/gannet/Atumefaciens/20190327_metagenomics_pgen_megahit/MG7 Metagenomic assemblies of individual Panopea generosa water samples using Megahit, run on Mox. Output folder for BBmap BBwrap sequencing alignments and coverage of sample MG7 (pH=7.1). --- FILES - megahit_out: Megahit output folder. - MG7.aln.sam.gz: BBmap BBwrap alignment SAM file - gzipped. See SBATCH script in directory above for commands used to generate file. - MG7.coverage.txt: BBmap pileup.sh coverage file generated from SAM file. See SBATCH script in directory above for commands used to generate file. - ref: Genome reference directory created by BBmap. --- Notebook: https://robertslab.github.io/sams-notebook/2019/03/27/Metagenome-Assemblies-P.generosa-Water-Samples-Trimmed-HiSeqX-Data-Using-Megahit-on-Mox.html