All statistics are based on contigs of size >= 100 bp, unless otherwise noted (e.g., "# contigs (>= 0 bp)" and "Total length (>= 0 bp)" include all contigs). Assembly # contigs (>= 1000 bp) # contigs (>= 5000 bp) # contigs (>= 10000 bp) # contigs (>= 25000 bp) # contigs (>= 50000 bp) Total length (>= 1000 bp) Total length (>= 5000 bp) Total length (>= 10000 bp) Total length (>= 25000 bp) Total length (>= 50000 bp) # contigs Largest contig Total length Reference length GC (%) Reference GC (%) N50 NG50 N75 NG75 L50 LG50 L75 LG75 # misassemblies # misassembled contigs Misassembled contigs length # local misassemblies # scaffold gap ext. mis. # scaffold gap loc. mis. # unaligned mis. contigs # unaligned contigs Unaligned length Genome fraction (%) Duplication ratio # N's per 100 kbp # mismatches per 100 kbp # indels per 100 kbp Largest alignment Total aligned length NA50 NGA50 NA75 NGA75 LA50 LGA50 LA75 LGA75 MG1_ets 576 0 0 0 0 802853 0 0 0 0 3770 3771 2503583 2544614 32.80 31.79 743 734 492 484 1103 1131 2146 2209 37 37 36555 18 0 0 9 24 + 106 part 114655 75.541 1.244 0.00 2035.36 37.90 3633 2159738 595 584 347 339 1289 1323 2666 2756 MG1_sjw 1110 197 49 10 5 4650409 2680023 1686843 1078091 915444 3020 370211 5600353 2544614 32.40 31.79 4593 19043 1624 8309 223 19 758 74 79 70 242311 75 0 0 72 64 + 481 part 2335169 85.774 1.497 0.00 2940.76 62.62 18818 3151238 401 3340 - 1644 1690 218 - 493 MG2_ets 371 0 0 0 0 490418 0 0 0 0 3691 2871 2237516 2544614 33.09 31.79 646 588 460 397 1172 1422 2205 2743 19 19 15341 14 0 0 8 27 + 76 part 80098 70.076 1.211 0.00 2047.47 32.88 2819 1925737 526 471 333 154 1362 1671 2692 3525 MG2_sjw 784 175 45 10 4 3646235 2190456 1319553 799594 580112 2081 329477 4280858 2544614 31.78 31.79 5117 11335 2042 5999 166 41 485 123 60 57 316778 70 0 0 53 22 + 330 part 1497361 83.834 1.306 0.00 2817.02 57.27 33804 2682118 883 3579 - 1475 666 197 - 461 MG3_ets 493 0 0 0 0 666577 0 0 0 0 3684 3249 2377305 2544614 32.99 31.79 708 672 482 442 1119 1240 2137 2409 26 26 27322 7 0 0 14 27 + 79 part 87779 74.296 1.212 0.00 1924.77 34.14 2929 2061107 584 546 351 309 1293 1441 2619 2999 MG3_sjw 719 218 87 16 7 4437855 3282225 2339417 1296948 1031573 1969 248889 5056949 2544614 32.34 31.79 8739 25016 2937 14053 108 16 353 51 66 59 348184 71 0 0 47 33 + 361 part 2215743 85.027 1.314 0.00 2641.21 64.01 31861 2758824 395 5547 - 2048 1097 133 - 323 MG5_ets 101 0 0 0 0 127612 0 0 0 0 2633 3098 1331382 2544614 32.96 31.79 510 315 389 - 906 2442 1657 - 19 18 11603 7 0 0 3 14 + 32 part 35058 45.632 1.117 0.00 1654.65 24.65 2087 1181760 439 - 321 - 1034 - 1924 - MG5_sjw 817 44 28 13 8 2935158 1485847 1384255 1150445 1001634 1961 193415 3602542 2544614 33.11 31.79 3014 14379 1277 2620 128 19 610 166 46 43 72388 15 0 0 16 15 + 167 part 1639726 71.713 1.076 0.00 1888.32 37.18 5815 1887279 355 960 - - 1582 706 - - MG6_ets 418 0 0 0 0 563718 0 0 0 0 3966 3793 2424450 2544614 33.21 31.79 653 631 458 433 1234 1328 2345 2547 28 27 26864 15 0 0 10 30 + 67 part 76354 74.107 1.246 0.00 1914.33 31.73 3286 2085516 532 510 330 305 1446 1562 2900 3184 MG6_sjw 898 174 55 9 5 3650642 2047700 1245178 561147 428067 2758 115025 4561220 2544614 32.15 31.79 4063 9711 1405 5546 226 58 705 148 75 71 307773 65 0 0 63 25 + 357 part 1345110 85.696 1.476 0.00 2810.31 58.60 18545 3109043 902 3709 - 1716 739 189 - 440 MG7_ets 232 0 0 0 0 289152 0 0 0 0 3671 2434 2055500 2544614 32.87 31.79 588 506 430 341 1232 1683 2260 3212 22 22 16355 7 0 0 7 25 + 35 part 41181 67.005 1.182 0.00 1888.13 30.22 2377 1817120 498 419 342 - 1373 1908 2621 - MG7_sjw 848 184 54 11 3 3404294 1943899 1063633 469684 196256 2373 67374 4147737 2544614 32.34 31.79 4497 8261 1522 5122 212 77 614 177 77 71 271316 65 0 0 49 32 + 325 part 1154264 85.260 1.381 0.00 2747.49 58.48 33492 2893964 1246 3943 - 1692 545 184 - 432