGCTCTGAGCTTT-CATTGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162752                     :     GAGCGTTTCATATA-------AGCTCTGAGCTTT-CACCGCAATCGAGCTAAAAT-AAATGA-GTATAA
gi|162753                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCCCAATAGAGCTAAAAT-AAATTA-GTATAA
gi|162754                     :     GAGCGATCCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTC-GTAAAA
gi|162755                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-TATCGCAATCAAGCTTAAAT-AAATTA-GTATA
gi|162759                     :     GAGCAGTTCATATA-------AGCTCTGAGTTTA-CTTTGCAATCAATCTAAAAT-GAATTA-GTATAA
gi|162760                     :     GAGCTATTCATATA-------AGCTCTGAGCTTT-CATTGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162761                     :     GAGTGATTCATATA-------AGCTCTGAACTTT-CATTGCAATCGAGCTAACAT-AAATAA-GTATAA
gi|162765                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTG-CATCGCAATCAAACT-AAAT-AAATTA-GTATAA
gi|162766                     :     GAGCGATTCATATA-------AGCTCTGAGCTCT-CATCGCAATCGAGCCGAAAG-AAATTA-GTATAA
gi|162768                     :     GAGTGGTTCATATA-------AGCTTTGAGTTTT-CTTCGCAATCAAGCTAAAAT-AAATTA-
gi|162769                     :     GAGCGGTTGATATA-------AGCTCTGAGCTTC-CATCGCAATCGAGCT-AAAT-AAATTA-GTATAA
gi|162770                     :         GGTTCATATA-------AGCTCTGAGCTTT-CATCGCGGTCGAGCTAAAAT-AAATTA-ATATAA
gi|162771                     : gattGAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCAAGCTAAAAT-AAATTA-GTAAAA
gi|162772                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCCATCAAGCTCAAAT-AAATTA-GTATA
gi|162773                     :     GAGCGGTTCATATA-------AGCTCTGAGGTTT-CATCGCAATCAAGCTAAAAT-AAATTA-GTATGA
gi|162774                     :     GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATGGCAATCGAGCTAAAAT-AAATTA-GCATAA
gi|162775                     :     GAGTGAGTCATATA-------AGCTCTGAGTTTT-TTTCACAATCAAGCTAAAAT-AAATTA-GTTTAA
gi|162776                     :     GAGCGATTTATATA-------AGCTCTGAGCTTT-CATCGTAATCGAGCTTAAAT-AAATTA-GTACAA
gi|162777                     :     GAGTGGTTCATATA-------AATTTTGAGCTTTGTAT-GCAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162778                     :     GAGCGGTTCATATA-------AGCTTTGGGCTTT-CATCGCAATCAAGCTAAAAT-AAATTA-GTAT
gi|162782                     :     GAGCGGTTGATATA-------AGCTCTGAGCTTT-CTTTGCAATCAAGCTGAAAT-AAATTA-GTATGA
gi|162784                     :     GAGCGATTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGTTAAAAT-AAAT
gi|162786                     :     GAGTGTTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCAAGCTAAACT-ATATTA-GTATAA
gi|162787                     :     GAGCGGTTCATGTA-------AGCTCTGAGCTTT-CATCACAATCGAGTTAAAAT-AAATTA-GCATAA
gi|162788                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CTTCACAATCGAGGTGAAAT-AAATTATGTATA
gi|162789                     :     GAGCAGTTCATATA-------AGCTCTGAGCTTT-CATTGCAATCAAGCTAAAAT-AAATTA-GTATGA
gi|162791                     :     GAGTGGTTCATATA-------GACTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-
gi|162792                     :     GAGCGGTTTATATA-------AGCTCTGAGCTTT-TCTCGTAATCGAGCTAAAAT-ATATTA-GTATAA
gi|162795                     :     GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCGAGCTAAAAG-AAATGA-GTATAA
gi|162796                     :     GAGTGGTTCATATA-------AACTCCGAGCTTT-CATCGCAATCGAGTT-AAAT-AAATTA-GTATAA
gi|162798                     :     GAATGGTTCATATA-------AGCTCTGAGTTTT-CATCGCAATCAAACTAAAAT-AAATTG-GTATAA
gi|162964                     :      AGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162967                     :      AGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATCA-GTATAA
gi|162968                     :      AGCGGTTCATATA-------AGCTCTGAGCTTT-TATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162969                     :      AGTGGTTCATATAGGCTCTGAGCTCTGAGCTTA-CTTCACAATCGAGCTAAAAT-AAATCA-GTATAA
gi|162973                     :      AGTGGTTCATATA-------AGCTCTGAACTTT-CATCGCAATCAAGCTAAAAT-AAATTA-GTAT
gi|162974                     :      AGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCAAGCTTAAAT-AAATTA-GTATAA
