Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
examining piece 1..14488 (14488 bp)
examining piece 1..16371 (16371 bp)
examining piece 1..13999 (13999 bp)
viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: .examining piece 1..13076 (13076 bp)
examining piece 1..18125 (18125 bp)
viterbi algorithm progress:
[%]: examining piece 1..12424 (12424 bp)
.viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ..examining piece 1..21339 (21339 bp)
..viterbi algorithm progress:
[%]: ...........................10.1010.....10.............................20.20...20.20...............................30.30..........30........10...30..........10......40..........40..10......40......................40...Warning: Block unknown_Q is not significant enough, removed from profile.
...Warning: Block unknown_Q is not significant enough, removed from profile.
50....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
..5020...Warning: Block unknown_C is not significant enough, removed from profile.
......examining piece 2691191..2741204 (50014 bp)
50............viterbi algorithm progress:
[%]: .Warning: Block unknown_C is not significant enough, removed from profile.
.Warning: Block unknown_H is not significant enough, removed from profile.
...20....20..........6050............60..Warning: Block unknown_I is not significant enough, removed from profile.
......60...........30.........Warning: Block unknown_B is not significant enough, removed from profile.
..70..............30........60.70..Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
...Warning: Block unknown_G is not significant enough, removed from profile.
.......70..........examining piece 42116847..42156996 (40150 bp)
80.......viterbi algorithm progress:
[%]: ..examining piece 5091326..5131442 (40117 bp)
..3010......40examining piece 40589033..40629533 (40501 bp)
.examining piece 23511447..23551590 (40144 bp)
..examining piece 38069492..38109638 (40147 bp)
.viterbi algorithm progress:
[%]: ...viterbi algorithm progress:
[%]: ..80...40viterbi algorithm progress:
[%]: ....examining piece 15917788..15958426 (40639 bp)
....examining piece 32445261..32485419 (40159 bp)
.viterbi algorithm progress:
[%]: .....70....examining piece 11942582..11987705 (45124 bp)
viterbi algorithm progress:
[%]: ......80...viterbi algorithm progress:
[%]: ........90...........viterbi algorithm progress:
[%]: Warning: Block unknown_C is not significant enough, removed from profile.
.Warning: Block unknown_F is not significant enough, removed from profile.
.............Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.......90....................examining piece 42903312..42943404 (40093 bp)
....50examining piece 50332731..50372943 (40213 bp)
...viterbi algorithm progress:
[%]: .....viterbi algorithm progress:
[%]: ....50...........1080.............90...100.........examining piece 9183102..9231256 (48155 bp)
.........
viterbi algorithm progress:
[%]: ....10010.40.examining piece 60475363..60523730 (48368 bp)
10........
.viterbi algorithm progress:
[%]: ...10.........................examining piece 8181990..8225073 (43084 bp)
.90examining piece 51533934..51577121 (43188 bp)
.....viterbi algorithm progress:
[%]: ..101060..viterbi algorithm progress:
[%]: ...examining piece 68885461..68934038 (48578 bp)
.......examining piece 37464255..37504440 (40186 bp)
.examining piece 15395681..15437448 (41768 bp)
.viterbi algorithm progress:
[%]: .examining piece 45660249..45700824 (40576 bp)
...100.viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ....10Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
1020....20.60............
...............10.examining piece 1..16157 (16157 bp)
.viterbi algorithm progress:
[%]: .................................10..........100..........10..70..viterbi algorithm progress:
[%]: ...10.5010.......
.....20....10.............20........70...20.................20.......10................examining piece 65043772..65083969 (40198 bp)
.........viterbi algorithm progress:
[%]: ....examining piece 2565066..2605221 (40156 bp)
...10..viterbi algorithm progress:
[%]: ...........80........10.20....30.................10......20.20.....Warning: Block unknown_A is not significant enough, removed from profile.
...................30..80...20............3040..10.......20..........60.20...........30.............20...50.90.......30...30................20...30.10.........20.....20.............60...........30....examining piece 30472929..30517207 (44279 bp)
........90........40..........................40....70......................40..........................100..20.....20......
.....803040..70...20.......40viterbi algorithm progress:
[%]: ...........20.......5040.....30.............................30....20..........50...30.....100.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
.90.50...................10..
.......30....50.40........Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
.........30....30.......30..............100.............50.....
.....80.6040............50..30.......60....30.60..........20....................3060.............40........30....examining piece 32642718..32688671 (45954 bp)
..40................30.................40..........70..40.40..70.viterbi algorithm progress:
[%]: .....40.30...90.Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
.....................70...................examining piece 84342915..84385855 (42941 bp)
.........50.....60.5060....................viterbi algorithm progress:
[%]: ........50......40..70.40....examining piece 40980361..41021989 (41629 bp)
.80.....viterbi algorithm progress:
[%]: .40.examining piece 18574243..18616752 (42510 bp)
......Warning: Block unknown_E is not significant enough, removed from profile.
.viterbi algorithm progress:
[%]: Warning: Block unknown_J is not significant enough, removed from profile.
............80..................40...50......................................8040...10...50...........50.100....60....40.....9050.
..40......10.......70..............50.examining piece 3635959..3679205 (43247 bp)
70......viterbi algorithm progress:
[%]: ............8090.....50...........50.............601020..........60........................100.........
...90........10........................30...100.50.......10.50..
....................70........................4080..........50.20..608020............90.......60..........60.....20.....50100.....50.....60.....50..
.....Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_I is not significant enough, removed from profile.
.60..70......60.................................6060......30.................80..................60.............90...90...............examining piece 53416511..53500673 (84163 bp)
.................100..............70.Warning: Block unknown_Q is not significant enough, removed from profile.
.....6030...60.70..40.80.7030.
...70....90............70....70....70......viterbi algorithm progress:
[%]: ..............................80.60...70.....100......60..100...........Warning: Block unknown_E is not significant enough, removed from profile.
.......

.....................50.examining piece 55778796..55818942 (40147 bp)
..viterbi algorithm progress:
[%]: .............90..............100...examining piece 26848286..26911015 (62730 bp)
.70...90...............80..
....10..7080.examining piece 2698547..2757340 (58794 bp)
......8080..1080.100.viterbi algorithm progress:
[%]: ......
40...viterbi algorithm progress:
[%]: ..........40.........60.....70..........................................Warning: Block unknown_F is not significant enough, removed from profile.
.............20100..80....Warning: Block unknown_F is not significant enough, removed from profile.
...70................
70........90.........20.....Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
9080..20...9050.90...examining piece 25831246..25884713 (53468 bp)
10...Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.examining piece 37805984..37850071 (44088 bp)
...viterbi algorithm progress:
[%]: .70.....70......30...90.....examining piece 18760848..18800964 (40117 bp)
....viterbi algorithm progress:
[%]: .....examining piece 1636542..1676637 (40096 bp)
...viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ...examining piece 1..13076 (13076 bp)
viterbi algorithm progress:
[%]: ..........................................10............50....10examining piece 37550693..37590893 (40201 bp)
....viterbi algorithm progress:
[%]: ............10..20...............80.............90...30............100...............20...40..40.8080......
................10.........50...........10100..20.......30......20.....60...100.....
...30.........80......70100..........80.60........90....
8080..20...100.
........80..........10....9050......30.40....
.............100..
.............Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
.........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
..examining piece 1..12424 (12424 bp)
viterbi algorithm progress:
[%]: .......examining piece 1..12424 (12424 bp)
.viterbi algorithm progress:
[%]: ...10030.............10..........60..10....50.........20........
..........20..................90....30........40......30...Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.Warning: Block unknown_N is not significant enough, removed from profile.
..........40......90.4060........60...30.40.................................90Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.50...........50..................50.....90100.60....examining piece 10320679..10360792 (40114 bp)
...viterbi algorithm progress:
[%]: ....60......70......................examining piece 8828757..8886961 (58205 bp)
.70viterbi algorithm progress:
[%]: ..........7090.....
....30.50.......examining piece 31079559..31119720 (40162 bp)
............80100.......viterbi algorithm progress:
[%]: ...10...80...............................90.
..70....Warning: Block unknown_C is not significant enough, removed from profile.
...Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
70.......90Warning: Block unknown_B is not significant enough, removed from profile.
........10.60.................100.........
.80..10100..7060...
.........20..20.......100.....examining piece 33282670..33334475 (51806 bp)
.100......................40.
....30examining piece 15502680..15550513 (47834 bp)
..viterbi algorithm progress:
[%]: .......
.....viterbi algorithm progress:
[%]: ..90.....................9070........304070..80.......Warning: Block unknown_G is not significant enough, removed from profile.
................20.....................10....Warning: Block unknown_H is not significant enough, removed from profile.
50....40100..............100.
examining piece 13385880..13426026 (40147 bp)
........examining piece 25135345..25175860 (40516 bp)
.......viterbi algorithm progress:
[%]: ....80..viterbi algorithm progress:
[%]: .......
100..40..........60...........50.......examining piece 50885383..50926604 (41222 bp)
....1010........viterbi algorithm progress:
[%]: ...........examining piece 42002900..42043142 (40243 bp)
....
...80............30......20..20...........90.viterbi algorithm progress:
[%]: .20..............examining piece 4644362..4695971 (51610 bp)
...90......80..103050.10.......60...........20......viterbi algorithm progress:
[%]: ...50........20.....80........................40....90.....30...examining piece 1..40340 (40340 bp)
.........10...........viterbi algorithm progress:
[%]: .....30....Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
..................30.40.100....10....50..10............30.70...
..................40...100...40..50.20..............60........
........60.......100...30.................100.examining piece 2228345..2272299 (43955 bp)
.viterbi algorithm progress:
[%]: ......501040..80..40........70...........90.......70.......
.....10..examining piece 32819339..32861122 (41784 bp)
..50.90.....
..........60........60........Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.viterbi algorithm progress:
[%]: ...........60...40..80....20.90.......60...50.............examining piece 74455668..74499513 (43846 bp)
.viterbi algorithm progress:
[%]: .......examining piece 28857017..28897184 (40168 bp)
50..Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
..viterbi algorithm progress:
[%]: ..7070.........................10..............30...........Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.....10.70.....examining piece 3801896..3849344 (47449 bp)
...viterbi algorithm progress:
[%]: .....20...80.........................................40.8030............100..............examining piece 19759031..19805460 (46430 bp)
viterbi algorithm progress:
[%]: ...
.10...............60.40.90..................20....10.......50................50............examining piece 52981353..53029020 (47668 bp)
.viterbi algorithm progress:
[%]: 20.....30......80..90100..........................20.60....
70........60.......60.10.............40.........4030...............3070...10.................70..............70........70..20........10..50...........examining piece 40800625..40844435 (43811 bp)
..viterbi algorithm progress:
[%]: ..40.........80.....40.....................10...90...................80.......30.....60........20..90..........90....80....................70............30........80...20.....50.............Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
.....90.504090............100......100
...40...........80.......30.................100.........examining piece 4673797..4720912 (47116 bp)
..viterbi algorithm progress:
[%]: ..
...50........100.....
70..100....50....
.....100............20......6010..90.40.
....60.....20...8060..............80..
.90...................20..............Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.50....70.......60............examining piece 33052294..33093598 (41305 bp)
.viterbi algorithm progress:
[%]: .......Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_X is not significant enough, removed from profile.
.....examining piece 38079655..38119810 (40156 bp)
.viterbi algorithm progress:
[%]: ...70...................90........examining piece 19873754..19913891 (40138 bp)
....viterbi algorithm progress:
[%]: ..10....10........80............70.30.........305020..90............60....examining piece 43069277..43119547 (50271 bp)
....viterbi algorithm progress:
[%]: .........Warning: Block unknown_A is not significant enough, removed from profile.
.20...10...20.........30..............100..Warning: Block unknown_A is not significant enough, removed from profile.
.........70...20..100.....
....100....80....4090........20....examining piece 30422653..30483032 (60380 bp)
20.40100.......
..30.....30.viterbi algorithm progress:
[%]: ..90.......
......50.....Warning: Block unknown_A is not significant enough, removed from profile.
.40.......10.examining piece 1..17495 (17495 bp)
..viterbi algorithm progress:
[%]: ..................................examining piece 19750737..19824959 (74223 bp)
...30...........6040.....10........viterbi algorithm progress:
[%]: ..............70...........50........20........10.40....70.....30..100....20............30..80............40.50.................
........8080.60.90...50...........
.........20......................20..80....Warning: Block unknown_B is not significant enough, removed from profile.
...50....90.4050..60.............100.....70..........................50..................100......examining piece 40859411..40902236 (42826 bp)
.....viterbi algorithm progress:
[%]: .
...........60....100..60...........
...60......1070..........30.70.examining piece 52905173..52945421 (40249 bp)
....viterbi algorithm progress:
[%]: ....
.....90.....Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.....80........2090..90...80........................60....examining piece 44704973..44749616 (44644 bp)
.viterbi algorithm progress:
[%]: .90.......100.........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
80......examining piece 23987448..24028586 (41139 bp)
.viterbi algorithm progress:
[%]: ...30.......30..............100
......10
.........Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
.......10.............10.....examining piece 42499011..42539160 (40150 bp)
...40..............70.....9020viterbi algorithm progress:
[%]: ............40..............4020......20........examining piece 50929270..50980771 (51502 bp)
....viterbi algorithm progress:
[%]: ....9070..10.........50.......10030......100...............30.........
....................100.
....30...20......Warning: Block unknown_H is not significant enough, removed from profile.
...40......
.70...Warning: Block unknown_F is not significant enough, removed from profile.
40....60...............80.100....................30.
...100..10....examining piece 27959273..28010672 (51400 bp)
...viterbi algorithm progress:
[%]: ..50..50......
.........Warning: Block unknown_F is not significant enough, removed from profile.
.40..examining piece 4632520..4684025 (51506 bp)
50viterbi algorithm progress:
[%]: ......70.................10............40....10....80.60.......examining piece 1..11668 (11668 bp)
viterbi algorithm progress:
[%]: .60.................................1020...examining piece 59770061..59811372 (41312 bp)
..viterbi algorithm progress:
[%]: ........2080..........50.....60..........20.....50......90............10..............5030..........70.....30.80....100....20.......Warning: Block unknown_I is not significant enough, removed from profile.
...Warning: Block unknown_S is not significant enough, removed from profile.
.30.Warning: Block unknown_X is not significant enough, removed from profile.
..............Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
6040...........20............................................7070.....90...503060..30....60.....examining piece 6788181..6834008 (45828 bp)
...40.....40....examining piece 46709325..46750219 (40895 bp)
viterbi algorithm progress:
[%]: ...................viterbi algorithm progress:
[%]: .......80.80.10......examining piece 41774225..41817173 (42949 bp)
....viterbi algorithm progress:
[%]: .......60...40....4010...................100.............70......90......examining piece 41605290..41662627 (57338 bp)
....90..20.viterbi algorithm progress:
[%]: .............80.......70
...................50..........100....50......30...
....100......
90....5070..................3080.......40.10...................60..................50..90.90...50..............20............10.90.........60..100..................60..70..
..30....
...............70............100........80...60
2070..Warning: Block unknown_F is not significant enough, removed from profile.
......100.........80100....30...70......
..
..80.....examining piece 18685945..18727388 (41444 bp)
.....examining piece 34638343..34679340 (40998 bp)
.....examining piece 44309333..44353290 (43958 bp)
..viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: .......viterbi algorithm progress:
[%]: ............5030..20.....40........90.....10..............90...................20......30...100......40..701080........60.....
..........40...........80100.........
.........examining piece 16228634..16299690 (71057 bp)
......Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
..........50viterbi algorithm progress:
[%]: .....................70.....examining piece 16257938..16346391 (88454 bp)
100....90...90.
40..viterbi algorithm progress:
[%]: .......606050....20..80......examining piece 26815325..26855945 (40621 bp)
..........80viterbi algorithm progress:
[%]: ...40....examining piece 1087642..1128067 (40426 bp)
.examining piece 8025042..8065134 (40093 bp)
...viterbi algorithm progress:
[%]: .....viterbi algorithm progress:
[%]: ................................701010..............10..Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
.............100....................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
..20
....30...........20..8060.........50.......30...examining piece 29869117..29914568 (45452 bp)
..Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_V is not significant enough, removed from profile.
Warning: Block unknown_Z is not significant enough, removed from profile.
30.viterbi algorithm progress:
[%]: .90......examining piece 50617321..50657506 (40186 bp)
80...viterbi algorithm progress:
[%]: ............30.................30..10......90...examining piece 31789587..31830087 (40501 bp)
.viterbi algorithm progress:
[%]: ...........40......50...................90............20............................4040.....10....10..100..10.....100.....
........10050.
.......
........30..........examining piece 1..11723 (11723 bp)
viterbi algorithm progress:
[%]: ...10070................10..............20..........Warning: Block unknown_A is not significant enough, removed from profile.
..
30.......examining piece 1..19033 (19033 bp)
.viterbi algorithm progress:
[%]: .........40.....50...60...40...50................40...60..20................70..10....................80...............examining piece 37095471..37140750 (45280 bp)
20Warning: Block unknown_A is not significant enough, removed from profile.
............90......examining piece 1..13589 (13589 bp)
viterbi algorithm progress:
[%]: ...viterbi algorithm progress:
[%]: ....50.....20....100.40...
...20...........60.60...70................10..examining piece 1..15203 (15203 bp)
.viterbi algorithm progress:
[%]: ..70...10........10..50.3050...........10...........20...............20.....20.......................60....20...30.....60.30.40..80.60..........................30...40.70........40.....................5080....70........................50..10.5060.....................examining piece 26046846..26089407 (42562 bp)
.............80.....90.70.viterbi algorithm progress:
[%]: ..................60........................80.....60........90...............7070.90.80............................................100......
...80100.40..
...20.......20..100...70...............
...........90.............50.6030..70.....90..40......8080.......30..10010...........
..............6040....................70................90Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.30..20.30.5050.Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
...30.............30..............90.100............40......
......examining piece 5999345..6041797 (42453 bp)
..viterbi algorithm progress:
[%]: ..100...Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_N is not significant enough, removed from profile.
.examining piece 27108818..27148949 (40132 bp)
....10.60........
..30........viterbi algorithm progress:
[%]: .......10....50......................examining piece 43890610..43931983 (41374 bp)
...viterbi algorithm progress:
[%]: ............examining piece 47966372..48015300 (48929 bp)
.....viterbi algorithm progress:
[%]: ...........20.............examining piece 1..16902 (16902 bp)
viterbi algorithm progress:
[%]: ..10.....70....10.......40..60......80........40.......100.....10............7030...........50........
......10..40.......20....2020..........................70....................8060....30.30..20....................40.....60.......80......30........50....40..40......20..examining piece 19515406..19558920 (43515 bp)
....viterbi algorithm progress:
[%]: .....60examining piece 1..16902 (16902 bp)
..viterbi algorithm progress:
[%]: .........80............80......................50..50.............90.10.........105050.......70...40..............................20..........60.........60.30.................................30.9020..................30..........70............90..504070..40.........80.........................60............70.30.50..80....60.....100........................80
......50.....80...........60..........50.......6090.....40..100..............40
...40....80...90..70........60..........100......90....
....40..60.90..........50.....7090.....80...70..................................................100.90..
....100...50.60.......70..
..70..50.....................100Warning: Block unknown_S is not significant enough, removed from profile.
.....
.examining piece 1..10144 (10144 bp)
.viterbi algorithm progress:
[%]: ...80.80.........80..70..Warning: Block unknown_S is not significant enough, removed from profile.
.....50.Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.90.examining piece 1..10352 (10352 bp)
10viterbi algorithm progress:
[%]: ........................20.......80...........10.....9030......examining piece 56951336..57006929 (55594 bp)
...70...............90....examining piece 66875937..66919232 (43296 bp)
viterbi algorithm progress:
[%]: ..40.20.................80..examining piece 42681314..42722070 (40757 bp)
.........viterbi algorithm progress:
[%]: viterbi algorithm progress:
[%]: ...........50......7030.........................60.........9060...........90.........10...90.40.............90..........70..............80.........50...........60..60...........examining piece 60713039..60753251 (40213 bp)
......viterbi algorithm progress:
[%]: ..80.........6090.........60....20..........100..100..100..............
.10090.
...80100.....
...70...
.
.....90.............70....100....
.80........Warning: Block unknown_I is not significant enough, removed from profile.
......30.examining piece 1..21383 (21383 bp)
..viterbi algorithm progress:
[%]: ...............90..100..10..................
..........20.50.......100.........
...........30............10..70.........40....90..40....20......70...Warning: Block unknown_E is not significant enough, removed from profile.
........80.examining piece 14719582..14763723 (44142 bp)
..viterbi algorithm progress:
[%]: ...70...50.10030...80.................90..100..examining piece 19288915..19331695 (42781 bp)
...viterbi algorithm progress:
[%]: ...10......Warning: Block unknown_B is not significant enough, removed from profile.
.60..examining piece 30253054..30293188 (40135 bp)
...40..Warning: Block unknown_V is not significant enough, removed from profile.
....Warning: Block unknown_H is not significant enough, removed from profile.
.
........examining piece 45506611..45553125 (46515 bp)
............viterbi algorithm progress:
[%]: .................
7020..10............50.10........viterbi algorithm progress:
[%]: ................50.......examining piece 22667881..22715944 (48064 bp)
......viterbi algorithm progress:
[%]: ....20.examining piece 25727174..25797675 (70502 bp)
examining piece 42382237..42440820 (58584 bp)
..30..80.100...................viterbi algorithm progress:
[%]: .........60.20...............30
......viterbi algorithm progress:
[%]: ....7010.1040...90.....................100...............40.........................70.......50..30.....
.....5090........80100.100...10......
......................2060............6080........
.....40.................60....20.70......100.........100.....70......examining piece 1..14919 (14919 bp)
.viterbi algorithm progress:
[%]: .90.20....................
10...............20.............10.30..80.......50......304080...10...................50..................100.....60...80.........10030........70.......
.....90............80.....
................90...........60..30...examining piece 6933385..6973507 (40123 bp)
.100.100...

