[15 Apr 19 07:26:39] anvio ..............................: 5.4
[15 Apr 19 07:26:39] profiler_version ...................: 31
[15 Apr 19 07:26:39] sample_id ..........................: MG3
[15 Apr 19 07:26:39] description ........................: None
[15 Apr 19 07:26:39] profile_db .........................: /gscratch/scrubbed/samwhite/outputs/20190401_metagenomics_pgen_anvio/MG3.bam-ANVIO_PROFILE/PROFILE.db
[15 Apr 19 07:26:39] contigs_db .........................: True
[15 Apr 19 07:26:39] contigs_db_hash ....................: hash8fc73e85
[15 Apr 19 07:26:39] cmd_line ...........................: /usr/lusers/samwhite/.conda/envs/anvio54/bin/anvi-profile -i MG3.bam -c contigs.db --sample-name MG3 --num-threads 28
[15 Apr 19 07:26:39] merged .............................: False
[15 Apr 19 07:26:39] blank ..............................: False
[15 Apr 19 07:26:39] split_length .......................: 20,000
[15 Apr 19 07:26:39] min_contig_length ..................: 1,000
[15 Apr 19 07:26:39] max_contig_length ..................: 9,223,372,036,854,775,807
[15 Apr 19 07:26:39] min_mean_coverage ..................: 0
[15 Apr 19 07:26:39] clustering_performed ...............: False
[15 Apr 19 07:26:39] min_coverage_for_variability .......: 10
[15 Apr 19 07:26:39] skip_SNV_profiling .................: False
[15 Apr 19 07:26:39] profile_SCVs .......................: False
[15 Apr 19 07:26:39] report_variability_full ............: False
[15 Apr 19 07:26:39] WARNING
=====================================
Your minimum contig length is set to 1,000 base pairs. So anvi'o will not take
into consideration anything below that. If you need to kill this an restart your
analysis with another minimum contig length value, feel free to press CTRL+C.
[15 Apr 19 07:26:42] input_bam ..........................: MG3.bam
[15 Apr 19 07:26:42] output_dir .........................: /gscratch/scrubbed/samwhite/outputs/20190401_metagenomics_pgen_anvio/MG3.bam-ANVIO_PROFILE
[15 Apr 19 07:26:42] total_reads_mapped .................: 148,323,108
[15 Apr 19 07:26:42] num_contigs ........................: 2,276,153
[15 Apr 19 07:26:46] num_contigs_after_M ................: 496,414
[15 Apr 19 07:26:46] num_contigs ........................: 496,414
[15 Apr 19 07:26:46] num_splits .........................: 499,952
[15 Apr 19 07:26:46] total_length .......................: 1,342,986,697
[16 Apr 19 20:18:53] New data for 'layers' in data group 'default'
=====================================
[16 Apr 19 20:18:53] Data key "total_reads_mapped" ......: Predicted type: int
[16 Apr 19 20:18:53] Data key "num_SNVs_reported" .......: Predicted type: int
[16 Apr 19 20:18:53] NEW DATA
=====================================
[16 Apr 19 20:18:53] Database ...........................: profile
[16 Apr 19 20:18:53] Data group .........................: default
[16 Apr 19 20:18:53] Data table .........................: layers
[16 Apr 19 20:18:53] New data keys ......................: total_reads_mapped, num_SNVs_reported.
[16 Apr 19 20:18:54] * Happy 
[16 Apr 19 20:18:54] Bye.