gi|162975                     :      AGCGGTTCGTATA-------AGCTCTGAGCTTT-CATCGCAATTGAGCTAAAAT-AAATTA-GTATAA
gi|162979                     :      AGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTT-GTATGA
gi|163019                     :       GCGGTTCATATA-------AGCTCTGAGCTTC-CATCGTAATCAAGCTAAAAT-AAATTA-GTATAA
gi|163029                     :         GGTTTATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|163036                     :           TTCACATA-------AGCTCTGAGCTTA-CTTCACAATCAAGCTAAAAT-AAAATA-GTATAA
gi|163041                     :          aTTTATGTA-------AGCTCTGAGCTTA-CTTCTCAATTGAGCTAAAAT-AAATTA-GTATAA
gi|163059                     :            TCATATA-------AGATCTGAGCTTT-CTTCGCAGTCGAGCTAAAAT-AAATTA-GTATA





Alignments
lowQualScore                  :                   1111111             0                    0      0      
lowQualScore                  :                   .......             .                    .      .      
lowQualScore                  :                   3333333             4                    4      4      
consensus                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
Reference ( family-107 )      :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162667                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CTTCGCAATCGAGTTAAAAT-AAATTA-GTATA
gi|162668                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-GAATTA-GTATAA
gi|162669                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162670                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162671                     :     GAGCGATTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-ATATTA-GTATAA
gi|162672                     :     GAGCCGTTCATATA-------AGCTCCGAGCTTC-CTTCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162674                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAACCGAGCTAAAAT-AAATTA-GTATAA
gi|162676                     :     GAGCGGTTCATATA-------AGTTCTGAGCTTT-CATCGCAGTCGAGCTAAAAT-AAATTA-GTGTAA
gi|162677                     :     GAGTGATCCATATA-------AGCTCTGAGCTTT-CATCGTAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162679                     :     GAGTGATTCATATA-------GTTTCAGAGCTTA-CTTCGCAATCAAGCTAAAAT-AAATTA-ATA
gi|162680                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAC-AAATTA-GTATA
gi|162681                     :     GAGCGGTTCATATA-------AACTCTGAGCTTT-CTTTGTAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162682                     :     GAGCGATTCGTATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAG-AAATTA-GTATAA
gi|162683                     :     GAGCGGTTCATATA-------AGCGCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162684                     :     GAGAGATTCATATA-------AGCTCTGAGCTTC-CATCGCAACTGAGCTAAAAT-AAATTA-GTATAA
gi|162685                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-CTATAA
gi|162686                     :     GAGTGGTTCATATA-------GGCTCTGAGCTTT-CATCGCAATAGAGCTAAAAT-AAATTA-GTATAA
gi|162687                     :     GAGCGATTTATATA-------AGCTCTGAGCTTT-CAGCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162689                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162692                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAATAAAATTA-ATATAA
gi|162694                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATAA-GTATAA
gi|162695                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCAAAAAT-AAATTA-GTATAA
gi|162696                     :     GAGTGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCGAGCTAAAAT-AAAATA-GTATAA
gi|162699                     :     GAGCGGGTCGTATA-------AGCTCTGAGCTTT-CTTCGCAATCGAGTTAAAAT-AAATTA-GTATAA
gi|162700                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTGAAAT-AAATTG-GTATAA
gi|162701                     :     GAGTGGTTCACATA-------AGCCTTGAGCTTT-CTTCGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162703                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCGAGCTAAAAC-AAATTA-GTATAA
gi|162704                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGTAATCGAACTAAAAT-AAATTA-GTATAA