....100...40
90..
40.Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
..viterbi algorithm progress:
[%]: ..examining piece 16715141..16757731 (42591 bp)
..viterbi algorithm progress:
[%]: ..70...............90...80....10..70......................Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
50..Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
20examining piece 1..10602 (10602 bp)
.Warning: Block unknown_I is not significant enough, removed from profile.
.viterbi algorithm progress:
[%]: ....examining piece 2879132..2927341 (48210 bp)
............10........viterbi algorithm progress:
[%]: .........Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
examining piece 49650278..49709679 (59402 bp)
......20examining piece 1..10602 (10602 bp)
viterbi algorithm progress:
[%]: .......................1030...30..viterbi algorithm progress:
[%]: .......examining piece 7406372..7446545 (40174 bp)
.....20viterbi algorithm progress:
[%]: .....80...5040..2040.........examining piece 37464619..37504993 (40375 bp)
......................Warning: Block unknown_J is not significant enough, removed from profile.
.30........examining piece 4858667..4916387 (57721 bp)
50......viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: .................40...60.40.......................90..50.7060....10.....80.....................60examining piece 25772214..25813700 (41487 bp)
..60..10.80........................70.......90..........examining piece 31240994..31281833 (40840 bp)
..viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: .....90.....80.10.....20........100.......90..
..........90.....Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.............examining piece 1..10602 (10602 bp)
.viterbi algorithm progress:
[%]: .......50.....80....10..100.....examining piece 1..14025 (14025 bp)
viterbi algorithm progress:
[%]: ....
.10........50..................10.......20.30.....................20....20..examining piece 1..14025 (14025 bp)
.viterbi algorithm progress:
[%]: .....30........70.60................30...10....60................40.............20..20....100....2040...100................50.......30
......10...........50..........40....60..........40................
...60...............70............90..50...70....70.......................80.........30.6080...........30....80...................examining piece 1..14025 (14025 bp)
..viterbi algorithm progress:
[%]: .9070.........90............................10....8030..5030...........100.80..100..20.
.............90.......
90........10030.......................100....100..
.40..................50....90...........60........60..
..............90.60407010...10.........40..........100....80Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_K is not significant enough, removed from profile.
..40..100.......
.........10..90...
.............Warning: Block unknown_H is not significant enough, removed from profile.
.......
50...100examining piece 25611487..25653777 (42291 bp)
.
.....Warning: Block unknown_A is not significant enough, removed from profile.
.70...........viterbi algorithm progress:
[%]: ........examining piece 31392583..31469717 (77135 bp)
...100.......100..
....50..viterbi algorithm progress:
[%]: ......examining piece 45490927..45534860 (43934 bp)
.viterbi algorithm progress:
[%]: ...
60..Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
80.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
examining piece 55271121..55320186 (49066 bp)
..20viterbi algorithm progress:
[%]: ..examining piece 1..11307 (11307 bp)
viterbi algorithm progress:
[%]: ...examining piece 1..11307 (11307 bp)
viterbi algorithm progress:
[%]: ....................50.10.............10.....70...10........................20.........20......10.examining piece 8221902..8306583 (84682 bp)
examining piece 12714387..12756712 (42326 bp)
...viterbi algorithm progress:
[%]: ......20..30...Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
..........10.......30................40...................40..10.............70...100.1050..........70...30.50..90.............20....60..........
...20.6060..viterbi algorithm progress:
[%]: .......................Warning: Block unknown_L is not significant enough, removed from profile.
...70.........40......70examining piece 76115274..76155495 (40222 bp)
....40...............viterbi algorithm progress:
[%]: ........80.......30............80..........602030..............90..............20...100..90.10...........80...5040...examining piece 46858707..46899225 (40519 bp)
.100......20.....

.....100........
...viterbi algorithm progress:
[%]: ..............30.......40............80.....50........20examining piece 34821819..34861932 (40114 bp)
.60.........40.......10.......70....70........viterbi algorithm progress:
[%]: ............................50.....90...60.1050.70....Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
...30...................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_V is not significant enough, removed from profile.
.....20........70..2030.......60..........................examining piece 36569454..36613328 (43875 bp)
80examining piece 32255691..32295834 (40144 bp)
...viterbi algorithm progress:
[%]: .30........examining piece 36211515..36251829 (40315 bp)
viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: ................70.......90.....60.........10examining piece 2940795..2984764 (43970 bp)
....70....40.viterbi algorithm progress:
[%]: ....................100...........10.
20..90............90.........50............80...................30....70...............80.80.........100...30..20..
....20.....40.90.......................................30.......50..2080.......90........60...........40......100......30.
..40...30.......60.............examining piece 51563..104833 (53271 bp)
....50.....viterbi algorithm progress:
[%]: ......10090.90...100..........
..........
.....70...60examining piece 61040344..61080841 (40498 bp)
.40..viterbi algorithm progress:
[%]: ..10.....................30........40...10..................................20.7050..1080.........................100...20........60.20...........
...............30.Warning: Block unknown_S is not significant enough, removed from profile.
.......50.1050..............70.30............80.....40....examining piece 6602308..6663969 (61662 bp)
..6090.viterbi algorithm progress:
[%]: .....50....................40......80....70......30.....50.100.........................
...examining piece 51768850..51808975 (40126 bp)
40Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
50.viterbi algorithm progress:
[%]: ..80..........90............90......60..................90...........80..1010060.....examining piece 13204667..13248124 (43458 bp)
................
....100.70.100..viterbi algorithm progress:
[%]: ....

.....10....40.............70....20....10......10.80.examining piece 24259364..24299468 (40105 bp)
100..viterbi algorithm progress:
[%]: ...60............
...................80.30.....10.............20.....90......80............20........40..Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
20...Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
.................3090.......20....50......100...examining piece 16408020..16457958 (49939 bp)
...viterbi algorithm progress:
[%]: .
.Warning: Block unknown_E is not significant enough, removed from profile.
...50..examining piece 25435544..25486147 (50604 bp)
......viterbi algorithm progress:
[%]: ..........40.examining piece 25112986..25153120 (40135 bp)
.......10030...
....20........70....30....examining piece 1..31653 (31653 bp)
.viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: ......1080..............60.examining piece 12975809..13015880 (40072 bp)
....40.viterbi algorithm progress:
[%]: .10......examining piece 9806..38448 (28643 bp)
..50.viterbi algorithm progress:
[%]: ........................................20.10.............70......10....10...............20.100..30.50......20..40......70..........6030Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
..60.......40..........................40........................50.......50........60..................80.60.....60.......................70.30................2070.20............80.50....examining piece 49892797..49937149 (44353 bp)
.....viterbi algorithm progress:
[%]: ..............30..........90.90..7080.....................................10030........
..........
.....90.1010......40..............80....70.....100....8010040...

..60.........................30..Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
..........40...9050...20.........50...........examining piece 24795634..24843151 (47518 bp)
Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_C is not significant enough, removed from profile.
.....................viterbi algorithm progress:
[%]: ......50.examining piece 21764292..21807284 (42993 bp)
....viterbi algorithm progress:
[%]: .........10030....
.60.70.....70.Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
............9040...........40........40.60....examining piece 20948230..20988373 (40144 bp)
.viterbi algorithm progress:
[%]: .....examining piece 62428833..62473377 (44545 bp)
20..................viterbi algorithm progress:
[%]: ...10............60..70.........90............10.20..80....50...................90..............30......80..............70......examining piece 39342073..39391599 (49527 bp)
............viterbi algorithm progress:
[%]: .40100.................70....50....80..60.
...5030...............................10..9010........80...........60................20.................30.......50...2020.2070.....80...70..............90.........................................9080.....30.......40100.60...........
40.....100.80...............
......90.....90.....90.40.........................80......100examining piece 81909011..81970288 (61278 bp)
.viterbi algorithm progress:
[%]: .....
40100...90...........50..Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
...
..................10010examining piece 7691143..7731568 (40426 bp)
.viterbi algorithm progress:
[%]: ..50....
...................50..10.....60.50.10.100.examining piece 43779550..43836359 (56810 bp)
...viterbi algorithm progress:
[%]: .60....60..........70...
............70..........30..............8020....80........90...1020.......60.90............30....examining piece 6242797..6283330 (40534 bp)
............70100...
.viterbi algorithm progress:
[%]: ...30...90..20examining piece 32188292..32235873 (47582 bp)
.......viterbi algorithm progress:
[%]: ................................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
....10........70examining piece 1675123..1723056 (47934 bp)
...viterbi algorithm progress:
[%]: .....40............30......30..........20......examining piece 33841267..33881383 (40117 bp)
....Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
..10...viterbi algorithm progress:
[%]: ...80.....80.............80....30.50...10..............20...examining piece 25841623..25905594 (63972 bp)
.60.................40....viterbi algorithm progress:
[%]: ........40.................100......30.90............40
.......60.90..............30..............40...40.....50.90............................................100..........50..
..5070..100...
................90.....70........60.10....50.examining piece 30056638..30096958 (40321 bp)
.......viterbi algorithm progress:
[%]: .60.50....70......100.60.30....8040Warning: Block unknown_C is not significant enough, removed from profile.
..
.............100................50examining piece 29797518..29837637 (40120 bp)
.viterbi algorithm progress:
[%]: ...............examining piece 49778485..49828829 (50345 bp)
..viterbi algorithm progress:
[%]: ...90.....70.................60....Warning: Block unknown_C is not significant enough, removed from profile.
........10.....examining piece 1..20040 (20040 bp)
.viterbi algorithm progress:
[%]: ...........70........20......70..
.......10.20.......901010..........70..................30.....30..................80..20.........................40..80.....40.................30....10............50..Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
..Warning: Block unknown_Y is not significant enough, removed from profile.
Warning: Block unknown_AK is not significant enough, removed from profile.
Warning: Block unknown_AO is not significant enough, removed from profile.
.............20100....50..............40..........606090.......10............examining piece 48719930..48772019 (52090 bp)
............8050..90.......8020..60.70100....viterbi algorithm progress:
[%]: .80....100.......100.........60.......
..308060....
.........
.....80..100...........70.
.......20......70..
.....................90..80.................40...................100.....90....
100....
.80.....Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
........Warning: Block unknown_G is not significant enough, removed from profile.
.100.20...30.
....examining piece 4709104..4761543 (52440 bp)
.viterbi algorithm progress:
[%]: ....50.90Warning: Block unknown_C is not significant enough, removed from profile.
.....examining piece 14769948..14830100 (60153 bp)
...60.examining piece 1717632..1759498 (41867 bp)
.viterbi algorithm progress:
[%]: ....50..viterbi algorithm progress:
[%]: ..10..................90.....9010......Warning: Block unknown_B is not significant enough, removed from profile.
....examining piece 25063748..25109502 (45755 bp)
..viterbi algorithm progress:
[%]: .10..........Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
..70........20...........................10.examining piece 29519178..29562027 (42850 bp)
....607040....30..........100..Warning: Block unknown_D is not significant enough, removed from profile.
......20...........viterbi algorithm progress:
[%]: ..30...examining piece 55236262..55299288 (63027 bp)
..
........10.......viterbi algorithm progress:
[%]: .40..20.........40....................................50......5040.......90..examining piece 40294039..40337964 (43926 bp)
...viterbi algorithm progress:
[%]: ....30...examining piece 83287070..83327645 (40576 bp)
....viterbi algorithm progress:
[%]: .....60..70.....30..............90...........80.........1060.70.10......................10..............................80..100....10020..5040....70..............
.
........40....90.........20...20...................30........90......20...100.....80..
..............20.........50......80...30...40..50...50..........90................60..........................60.examining piece 87426793..87472641 (45849 bp)
viterbi algorithm progress:
[%]: ...50...80.......30.....40....100............
.....10...100.60....
.......Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
.........examining piece 15779969..15820238 (40270 bp)
........60.....7090..70...20..30..viterbi algorithm progress:
[%]: .............examining piece 25683646..25724304 (40659 bp)
...viterbi algorithm progress:
[%]: ...40..50..........examining piece 3031690..3072355 (40666 bp)
......viterbi algorithm progress:
[%]: ..............................3070..........1070..10......................80........100................10.60..20....404020.80.....60...................80...........100...30.
.examining piece 59066712..59122980 (56269 bp)
......viterbi algorithm progress:
[%]: ............examining piece 37419339..37460009 (40671 bp)
..viterbi algorithm progress:
[%]: ..
......3080.......50.........90..........100..........10....40................70....90...........
.30....20........40....10..................50...40..30...........90....60......60................4090.....100.50..........
.............100.5060........80..........90...............examining piece 30199043..30239237 (40195 bp)
.viterbi algorithm progress:
[%]: .6070.
................70.................10..........6070.......20.70........20...............100.........100Warning: Block unknown_D is not significant enough, removed from profile.
....
examining piece 2894..33825 (30932 bp)
.viterbi algorithm progress:
[%]: .30
....90....Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
80......70....80.....................10....40................90....examining piece 15685779..15725910 (40132 bp)
...80......examining piece 9627321..9673669 (46349 bp)
...viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: .....5020............................1070...............................10010106030.
...............Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
..90examining piece 5547368..5599513 (52146 bp)
.....viterbi algorithm progress:
[%]: ..30........100............70..
.........90..40examining piece 8217547..8260846 (43300 bp)
.viterbi algorithm progress:
[%]: .....20...............20.........3080.....80....80.......20Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
..10.......50........10......50......................30...examining piece 20642..41140 (20499 bp)
..viterbi algorithm progress:
[%]: ...90.................10......60..80.......30..100........examining piece 41865937..41906074 (40138 bp)
.20.....20100....
.........viterbi algorithm progress:
[%]: .......100...100
20.30............
.................90.40....40.....104040.70.....examining piece 11533302..11573412 (40111 bp)
...viterbi algorithm progress:
[%]: ..............5030......
.........50...............10......40....60..............................30.......70.20.................30..........8080.........40.............50.30................90....50....Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_C is not significant enough, removed from profile.
.Warning: Block unknown_V is not significant enough, removed from profile.
..........40...........50......100100.40..
...90.Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
..Warning: Block unknown_V is not significant enough, removed from profile.
.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
.........90........50........examining piece 15927684..15970284 (42601 bp)
.20...50viterbi algorithm progress:
[%]: ..examining piece 1..21259 (21259 bp)
.viterbi algorithm progress:
[%]: .50...........40............10...................examining piece 59785408..59855366 (69959 bp)
examining piece 37850193..37890396 (40204 bp)
..100..viterbi algorithm progress:
[%]: ...20............
..............60...3060...40....60.viterbi algorithm progress:
[%]: ......60....90..60....40..50..........10.50......60.....50..................70..................50.examining piece 1..29654 (29654 bp)
60..viterbi algorithm progress:
[%]: .....70...60.........................10.........70.7080.......20.......10...............80........50..........60............examining piece 27847019..27887249 (40231 bp)
..90.70...............examining piece 31110012..31150116 (40105 bp)
.90...100.........viterbi algorithm progress:
[%]: ..20.100.70viterbi algorithm progress:
[%]: ..
.........30......................70...80.......10...70...100..30..........
........................20........40............................804020.......90...........30..60...60..................50..........80.....50........40.60........90.100.........10080.................
.......5060......
..80......80..60.................70.......100....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.examining piece 25989080..26029469 (40390 bp)
.viterbi algorithm progress:
[%]: 100.6030......
..70.........30..........10...........................70...70...
..70....examining piece 62591126..62632885 (41760 bp)
......20..............examining piece 14133122..14180571 (47450 bp)
...90....80.viterbi algorithm progress:
[%]: .........40.80..viterbi algorithm progress:
[%]: ........30.80...70..examining piece 1..10185 (10185 bp)
.viterbi algorithm progress:
[%]: ..........90.......20..
.....40......Warning: Block unknown_D is not significant enough, removed from profile.
..............10.......40...............70.......80...50.20....90...........90......Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.....30..............10..50examining piece 52823749..52865445 (41697 bp)
...viterbi algorithm progress:
[%]: ...20.40................................50...............80.....10.10.90..........60....................60..examining piece 11707218..11747601 (40384 bp)
....20100...7060.....6020...100..........viterbi algorithm progress:
[%]: .......90

......80..............................100............30.90.........7010........30..............100.
...
......40......30examining piece 1..10185 (10185 bp)
viterbi algorithm progress:
[%]: ..50....examining piece 1..10185 (10185 bp)
viterbi algorithm progress:
[%]: .......70.............100...10..........................20.50.80..
10.40....................30...........20.............80.......40.........1003090....................60..5040.......
.................90......5060..............examining piece 18647707..18687787 (40081 bp)
..........50...Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
.viterbi algorithm progress:
[%]: ....6070..............70..............70....80........80.........................70807010..90........examining piece 8198235..8239825 (41591 bp)
...viterbi algorithm progress:
[%]: ....100............90....90.80..100......

......Warning: Block unknown_G is not significant enough, removed from profile.
................100....80
.6010100....20......60.examining piece 31845770..31887531 (41762 bp)
...viterbi algorithm progress:
[%]: ..........90examining piece 56472650..56540651 (68002 bp)
........90....90............10...100.......Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.......30....
...viterbi algorithm progress:
[%]: ....Warning: Block unknown_M is not significant enough, removed from profile.
.20..........
10020....
........70....10........20...examining piece 50821726..50874884 (53159 bp)
..viterbi algorithm progress:
[%]: ......Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
Warning: Block unknown_Z is not significant enough, removed from profile.
Warning: Block unknown_AA is not significant enough, removed from profile.
.90.examining piece 13557533..13603875 (46343 bp)
4080....30.30.viterbi algorithm progress:
[%]: ...........100.40.....20..Warning: Block unknown_D is not significant enough, removed from profile.
..............
...10..40...10......Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
..examining piece 53289376..53349382 (60007 bp)
...viterbi algorithm progress:
[%]: ....Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
....20.examining piece 155191..206432 (51242 bp)
40..viterbi algorithm progress:
[%]: .......10...50.50.examining piece 13547491..13591908 (44418 bp)
...viterbi algorithm progress:
[%]: ......................examining piece 1418403..1468680 (50278 bp)
....viterbi algorithm progress:
[%]: ..............examining piece 17344389..17390997 (46609 bp)
...viterbi algorithm progress:
[%]: ..............1060..............10...............50......20......60.............70..............20Warning: Block unknown_D is not significant enough, removed from profile.
..........100......10......20.............20.......80....10...........60....10...80......examining piece 2278604..2327603 (49000 bp)
..........70............viterbi algorithm progress:
[%]: .90.30......30.90100.....100...........................20...10...
............
....20...30.........70..........100.20......
...40.......80........40....30.70...30.30.
......90............Warning: Block unknown_M is not significant enough, removed from profile.
100.....examining piece 1..17609 (17609 bp)
.viterbi algorithm progress:
[%]: .........................40...50.........501030..........80..40Warning: Block unknown_J is not significant enough, removed from profile.
....80...............20....20..30..50.....50....................examining piece 3227323..3272846 (45524 bp)
........30...30...........
................viterbi algorithm progress:
[%]: .......40100.....60.6090......50.....4040....Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
.Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.

...........50..................30...20...................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_H is not significant enough, removed from profile.
.70.examining piece 15475923..15558293 (82371 bp)
.viterbi algorithm progress:
[%]: ..8060..........9010.100....60......
.........20..examining piece .12598250..12700618 (102369 bp)
....30.....70.70......examining piece 40811322..40856251 (44930 bp)
............viterbi algorithm progress:
[%]: .........60...........80viterbi algorithm progress:
[%]: ....8050..............20........................Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
10Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
...90......50..........................1030.70Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
80........70..examining piece 11947220..11989682 (42463 bp)
...100.....
...............viterbi algorithm progress:
[%]: ..................40examining piece 12266272..12306451 (40180 bp)
.viterbi algorithm progress:
[%]: .........30........9040...............100......10.......60....................50...50........80.....20..40...9020.80...............
.........40..60..................30...40.............20......60....706010................40...........................40....examining piece 26104123..26144305 (40183 bp)
.80.viterbi algorithm progress:
[%]: .........................90.............50..10..........50........90100..........70.90..20......50.....
.30........60...90..70....60...............100.......30..............100..30........
..100.......................40..
...70.examining piece 1..11372 (11372 bp)
viterbi algorithm progress:
[%]: ...9070.....80100........
.......10.........50..........20...............30examining piece 43237424..43277591 (40168 bp)
................40.
.....30........50...viterbi algorithm progress:
[%]: .100.........60..60...50....80....70....................80......80..
.100.......90................10.100..Warning: Block unknown_F is not significant enough, removed from profile.

7070...................20......20........90.80....80...examining piece 6242238..6283365 (41128 bp)
.90.viterbi algorithm progress:
[%]: .30.40.............................90.....
40.......9010..................40...................40....50..100...........20
....50100.........Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
..
.....examining piece 1..21010 (21010 bp)
.viterbi algorithm progress:
[%]: Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
....60...................examining piece 26852438..26895649 (43212 bp)
...viterbi algorithm progress:
[%]: .30..........10.....90..100...examining piece 747357..787464 (40108 bp)
..viterbi algorithm progress:
[%]: ...100.........70examining piece 9942135..9999986 (57852 bp)
.60..viterbi algorithm progress:
[%]: ........
.10..10.........40........Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_P is not significant enough, removed from profile.
.examining piece 7603915..7652159 (48245 bp)
..viterbi algorithm progress:
[%]: ...60...
....2020.........Warning: Block unknown_L is not significant enough, removed from profile.
.......................2030...................80...........10....40...examining piece 4931961..4993988 (62028 bp)
30..viterbi algorithm progress:
[%]: .........7050..30.......50.........examining piece 36064487..36108665 (44179 bp)
.......50..........10examining piece 25047427..25087513 (40087 bp)
.viterbi algorithm progress:
[%]: ...60.........40..............viterbi algorithm progress:
[%]: ............20......70....60....40.....40.10.90.....10.......8080.....................80...30..50.........50..................60....10......2090..Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
..Warning: Block unknown_W is not significant enough, removed from profile.
..........10....60.....30...70...................10060.................70..
..90........30...examining piece 37306340..37366017 (59678 bp)
.examining piece 15679265..15721039 (41775 bp)
.................viterbi algorithm progress:
[%]: .....20..80.80.......viterbi algorithm progress:
[%]: .....100.........20.......70...40............90..............90........100......20........
40100.....
....90...............80............30...100examining piece 21795405..21835620 (40216 bp)
..viterbi algorithm progress:
[%]: ......
.50..50...........................10....
...9030..10..........100............60....90
.Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.....40.30.....40.............examining piece 31282774..31333009 (50236 bp)
100....viterbi algorithm progress:
[%]: .examining piece 42672792..42736923 (64132 bp)
examining piece 12614826..12656035 (41210 bp)
viterbi algorithm progress:
[%]: ..20viterbi algorithm progress:
[%]: ..
........................60.....10.........70.........50..............20......10.......10........30examining piece 55866720..55906935 (40216 bp)
...........60..50..50.....30.viterbi algorithm progress:
[%]: ................4050........................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
..40....70.80........100...60...50...........7020...........20.examining piece 3057698..3101293 (43596 bp)
60.40..viterbi algorithm progress:
[%]: ......................60................70....
............Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
......40.....10.10..70................90........70......30............80....80.60....30...........80.....20.............100.examining piece 57367853..57423234 (55382 bp)
.....30.........viterbi algorithm progress:
[%]: .90...........9080............................100...10...50....20.......100........

.....10........40..100..30...
..
.....90...Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
..10...................90..examining piece 22048542..22088634 (40093 bp)
..viterbi algorithm progress:
[%]: ....50...50....20...20..........40.....40.Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.10...................60...100..........50...100..20..examining piece 13170846..13210950 (40105 bp)
.viterbi algorithm progress:
[%]: ..20...
.......30.............examining piece 40902228..40943157 (40930 bp)
..50....30..................10..30..Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
........30.examining piece 40619952..40668913 (48962 bp)
.viterbi algorithm progress:
[%]: ..............60.......viterbi algorithm progress:
[%]: ...100............................40......10...
....10..60..60...20...........examining piece 55339623..55380246 (40624 bp)
..viterbi algorithm progress:
[%]: ......40.70.40.
...............2030.......50...........................10.40....examining piece 17895968..17936144 (40177 bp)
.......viterbi algorithm progress:
[%]: .30............30...................60.60....10..20.............50......40...20....70....20...........60.....80..60........70...........50............30.50...........40...3080.....70..........40.......examining piece 20110201..20154049 (43849 bp)
.............examining piece 42620185..42660298 (40114 bp)
.......80viterbi algorithm progress:
[%]: .......viterbi algorithm progress:
[%]: .............60...60................5010...........................50...7080.....20....50........................60..70...70..30.90..30.....................70...80.40...........40............40.....................60....70............50.........50.......90....................100.........60...90...
60..80...................60.50......80....20.....80...70...................20.............90....90.....80................100......60.Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
.
.....70...70......60.90.....70..examining piece 38042457..38107660 (65204 bp)
70...viterbi algorithm progress:
[%]: ...........7070....................100..100...
...70.100..........
...50..
....80....Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.........90....80.............examining piece 1..10604 (10604 bp)
viterbi algorithm progress:
[%]: .....100....80....examining piece 33621368..33665616 (44249 bp)
10.......90.10......20...........viterbi algorithm progress:
[%]: ......30................40.........
..100.50...
.....70.......60............examining piece 30619010..30663746 (44737 bp)
....70...90.........80.............90.viterbi algorithm progress:
[%]: ..20............100.
........80.....10.90........70...examining piece 59857968..59898935 (40968 bp)
.....viterbi algorithm progress:
[%]: .........examining piece 31500310..31542568 (42259 bp)
.viterbi algorithm progress:
[%]: ...........20........908010.examining piece 53370474..53426239 (55766 bp)
.....examining piece 29524824..29565198 (40375 bp)
...viterbi algorithm progress:
[%]: ...100..30..viterbi algorithm progress:
[%]: ...........5020.............
..30..10...............30.............100................30
...4020..........40.........................50...............40..30................605040....30.............10............70..Warning: Block unknown_F is not significant enough, removed from profile.
70.....examining piece 37543978..37590508 (46531 bp)
10.viterbi algorithm progress:
[%]: ......9050..................examining piece 5377642..5417749 (40108 bp)
...80..40.80........viterbi algorithm progress:
[%]: ............10.......80....90...90.........50...............50......60......100..2010......
..........90...............60...20............30..80......30......70....................40....................70.50.....40...................Warning: Block unknown_B is not significant enough, removed from profile.
......60................60................70..8050.80.......examining piece 58811280..58858531 (47252 bp)
.viterbi algorithm progress:
[%]: .....20.....40..60................80...100.......8010...............60....................100....90.90...60..3020..60............
............
.............90.40..30................80..100....................5010010070.4050.
..........
........100................10..Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
..examining piece 1..11494 (11494 bp)
.viterbi algorithm progress:
[%]: ....50.....60...10.........
......702070........
.........30.........80........40..70....80......60.....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
.50.....70.................60....Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
........examining piece 25780042..25825197 (45156 bp)
....viterbi algorithm progress:
[%]: .....100...70...........................80.examining piece 25057257..25097388 (40132 bp)
.80viterbi algorithm progress:
[%]: ..100.......10..6070.........90....90..............90...
.examining piece 32904684..32956804 (52121 bp)
..10.....viterbi algorithm progress:
[%]: ....100.....
...........10...............8040..90.80..80.20.......10........examining piece 48544653..48607004 (62352 bp)
..20..viterbi algorithm progress:
[%]: .........80..........50
.......Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
.........................100........90.30...examining piece 34812009..34870038 (58030 bp)
100examining piece 1..21083 (21083 bp)
.viterbi algorithm progress:
[%]: .20.60.examining piece 25520262..25569768 (49507 bp)
examining piece 1..21513 (21513 bp)
90.viterbi algorithm progress:
[%]: .......10..........
10...viterbi algorithm progress:
[%]: .........10....viterbi algorithm progress:
[%]: .......20...........................30.............80.....4020.....70....................50
.30...30...................60...40................70....50.40...............20..80...60.......................90.70.........30....90.....70..100..
8010..............90.90................Warning: Block unknown_Q is not significant enough, removed from profile.
...100...
............Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
20.50.40....20.....examining piece 47356920..47414552 (57633 bp)
30..viterbi algorithm progress:
[%]: .........examining piece 21892001..21932111 (40111 bp)
..Warning: Block unknown_B is not significant enough, removed from profile.
40.Warning: Block unknown_AD is not significant enough, removed from profile.
.Warning: Block unknown_AF is not significant enough, removed from profile.
Warning: Block unknown_AI is not significant enough, removed from profile.
Warning: Block unknown_AN is not significant enough, removed from profile.
Warning: Block unknown_AP is not significant enough, removed from profile.
Warning: Block unknown_AQ is not significant enough, removed from profile.
Warning: Block unknown_AR is not significant enough, removed from profile.
Warning: Block unknown_AT is not significant enough, removed from profile.
.Warning: Block unknown_BA is not significant enough, removed from profile.
Warning: Block unknown_BF is not significant enough, removed from profile.
Warning: Block unknown_BG is not significant enough, removed from profile.
.....viterbi algorithm progress:
[%]: ....Warning: Block unknown_A is not significant enough, removed from profile.
..................30.........100.examining piece 22052727..22134079 (81353 bp)
10...viterbi algorithm progress:
[%]: examining piece 1605304..1681928 (76625 bp)
.....70..60.viterbi algorithm progress:
[%]: ...20.100.....50.........40.........
..
........10......................80.........100....20..........70......
..Warning: Block unknown_A is not significant enough, removed from profile.
......20.....90..100.examining piece 31662136..31702348 (40213 bp)
.viterbi algorithm progress:
[%]: ...Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
50..........60...........10.50................examining piece 21817723..21872313 (54591 bp)
.viterbi algorithm progress:
[%]: ...80........20.
....30.......examining piece 7843..32090 (24248 bp)
.viterbi algorithm progress:
[%]: ....................10...................30.20.80..10..10.....30.................40...30...................40.....40..............70......................50............50..30...........6050.....10060....40..2090....100.............70........10.............60.....8040...
examining piece 7903..32148 (24246 bp)
viterbi algorithm progress:
[%]: ...........................10.........90..............90.....20.....................9070100.
.60...30..30
60..80.............90....40....examining piece 1..30805 (30805 bp)
..viterbi algorithm progress:
[%]: ...........................10.........50.....80..........20...........................50...60...................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
.Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.....3070............70..40.............100.80....70..90..40.40........20......Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
..50...examining piece 14765335..14805559 (40225 bp)
........90.....90.....viterbi algorithm progress:
[%]: .
..50........................60.100.....
.............60....examining piece 67714836..67764113 (49278 bp)
.............viterbi algorithm progress:
[%]: ...10070.......100..70........
.................80........100.80.....1020.......
....80..
........80...80.90.50...examining piece 23710727..23750855 (40129 bp)
90viterbi algorithm progress:
[%]: ............20.10030...90..10.......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
..........6020...........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.

.............100...20......
.....examining piece 36856533..36909435 (52903 bp)
90.40viterbi algorithm progress:
[%]: 70...90......examining piece 48741233..48785189 (43957 bp)
.30viterbi algorithm progress:
[%]: .....................................40.......30...100...
10....40.......50.............30.10.....50.....10Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
..........20.60...............Warning: Block unknown_E is not significant enough, removed from profile.
........90.................70......examining piece 37113140..37160530 (47391 bp)
30viterbi algorithm progress:
[%]: ....examining piece 2074832..2128287 (53456 bp)
examining piece 75860711..75907010 (46300 bp)
.....viterbi algorithm progress:
[%]: .60viterbi algorithm progress:
[%]: ..60.40.examining piece 38174398..38228042 (53645 bp)
.........viterbi algorithm progress:
[%]: ..................8050.....10.examining piece 2606857..2656166 (49310 bp)
...viterbi algorithm progress:
[%]: ..........100......................10.....40.......90.20..20.......10.................
10..............10..70...............................30100.........20
60........70.20....5020.................20..........30......40.....................30...................50.30......30........50......70..60.......10030...........................4010......80....40...40...30Warning: Block unknown_A is not significant enough, removed from profile.
..
.........60.....examining piece 45225772..45273348 (47577 bp)
.viterbi algorithm progress:
[%]: ........70................40..................70...examining piece 41288788..41328874 (40087 bp)
50viterbi algorithm progress:
[%]: ...........10.50...50.80..........7010......50.............................80.........20.......................50.......80.......20....30.........80...60.....80......60....60...........9040..............40.............60............10040.Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
...............................30...30..50.50........90.9070....60.........90.....................examining piece 26488129..26535461 (47333 bp)
..7060viterbi algorithm progress:
[%]: .........................60......70.....90.....40..100.40..........80............
.....60...........100..70....80...
.......10.........100..80.........
.
...50..70...80...........50.......80......................Warning: Block unknown_K is not significant enough, removed from profile.
.70..........20....70..50.90......90.......90..examining piece 1532269..1596276 (64008 bp)
...Warning: Block unknown_C is not significant enough, removed from profile.
.......90.70...6090.....Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
viterbi algorithm progress:
[%]: ..............90...examining piece 14001059..14046446 (45388 bp)
...........100.100......80....viterbi algorithm progress:
[%]: 
.......Warning: Block unknown_F is not significant enough, removed from profile.
....80..............examining piece 62335010..62380301 (45292 bp)
.....30....60...viterbi algorithm progress:
[%]: ...................10..70......90.100examining piece 43614955..43661976 (47022 bp)
....viterbi algorithm progress:
[%]: .........10.....
.........90........100......2070
......80...90.
.Warning: Block unknown_E is not significant enough, removed from profile.
............................10..........examining piece 25701255..25745772 (44518 bp)
..8030viterbi algorithm progress:
[%]: .10..40.....80.90....................................8040.10.....20.4020.100....20.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
...........
90........20.........Warning: Block unknown_L is not significant enough, removed from profile.
...90..100..................60100........examining piece 46915586..46967451 (51866 bp)
.30
examining piece 8378187..8420814 (42628 bp)
..5090..viterbi algorithm progress:
[%]: .30.viterbi algorithm progress:
[%]: ...............examining piece 40866721..40910310 (43590 bp)
.viterbi algorithm progress:
[%]: ....................................50.40.............Warning: Block unknown_M is not significant enough, removed from profile.
.100..100.....
..10......30.1060.50..
..40..examining piece 23292874..23336610 (43737 bp)
.viterbi algorithm progress:
[%]: ....100.................................100........
.10...60..10.