gi|162705                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162707                     :     GAGCAGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGTTAAAAT-AAATTA-GTATAA
gi|162708                     :     GAGCGATTTATATA-------AGCTCTGAGCTTT-CATCGCAATCAAGCTAAAAT-AAATTG-GTATAA
gi|162711                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAA-AAATTA-GTATA
gi|162712                     :     GAGCAGTTCATATA-------AGCTTTGAGCTTT-CATCGCAATCGAACTAAAAT-AAATTA-GTATAA
gi|162713                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCTAGCTAAAAT-CAATTA-GTATAA
gi|162714                     :     GAGTGGTTCATATA-------AGCTCGGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTAAAA
gi|162716                     :     GAGCGGTTCACGTA-------AGCTCTGAGCTTT-CTTCACAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162719                     :     GAGCGGTTCATATC-------AGCTCTGAGCCTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162721                     :     GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCGAGCTAAAAT-AACTTA-GTATAA
gi|162723                     :     GAGTGGTTCATATA-------AGCCCTGAGCTTT-CATAGCAATCGAGCTAAAAT-AGATTA-GTATAA
gi|162726                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAGTCGAGCTAAAAT-AAATCA-GTTTAA
gi|162727                     :     GAGTGGTTCATATT-------GGTTCTAAGCTTA-CTTCGCAATCAAGCTAAAAT-AAATGT-GTATAA
gi|162728                     :     GAGTGATTCATATA-------ATATTTCAGCTTA-CTTCGCAATCAAGCTAAAAT-AAACTA-ATATAA
gi|162729                     :     GAGCGGTTCATATA-------AGTTTTAAGCTTT-CATCGCAATCTAGCTAAAAT-AAATTA-GTATAA
gi|162732                     :     GAGCGGTTCATATA-------AGCTCTGAGCTGT-T-TCGCAACTGAGCTAAAAT-AAATTA-GTATAA
gi|162734                     :     GAGCGGTTCACATA-------AACTCGGAGCTTT-CTTCGCAATCGAGCTAAAAT-GAATTA-GTATAA
gi|162737                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-TATCGCAATCAAGTTAAAAT-AAATTA-GTATAA
gi|162739                     :     GGGCGGTTCATATA-------AGCTCTCAGCTTT-CTTCGCAATTGAACTAAAAT-AAATTA-GTATAA
gi|162740                     :     GAACGGTTCATATA-------AGCTCTGAGCTTT-CATTGCAATCGAGCTAAAAC-AAATTA-GTATAA
gi|162741                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCGAGCTAAAAT-AAATTA-ATATGA
gi|162742                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATC-AGCTAAAAG-AAATTA-GTATAA
gi|162743                     :     GAGCGGTTCATATA-------AGCTCTGAACTTT-CATCGCAATCGAGCTAAAAT-AAATTG-ATATAA
gi|162744                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-AT-TAA
gi|162745                     :     GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCAAGTTAAAAT-AAATTA-GTATAA
gi|162746                     :     GAGCGGTTCATATA-------AGCTTTGAACTTT-CATTGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162748                     :     GAGTGATTCATATA-------AGCTTTGAACTTT-CTTTGCAATCAAGCTAAAAT-TAACTA-GTATAA
gi|162749                     :     GAACGGTACATATA-------AGCTCTGAGCTTT-CATTGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162752                     :     GAGCGTTTCATATA-------AGCTCTGAGCTTT-CACCGCAATCGAGCTAAAAT-AAATGA-GTATAA
gi|162753                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCCCAATAGAGCTAAAAT-AAATTA-GTATAA
gi|162754                     :     GAGCGATCCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTC-GTAAAA
gi|162755                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-TATCGCAATCAAGCTTAAAT-AAATTA-GTATA
gi|162759                     :     GAGCAGTTCATATA-------AGCTCTGAGTTTA-CTTTGCAATCAATCTAAAAT-GAATTA-GTATAA
gi|162760                     :     GAGCTATTCATATA-------AGCTCTGAGCTTT-CATTGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162761                     :     GAGTGATTCATATA-------AGCTCTGAACTTT-CATTGCAATCGAGCTAACAT-AAATAA-GTATAA
gi|162765                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTG-CATCGCAATCAAACT-AAAT-AAATTA-GTATAA
gi|162766                     :     GAGCGATTCATATA-------AGCTCTGAGCTCT-CATCGCAATCGAGCCGAAAG-AAATTA-GTATAA
gi|162768                     :     GAGTGGTTCATATA-------AGCTTTGAGTTTT-CTTCGCAATCAAGCTAAAAT-AAATTA-
gi|162769                     :     GAGCGGTTGATATA-------AGCTCTGAGCTTC-CATCGCAATCGAGCT-AAAT-AAATTA-GTATAA