........100..20........................20.........10020....50...........examining piece 48106674..48158959 (52286 bp)
....Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
30.....90........2060..viterbi algorithm progress:
[%]: .70
.30..40....70.examining piece 23487300..23533012 (45713 bp)
....viterbi algorithm progress:
[%]: ...................examining piece 16883437..16934133 (50697 bp)
..viterbi algorithm progress:
[%]: ......examining piece 27580110..27620523 (40414 bp)
................40.viterbi algorithm progress:
[%]: ......40..
30.80......examining piece 1..25089 (25089 bp)
..viterbi algorithm progress:
[%]: ..10..70...20.........................30.....10..10.Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
................60.....10..........Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.......2030.90..................20......50.......50.........30...........examining piece 6416328..6467780 (51453 bp)
............20.examining piece 1859068..1909374 (50307 bp)
.........40...........100viterbi algorithm progress:
[%]: ......viterbi algorithm progress:
[%]: 40..
....40..............20......30......Warning: Block unknown_A is not significant enough, removed from profile.
.....40........60..70.....30..20.30...50..50....................60....10......................examining piece 3092088..3138892 (46805 bp)
...60..40......viterbi algorithm progress:
[%]: ......100..........70..........40.80....70............
.70.......50....20..................10.............40..1030......80..............100.50.........50.....80...100.examining piece 22125188..22167399 (42212 bp)
..viterbi algorithm progress:
[%]: ..20.............70.60....................90..........
.20........10...........30...........................30........100...20.60......60.....60
..........30........50......90..40..80..40......
8030..80................................70......40examining piece 43218286..43258759 (40474 bp)
..viterbi algorithm progress:
[%]: ..........40.....40.70.....50...........................examining piece 24137437..24182449 (45013 bp)
1050..viterbi algorithm progress:
[%]: ....................50..................................20...60.10..........90..70.50.80Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
....60......60......30.....2090.....................50..................50.......40..........examining piece 12305514..12346083 (40570 bp)
.viterbi algorithm progress:
[%]: ....30..Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_J is not significant enough, removed from profile.
......70......................50......70.........60....90...40......10examining piece 23526863..23573090 (46228 bp)
...viterbi algorithm progress:
[%]: ........50.......70...........80.....90......60.......50..100...70.................20......80...
..........7010..........80.....90..60.....90................................8080...............30.....60.............100...20.70....
.....90...100..........................60
...........40.10100.
.80.80.90.......30..100....70..examining piece 1..13463 (13463 bp)
..viterbi algorithm progress:
[%]: ....90...............
.10..................20.....100examining piece 52297321..52346878 (49558 bp)
......90........50.30........examining piece 74666..114932 (40267 bp)
...viterbi algorithm progress:
[%]: .........viterbi algorithm progress:
[%]: .40..
...............70...100......50.......
..10.........40....100..........90.60examining piece 15642480..15683103 (40624 bp)
...viterbi algorithm progress:
[%]: .
................100......70.......10......20.60..80.....................80..90........10................100..30.
.......30............20.....50..
..20.....90............Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
..Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
70...100.40...Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
...70........
...30.30......80.100........examining piece 334697..374873 (40177 bp)
..viterbi algorithm progress:
[%]: .......examining piece 29824915..29868386 (43472 bp)
.40..viterbi algorithm progress:
[%]: ....examining piece 36407102..36452443 (45342 bp)
..viterbi algorithm progress:
[%]: ........10.50...90....................examining piece 26438765..26484594 (45830 bp)
..40..examining piece 2291234..2338748 (47515 bp)
..20.viterbi algorithm progress:
[%]: .10............viterbi algorithm progress:
[%]: .....................10...30.40.........80....10........80.......20.....
........40..50..60..20......................50....................50..20.30...................................60..30...4050......60.....60....50...10............examining piece 8192486..8232650 (40165 bp)
....viterbi algorithm progress:
[%]: ............70........50....70..........40.examining piece 16953638..16994713 (41076 bp)
..30...viterbi algorithm progress:
[%]: ...............................10..20...90..........10.....80.......60..examining piece 35700187..35750549 (50363 bp)
.......viterbi algorithm progress:
[%]: .....................100..........20....80......20...50....70..80.............70....90....30..30......40...10........60.............70.........................40..30..................100.............
....80....20.50.60.....4090.60.........
.................40....60....80.....100........50.....30..
.................70..............50....50.......100...............
...70......80..40..........Warning: Block unknown_I is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
..80.......90..60.20......10090............
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
90..examining piece 1..12946 (12946 bp)
.viterbi algorithm progress:
[%]: ...........60..........60.....10...100examining piece 26970822..27017548 (46727 bp)
........viterbi algorithm progress:
[%]: ..80...
..20.............5070......30..........Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.90.............40.Warning: Block unknown_E is not significant enough, removed from profile.
........80.examining piece 1..10632 (10632 bp)
.viterbi algorithm progress:
[%]: ......50............10.........60....10..............100....70.........20.........
.........80..........30Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
....70..........examining piece 47751597..47795441 (43845 bp)
90...60.40..........viterbi algorithm progress:
[%]: ..6080.70......100.....
..50....examining piece 34602618..34653028 (50411 bp)
...viterbi algorithm progress:
[%]: ............90.examining piece 19027155..19067364 (40210 bp)
.60.viterbi algorithm progress:
[%]: .20..1090.................90.....70..............100................70.80....10...20............10............90............Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.Warning: Block unknown_P is not significant enough, removed from profile.
.........80..60..100.
...20....9030..................70.........examining piece 33107903..33154063 (46161 bp)
....viterbi algorithm progress:
[%]: ......30.20.....30.............................30....100....................10100..40...
............
..30.90.....10080..........40
.100...examining piece 14170769..14210952 (40184 bp)
80...viterbi algorithm progress:
[%]: ...80...50.............10..............70.100.....
..20.examining piece 87910460..87958017 (47558 bp)
.......viterbi algorithm progress:
[%]: ..40.........20.........40...30.......................60.....40............50..100..........
....50.10.40..Warning: Block unknown_G is not significant enough, removed from profile.
..........90...........60............70.......5050..examining piece 26540087..26580344 (40258 bp)
..70.....viterbi algorithm progress:
[%]: ........................100....Warning: Block unknown_N is not significant enough, removed from profile.
..
....1080........Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
....................80.........30...2090.....60...Warning: Block unknown_C is not significant enough, removed from profile.
....examining piece 49226332..49283419 (57088 bp)
.......examining piece 30350898..30391047 (40150 bp)
..examining piece 71690386..71730547 (40162 bp)
........90..viterbi algorithm progress:
[%]: ....100.......
30.viterbi algorithm progress:
[%]: .60...
20..90.100.viterbi algorithm progress:
[%]: ..examining piece 20191670..20235393 (43724 bp)
...........90.80...viterbi algorithm progress:
[%]: .....1090.......60..........
..40.....50..40.................10............10............70................2050....20.
....Warning: Block unknown_F is not significant enough, removed from profile.
....60.....70..Warning: Block unknown_I is not significant enough, removed from profile.
.....100...30..............30......
........................30..20..40.examining piece 24274370..24314597 (40228 bp)
..viterbi algorithm progress:
[%]: ......70..........examining piece 64740454..64784394 (43941 bp)
...100...viterbi algorithm progress:
[%]: ..............50.....examining piece 36488513..36532443 (43931 bp)
.....viterbi algorithm progress:
[%]: .......50........
......1040......80.....70Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.8080....30.......10.........70............10.20......................examining piece 20685285..20728855 (43571 bp)
..viterbi algorithm progress:
[%]: Warning: Block unknown_D is not significant enough, removed from profile.
.90...................40.90...........60....30.....5060........100..10....examining piece 1..14711 (14711 bp)
viterbi algorithm progress:
[%]: ......examining piece 29484300..29527223 (42924 bp)
....20.......100......10..
.........viterbi algorithm progress:
[%]: ............20...40..........examining piece 13094786..13141548 (46763 bp)
..90..viterbi algorithm progress:
[%]: .......50.......2030..................................1040.....20.10........30......50.....50.............60...................2060..60.100............20..80..............70.................30...................80.......30......60100.................40.4060..90..............100.......30...........
....
......examining piece 874610..928831 (54222 bp)
..viterbi algorithm progress:
[%]: ..50100....30....
.....70................70..........40...60.examining piece 1..15597 (15597 bp)
.viterbi algorithm progress:
[%]: ......70...........70..4010.40..........50.............20.10.....70........................70.....30......80..................
80100.......40.50.............Warning: Block unknown_O is not significant enough, removed from profile.
...........examining piece 1..28594 (28594 bp)
...viterbi algorithm progress:
[%]: ..50.90...80..20.
..........
.........90...60................80......10.90...50....70................................70.Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
..80.100...
....Warning: Block unknown_O is not significant enough, removed from profile.
60....90...20..60...40..............90.3090...................100........90.examining piece 7595337..7639797 (44461 bp)

.30..100..viterbi algorithm progress:
[%]: ......
..........80.....Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
....80....examining piece 57452610..57510745 (58136 bp)
..................40.10viterbi algorithm progress:
[%]: ........70.80..examining piece 1519631..1562382 (42752 bp)
.....40......60......viterbi algorithm progress:
[%]: .90.........examining piece 45084632..45124868 (40237 bp)
...90viterbi algorithm progress:
[%]: ....60.50....70......100......20.......10Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
...........
................90............6080......10.20..examining piece 13702941..13751039 (48099 bp)
.....50.....Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
......viterbi algorithm progress:
[%]: .......100............30examining piece 26963506..27020522 (57017 bp)
.
...viterbi algorithm progress:
[%]: ........30.....50.....70.........1050...............................40........100.......60..examining piece 29040889..29082058 (41170 bp)
..viterbi algorithm progress:
[%]: .80
..20...........4010...5090.70..............80..............10...................30................Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_G is not significant enough, removed from profile.
..............70.90....60....20..............90.Warning: Block unknown_M is not significant enough, removed from profile.
.......20.......50.....examining piece 9819560..9859775 (40216 bp)
40..60..viterbi algorithm progress:
[%]: ...............70..........20...........examining piece 59551924..59592019 (40096 bp)
30.viterbi algorithm progress:
[%]: ............80..........................100....100
.1050..80.............90......
4030........80..........60.........90....100....20........................605060....70.examining piece 89584454..89643857 (59404 bp)
....viterbi algorithm progress:
[%]: ...70.................30.............40........100..100...............
...70...examining piece 5779088..5823766 (44679 bp)
...30.......viterbi algorithm progress:
[%]: .....examining piece 21678254..21726009 (47756 bp)
90.10..40.60....100viterbi algorithm progress:
[%]: ..........90
............100
...
................
10.10.............70........50...............20.80.70........80...90.....Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
.........10020.......30...
........70........5010..examining piece 12355826..12407089 (51264 bp)
10060.viterbi algorithm progress:
[%]: ..Warning: Block unknown_E is not significant enough, removed from profile.
...20.........40..........10........examining piece 217107..258894 (41788 bp)
viterbi algorithm progress:
[%]: .....30..80.....examining piece 26909338..26949757 (40420 bp)
.examining piece 29287683..29375307 (87625 bp)
.....100..viterbi algorithm progress:
[%]: .......50..Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.....
....viterbi algorithm progress:
[%]: .....80....10.....................10............70.....examining piece 11448300..11513343 (65044 bp)
10
Warning: Block unknown_H is not significant enough, removed from profile.
.viterbi algorithm progress:
[%]: ......4090....40.60.....20..................90...........examining piece 3171937..3233620 (61684 bp)
60.viterbi algorithm progress:
[%]: .....examining piece 1..16630 (16630 bp)
.viterbi algorithm progress:
[%]: .........30...............10...........30..10............20...........10............30.70.......50...................40.80......40..........10.....8050.20...................80...60...........100...................70....
......50...........80..80.examining piece 36456105..36497206 (41102 bp)
...................90......viterbi algorithm progress:
[%]: .....20100........20......100...
.20..6090.....60...
40...........70..............90.......................100........30.10examining piece 13299652..13342393 (42742 bp)
70...viterbi algorithm progress:
[%]: ..................100......30.30
.............100...30........80
70..............examining piece 15793845..15837428 (43584 bp)
.Warning: Block unknown_H is not significant enough, removed from profile.
20..viterbi algorithm progress:
[%]: ...........80........
......examining piece 26175919..26229476 (53558 bp)
............viterbi algorithm progress:
[%]: ..90..9030.................40............10..40...10..............50.........Warning: Block unknown_A is not significant enough, removed from profile.
......40........4020..20100.......90.....100.......
..................80examining piece 45939785..45983372 (43588 bp)
.30viterbi algorithm progress:
[%]: ...........40..20.........20......10....10..............examining piece 26722840..26767968 (45129 bp)
.90..40............50.viterbi algorithm progress:
[%]: ..........
...50.....20...90......examining piece 21623785..21667907 (44123 bp)
....viterbi algorithm progress:
[%]: .......10.....................50..Warning: Block unknown_A is not significant enough, removed from profile.
..........10........30............2030.............20............................examining piece 516425..556649 (40225 bp)
...viterbi algorithm progress:
[%]: ...30.30..........................10040..20.60.....40.............10....1060......
.10040........5090.50.....70.....50
......30............100.................20..50.50.......60........examining piece 23978923..24031197 (52275 bp)
...viterbi algorithm progress:
[%]: .......4070.........60......................30..60......100................20..
......10.........70.....6060...100.....50...40.......
30...30Warning: Block unknown_A is not significant enough, removed from profile.
40.Warning: Block unknown_F is not significant enough, removed from profile.
.......70...50...............20......80.......80...............40....70..........examining piece 20694020..20736010 (41991 bp)
...viterbi algorithm progress:
[%]: ........80...60.50.......90..............50...........70.....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.30.............................100..........
90..60.1060..........................70............40.........examining piece 58905800..58956228 (50429 bp)
.......80.....Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
......examining piece 19438..43122 (23685 bp)
.viterbi algorithm progress:
[%]: ...70..7020..........viterbi algorithm progress:
[%]: ...........20.10.............80...100............
..20........50.80.9050Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
....60.........3080..........Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
......30....80..........60..........
......4010090..40......examining piece 6874635..6937842 (63208 bp)
....viterbi algorithm progress:
[%]: .......70............90..........50.40...............examining piece 27286548..27336762 (50215 bp)
.....
90..viterbi algorithm progress:
[%]: .....100..70..90.
60.90..........60.....80.......30............70..........Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.................Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
Warning: Block unknown_AB is not significant enough, removed from profile.
Warning: Block unknown_AJ is not significant enough, removed from profile.
.Warning: Block unknown_AN is not significant enough, removed from profile.
........50.10.80.........60.100..........examining piece 1334800..1420868 (86069 bp)
100.
.....10...
.viterbi algorithm progress:
[%]: .90.......examining piece 20185477..20244984 (59508 bp)
..viterbi algorithm progress:
[%]: ...........examining piece 1..20565 (20565 bp)
...viterbi algorithm progress:
[%]: .....100...70.........
..examining piece 8564676..8617374 (52699 bp)
..viterbi algorithm progress:
[%]: ..90..10060........
.........10.........20..........10...60..90....20.....80....................8010.............80..........3070Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
..........20...................20...examining piece 31878306..31931310 (53005 bp)
.70.40..30.......examining piece 23747613..23789597 (41985 bp)
..........examining piece 35554524..35614679 (60156 bp)
viterbi algorithm progress:
[%]: .....20......viterbi algorithm progress:
[%]: ...........viterbi algorithm progress:
[%]: ..1050....50..........................100..90..10..80........
...70.....60......examining piece 3023895..3071244 (47350 bp)
10....viterbi algorithm progress:
[%]: .....................................2030....40..70.......10.30...30........................30....................2080...........40.90...........20100.........50...........90.
......90............50.4080........................30..Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
30........10.......100.....70.40
60.......100.50..20
......examining piece 22080166..22120666 (40501 bp)
.viterbi algorithm progress:
[%]: .................................401070..........50...........80.................100..Warning: Block unknown_A is not significant enough, removed from profile.
40...........20....80....4060..........40............100.............examining piece 38424301..38466637 (42337 bp)
.viterbi algorithm progress:
[%]: .80...50.50...50...........30..examining piece 20544715..20584846 (40132 bp)
.90..viterbi algorithm progress:
[%]: .......examining piece 10956388..11016820 (60433 bp)
...60.viterbi algorithm progress:
[%]: ...............10....70...........60....10......................100..........20....
.40.......
...100..60.10
.....20..
...........30...30.10.....................60.................80....40....30.................50.........2070..................50....40....70....70.....................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
.60.................60.....9050.....3050.........809090examining piece 34804316..34847744 (43429 bp)
..........70...60.................8070viterbi algorithm progress:
[%]: ........60........................examining piece 57310970..57358067 (47098 bp)
..viterbi algorithm progress:
[%]: ..examining piece 8547399..8597915 (50517 bp)
....viterbi algorithm progress:
[%]: ...............80.examining piece 45746554..45790136 (43583 bp)
...100.4080.............
.viterbi algorithm progress:
[%]: ..90.................30..801070.............70...10.........10............................90...20.70..20............examining piece 1..22482 (22482 bp)
.90viterbi algorithm progress:
[%]: ........40...............80......30..70..............80.....100..80...30........
.4050..20...10......................100..................50.
...20.40........90..............................examining piece 1..21688 (21688 bp)
...60100viterbi algorithm progress:
[%]: ..............30...50..........90..90..40....30.50.............70................40.............................................50.60..1080.....60..50...80.............................20........100......60.100........100.40..
...606060
.....30.........70............90.......
.100....40....100..........examining piece 30133460..30173849 (40390 bp)