gi|162770                     :         GGTTCATATA-------AGCTCTGAGCTTT-CATCGCGGTCGAGCTAAAAT-AAATTA-ATATAA
gi|162771                     : gattGAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCAAGCTAAAAT-AAATTA-GTAAAA
gi|162772                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCCATCAAGCTCAAAT-AAATTA-GTATA
gi|162773                     :     GAGCGGTTCATATA-------AGCTCTGAGGTTT-CATCGCAATCAAGCTAAAAT-AAATTA-GTATGA
gi|162774                     :     GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATGGCAATCGAGCTAAAAT-AAATTA-GCATAA
gi|162775                     :     GAGTGAGTCATATA-------AGCTCTGAGTTTT-TTTCACAATCAAGCTAAAAT-AAATTA-GTTTAA
gi|162776                     :     GAGCGATTTATATA-------AGCTCTGAGCTTT-CATCGTAATCGAGCTTAAAT-AAATTA-GTACAA
gi|162777                     :     GAGTGGTTCATATA-------AATTTTGAGCTTTGTAT-GCAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162778                     :     GAGCGGTTCATATA-------AGCTTTGGGCTTT-CATCGCAATCAAGCTAAAAT-AAATTA-GTAT
gi|162782                     :     GAGCGGTTGATATA-------AGCTCTGAGCTTT-CTTTGCAATCAAGCTGAAAT-AAATTA-GTATGA
gi|162784                     :     GAGCGATTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGTTAAAAT-AAAT
gi|162786                     :     GAGTGTTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCAAGCTAAACT-ATATTA-GTATAA
gi|162787                     :     GAGCGGTTCATGTA-------AGCTCTGAGCTTT-CATCACAATCGAGTTAAAAT-AAATTA-GCATAA
gi|162788                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CTTCACAATCGAGGTGAAAT-AAATTATGTATA
gi|162789                     :     GAGCAGTTCATATA-------AGCTCTGAGCTTT-CATTGCAATCAAGCTAAAAT-AAATTA-GTATGA
gi|162791                     :     GAGTGGTTCATATA-------GACTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-
gi|162792                     :     GAGCGGTTTATATA-------AGCTCTGAGCTTT-TCTCGTAATCGAGCTAAAAT-ATATTA-GTATAA
gi|162795                     :     GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCGAGCTAAAAG-AAATGA-GTATAA
gi|162796                     :     GAGTGGTTCATATA-------AACTCCGAGCTTT-CATCGCAATCGAGTT-AAAT-AAATTA-GTATAA
gi|162798                     :     GAATGGTTCATATA-------AGCTCTGAGTTTT-CATCGCAATCAAACTAAAAT-AAATTG-GTATAA
gi|162964                     :      AGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162967                     :      AGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATCA-GTATAA
gi|162968                     :      AGCGGTTCATATA-------AGCTCTGAGCTTT-TATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162969                     :      AGTGGTTCATATAGGCTCTGAGCTCTGAGCTTA-CTTCACAATCGAGCTAAAAT-AAATCA-GTATAA
gi|162973                     :      AGTGGTTCATATA-------AGCTCTGAACTTT-CATCGCAATCAAGCTAAAAT-AAATTA-GTAT
gi|162974                     :      AGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCAAGCTTAAAT-AAATTA-GTATAA
gi|162975                     :      AGCGGTTCGTATA-------AGCTCTGAGCTTT-CATCGCAATTGAGCTAAAAT-AAATTA-GTATAA
gi|162979                     :      AGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTT-GTATGA
gi|163019                     :       GCGGTTCATATA-------AGCTCTGAGCTTC-CATCGTAATCAAGCTAAAAT-AAATTA-GTATAA
gi|163029                     :         GGTTTATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|163036                     :           TTCACATA-------AGCTCTGAGCTTA-CTTCACAATCAAGCTAAAAT-AAAATA-GTATAA
gi|163041                     :          aTTTATGTA-------AGCTCTGAGCTTA-CTTCTCAATTGAGCTAAAAT-AAATTA-GTATAA
gi|163059                     :            TCATATA-------AGATCTGAGCTTT-CTTCGCAGTCGAGCTAAAAT-AAATTA-GTATA


blockSeqs                     :                   GGCTCTG
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blockSeqCons                  :     
originalCons                  :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
finalCons                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA





Alignments
lowQualScore                  :                   1111111             0                    0      0      
lowQualScore                  :                   .......             .                    .      .      