...viterbi algorithm progress:
[%]: .......
70......70.........50............9010.......80..............
.....80..60......................2080..............70...90...50..90.90..........70..............30.....80....Warning: Block unknown_G is not significant enough, removed from profile.
...........90....100....
.....90...examining piece 45776626..45816985 (40360 bp)
..90.Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
viterbi algorithm progress:
[%]: .40Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
....70............100....100...
......examining piece 47021582..47094012 (72431 bp)
...100.viterbi algorithm progress:
[%]: .
.examining piece 6816427..6856945 (40519 bp)
50viterbi algorithm progress:
[%]: .....examining piece 43860437..43900517 (40081 bp)
....viterbi algorithm progress:
[%]: ....................100..60...
...10..
10.........60...Warning: Block unknown_B is not significant enough, removed from profile.
............examining piece 43948932..44016110 (67179 bp)
viterbi algorithm progress:
[%]: ................20.......60..10..20......examining piece 24775091..24830300 (55210 bp)
.viterbi algorithm progress:
[%]: ..70Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
............80............100.30.......10..100......90....examining piece 17984750..18027120 (42371 bp)
..viterbi algorithm progress:
[%]: ..examining piece 55257386..55297829 (40444 bp)
..viterbi algorithm progress:
[%]: ........examining piece 33082182..33122337 (40156 bp)
.
..80103070...............examining piece 34385624..34425701 (40078 bp)
......2040..........viterbi algorithm progress:
[%]: ......viterbi algorithm progress:
[%]: ............10.10..
....................20.1090..10.70......20........100.examining piece 1..15730 (15730 bp)
..viterbi algorithm progress:
[%]: .....40.........10...50....examining piece 1..14510 (14510 bp)
..viterbi algorithm progress:
[%]: .....................20...10..20...............20....20.........30...............30.................
.2040..40..Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
..................100.........50...50..................
.60......90.....60..30.............70.......10.......70..60..........3080...................80.90..50.30..............examining piece 52519888..52560067 (40180 bp)
.....100viterbi algorithm progress:
[%]: ...9030..
...............40....100...
.......Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
.......examining piece 1..19432 (19432 bp).
viterbi algorithm progress:
[%]: .10.Warning: Block unknown_D is not significant enough, removed from profile.
..Warning: Block unknown_R is not significant enough, removed from profile.
........examining piece 1..21424 (21424 bp)
....viterbi algorithm progress:
[%]: .......................80....10..50................70.....2010.....40.........40.......20............Warning: Block unknown_F is not significant enough, removed from profile.
............40......20...........20....20........30..30.60...............100...20....60...................1050.....examining piece 33046968..33090670 (43703 bp)
.30.viterbi algorithm progress:
[%]: .......80...40.............40...............30..50..
.100......................1030...........80.....70..50.....
........40..................40.......20....50...........30.........60........50...60..90................50.......308090..50....90............70...............60..........................60.70.40.....60..........60..............70.......70.......100.........examining piece 11981992..12036097 (54106 bp)
30
...viterbi algorithm progress:
[%]: .........50......................7070.70...40..........100.............80..10.............
....70.....60..60..........examining piece 42999415..43041851 (42437 bp)
.....80.........80...90...........80...40..80...100.viterbi algorithm progress:
[%]: ...90......20.............80.
.....70examining piece 1..15043 (15043 bp)
viterbi algorithm progress:
[%]: ...............examining piece 68922210..68962689 (40480 bp)
..viterbi algorithm progress:
[%]: ..............10..20....90.80...examining piece 24675069..24715548 (40480 bp)
..90.viterbi algorithm progress:
[%]: ................9020....................10....100............30............30..
.10..5080.............40.....80.............20...............20................50.......100.................100...60...3030.
100.....
examining piece 1..16992 (16992 bp)
70..viterbi algorithm progress:
[%]: ....................70...........
....10.........4090........20..80.....40....40.....20.........90......40................90........3050..............50...................100...40....
.......................50....60.80.....60....examining piece 1..11823 (11823 bp)
.viterbi algorithm progress:
[%]: ....90.....100.....60.........90.
.10..................20.Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
..............70..50...3070..50.70...................9040Warning: Block unknown_A is not significant enough, removed from profile.
80Warning: Block unknown_G is not significant enough, removed from profile.
10..80..Warning: Block unknown_F is not significant enough, removed from profile.
...............60.....50..........................6090examining piece 17597381..17689668 (92288 bp)
....examining piece 40064270..40107729 (43460 bp)
....viterbi algorithm progress:
[%]: .....100.........70.80.........viterbi algorithm progress:
[%]: .........
100.examining piece 27056411..27096569 (40159 bp)
....
viterbi algorithm progress:
[%]: ..80examining piece 53720357..53760506 (40150 bp)
.............80.................10....90viterbi algorithm progress:
[%]: .................60..........10.90..100.30......
..........90.......20.........100..90........10..........10..20........
....100...100...examining piece 30946361..30986468 (40108 bp)
...
30.............30........100.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.
..
30.viterbi algorithm progress:
[%]: ............Warning: Block unknown_D is not significant enough, removed from profile.
......40..90.......70.............examining piece 386328..434575 (48248 bp)
..examining piece 2551495..2591629 (40135 bp)
viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: .............examining piece 27471070..27526582 (55513 bp)
...viterbi algorithm progress:
[%]: ..20....40504010.............................................20........70...50....60examining piece 56081824..56130498 (48675 bp)
examining piece 39314400..39359076 (44677 bp)
.....viterbi algorithm progress:
[%]: ..60....50.viterbi algorithm progress:
[%]: ......examining piece 9373965..9429159 (55195 bp)
.....viterbi algorithm progress:
[%]: ........30..80.....20......10.......10..................50.....10........60....40......7010..................................100..............50..20......30...
.20............................7080.....4080..60.............90.....20...60.......30..20..................70..30............100.20..90.100.80examining piece 44758147..44813157 (55011 bp)
...viterbi algorithm progress:
[%]: .............................80......8040....................50...Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G. is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
.........30.............1040.
100.90......
90.40.......examining piece 31544362..31584469 (40108 bp)
viterbi algorithm progress:
[%]: ........100.................30.....
..........5010.10.......
............70.2070.....3040.100......
......100......20.............
...20........30.50............Warning: Block unknown_H is not significant enough, removed from profile.
.Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
.....30..60.30.................100...examining piece 24704220..24785765 (81546 bp)
...........examining piece 28793462..28834527 (41066 bp)
10Warning: Block unknown_B is not significant enough, removed from profile.
...50.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
50.30...40..viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: .60.............40............examining piece 28837144..28884013 (46870 bp)
.......examining piece 16513166..16556094 (42929 bp)
.viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ...90..10........Warning: Block unknown_I is not significant enough, removed from profile.
......40....70.......60......10.........10...............20........60...........examining piece 16694805..16736566 (41762 bp)
..examining piece 56226201..56279575 (53375 bp)
viterbi algorithm progress:
[%]: ...viterbi algorithm progress:
[%]: .50.....6020..............90..................................50.10..30
...70............80100......30...80.40.......70.....10...8040........20......8020...............50.........40.........70...40...................................90........30..........60..20......60...........50..................50......100.90..........
..80..40.....
.....80........30.........60..........70............30..................5070examining piece 1..34670 (34670 bp)
..viterbi algorithm progress:
[%]: ..6050...........................Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
......10.....60........60........30.....................5020.............examining piece 31525531..31575161 (49631 bp)
....viterbi algorithm progress:
[%]: ...70....90....507080.30.....10040...........90.........
.................40........80.60......60........80..........50............10..........70...9090.......60...............40.....................80.....90...70.70....100.....20.....100...
70.....
.........50.....................80..20...90........80.............100......90..90..........4070..
..examining piece 14949347..14989721 (40375 bp)
.....80.........100......10....viterbi algorithm progress:
[%]: ....100.....
90..........
10.....70.............30.....Warning: Block unknown_E is not significant enough, removed from profile.
..examining piece 8816783..8865517 (48735 bp)
...2020........viterbi algorithm progress:
[%]: ..................100.......30.60....
..100..50.90........100....90100...30
.40....examining piece 41379395..41422682 (43288 bp)
examining piece 52268304..52324408 (56105 bp)
...viterbi algorithm progress:
[%]: .
.viterbi algorithm progress:
[%]: .........10Warning: Block unknown_B is not significant enough, removed from profile.
......
............10......50..examining piece 29804060..29844227 (40168 bp)
...viterbi algorithm progress:
[%]: ....10...40...................20........examining piece 40796948..40876557 (79610 bp)
.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.10..40....................30..................60.20........20.....viterbi algorithm progress:
[%]: ..2040..examining piece 33177009..33221266 (44258 bp)
.....................30...................viterbi algorithm progress:
[%]: .....50.50...............Warning: Block unknown_G is not significant enough, removed from profile.
.....40............10....60....examining piece 29041189..29084049 (42861 bp)
.80.viterbi algorithm progress:
[%]: ...70...30..................5050...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
...70.100.........30.10..
..........................examining piece 83147400..83194805 (47406 bp)
...viterbi algorithm progress:
[%]: .60.......examining piece 19880569..19931749 (51181 bp)
80.....20.examining piece 42654832..42698496 (43665 bp)
..viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: .20..60.....60..........9040............................................90..30..............10..40...........1010......................70...........4010040...........
........30.....................20.20...60......70....50.........50...30........20........70...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.80.70.......80..Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_E is not significant enough, removed from profile.
.....30.30.......60..................100...examining piece 12333870..12374448 (40579 bp)
.90viterbi algorithm progress:
[%]: ........................10....
.....80.......50.examining piece 7761732..7802463 (40732 bp)
90...8040..viterbi algorithm progress:
[%]: .10.40.........80...70.30.................60......................10..........20.....................examining piece 1..28564 (28564 bp)
.viterbi algorithm progress:
[%]: ..80.10070.....50....50.........
...................20.......................30................50...40......50....90....10....40..90......7090......60...........................60.............8040...60........100..30...20..........60.100.....
.............................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
..60...8070....
....50.70....5080......80.....30........70...............100..............examining piece 43700814..43742385 (41572 bp)
....................viterbi algorithm progress:
[%]: .......20.80......40.100...........
.60.70..80
.....10......................80.100..................................60.50..9020.
...90.....90....70...........80..90...examining piece 51708991..51759025 (50035 bp)
viterbi algorithm progress:
[%]: .........Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
........90..60.....30...........70.....Warning: Block unknown_A is not significant enough, removed from profile.
..60.examining piece 14243708..14298642 (54935 bp)
.....viterbi algorithm progress:
[%]: ................90...........examining piece 20935659..20981414 (45756 bp)
..viterbi algorithm progress:
[%]: .40...40..........100.10..........
........10..................10100100..100.......90....70......
..
.50..9020......Warning: Block unknown_U is not significant enough, removed from profile.
...90.........70.....80........30.......Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
.............20..........60.examining piece 23529872..23570777 (40906 bp)
.viterbi algorithm progress:
[%]: .......40..20..................80.......examining piece 31642178..31698369 (56192 bp)
...............30...viterbi algorithm progress:
[%]: ..1050.......70.100........Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_X is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
Warning: Block unknown_Z is not significant enough, removed from profile.
Warning: Block unknown_AE is not significant enough, removed from profile.
Warning: Block unknown_AF is not significant enough, removed from profile.
.......
....40...60....30....examining piece 32445950..32495988 (50039 bp)
...viterbi algorithm progress:
[%]: ...6090....100.....100...............examining piece 57926018..57977831 (51814 bp)
...
viterbi algorithm progress:
[%]: .......90.....1050.examining piece 8249570..8289707 (40138 bp)
....
.viterbi algorithm progress:
[%]: ..80..........
.10............3070....90...20.............10....60....70...............100.......40....................20...20...............70......80.........................20.....30.100..100.30.100.......
.30......40.....

..Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
......80....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
......90....examining piece 1..26332 (26332 bp)
....viterbi algorithm progress:
[%]: ............1040.examining piece 14588074..14630266 (42193 bp)
.50..viterbi algorithm progress:
[%]: ....50...........90..
...40.examining piece 25916177..26002530 (86354 bp)
.....50.70..............90.....examining piece 68296305..68338930 (42626 bp)
.......104030..........50......viterbi algorithm progress:
[%]: ..............100..10..........
..........viterbi algorithm progress:
[%]: .Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
............20............50100......40.5060...
..20.....examining piece 32191524..32246604 (55081 bp)
.....viterbi algorithm progress:
[%]: .Warning: Block unknown_L is not significant enough, removed from profile.
60.....................50..................3060.....30....examining piece 13791784..13851847 (60064 bp)
........viterbi algorithm progress:
[%]: ..examining piece 46124403..46173828 (49426 bp)
...examining piece 8879677..8923338 (43662 bp)
......viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: ................80......60....70.........70.....1020.....40........40.......10....................100.......20..1010........10.........10..80.......80........examining piece 26835910..26876125 (40216 bp)
..................
....503050...........50.70..........viterbi algorithm progress:
[%]: ......................80..examining piece 34548636..34605367 (56732 bp)
..............10......2040.........70.20..viterbi algorithm progress:
[%]: .60.20..................2060....6080...........60.90.........100..........50.60............20...70....30.........................90................40....70......40......60...80............80........................50..30.30..100.......70...
.80..................80....7080100.............90....
.......................Warning: Block unknown_D is not significant enough, removed from profile.
....90..examining piece 1..10276 (10276 bp)
30viterbi algorithm progress:
[%]: ..........80..10.........
......20......7030........Warning: Block unknown_D is not significant enough, removed from profile.
30.............examining piece 1..10276 (10276 bp)
viterbi algorithm progress:
[%]: .8040..................50.90..10..........20.......60.20.....60..100........100...70........30...........80...examining piece 34264418..34312972 (48555 bp)
....40..............Warning: Block unknown_D is not significant enough, removed from profile.
.90.
...........50...examining piece 1..10276 (10276 bp)
.viterbi algorithm progress:
[%]: ...100......
......viterbi algorithm progress:
[%]: ..60...7010.................90..20.....70...........40.....30............80.........40................90.......50.................100..60.
.....100........70..
.........100....80.......10.......90...
........100
.......90.examining piece 1..25685 (25685 bp)
....viterbi algorithm progress:
[%]: ..90................Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
..9010..........Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.20....20.......80...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_X is not significant enough, removed from profile.
.......4030..................Warning: Block unknown_F is not significant enough, removed from profile.
.40............examining piece 12680714..12731214 (50501 bp)
100.viterbi algorithm progress:
[%]: ....examining piece 33231789..33278281 (46493 bp)
.viterbi algorithm progress:
[%]: .50..........50....examining piece 11950471..12000627 (50157 bp)
...30..100.....60......40..........
..viterbi algorithm progress:
[%]: .examining piece 7680785..7720973 (40189 bp)
..70viterbi algorithm progress:
[%]: .....10.30..10...................80......100....examining piece 129685..170722 (41038 bp)
....viterbi algorithm progress:
[%]: ...10..........................70.......90............10............20.80..
.....90.20...100.
40.....90.........20..
.......60.20............
100.30...........30.....Warning: Block unknown_E is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
...........
......30............4050...60........50..Warning: Block unknown_G is not significant enough, removed from profile.
examining piece 24872118..24912273 (40156 bp)
.viterbi algorithm progress:
[%]: ......30........4040Warning: Block unknown_B is not significant enough, removed from profile.
30....40.........................50..10...examining piece 44720697..44770468 (49772 bp)
....viterbi algorithm progress:
[%]: ..................examining piece 59239775..59279939 (40165 bp)
.50viterbi algorithm progress:
[%]: .....................................1060100.....10........60..40...
.......20.10.....50...Warning: Block unknown_F is not significant enough, removed from profile.
............80....20..60...........70................100..50.90....examining piece 56566188..56606292 (40105 bp)
..viterbi algorithm progress:
[%]: .............................20.30...1070.30...........examining piece 59834133..59890205 (56073 bp)
......80..viterbi algorithm progress:
[%]: 70.....
.....................5020........70.........60.40..............90...........30........30........Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
.....9040..50................80...10..40Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
50.60...........80...........examining piece 2528693..2569223 (40531 bp)
.....viterbi algorithm progress:
[%]: .................................50............100...70.........60..examining piece 42139326..42184231 (44906 bp)
.
....90..10..Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.........40...viterbi algorithm progress:
[%]: ....50.......60....90...............examining piece 24546969..24596713 (49745 bp)
..20viterbi algorithm progress:
[%]: ................................100......70.102060.....
....70..10..60...80...............80........................50..........80.........60.80...100.20..30.......30..........
100..Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
...............100.....examining piece 58175953..58216138 (40186 bp)
.viterbi algorithm progress:
[%]: ............90.......examining piece 3691365..3731520 (40156 bp)
........10....70.90..60.7090............viterbi algorithm progress:
[%]: ..........30..20......................40...........7060.30..100...examining piece 1..19060 (19060 bp)
..viterbi algorithm progress:
[%]: .............

..100..100
10...................20
40.........40.....30....................7040........70.examining piece 3278..38445 (35168 bp)
....viterbi algorithm progress:
[%]: ...50.....40..........609050................
........70.............10050......80..10.........
......90.60...................100..80
......40.........70...........7020.......................8050......Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
..examining piece 46633275..46682072 (48798 bp)
.80...examining piece 24898435..24941035 (42601 bp)
..80viterbi algorithm progress:
[%]: ....Warning: Block unknown_N is not significant enough, removed from profile.
........40viterbi algorithm progress:
[%]: ........3050...60...........90.10.................examining piece 16508124..16563738 (55615 bp).
..viterbi algorithm progress:
[%]: .....examining piece 20032629..20085057 (52429 bp)
.....90..Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
....viterbi algorithm progress:
[%]: .Warning: Block unknown_L is not significant enough, removed from profile.
............20..................10......4080....................70..10.examining piece 44211258..44253013 (41756 bp)
...10030.....60......
........10.examining piece 38456940..38503824 (46885 bp)
.viterbi algorithm progress:
[%]: ...viterbi algorithm progress:
[%]: .6090........40..10010......................90.......70.........50.......2010....10.20..
....50.....................90.70.......................20......20..................2020..30....................60..90.........60.30....................30.................examining piece 53791692..53832693 (41002 bp)
...30.80..................40..40.70.........viterbi algorithm progress:
[%]: .....3080..90...70..............50.......................40.....50...80100...........80examining piece 6539385..6579612 (40228 bp)
viterbi algorithm progress:
[%]: .....40......................
.70.......50...100...............90...10......90..60...50..........40.80.10..........
............20..........................100...80....90....
.........90100608030..
...70...50....................................40.100....20...Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
..............
....80.......examining piece 19271426..19317401 (45976 bp)
..50...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
..50..Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
........viterbi algorithm progress:
[%]: .100.90...examining piece 30516140..30577722 (61583 bp)
......70.viterbi algorithm progress:
[%]: ..80................examining piece 26474990..26515121 (40132 bp)
.viterbi algorithm progress:
[%]: ............10...60.....
....10...60100.10.90.10.100...90......
.......50........20......
........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.Warning: Block unknown_T is not significant enough, removed from profile.
.....examining piece 45478467..45524131 (45665 bp)
..viterbi algorithm progress:
[%]: ......20.......20...........................20...70...100..examining piece 35849156..35889254 (40099 bp)
10viterbi algorithm progress:
[%]: .30...30.....100..60.........
...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.Warning: Block unknown_A is not significant enough, removed from profile.

Warning: Block unknown_F is not significant enough, removed from profile.
.........100examining piece 1..16572 (16572 bp)
.viterbi algorithm progress:
[%]: .examining piece 1..17631 (17631 bp)
..viterbi algorithm progress:
[%]: ....................20......10.......10.60...10.......................40.20.......20........40................30...30.............30.....3080..............40........70.................40..20....60...50.Warning: Block unknown_F is not significant enough, removed from profile.
..50.......90....................50.40.....5060..........70..........
......Warning: Block unknown_E is not significant enough, removed from profile.
.Warning: Block unknown_I is not significant enough, removed from profile.
...60...........70..examining piece 45928110..45968355 (40246 bp)
.........................40viterbi algorithm progress:
[%]: ...70...............80305060..examining piece 14433114..14484054 (50941 bp)
....90viterbi algorithm progress:
[%]: ..................10........Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
.80.............examining piece 2561155..2603148 (41994 bp)
examining piece 1..12193 (12193 bp)
.viterbi algorithm progress:
[%]: ..90viterbi algorithm progress:
[%]: ..30......60......................80.....10.....90.20..............10.......100....100.............
....70...........90..2010.....100........
.60...30.4070.50....30.............Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
.......20.....examining piece 1..12195 (12195 bp)
.viterbi algorithm progress:
[%]: ........40...................Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
.....20......examining piece 1..12193 (12193 bp)
viterbi algorithm progress:
[%]: .40........20..50....100...3010.....................50.................60...20.........
1090................3070...50...
........30.....20.70.....................80................40......30...30............80.............50..........50..40.40.................................90.60.....6050............40........Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
..........30.40....examining piece 1..13533 (13533 bp)
viterbi algorithm progress:
[%]: ..........70.6080.......100...80..........
...............10..................90.70..80..........20...............70...................50.90..80....30..100......60........100...50.....................
..
.9010050...40
.............90..............60.........60100...
...50.........100............Warning: Block unknown_B is not significant enough, removed from profile.
.....examining piece 1..17957 (17957 bp)
viterbi algorithm progress:
[%]: ....8060...Warning: Block unknown_B is not significant enough, removed from profile.
.
........Warning: Block unknown_I is not significant enough, removed from profile.
examining piece 1..17957 (17957 bp)
viterbi algorithm progress:
[%]: ..10.............80...........10.examining piece 57569229..57614521 (45293 bp)
.60.Warning: Block unknown_B is not significant enough, removed from profile.
..20........examining piece 1..18233 (18233 bp)
...viterbi algorithm progress:
[%]: ...viterbi algorithm progress:
[%]: .....70......70..100..20...30.........10..
......Warning: Block unknown_I is not significant enough, removed from profile.
....................30..40............2080.........70.......100.......40...........5070......examining piece 71540275..71584643 (44369 bp)
.1030..........90....40............50..6060..90..40.....
..viterbi algorithm progress:
[%]: ............examining piece 15636818..15681001 (44184 bp)
.....viterbi algorithm progress:
[%]: .........80.70.........2050.....60...20...................80.......100.........70.70.
..60...30............70.100......90...................10...........70.....100
Warning: Block unknown_I is not significant enough, removed from profile.
...80
......90.......examining piece 15952313..16013902 (61590 bp)
.....viterbi algorithm progress:
[%]: .............80....9020............................30......90.....examining piece 60652919..60700415 (47497 bp)
.......100....80..
...............70100...examining piece 1..18414 (18414 bp)
..viterbi algorithm progress:
[%]: .
.viterbi algorithm progress:
[%]: .8030Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
...40..100..............10......
........Warning: Block unknown_G is not significant enough, removed from profile.
.....20...10.examining piece 1..12292 (12292 bp)
.viterbi algorithm progress:
[%]: ..............Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.....30....10...................examining piece 2662017..2709243 (47227 bp)
....40viterbi algorithm progress:
[%]: ....20...................5090..50.....40...30...................100........60.40.....................80...
...50.........70....50..10..................examining piece 45152082..45206698 (54617 bp)
....viterbi algorithm progress:
[%]: .....60...80.....60............Warning: Block unknown_Q is not significant enough, removed from profile.
50......90.....90.....90.Warning: Block unknown_I is not significant enough, removed from profile.
.......70........80.........902010060..
...........80...70..examining piece 16749010..16789246 (40237 bp)
..viterbi algorithm progress:
[%]: .20..........10.............70.examining piece 54834683..54882949 (48267 bp)
...90...viterbi algorithm progress:
[%]: .........................60..10...examining piece 2156402..2204206 (47805 bp)
..100...70...
.........................viterbi algorithm progress:
[%]: ......20...............10.Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
..Warning: Block unknown_AA is not significant enough, removed from profile.
.....30....20...................30....1070..100...........80...........
.......Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
10.examining piece 21551395..21596197 (44803 bp)
...40......90..viterbi algorithm progress:
[%]: ......40........100.........20.....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.

100...50..examining piece 27728003..27769065 (41063 bp)
...8040..30....
20............90.viterbi algorithm progress:
[%]: ......................60........60....30........90.100....examining piece 50892535..50939380 (46846 bp)
.viterbi algorithm progress:
[%]: ....................Warning: Block unknown_G is not significant enough, removed from profile.
..3090..304070.................40.........................examining piece 9179324..9235726 (56403 bp)
50....viterbi algorithm progress:
[%]: ..10.....10...100.........80.........
...40...
....100........Warning: Block unknown_A is not significant enough, removed from profile.
...
...40............10......50.....40examining piece 12768149..12809520 (41372 bp)
90..viterbi algorithm progress:
[%]: ..100.........20.examining piece 2840316..2881437 (41122 bp)
...viterbi algorithm progress:
[%]: .50.50...............50....8010080...10...................
........
....Warning: Block unknown_A is not significant enough, removed from profile.
20............60..100....10...60......30........
80..............10Warning: Block unknown_F is not significant enough, removed from profile.
........40examining piece 9665904..9705984 (40081 bp)
..viterbi algorithm progress:
[%]: ......70.70......................60..50.20..30.................10...............60.examining piece 249359..291093 (41735 bp)
.examining piece 11687209..11750128 (62920 bp)
80viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: ..60.....50.......60....50....................70........30...20..........10...............70.......80...10...................40.....examining piece 9818221..9873724 (55504 bp)
.........viterbi algorithm progress:
[%]: .........2090..........30..40.......70..............20...............Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.....100......
..30..examining piece 9476099..9519436 (43338 bp)
......20...70.........70....viterbi algorithm progress:
[%]: ..........10..40................50..examining piece 49051456..49091554 (40099 bp)
....viterbi algorithm progress:
[%]: ...40..........10.................60.8050...30........80............................20..50........10......................................80..5030.3060.30....20..Warning: Block unknown_C is not significant enough, removed from profile.
....20.80.4060....60...............20..................................................40....70..............examining piece 28556178..28596273 (40096 bp)
90viterbi algorithm progress:
[%]: .60......60....40..............70..................9070....10...50....50.........30...........80..80......90............40.........20....20......70.....................90....50....60............30.90.................80.9030...................100....20.30.............60.............
....70..70...............40........4080........100....
...80.........60...........90.40..100....70...........50
.90................50.............10070.....
.10.......100.........100......40....
...
90...60.....50.....80.......90....70...50Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
30..examining piece 1..26957 (26957 bp)
..viterbi algorithm progress:
[%]: ..80......examining piece 11686749..11726859 (40111 bp)
.......90...viterbi algorithm progress:
[%]: ...........100...........10................70..
80.20............60.................10..30........examining piece 15466813..15513553 (46741 bp)
....100.....viterbi algorithm progress:
[%]: ...........examining piece 87207417..87253912 (46496 bp)
..40.examining piece 13215026..13273639 (58614 bp)
.......
..........viterbi algorithm progress:
[%]: .........80......viterbi algorithm progress:
[%]: ....1050........20.90..80...60100..........................60.....80......10.20....60...50.....examining piece 9775150..9815353 (40204 bp)
..90viterbi algorithm progress:
[%]: .......30.....
.......80........70..........10......30...............20.............90.100...20...Warning: Block unknown_F is not significant enough, removed from profile.
.....40............................40..30
...70..Warning: Block unknown_A is not significant enough, removed from profile.
...............90....30.........70...40.......50.......examining piece 34494393..34550480 (56088 bp)
.....100...........100....viterbi algorithm progress:
[%]: ...
.50.50examining piece 62857466..62905010 (47545 bp)
..viterbi algorithm progress:
[%]: .....20.100....
.................
.......40..............6010....Warning: Block unknown_F is not significant enough, removed from profile.
60....................................40...6010...70.examining piece 21863141..21905387 (42247 bp)
viterbi algorithm progress:
[%]: .....examining piece 4438..29716 (25279 bp)
.viterbi algorithm progress:
[%]: ...............30.20.........................10......70........108060...........100..70...........20..........30...30..
............80.......examining piece 24702361..24743122 (40762 bp)
.302090examining piece 14896688..14950177 (53490 bp)
..70.viterbi algorithm progress:
[%]: ......20..80............viterbi algorithm progress:
[%]: .................40....................9090.........40......80...30....40.100....50...............10
..................................1005060...examining piece 29912311..29953372 (41062 bp)
..viterbi algorithm progress:
[%]: ......
....10.....40...80.....................70.....90.....10....60...9050....30....90...................80.....................20.70...........50...............Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
....examining piece 19593733..19641374 (47642 bp)
.50..90viterbi algorithm progress:
[%]: .................50........Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
..2080......30.60..90......................100.......
examining piece 10876687..10917496 (40810 bp)
.10.60100.............90.90..
viterbi algorithm progress:
[%]: ......40examining piece 44503129..44570556 (67428 bp)
..viterbi algorithm progress:
[%]: ...10090................40...........................80......20.70...50.70.100....100.......
1070..
......30................examining piece 198735..238917 (40183 bp)
.....viterbi algorithm progress:
[%]: .............Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.

Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
...........1060......30.....100.....90.60............20...2040.................80.............80.Warning: Block unknown_K is not significant enough, removed from profile.
...30examining piece 40560762..40605593 (44832 bp)
...viterbi algorithm progress:
[%]: ..................
..........Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
......4020............50examining piece 12012151..12080276 (68126 bp)
.....viterbi algorithm progress:
[%]: ....40...70100..30..50.50.40..............9010..............examining piece 15317662..15357862 (40201 bp)
.viterbi algorithm progress:
[%]: .....examining piece 41632133..41680733 (48601 bp)
.
.60............viterbi algorithm progress:
[%]: ..................60.......10.................7090.............................10................50.....8020.2080....40.....80....100...90................
70....70.............80.90..10.30..20..........................................50.10...100.....100..90....40
..
.......80.30.........30...10...examining piece 27607312..27650146 (42835 bp)
...viterbi algorithm progress:
[%]: ..............Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
......50....50....60............10.........60.................100.....100..80...examining piece 53964622..54022461 (57840 bp)
..Warning: Block unknown_H is not significant enough, removed from profile.
40Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
.viterbi algorithm progress:
[%]: ...
....60..20
examining piece 43140759..43186648 (45890 bp)
.viterbi algorithm progress:
[%]: .90.............................20...60...40........examining piece 2668151..2731973 (63823 bp)
........viterbi algorithm progress:
[%]: ......10.10Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
......70.30...............60.....................50..20........................examining piece 13783557..13823679 (40123 bp)
60..........10040..70..80..20....viterbi algorithm progress:
[%]: ....30.....100.......examining piece 37579622..37627840 (48219 bp)
...viterbi algorithm progress:
[%]: ......examining piece 14340583..14383120 (42538 bp)
..
..............................10...70.....viterbi algorithm progress:
[%]: ......10.............50.......
.9040..................30.....509030.1020.......20.60...1090............................................30.....30...............70..50....100.60.....10020
......30Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
......708040.......80..............................................30.examining piece 12826153..12887707 (61555 bp)
.70...viterbi algorithm progress:
[%]: ...........40.5060...................70.....70.................
.........6040.2040....Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_X is not significant enough, removed from profile.
Warning: Block unknown_AB is not significant enough, removed from profile.
.Warning: Block unknown_AG is not significant enough, removed from profile.
.....50...............90...60.10................20...Warning: Block unknown_A is not significant enough, removed from profile.
.....examining piece 12861829..12913442 (51614 bp)
....viterbi algorithm progress:
[%]: ...........100......508080......70.70
.................90...60.................100Warning: Block unknown_E is not significant enough, removed from profile.
.10..examining piece 52254255..52295196 (40942 bp)
....viterbi algorithm progress:
[%]: ...................50.....40.........80.....80...10...80examining piece 3305490..3355116 (49627 bp)
....20.90..viterbi algorithm progress:
[%]: ..........................................9020..20..................100...70...90..90.......................30..100.30..........

.100......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
...
.
40......100...60............
...30...40....60..50.30....100.......
......examining piece 2132452..2172547 (40096 bp)
.viterbi algorithm progress:
[%]: ................50...examining piece 13000455..13043458 (43004 bp)
.viterbi algorithm progress:
[%]: .................60..10907010.....examining piece 16296859..16365964 (69106 bp)
.....viterbi algorithm progress:
[%]: ...............30...20..100..90...............................30.....
...10..80.......70..6040..examining piece 61151994..61192224 (40231 bp)
.....40.......20....viterbi algorithm progress:
[%]: ...................................50..Warning: Block unknown_K is not significant enough, removed from profile.
........2010.........40.......50..7080..5060.................Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_B is not significant enough, removed from profile.
.......examining piece 1..20833 (20833 bp)
..viterbi algorithm progress:
[%]: ..60...10........examining piece 23794438..23843536 (49099 bp)
..examining piece 20242282..20285674 (43393 bp)
30..30..70.........10viterbi algorithm progress:
[%]: .....70.................viterbi algorithm progress:
[%]: ......20...40..20.........................examining piece 31901952..31960330 (58379 bp)
........100..8090....30........60......viterbi algorithm progress:
[%]: ..........40...304010........................40............40...........90.........................80....4050.10..80..............90......100......50...
100100..20...7010060...
.....50......................10............7050............examining piece 1..10918 (10918 bp)
..viterbi algorithm progress:
[%]: .50.........20.........10................20..20.......80.......30...................40............6090...........50...............90.....60.........80.30.....70....
.......60.........80....................10090........
.....30..100.
..................
........
70.........70...................908030.....90.......100........
..50..40.20..Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
8060...80......80.50....100...examining piece 34480391..34520570 (40180 bp)
....viterbi algorithm progress:
[%]: ....40.Warning: Block unknown_G is not significant enough, removed from profile.

.....60....80examining piece 41957806..42003003 (45198 bp)
..viterbi algorithm progress:
[%]: ..........examining piece 69433998..69481093 (47096 bp)
.........viterbi algorithm progress:
[%]: ........examining piece 25927678..25971195 (43518 bp)
.60......90.90examining piece 52370479..52418267 (47789 bp)
...viterbi algorithm progress:
[%]: .....100......10.....viterbi algorithm progress:
[%]: ......
............20..10......10.....20..40..70....50............Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_AA is not significant enough, removed from profile.
Warning: Block unknown_AD is not significant enough, removed from profile.
.Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
......100.......30.....
...20100...50..20.
.....100.................
40.....examining piece 35027750..35067905 (40156 bp)
examining piece 55348499..55388660 (40162 bp)
....viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: .....50..............30........30.....Warning: Block unknown_D is not significant enough, removed from profile.
..............10....Warning: Block unknown_F is not significant enough, removed from profile.
.60.........examining piece 1..13506 (13506 bp)
.viterbi algorithm progress:
[%]: ........10.......examining piece 13649921..13690917 (40997 bp)
......viterbi algorithm progress:
[%]: ........6040.10......20.40...............7020........................10..........8030.............................30.....80..40.20............60.........50................5020.50......................examining piece 20204065..20252920 (48856 bp)
..9040viterbi algorithm progress:
[%]: .30............Warning: Block unknown_F is not significant enough, removed from profile.
.....60........examining piece 19402214..19446050 (43837 bp)
....viterbi algorithm progress:
[%]: ........................60........40.70..50........10070...........
........50.80..................10.90....examining piece 25930854..25971060 (40207 bp)
.70..90.....5060............10......100viterbi algorithm progress:
[%]: ...90.
70..........30.70......................60.........60.......90....20..............30.....70..2080..................100.................70..Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
..70...................80...........examining piece 33837902..33877994 (40093 bp)
......viterbi algorithm progress:
[%]: ....30....40..808030....90.......10......100................................examining piece 75349192..75403351 (54160 bp)
.....2080......
.90.............70.........100....30..viterbi algorithm progress:
[%]: .100.......
.......
....4060.40....40.........70..60...90...100........
.5090........90....
........................70..60.....50.............................50.....Warning: Block unknown_L is not significant enough, removed from profile.
70...100....80.100
..50.........
........Warning: Block unknown_C is not significant enough, removed from profile.
....examining piece 43108132..43155953 (47822 bp)
...viterbi algorithm progress:
[%]: .80...90....Warning: Block unknown_K is not significant enough, removed from profile.
....Warning: Block unknown_F is not significant enough, removed from profile.
.......30..............Warning: Block unknown_M is not significant enough, removed from profile.
.......90.10010..80.10.......examining piece 11626208..11682923 (56716 bp)

viterbi algorithm progress:
[%]: .examining piece 53836534..53888589 (52056 bp)
.Warning: Block unknown_I is not significant enough, removed from profile.
.examining piece 44238190..44278297 (40108 bp)
..60100viterbi algorithm progress:
[%]: ....1010..viterbi algorithm progress:
[%]: .
...............examining piece 12347064..12390702 (43639 bp)
.....60.60examining piece 17483369..17523521 (40153 bp)
..20.viterbi algorithm progress:
[%]: ...................Warning: Block unknown_A is not significant enough, removed from profile.
......examining piece 1..10051 (10051 bp)
viterbi algorithm progress:
[%]: ..10...Warning: Block unknown_A is not significant enough, removed from profile.
.viterbi algorithm progress:
[%]: ........1010.....10.examining piece 1..14560 (14560 bp)
.viterbi algorithm progress:
[%]: .........20.......................10...30.............................40......20..40................50.......10...30.....30....60......20.........70.............70.....40examining piece 74257..130164 (55908 bp)
........100..viterbi algorithm progress:
[%]: ...............80.....50.80...............20............90...100..............60........100..50..20.
30...........70....40.20....................80....70....
..............10.....90....60......................40..30100.
..60...70.....30...........................80.80..............50.7050.......30...40............20....
.............................4010......80....examining piece 56454573..56495736 (41164 bp)
..viterbi algorithm progress:
[%]: .60.......examining piece 59495574..59537161 (41588 bp)
...viterbi algorithm progress:
[%]: ...80.50..............8010...............10...90..................................20..........90.30...2060......40.....examining piece 71939758..71982640 (42883 bp)
.9070..viterbi algorithm progress:
[%]: ...40...........20.30............examining piece 30368531..30409639 (41109 bp)
.....50viterbi algorithm progress:
[%]: .10....30....................70.................90..........20......40...80...........40...10..........30...................30....................20...50.....20..50...........50........40.............100........40......40.........30
..........70.50.60..60............90...........100............40................6060.
...50.....50.70...60......70..........50.................80.............70..................80.........60........6080.............80...........................80.........70.......90.20...90...50.........90..70.................70....examining piece 57047805..57104508 (56704 bp)
....viterbi algorithm progress:
[%]: ...80..100...
..........9010070......
........................9090................examining piece 17449650..17495440 (45791 bp)
.20100viterbi algorithm progress:
[%]: .80..60..100..
..8010.............
..90..100...
90..Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
...100.......Warning: Block unknown_D is not significant enough, removed from profile.
......examining piece 1..24861 (24861 bp)
viterbi algorithm progress:
[%]: ..........100.....Warning: Block unknown_D is not significant enough, removed from profile.
...90..examining piece 1..13265 (13265 bp)
1010viterbi algorithm progress:
[%]: ..........
...examining piece 12899128..12946071 (46944 bp)
......viterbi algorithm progress:
[%]: ...10.....20.........20..60..20...80.......examining piece 2584860..2629765 (44906 bp)
.viterbi algorithm progress:
[%]: ..............30........................
........30401010........................20...............50............100.20.60.............10.....4060
Warning: Block unknown_H is not significant enough, removed from profile.
......100..................
....30.70.30..........20examining piece 207530..250518 (42989 bp)
...viterbi algorithm progress:
[%]: .............8030...............70.50......3090.....40...............100........100.....
............10..60.30.20............50..........
..70..40.....................70.examining piece 1..10810 (10810 bp)
viterbi algorithm progress:
[%]: .70.40..40.............10......70........60..20.................20.........30.................40.....Warning: Block unknown_N is not significant enough, removed from profile.
....80...30.50......50....................examining piece 19187583..19228278 (40696 bp)
..90...60....viterbi algorithm progress:
[%]: ....70..examining piece 43873287..43915977 (42691 bp)
...Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
...viterbi algorithm progress:
[%]: .........70..80.......50..............80...30.....60.....90..................90.......30.............10...90......10010....examining piece 36897945..36938058 (40114 bp)

50.viterbi algorithm progress:
[%]: .....examining piece 1..10000 (10000 bp)
viterbi algorithm progress:
[%]: ...80...examining piece 33011496..33051621 (40126 bp)
....viterbi algorithm progress:
[%]: .........................10......80..examining piece 1..10000 (10000 bp)
..viterbi algorithm progress:
[%]: .......70..................20..........40..10.........10...100...............30.....20........20.10..
..................30...........40..............40....20...........80........20.......5050......90...................40.........40....6060...................8080.......30....70....60...70...................8050.............80......20........100.......90...40.....40.30..90....
..................90.....100....
...100.....
.....100.......100.
....30.Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_H is not significant enough, removed from profile.
50..90..90..examining piece 1..17146 (17146 bp)
.viterbi algorithm progress:
[%]: ................60.................10........40.....30......60..............20.................60..
.examining piece 1..10276 (10276 bp)
..viterbi algorithm progress:
[%]: .....50.......70..30.....10................20.examining piece 13924456..13971856 (47401 bp)
....40..viterbi algorithm progress:
[%]: ......70....30..................10090..40.40..Warning: Block unknown_C is not significant enough, removed from profile.
.................50.................60.........50.
.........70.......70..50.....80..............40......90.......100.....50..........10010..
.....60..............examining piece 1..10276 (10276 bp)
viterbi algorithm progress:
[%]: .......examining piece 26257342..26297785 (40444 bp)
....viterbi algorithm progress:
[%]: ..
....80100....10....50...............20..examining piece 24869303..24912430 (43128 bp)
...80.viterbi algorithm progress:
[%]: .......70...30...................40.....50.................50...........60......1060...........80..10......2070....60..
90....................80..80..................90..50........90..........90.100...
....20...........90..............20.100......
..90..70...................30......30..30..70....60......100...............
.................4030.......100......4070....Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
...
examining piece 49908410..49963488 (55079 bp)
....viterbi algorithm progress:
[%]: .......5060Warning: Block unknown_K is not significant enough, removed from profile.
...40..................10090Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.........50..Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
.60..80.60.........60..examining piece 39061575..39105366 (43792 bp)
..viterbi algorithm progress:
[%]: ......10..........100.....examining piece 17857820..17899162 (41343 bp)
...viterbi algorithm progress:
[%]: ..examining piece 53298326..53341896 (43571 bp)
.70.viterbi algorithm progress:
[%]: ..examining piece 26471398..26511568 (40171 bp)
.....viterbi algorithm progress:
[%]: .............70...examining piece 38983966..39029582 (45617 bp)
...10...................Warning: Block unknown_A is not significant enough, removed from profile.
....60viterbi algorithm progress:
[%]: ...5080..10.............10.....................10..........
20Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
...8080..2080.............20..........90..............examining piece 18252242..18293827 (41586 bp)
..70.viterbi algorithm progress:
[%]: ..........7020....70.............30..90...................20...10..examining piece 54179758..54229089 (49332 bp)
..60viterbi algorithm progress:
[%]: ....................80.30..
.....30100..............100
...40.30.20.......
........80..................................3030.......100.......100...40............40......
.....................40.70..40.50....
70....1090............90.......90....40.....50...............6050.......50.90.......70....examining piece 11662068..11703395 (41328 bp)
....viterbi algorithm progress:
[%]: ..........................80.........90...50..Warning: Block unknown_A is not significant enough, removed from profile.
10Warning: Block unknown_I is not significant enough, removed from profile.
100.70Warning: Block unknown_Z is not significant enough, removed from profile.
...60...examining piece 45731613..45775982 (44370 bp)
50.
..viterbi algorithm progress:
[%]: .................80examining piece 58147289..58194017 (46729 bp)
....viterbi algorithm progress:
[%]: ......60..Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
..Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
.Warning: Block unknown_AH is not significant enough, removed from profile.
Warning: Block unknown_AK is not significant enough, removed from profile.
.........examining piece 1...14848 (14848 bp)
.viterbi algorithm progress:
[%]: .10......20.............examining piece 42228536..42288710 (60175 bp)
......60.8070.......viterbi algorithm progress:
[%]: .............10..20...................20......................3060......100...............90...10
.70......100.20.............80..30.........
....70.....Warning: Block unknown_A is not significant enough, removed from profile.
.........................40..............100..30...20............
.......9040.............examining piece 41077872..41118006 (40135 bp)
90....60.....examining piece 39297253..39340810 (43558 bp)
.10..50.......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_A is not significant enough, removed from profile.
..viterbi algorithm progress:
[%]: .8080....40..examining piece 1..19313 (19313 bp)
.examining piece 1..19313 (19313 bp)
viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: ....70......50.............................10......10080....30..........10.10......20...............30............
20.....30.............................3010.....40........................20..Warning: Block unknown_A is not significant enough, removed from profile.
.40.50..........6060....100......50..............
50..60...................................10060...70................20..30.......70.80.90............
..........4090......examining piece 43228951..43269139 (40189 bp)
.80.90.....viterbi algorithm progress:
[%]: ......80..70............70.....90.........100.....
......40.............10030...
...4090.......70....10.........60........................20.......20..............Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
....50...80.40......50..............40......30.............Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
............examining piece 29287767..29328870 (41104 bp)
.70.......50.90...40.80....10060....viterbi algorithm progress:
[%]: .90...80........Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
....................50
examining piece 3296395..3337920 (41526 bp)
..viterbi algorithm progress:
[%]: ..90....Warning: Block unknown_K is not significant enough, removed from profile.
.........50..Warning: Block unknown_C is not significant enough, removed from profile.
...Warning: Block unknown_F is not significant enough, removed from profile.
...................70.60...60.....80..........100.....100.......10examining piece 20710588..20757563 (46976 bp)
.100..
.viterbi algorithm progress:
[%]: .....90..70.....
........................80..
.examining piece 58938047..58980755 (42709 bp)
.examining piece 45982078..46023865 (41788 bp)
.....viterbi algorithm progress:
[%]: ....80...10.......................................viterbi algorithm progress:
[%]: ...90.70Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
.20....90...examining piece 1..14000 (14000 bp)
viterbi algorithm progress:
[%]: ......90..60...10..........50........10100...........20..........10...
20.....100.....................30...........................40........
30................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
50.......100.20.30........
...60..100.70....80..60...............100.10..70......
.......Warning: Block unknown_A is not significant enough, removed from profile.
..40...examining piece 36910828..36953438 (42611 bp)