lowQualScore                  :                   3333333             4                    4      4      
consensus                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
Reference ( family-107 )      :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162667                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CTTCGCAATCGAGTTAAAAT-AAATTA-GTATA
gi|162668                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-GAATTA-GTATAA
gi|162669                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162670                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162671                     :     GAGCGATTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-ATATTA-GTATAA
gi|162672                     :     GAGCCGTTCATATA-------AGCTCCGAGCTTC-CTTCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162674                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAACCGAGCTAAAAT-AAATTA-GTATAA
gi|162676                     :     GAGCGGTTCATATA-------AGTTCTGAGCTTT-CATCGCAGTCGAGCTAAAAT-AAATTA-GTGTAA
gi|162677                     :     GAGTGATCCATATA-------AGCTCTGAGCTTT-CATCGTAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162679                     :     GAGTGATTCATATA-------GTTTCAGAGCTTA-CTTCGCAATCAAGCTAAAAT-AAATTA-ATA
gi|162680                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAC-AAATTA-GTATA
gi|162681                     :     GAGCGGTTCATATA-------AACTCTGAGCTTT-CTTTGTAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162682                     :     GAGCGATTCGTATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAG-AAATTA-GTATAA
gi|162683                     :     GAGCGGTTCATATA-------AGCGCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162684                     :     GAGAGATTCATATA-------AGCTCTGAGCTTC-CATCGCAACTGAGCTAAAAT-AAATTA-GTATAA
gi|162685                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-CTATAA
gi|162686                     :     GAGTGGTTCATATA-------GGCTCTGAGCTTT-CATCGCAATAGAGCTAAAAT-AAATTA-GTATAA
gi|162687                     :     GAGCGATTTATATA-------AGCTCTGAGCTTT-CAGCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162689                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162692                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAATAAAATTA-ATATAA
gi|162694                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATAA-GTATAA
gi|162695                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCAAAAAT-AAATTA-GTATAA
gi|162696                     :     GAGTGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCGAGCTAAAAT-AAAATA-GTATAA
gi|162699                     :     GAGCGGGTCGTATA-------AGCTCTGAGCTTT-CTTCGCAATCGAGTTAAAAT-AAATTA-GTATAA
gi|162700                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTGAAAT-AAATTG-GTATAA
gi|162701                     :     GAGTGGTTCACATA-------AGCCTTGAGCTTT-CTTCGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162703                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCGAGCTAAAAC-AAATTA-GTATAA
gi|162704                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGTAATCGAACTAAAAT-AAATTA-GTATAA
gi|162705                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162707                     :     GAGCAGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGTTAAAAT-AAATTA-GTATAA
gi|162708                     :     GAGCGATTTATATA-------AGCTCTGAGCTTT-CATCGCAATCAAGCTAAAAT-AAATTG-GTATAA
gi|162711                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAA-AAATTA-GTATA
gi|162712                     :     GAGCAGTTCATATA-------AGCTTTGAGCTTT-CATCGCAATCGAACTAAAAT-AAATTA-GTATAA