80viterbi algorithm progress:
[%]: ........40........examining piece 30722149..30769142 (46994 bp)
90...............100viterbi algorithm progress:
[%]: ..............100....100..30..
.examining piece 28427930..28476569 (48640 bp)
..viterbi algorithm progress:
[%]: ..90....8010....30..
10..................20...............80....10..50.50.20.20....60.......examining piece 44927780..44967980 (40201 bp)
.....viterbi algorithm progress:
[%]: .....Warning: Block unknown_E is not significant enough, removed from profile.
................90....10...10...examining piece 15184698..15225916 (41219 bp)
.viterbi algorithm progress:
[%]: ..40examining piece 4807611..4847736 (40126 bp)
.20.......100..viterbi algorithm progress:
[%]: .....30............20.....................
.....10.10......................examining piece 11301671..11351567 (49897 bp)
.30...viterbi algorithm progress:
[%]: ....30......examining piece 37547496..37587636 (40141 bp)
.60.20.viterbi algorithm progress:
[%]: .....40..60.....................40..........20.examining piece 10378891..10419016 (40126 bp)
..viterbi algorithm progress:
[%]: .
....10...................100.........50.........
..40..........90....100....50......10........2060...............30......70......30............10..................7040.........20.....4050.70.........30.........................80.50....60..20...Warning: Block unknown_J is not significant enough, removed from profile.
..
...........70........50........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
....30...90..................30.40........60...80................1006030.....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
..
..........20....examining piece 58796547..58841358 (44812 bp)
..examining piece 54180976..54226883 (45908 bp)
.....100examining piece 34779066..34832249 (53184 bp)
....viterbi algorithm progress:
[%]: ...70..80.40...viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: .................
.70...........50.......40......70.........60examining piece 44133821..44175307 (41487 bp)
..viterbi algorithm progress:
[%]: .........................10..90..............80..........50.10............10.80.30.............50.......100.......
60Warning: Block unknown_C is not significant enough, removed from profile.
...........40.90..................80........90..20......20............4050..................60.....60.Warning: Block unknown_B is not significant enough, removed from profile.
..Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
..20........examining piece 33401612..33441779 (40168 bp)
...viterbi algorithm progress:
[%]: .......................100...100..90..70...
80...........
..Warning: Block unknown_C is not significant enough, removed from profile.
..3020examining piece 32813728..32862485 (48758 bp)
..30.7010...7050.....viterbi algorithm progress:
[%]: ............90........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
..70........examining piece 1..32955 (32955 bp)
70..viterbi algorithm progress:
[%]: ...........examining piece 16040987..16084230 (43244 bp)
....100..viterbi algorithm progress:
[%]: ...........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
20...
..........examining piece 1..11990 (11990 bp)
viterbi algorithm progress:
[%]: .............30...............10.............10...............20...........4050..............30...40...........80....80100..........40.......30..100....
.......60....30...
50.....20.80..........40.............60.........60.......10...............70..........70.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
..............40.......80.......................90......5030.90...50.............9010.80........20......100.....30.
......40...examining piece 43093777..43133992 (40216 bp)
..........50...90..............50....Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
...90.viterbi algorithm progress:
[%]: ...............8060.......40........100...40........80..30..........
......10...Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.....100........60...
.60...40...70......examining piece 23892336..23969317 (76982 bp)
....examining piece 31126156..31166485 (40330 bp)
.50100viterbi algorithm progress:
[%]: .....examining piece 1..16585 (16585 bp)
viterbi algorithm progress:
[%]: .......100...
...........viterbi algorithm progress:
[%]: .....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
...10...........60.
.........2020.10.......40....60.........examining piece 41903429..41944820 (41392 bp)
....viterbi algorithm progress:
[%]: ..30......50...................80.......40..............9020......60.............50.....90................examining piece 15595808..15658162 (62355 bp)
.......60......10..Warning: Block unknown_D is not significant enough, removed from profile.
.70Warning: Block .unknown_O is not significant enough, removed from profile.
........30.....70.........30....1050......viterbi algorithm progress:
[%]: .......80.....50.......60...........90.......90...........90.70.........70.examining piece 33388050..33433706 (45657 bp)
.70..viterbi algorithm progress:
[%]: 100..40...
.........................10.......40.......20..................50............5010examining piece 9271514..9311681 (40168 bp)
80......viterbi algorithm progress:
[%]: ........60................70........................100..80..10.examining piece 30056641..30096955 (40315 bp)
..
.....206050..............viterbi algorithm progress:
[%]: ..30...............80.......20..Warning: Block unknown_J is not significant enough, removed from profile.
20.................90...............examining piece 1..11055 (11055 bp)
viterbi algorithm progress:
[%]: .....70.60....................30..80...............10..7030......90.100...........20.....examining piece 40072249..40126912 (54664 bp)
..........
....30....30.......20....40......40....40...70.....viterbi algorithm progress:
[%]: .80...........10050.........................60..
.................90....70.........80............50..80..................90.....90...........40100...90..50..100..80.
....
......examining piece 1..11055 (11055 bp)
.viterbi algorithm progress:
[%]: ...70examining piece 1..11055 (11055 bp)
viterbi algorithm progress:
[%]: .......60................................10..10..................70.....20.20...............100....100....30...30....................40.
..40...60................50...50........70...100......5060.....60..10..
........100........70...60.1070..
...90..............80....80............
...........examining piece 2836457..2878459 (42003 bp)
.90.....90...............80..........30...100....viterbi algorithm progress:
[%]: ...
100......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.

........examining piece 1..24275 (24275 bp)
..viterbi algorithm progress:
[%]: ...40.............10...............20...............9070.30.50..60...80...........examining piece 18441827..18481991 (40165 bp)
40viterbi algorithm progress:
[%]: ..40.............Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.100..................50...60.......10..examining piece 5035508..5076335 (40828 bp)
..........60.........
......60.......70examining piece 3022938..3065045 (42108 bp)
.70..viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: .100........20................80..
.........examining piece 12486..39731 (27246 bp)
viterbi algorithm progress:
[%]: .............examining piece 44438277..44478495 (40219 bp)
.......10.....80..9010examining piece 59101773..59141847 (40075 bp).
............30...viterbi algorithm progress:
[%]: .....70..........80viterbi algorithm progress:
[%]: .........20..100...
...............90.......10......30.....40.70Warning: Block unknown_P is not significant enough, removed from profile.
.............examining piece 1..10771 (10771 bp)
viterbi algorithm progress:
[%]: .........20.40........20..........20..........................100.......10.
...50....50..30...30...........20.......60.......................80.Warning: Block unknown_P is not significant enough, removed from profile.
...30Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
..70.examining piece 1..10771 (10771 bp)
..viterbi algorithm progress:
[%]: .....80..10...............40....40.80...80.....90..........90.............60.1050............examining piece 3104663..3161638 (56976 bp)
90..........50......80.examining piece 32839740..32921722 (81983 bp)
20.............60..........100....
.......30........70.viterbi algorithm progress:
[%]: ...............Warning: Block unknown_P is not significant enough, removed from profile.
......40...examining piece 1..10771 (10771 bp)
60viterbi algorithm progress:
[%]: .10.viterbi algorithm progress:
[%]: ..80..70.40.....................50.............90.......10....................................30.60......20..100..........
................7010.7030............100..40...................10080...40........80...........50.........90.
...........50.90....80......90.........100......60..
.....80.60........................Warning: Block unknown_B is not significant enough, removed from profile.
...7070............90........90...80.........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.

Warning: Block unknown_W is not significant enough, removed from profile.
Warning: Block unknown_X is not significant enough, removed from profile.
Warning: Block unknown_AA is not significant enough, removed from profile.
........examining piece 1..12284 (12284 bp)
viterbi algorithm progress:
[%]: .80.................90.examining piece 56522383..56562466 (40084 bp)
....viterbi algorithm progress:
[%]: ..........10..............Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
...1090.....20..examining piece 1..14909 (14909 bp)
.100.viterbi algorithm progress:
[%]: ..Warning: Block unknown_C is not significant enough, removed from profile.
10020................10.
..........10.............100100Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
100.30.50......

examining piece 1..30230 (30230 bp)
...
20viterbi algorithm progress:
[%]: ....
..........................examining piece 57073917..57114015 (40099 bp)
.20viterbi algorithm progress:
[%]: ...406030...........................10...................10....70....40..50................70....30...........100..20.80......20..........20..50...50.......60...........90.....3090....examining piece 1..12714 (12714 bp)
viterbi algorithm progress:
[%]: ...............60.......
...examining piece 29955050..29995913 (40864 bp)
..............10....40....viterbi algorithm progress:
[%]: .......10070....2040...
.....................3070.30....................4030.....examining piece 1..12714 (12714 bp)
..examining piece 2098906..2148325 (49420 bp)
...examining piece 1..12714 (12714 bp)
viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: ......10examining piece 41986899..42035493 (48595 bp)
.....viterbi algorithm progress:
[%]: .....50.50..............................50.........60..10..80.....10.....................................202070....80..........90...................20......30..1030......80.....10..............................40..90.40.60..................90............90.30........5050....100.....
....20..30...................6060.........60............20............702070....90.................................80...80............100............70........
.9040..90................................40.100.
..100.100..30100
.....
30..
............30...................50.........40...80.......70Warning: Block unknown_C is not significant enough, removed from profile.
...40.....Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
....50.......10.40......20....90.....40...Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
examining piece 24716868..24831507 (114640 bp)
........60...90.50.50............40.......examining piece 234671..274991 (40321 bp)
........90.60...80examining piece 71260160..71300252 (40093 bp)
...viterbi algorithm progress:
[%]: examining piece 26529543..26572686 (43144 bp)
..viterbi algorithm progress:
[%]: ...............viterbi algorithm progress:
[%]: .50......viterbi algorithm progress:
[%]: ..examining piece 29753227..29795878 (42652 bp)
.....70............60.....10viterbi algorithm progress:
[%]: ......70.....100.....60...............80....
............10.............examining piece 16856467..16900495 (44029 bp)
.20..viterbi algorithm progress:
[%]: ...10.....90....90.50...........20..............................60.10..........30......70....80.........100...........
...3020..........40.......20......20...70..........100....30.............50....100............40.........
.....40Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
...80.................70
.....20...60.80..50....30......50.60......examining piece 258129..298422 (40294 bp)
..viterbi algorithm progress:
[%]: ..................60....................examining piece 27925044..27965205 (40162 bp)
.90.viterbi algorithm progress:
[%]: .....10............................70.......4010......80......100..60.20.......80..........10.....60......20...........80....................30..100.........30.......
..........100...........
.401090.40..50.70.....
.....................examining piece 48709646..48756831 (47186 bp)
..30viterbi algorithm progress:
[%]: ....7050..................5090100..Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.Warning: Block unknown_J is not significant enough, removed from profile.
......
......examining piece 1..14118 (14118 bp)
viterbi algorithm progress:
[%]: .....10.......Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
........60...90..............10.....80..................60......70.Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
....20...examining piece 37222740..37270901 (48162 bp)
.....20.70.......viterbi algorithm progress:
[%]: ..............6030........................................40..........80..Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.....examining piece 56185414..56227336 (41923 bp)
..viterbi algorithm progress:
[%]: ...30..80....100.70...90...5010..............
............10.......90..........60...examining piece 2528429..2596580 (68152 bp)
........90..10010.30...40viterbi algorithm progress:
[%]: ........70......70......8070...40.....
.........100..........
...examining piece 87403818..87444657 (40840 bp)
......80.80.90....viterbi algorithm progress:
[%]: ...20..20....................50............90.........20...1090.100....................10.
.100.....
...................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
...........6020.....3010010030....
.
.......30Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
....examining piece 60226339..60266443 (40105 bp)
..viterbi algorithm progress:
[%]: ........................10examining piece 13566066..13616427 (50362 bp)
...viterbi algorithm progress:
[%]: ........70.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
..9040.......20............2050........examining piece 86877662..86918744 (41083 bp)
..viterbi algorithm progress:
[%]: ...........3010...40Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
...................examining piece 40790651..40830749 (40099 bp)
...Warning: Block unknown_B is not significant enough, removed from profile.
viterbi algorithm progress:
[%]: ..........2040...........10.....................10.10020examining piece 3314217..3354327 (40111 bp)
...viterbi algorithm progress:
[%]: ....80....
.50.......50examining piece 4528346..4581938 (53593 bp)
....viterbi algorithm progress:
[%]: .........examining piece 36632359..36672700 (40342 bp)
....viterbi algorithm progress:
[%]: ..................3010....................2020...30....10...80...60.......80........................20.......50.........90......30.......Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.207040...................................30....30...30.....examining piece 8233483..8280975 (47493 bp)
..viterbi algorithm progress:
[%]: ....4080.....30...........10.......................60...50...............4060...................10............4090.......50...50....40.40..20.100............................50....................
....90.50....60.............20...........60.......100......50..60.
..100.....
30....40...........90...50...60....60...................70.Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
..examining piece 1..10644 (10644 bp)
viterbi algorithm progress:
[%]: .60..........30.........40......70...10........70.................20......40..............70........examining piece 25175813..25222130 (46318 bp)
..30.viterbi algorithm progress:
[%]: .......................50......40..........100.70.......7030........10.50...80.40...............60...........6080..........80............60....20examining piece 20432589..20491604 (59016 bp)
..70.....5070.60..............................................80...80viterbi algorithm progress:
[%]: ........50........30..80......90........90............90......70....
.....90.....................50.....40.......100.........
60......................Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
......Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
...examining piece 1..17506 (17506 bp)
100viterbi algorithm progress:
[%]: .80...examining piece 1..19204 (19204 bp)
..viterbi algorithm progress:
[%]: ..70.90.....60...50100.......10.............100..
.......10.....70.......
70...10020...
................
.20.....90..........60...........30....................30.90...............80..1040.......100..70...30...........
..40.....Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
...........60...50.............70.80..50........examining piece 9044293..9085669 (41377 bp)
.......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
80.....60..100...20...90.examining piece 1..19661 (19661 bp)
....viterbi algorithm progress:
[%]: .....viterbi algorithm progress:
[%]: .....80.Warning: Block unknown_M is not significant enough, removed from profile.

.........60..10..................70..20.....80............examining piece 2653541..2697257 (43717 bp)
...viterbi algorithm progress:
[%]: ..30.....Warning: Block unknown_C is not significant enough, removed from profile.
..100...90.....................40
.......examining piece 7129501..7195775 (66275 bp)
........40.....80..50.viterbi algorithm progress:
[%]: .....70.......100.........10.........60..20.
..............90..........80......7090...80......90..................examining piece 36383076..36425691 (42616 bp)
..viterbi algorithm progress:
[%]: ....807050...80.......20......10...........100.......90...........100...100.....10......90......

100..
...90........................examining piece 9237581..9303733 (66153 bp)
....viterbi algorithm progress:
[%]: ....3020..100...........60...Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.20..
....................100....30.
..30.............90.Warning: Block unknown_F is not significant enough, removed from profile.
examining piece 25263961..25304032 (40072 bp)
..viterbi algorithm progress:
[%]: ..........40.........90........10..40Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.......Warning: Block unknown_E is not significant enough, removed from profile.
.Warning: Block unknown_G is not significant enough, removed from profile.
.Warning: Block unknown_I is not significant enough, removed from profile.
...30...70....10...........examining piece 25235552..25277425 (41874 bp)
.viterbi algorithm progress:
[%]: ...........20.examining piece 46581654..46621827 (40174 bp)
viterbi algorithm progress:
[%]: ...examining piece 34474101..34514211 (40111 bp)
............20..90.....Warning: Block unknown_K is not significant enough, removed from profile.
100....50....10.viterbi algorithm progress:
[%]: ...............examining piece 68949879..68990031 (40153 bp)
.....viterbi algorithm progress:
[%]: ...10..90...50.20...30......
........examining piece 63714226..63754414 (40189 bp)
....................20..examining piece 30257107..30302910 (45804 bp)
.30...viterbi algorithm progress:
[%]: ............................2040...100..10....30..40.viterbi algorithm progress:
[%]: ......60.80.........50.....
....40.....40.80..........................60..................20..100...50........30.10....7060
...30......
....................................30.......80.......40.....70..................................9020..........40.....40...........60.....10040..Warning: Block unknown_D is not significant enough, removed from profile.
90.
.70....................examining piece 14740349..14787761 (47413 bp)
..10viterbi algorithm progress:
[%]: ......80..50................30.............10..10......70.examining piece 36619915..36661780 (41866 bp)
...viterbi algorithm progress:
[%]: .10070...............5050...40........50.......
10..60.20............................80.......Warning: Block unknown_I is not significant enough, removed from profile.
90.....20..40......10...............5030..................30..70.100.8090.................60..examining piece 42624554..42664655 (40102 bp)
.....
viterbi algorithm progress:
[%]: ..................4040.......100...........examining piece 19043930..19095913 (51984 bp)
..viterbi algorithm progress:
[%]: .......10....50..100...................
..80..
...examining piece 56668181..56751004 (82824 bp)
........5090..90....50..20...20........viterbi algorithm progress:
[%]: ..............70.....60..............10.......60.........30........60....................90.60.........10........60......examining piece 6291049..6331144 (40096 bp)
100Warning: Block unknown_E is not significant enough, removed from profile.
viterbi algorithm progress:
[%]: .4070..............40
.....60...................Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
....10...20.100..................
.....examining piece 46481337..46548683 (67347 bp)
.70.80viterbi algorithm progress:
[%]: .802050.100..............20........30.
.100.examining piece 57203088..57253108 (50021 bp)
....viterbi algorithm progress:
[%]: .........30......
.....................70......30..90...............40Warning: Block unknown_F is not significant enough, removed from profile.
...........80.....60.10.40.....................Warning: Block unknown_B is not significant enough, removed from profile.
.......10......80.....5050examining piece 11892830..11939269 (46440 bp)
......viterbi algorithm progress:
[%]: ...100.......
90.............................30..60.Warning: Block unknown_A is not significant enough, removed from profile.
........examining piece 26159646..26203655 (44010 bp)
..106070...........................90......70.viterbi algorithm progress:
[%]: .................examining piece 3711490..3751654 (40165 bp)
...viterbi algorithm progress:
[%]: .examining piece 1440229..1486198 (45970 bp)
.........20.......70.......80.viterbi algorithm progress:
[%]: ..........10...80..40..80........20.examining piece 5811533..5852709 (41177 bp)
Warning: Block unknown_C is not significant enough, removed from profile.
...viterbi algorithm progress:
[%]: ..20.....................20.100.....................10.30.
..........10......100........809040...examining piece 36766057..36854798 (88742 bp)
....20...
..........viterbi algorithm progress:
[%]: ...30........................30.90.................................100...40...20.
40.........90...............50...............90.3030.....5090..40.50....10.....60.........30....100......100.........Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
..Warning: Block unknown_O is not significant enough, removed from profile.