gi|162713                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCTAGCTAAAAT-CAATTA-GTATAA
gi|162714                     :     GAGTGGTTCATATA-------AGCTCGGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTAAAA
gi|162716                     :     GAGCGGTTCACGTA-------AGCTCTGAGCTTT-CTTCACAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162719                     :     GAGCGGTTCATATC-------AGCTCTGAGCCTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162721                     :     GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCGAGCTAAAAT-AACTTA-GTATAA
gi|162723                     :     GAGTGGTTCATATA-------AGCCCTGAGCTTT-CATAGCAATCGAGCTAAAAT-AGATTA-GTATAA
gi|162726                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAGTCGAGCTAAAAT-AAATCA-GTTTAA
gi|162727                     :     GAGTGGTTCATATT-------GGTTCTAAGCTTA-CTTCGCAATCAAGCTAAAAT-AAATGT-GTATAA
gi|162728                     :     GAGTGATTCATATA-------ATATTTCAGCTTA-CTTCGCAATCAAGCTAAAAT-AAACTA-ATATAA
gi|162729                     :     GAGCGGTTCATATA-------AGTTTTAAGCTTT-CATCGCAATCTAGCTAAAAT-AAATTA-GTATAA
gi|162732                     :     GAGCGGTTCATATA-------AGCTCTGAGCTGT-T-TCGCAACTGAGCTAAAAT-AAATTA-GTATAA
gi|162734                     :     GAGCGGTTCACATA-------AACTCGGAGCTTT-CTTCGCAATCGAGCTAAAAT-GAATTA-GTATAA
gi|162737                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-TATCGCAATCAAGTTAAAAT-AAATTA-GTATAA
gi|162739                     :     GGGCGGTTCATATA-------AGCTCTCAGCTTT-CTTCGCAATTGAACTAAAAT-AAATTA-GTATAA
gi|162740                     :     GAACGGTTCATATA-------AGCTCTGAGCTTT-CATTGCAATCGAGCTAAAAC-AAATTA-GTATAA
gi|162741                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCGAGCTAAAAT-AAATTA-ATATGA
gi|162742                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATC-AGCTAAAAG-AAATTA-GTATAA
gi|162743                     :     GAGCGGTTCATATA-------AGCTCTGAACTTT-CATCGCAATCGAGCTAAAAT-AAATTG-ATATAA
gi|162744                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-AT-TAA
gi|162745                     :     GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCAAGTTAAAAT-AAATTA-GTATAA
gi|162746                     :     GAGCGGTTCATATA-------AGCTTTGAACTTT-CATTGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162748                     :     GAGTGATTCATATA-------AGCTTTGAACTTT-CTTTGCAATCAAGCTAAAAT-TAACTA-GTATAA
gi|162749                     :     GAACGGTACATATA-------AGCTCTGAGCTTT-CATTGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162752                     :     GAGCGTTTCATATA-------AGCTCTGAGCTTT-CACCGCAATCGAGCTAAAAT-AAATGA-GTATAA
gi|162753                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCCCAATAGAGCTAAAAT-AAATTA-GTATAA
gi|162754                     :     GAGCGATCCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTC-GTAAAA
gi|162755                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-TATCGCAATCAAGCTTAAAT-AAATTA-GTATA
gi|162759                     :     GAGCAGTTCATATA-------AGCTCTGAGTTTA-CTTTGCAATCAATCTAAAAT-GAATTA-GTATAA
gi|162760                     :     GAGCTATTCATATA-------AGCTCTGAGCTTT-CATTGCAATCGAGCTTAAAT-AAATTA-GTATAA
gi|162761                     :     GAGTGATTCATATA-------AGCTCTGAACTTT-CATTGCAATCGAGCTAACAT-AAATAA-GTATAA
gi|162765                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTG-CATCGCAATCAAACT-AAAT-AAATTA-GTATAA
gi|162766                     :     GAGCGATTCATATA-------AGCTCTGAGCTCT-CATCGCAATCGAGCCGAAAG-AAATTA-GTATAA
gi|162768                     :     GAGTGGTTCATATA-------AGCTTTGAGTTTT-CTTCGCAATCAAGCTAAAAT-AAATTA-
gi|162769                     :     GAGCGGTTGATATA-------AGCTCTGAGCTTC-CATCGCAATCGAGCT-AAAT-AAATTA-GTATAA
gi|162770                     :         GGTTCATATA-------AGCTCTGAGCTTT-CATCGCGGTCGAGCTAAAAT-AAATTA-ATATAA
gi|162771                     : gattGAGCGGTTCATATA-------AGCTCTGAGCTTT-CATCACAATCAAGCTAAAAT-AAATTA-GTAAAA
gi|162772                     :     GAGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCCATCAAGCTCAAAT-AAATTA-GTATA
gi|162773                     :     GAGCGGTTCATATA-------AGCTCTGAGGTTT-CATCGCAATCAAGCTAAAAT-AAATTA-GTATGA
gi|162774                     :     GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATGGCAATCGAGCTAAAAT-AAATTA-GCATAA
gi|162775                     :     GAGTGAGTCATATA-------AGCTCTGAGTTTT-TTTCACAATCAAGCTAAAAT-AAATTA-GTTTAA
gi|162776                     :     GAGCGATTTATATA-------AGCTCTGAGCTTT-CATCGTAATCGAGCTTAAAT-AAATTA-GTACAA
gi|162777                     :     GAGTGGTTCATATA-------AATTTTGAGCTTTGTAT-GCAATCAAGCTAAAAT-AAATTA-GTATAA
gi|162778                     :     GAGCGGTTCATATA-------AGCTTTGGGCTTT-CATCGCAATCAAGCTAAAAT-AAATTA-GTAT
gi|162782                     :     GAGCGGTTGATATA-------AGCTCTGAGCTTT-CTTTGCAATCAAGCTGAAAT-AAATTA-GTATGA
gi|162784                     :     GAGCGATTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGTTAAAAT-AAAT
gi|162786                     :     GAGTGTTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCAAGCTAAACT-ATATTA-GTATAA
gi|162787                     :     GAGCGGTTCATGTA-------AGCTCTGAGCTTT-CATCACAATCGAGTTAAAAT-AAATTA-GCATAA
gi|162788                     :     GAGCGGTTCATATA-------AGCTCTGAGCTTT-CTTCACAATCGAGGTGAAAT-AAATTATGTATA
gi|162789                     :     GAGCAGTTCATATA-------AGCTCTGAGCTTT-CATTGCAATCAAGCTAAAAT-AAATTA-GTATGA
gi|162791                     :     GAGTGGTTCATATA-------GACTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-
gi|162792                     :     GAGCGGTTTATATA-------AGCTCTGAGCTTT-TCTCGTAATCGAGCTAAAAT-ATATTA-GTATAA
gi|162795                     :     GAGCGGTTCATATA-------AGCTCTAAGCTTT-CATCGCAATCGAGCTAAAAG-AAATGA-GTATAA
gi|162796                     :     GAGTGGTTCATATA-------AACTCCGAGCTTT-CATCGCAATCGAGTT-AAAT-AAATTA-GTATAA
gi|162798                     :     GAATGGTTCATATA-------AGCTCTGAGTTTT-CATCGCAATCAAACTAAAAT-AAATTG-GTATAA
gi|162964                     :      AGTGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162967                     :      AGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATCA-GTATAA
gi|162968                     :      AGCGGTTCATATA-------AGCTCTGAGCTTT-TATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|162969                     :      AGTGGTTCATATAGGCTCTGAGCTCTGAGCTTA-CTTCACAATCGAGCTAAAAT-AAATCA-GTATAA
gi|162973                     :      AGTGGTTCATATA-------AGCTCTGAACTTT-CATCGCAATCAAGCTAAAAT-AAATTA-GTAT
gi|162974                     :      AGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCAAGCTTAAAT-AAATTA-GTATAA
gi|162975                     :      AGCGGTTCGTATA-------AGCTCTGAGCTTT-CATCGCAATTGAGCTAAAAT-AAATTA-GTATAA
gi|162979                     :      AGCGGTTCATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTT-GTATGA
gi|163019                     :       GCGGTTCATATA-------AGCTCTGAGCTTC-CATCGTAATCAAGCTAAAAT-AAATTA-GTATAA
gi|163029                     :         GGTTTATATA-------AGCTCTGAGCTTT-CATCGCAATCGAGCTAAAAT-AAATTA-GTATAA
gi|163036                     :           TTCACATA-------AGCTCTGAGCTTA-CTTCACAATCAAGCTAAAAT-AAAATA-GTATAA
gi|163041                     :          aTTTATGTA-------AGCTCTGAGCTTA-CTTCTCAATTGAGCTAAAAT-AAATTA-GTATAA
gi|163059                     :            TCATATA-------AGATCTGAGCTTT-CTTCGCAGTCGAGCTAAAAT-AAATTA-GTATA