.
........50..10050.70.............
...........50.....60....examining piece 6459471..6501812 (42342 bp)
.viterbi algorithm progress:
[%]: .........40.....80.........20.........70...............10.......40...20.90.60..........80....Warning: Block unknown_M is not significant enough, removed from profile.
.........examining piece 48022367..48062531 (40165 bp)
viterbi algorithm progress:
[%]: ................Warning: Block unknown_D is not significant enough, removed from profile.
......40.....100.examining piece 77056678..77101925 (45248 bp)
.10viterbi algorithm progress:
[%]: ...20..
....50..........100.....90examining piece 26976762..27023637 (46876 bp)
...viterbi algorithm progress:
[%]: ......70..........
.1070..........examining piece 13628617..13668757 (40141 bp)
..20......viterbi algorithm progress:
[%]: ..............70...100..........Warning: Block unknown_A is not significant enough, removed from profile.
....100...10...10..
...30...20..........
.30................30.4020..............30....................3050....60.........206050...........60.40examining piece 39752285..39792374 (40090 bp)
..40............examining piece 6052324..6092602 (40279 bp)
.Warning: Block unknown_D is not significant enough, removed from profile.
70..viterbi algorithm progress:
[%]: ..60..................40.....viterbi algorithm progress:
[%]: ............Warning: Block unknown_B is not significant enough, removed from profile.
..10.......8050.50..........examining piece 13508941..13554057 (45117 bp)
..viterbi algorithm progress:
[%]: .............10......50.40....20..70....................examining piece 84237..149506 (65270 bp)
.......viterbi algorithm progress:
[%]: ..7020..............2030.30..60......60............10......................30...40....80...10..................................50......50..20...9050.....70.............................40...........60....20.90............................4050.50...........Warning: Block unknown_N is not significant enough, removed from profile.
.........3070.....80........80.....30..........100...........
...............60..80.100..........60......70.
.60........40......examining piece 40268519..40322089 (53571 bp)
40viterbi algorithm progress:
[%]: ...70.90....90...50................................60..........50.100............
.......50.......100..70....10........
.......60......80.examining piece 2848298..2888444 (40147 bp)
.....70.viterbi algorithm progress:
[%]: ........................9060.....70.60.....................70....100...
..............60........10.30................70...70......20Warning: Block unknown_H is not significant enough, removed from profile.
..80.examining piece 1383053..1425985 (42933 bp)
.viterbi algorithm progress:
[%]: ..40.80..70..........70.................10.........80.Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
..50........examining piece 10980955..11022579 (41625 bp)
..viterbi algorithm progress:
[%]: ..examining piece 9087440..9134973 (47534 bp)
...viterbi algorithm progress:
[%]: ......................10............90...80.20....10..1030..........80.2060................examining piece 13139682..13188143 (48462 bp)
.....viterbi algorithm progress:
[%]: ......................20.......30.......20...........................30...................40..30........10......70..............30.....60....50.........80.....30100........8040..40..
...........60.90.80..30...90........40...............80...............50................70...50.20.............50.....................80.......60.............80...............90......90..........70..100..70.6060.......80....90..
90.Warning: Block unknown_B is not significant enough, removed from profile.
90........50.30.....................40...100......40........80..70100..100.
.......examining piece 7272210..7321918 (49709 bp)

........
.70.....viterbi algorithm progress:
[%]: ...................90.......................80...90.10..40..............Warning: Block unknown_O is not significant enough, removed from profile.
....100...
..........Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
...90.examining piece 1..32762 (32762 bp)
.viterbi algorithm progress:
[%]: ...8020.......examining piece 33477641..33517877 (40237 bp)
..100viterbi algorithm progress:
[%]: ..........1009010.................
...........50............102030...................
.examining piece 56564340..56607136 (42797 bp)
...viterbi algorithm progress:
[%]: ..........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
.....30....50.........100........40
....examining piece 24858284..24903126 (44843 bp)
20.viterbi algorithm progress:
[%]: ..10......50...40........90..................90...100examining piece 87131796..87172038 (40243 bp)
.......viterbi algorithm progress:
[%]: ...10....Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
.........30.50.....50........
..20.................Warning: Block unknown_F is not significant enough, removed from profile.
...20100........examining piece 24012808..24057885 (45078 bp)
80.viterbi algorithm progress:
[%]: ...........30...100........
...60....
60........40.............examining piece 39484095..39536404 (52310 bp)
....viterbi algorithm progress:
[%]: ..6030..40.....60examining piece 9508030..9553299 (45270 bp)
....viterbi algorithm progress:
[%]: .......10..................70.........1010.................100....................50...20...50...20..40...............................80..30....
...Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
.10..70..................30......60...20.....70.40......................5040...examining piece 9646014..9690897 (44884 bp)
........Warning: Block unknown_D is not significant enough, removed from profile.
.....viterbi algorithm progress:
[%]: .4090..........50..60..........9070.............................6070.8060.10........20......examining piece 404828..444920 (40093 bp)
...viterbi algorithm progress:
[%]: .........50..examining piece 25140195..25187422 (47228 bp)
....viterbi algorithm progress:
[%]: ....................10.100.......80.........
......70......30...20..60......60.............60.20...........30....70.................10..8080...........40.............90....examining piece 18099..56911 (38813 bp)
..50......90...70.50.............viterbi algorithm progress:
[%]: 80.......30.............90................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
.70.20............60......802090..................100.10......80..100
..70..
........................40.........examining piece 6081787..6121867 (40081 bp)
.viterbi algorithm progress:
[%]: .80...90.........60....................10.....30.......90........80.....40...80..90........20........90100.......
..100.......70.
.....Warning: Block unknown_J is not significant enough, removed from profile.
..........4030............70.........examining piece 19929075..19974366 (45292 bp)
........examining piece 14539117..14588842 (49726 bp)
70..viterbi algorithm progress:
[%]: .....viterbi algorithm progress:
[%]: .......40.........90......................50.50......1090...50........100..........50...........
.....100............20.60......80..
Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
....60..................90.....examining piece 37065865..37111579 (45715 bp)
..viterbi algorithm progress:
[%]: ...8070......100............
....30...........10.............examining piece 56489742..56529963 (40222 bp)
..........80.....70......80.viterbi algorithm progress:
[%]: .........20....60..100.90.......examining piece 1..15949 (15949 bp)
40viterbi algorithm progress:
[%]: .60............10...........90.........20..................3030.................10040.................50.80......90...
........60...........30..70....40......100..
....80..10.........
.5090...............examining piece 52882066..52925526 (43461 bp)
....viterbi algorithm progress:
[%]: ..100.....
.examining piece 25513635..25558644 (45010 bp)
..100.................90viterbi algorithm progress:
[%]: ...50.10.......................100......Warning: Block unknown_A is not significant enough, removed from profile.
..20..100................Warning: Block unknown_A is not significant enough, removed from profile.

..10..
..examining piece 14119825..14161612 (41788 bp)
.603060100.viterbi algorithm progress:
[%]: ....70.60..70......
.........examining piece 22466030..22509727 (43698 bp)
.....Warning: Block unknown_A is not significant enough, removed from profile.
.viterbi algorithm progress:
[%]: ..40..examining piece 1..25803 (25803 bp)
viterbi algorithm progress:
[%]: .....100.............
.....90........
......50.......20.10.......70...........................1002010.70......40........................30......10..90..examining piece 10320745..10371786 (51042 bp)
..viterbi algorithm progress:
[%]: ........60..examining piece 18652888..18705562 (52675 bp)
..80............viterbi algorithm progress:
[%]: .10....40......100..examining piece 27850997..27891146 (40150 bp)
..viterbi algorithm progress:
[%]: ...............80.....50examining piece 18417977..18463777 (45801 bp)
20...viterbi algorithm progress:
[%]: ....
80.Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
10.80...........20..70...1020...80.......50...........10.20.........examining piece 35644702..35702542 (57841 bp)
........viterbi algorithm progress:
[%]: .............................30.......examining piece 3823636..3863914 (40279 bp)
.....viterbi algorithm progress:
[%]: ....30............70..30......60..80.....20................10.........
..........40....20.........40.......40....................90........30....60...20...70..............50..90...........50...................50......................30.......40.60....examining piece 26513030..26562113 (49084 bp)
......viterbi algorithm progress:
[%]: .............90....80....10........10....30...........10040....60....70................100....70.......90100..50
.........
10.....
.......50100..80..90....................70.
......9030........................90..40Warning: Block unknown_G is not significant enough, removed from profile.
...60............60........2030............100....80...
........100.......
......70....60..20....2080...100...70...examining piece 78513085..78553711 (40627 bp)
100..viterbi algorithm progress:
[%]: .....
...................30..80........90.50...10.80.......examining piece 43276053..43320309 (44257 bp)
..........examining piece 3200064..3257921 (57858 bp)
.....viterbi algorithm progress:
[%]: ..............80.............Warning: Block unknown_C is not significant enough, removed from profile.
90......100viterbi algorithm progress:
[%]: ...20.......Warning: Block unknown_G is not significant enough, removed from profile.
...100....Warning: Block unknown_B is not significant enough, removed from profile.
..40.30....
...................10..30.
.examining piece 58874019..58914117 (40099 bp)
.examining piece 35880640..35925386 (44747 bp)
..viterbi algorithm progress:
[%]: ..100.......viterbi algorithm progress:
[%]: ....
..90...90...30.......examining piece 51527226..51567393 (40168 bp)
..viterbi algorithm progress:
[%]: .20..examining piece 30619205..30663984 (44780 bp)
...60......10.............Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
....10..viterbi algorithm progress:
[%]: .....10.............40...............40..............2050.20.10.20...............20............examining piece 42845765..42885911 (40147 bp)
...40....100.......
30....50.20.......30..............100...viterbi algorithm progress:
[%]: ...........40........30.....30.............examining piece 16405784..16449974 (44191 bp)
.....viterbi algorithm progress:
[%]: .....Warning: Block unknown_E is not significant enough, removed from profile.
.....
...........40...........50.......40.10....60..........70100..40..............
......20...60..50..........60.50.....examining piece 19676973..19729403 (52431 bp)
......viterbi algorithm progress:
[%]: ..................50.30...........Warning: Block unknown_E is not significant enough, removed from profile.
.......50.........Warning: Block unknown_A is not significant enough, removed from profile.
....50....90..70.40.40..60............6070...............................50.............80....60......examining piece 59933817..59973933 (40117 bp)
..viterbi algorithm progress:
[%]: ......
.........examining piece 71851587..71896554 (44968 bp)
70..viterbi algorithm progress:
[%]: .60.............80..................10...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
.Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
Warning: Block unknown_Z is not significant enough, removed from profile.
Warning: Block unknown_AF is not significant enough, removed from profile.
..70........70.8030.70.70.10.............90...10.20.............80........examining piece 33131156..33218515 (87360 bp)
examining piece 1..38930 (38930 bp)
.....viterbi algorithm progress:
[%]: ................80..........30..Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
...............10..20..70...............80............viterbi algorithm progress:
[%]: ...100...40....20....
.90................90.................30...90.50.examining piece 4305318..4352729 (47412 bp)
..30.viterbi algorithm progress:
[%]: ..60............20...........................60..90........100.....40.40
.100...........6090..10.
................80..50......50........................50..60....Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
......30.examining piece 1..17564 (17564 bp)
viterbi algorithm progress:
[%]: .70100.....10....100.........10......
..20...
............20..........70.....examining piece 14129273..14175238 (45966 bp)
.......80...20..viterbi algorithm progress:
[%]: .........30........60......................80.........40........30....90...10...............50.......................90.30.........90examining piece 8787396..8870642 (83247 bp)
...4070..20.60......Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.....100.......100.............
...70....100Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
.40..
viterbi algorithm progress:
[%]: ..30.........
.......examining piece 32834478..32874594 (40117 bp)
viterbi algorithm progress:
[%]: ...100.80........................80....examining piece 3040976..3093198 (52223 bp)
.....40........10....90.
.....10....80viterbi algorithm progress:
[%]: .......30.........50..................10050......
....................Warning: Block unknown_B is not significant enough, removed from profile.
.10.....20.....90.....40.10050.....60..examining piece 7778182..7821860 (43679 bp)
.viterbi algorithm progress:
[%]: .........10......
...examining piece 10628258..10669103 (40846 bp)
.....viterbi algorithm progress:
[%]: .........60...30............6080.10.......70.........100........
.......Warning: Block unknown_L is not significant enough, removed from profile.
...........10.50...40.........20...Warning: Block unknown_B is not significant enough, removed from profile.
...20.....40..30........80...90.10................examining piece 44351023..44407792 (56770 bp)
....viterbi algorithm progress:
[%]: ........20...20...........30...............60...70..10050....
40......60examining piece 56355463..56396245 (40783 bp)
...........viterbi algorithm progress:
[%]: ...............40....20.........90......30.............examining piece 25562696..25606744 (44049 bp)
....viterbi algorithm progress:
[%]: .........examining piece 18143998..18190953 (46956 bp)
.10.......viterbi algorithm progress:
[%]: .....50.......30.examining piece 5039146..5085635 (46490 bp)
....viterbi algorithm progress:
[%]: ..50.30..6010.........70...............8040...........10..............2010.............................20..................60.............30..examining piece 44735590..44779730 (44141 bp)
.......30......viterbi algorithm progress:
[%]: ..60....................70.....20....5020..40..70.....80......4010..........70............70..........40..........90.20...................50...........50...................90...30.............2070...........80..3080...............60...60........40.60.........40.............80............100........
....90..70........50..............70.....30...100...9070............................
40..90....80......60..80...........50.......5080..............70..........90.......80................100...........
............100..90........60.Warning: Block unknown_E is not significant enough, removed from profile.
........
..60......90......90......30.50......Warning: Block unknown_E is not significant enough, removed from profile.
....100.......100..40.....100.

.100.
.
.70examining piece 50852772..50913774 (61003 bp)
........80examining piece 31057602..31098174 (40573 bp)
....viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: .........................90.70............Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
...10080..10....examining piece 58619140..58664534 (45395 bp)
...viterbi algorithm progress:
[%]: .......100..Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
..........60
.....examining piece 25215025..25255555 (40531 bp)
...viterbi algorithm progress:
[%]: .....1080...............20.....examining piece 9753323..9795928 (42606 bp)
...10....8010.viterbi algorithm progress:
[%]: .examining piece 41033344..41073493 (40150 bp)
.viterbi algorithm progress:
[%]: ...
.............90...........30.9020.....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
..10....................2050......20.........20..30...............................30..30.70..............30.......examining piece 85912724..85953946 (41223 bp)
....viterbi algorithm progress:
[%]: ..examining piece 9347291..9389738 (42448 bp)
...viterbi algorithm progress:
[%]: .......40.........70...30..........90.........10100.......50........40......100.
................10....Warning: Block unknown_A is not significant enough, removed from profile.
............20..40...60.40
..........examining piece 55811725..55867508 (55784 bp)
.viterbi algorithm progress:
[%]: ...........50.............100........70...80......30......................
......examining piece 86466343..86507804 (41462 bp)
..2040.viterbi algorithm progress:
[%]: .50...80..10.............5080.......60.1040.................4050..........1010.................................20......906090............50....................70........Warning: Block unknown_G is not significant enough, removed from profile.
.....60..examining piece 1..19553 (19553 bp)
.viterbi algorithm progress:
[%]: .Warning: Block unknown_B is not significant enough, removed from profile.
20.....30...100...........20......30.100........100
..20
......6010
........................50....Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
40....20....90............80..30..60........30......9070......examining piece 8003790..8043918 (40129 bp)
............viterbi algorithm progress:
[%]: ......40..70....examining piece 45304..85417 (40114 bp)
...50..................................40..viterbi algorithm progress:
[%]: 10......90.30..................50....5040....80.20......90............10...................examining piece 36957446..37009262 (51817 bp)
...viterbi algorithm progress:
[%]: ............20..60...............60...........................20.......30......50.....70....90....70.....60...examining piece 16262002..16302678 (40677 bp)
..80.70..100........30.viterbi algorithm progress:
[%]: ..
.10...30..60..............40....80.......40.Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_F is not significant enough, removed from profile.
.Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
.Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_X is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
Warning: Block unknown_Z is not significant enough, removed from profile.
Warning: Block unknown_AA is not significant enough, removed from profile.
Warning: Block unknown_AC is not significant enough, removed from profile.
....70......10.........................40......................4050........40...20.................90100.......................70....20
30................50.....7050..........80..examining piece 44727814..44783109 (55296 bp)
...60..viterbi algorithm progress:
[%]: ...100....50..80
........40........90....60.......................80................50........70..............30.........70....50..60........60............90.........10......examining piece 27302155..27342361 (40207 bp)
.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
.....Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
7080.90....60......viterbi algorithm progress:
[%]: ..70.............................................examining piece 14001068..14041238 (40171 bp)
....10........examining piece 21104984..21158819 (53836 bp)
...40.100...viterbi algorithm progress:
[%]: ...90........
.....viterbi algorithm progress:
[%]: ...20......100.70........
...60........60...80.......10040109080......30.............40.....
............60..........4080...100......80.
......10....20....50.......20..50........80....................90.....Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.............60..........70.30....9020..100Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
..........examining piece 42100297..42142643 (42347 bp)
......viterbi algorithm progress:
[%]: ..................Warning: Block unknown_C is not significant enough, removed from profile.
..........100
...70...70.......30......10..100.....examining piece 25608450..25655750 (47301 bp)
.viterbi algorithm progress:
[%]: ..
..40.........10070......examining piece 6564217..6606919 (42703 bp)
.viterbi algorithm progress:
[%]: ..
...30.....examining piece 26828273..26871149 (42877 bp)
..viterbi algorithm progress:
[%]: ...........60.............70.10.....103020............10...................5020.......40.......90......
....20.examining piece 1..19146 (19146 bp)
.viterbi algorithm progress:
[%]: .......................80..30.10..................30.......20......................20.30..30.40......40...................40....80............................6050....50..40.90.50.................................60..3090.4010080.....
.....................80..6070.......................5080...examining piece 112725..173325 (60601 bp)
......viterbi algorithm progress:
[%]: .........70...............90..........................70..40....100..50.
......70Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
..........6050.......60........10...8080.........................40............examining piece 40735891..40779152 (43262 bp)
....70examining piece 9278671..9319009 (40339 bp)
..viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: .....90...90................................50....10...10...........20...............80.......100.9060..20
................2080.................90.........70........7060.......90......30.......100..30........60..........80...................
..........10070....100.100.
.......80.80...40
.........40...9090..70....90......100.........50100
........
.70.
...........80..........6050.......30...90......80.....................70......100........100..
..100...
9050..........80................90............90
...........60...........100.......100..
..
10060..
........70.5040.....50..........50.............60...........70............8080.....80......90.....90.........100..
....90...70.....................100..
.100...90..50......100.
..........60.80.........
.....70.............10080
.....100........100.90...........90..100.


..............6090100.
......60..............70...........8070...............100
90............100.
..80..........8090............90...........100
.100
Will create parameters for a EUKARYOTIC species!
creating directory /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/ ...
creating /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg ...
creating /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_weightmatrix.txt ...
creating /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_metapars.cfg ...
The necessary files for training BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482 have been created.
Now, either run etraining or optimize_parameters.pl with --species=BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482.
etraining quickly estimates the parameters from a file with training genes.
optimize_augustus.pl alternates running etraining and augustus to find optimal metaparameters.

# Read in 640 genbank sequences.
Quantiles of the GC contents in the training set:
0%	0.294
5%	0.325	10%	0.328
15%	0.33	20%	0.332
25%	0.334	30%	0.335
35%	0.336	40%	0.337
45%	0.338	50%	0.34
55%	0.341	60%	0.342
65%	0.343	70%	0.344
75%	0.345	80%	0.348
85%	0.35	90%	0.352
95%	0.357	100%	0.406
HMM-training the parameters...
i= 0 bc= (0.237, 0.263, 0.263, 0.237)
 ** building model for exons *EXON*
gene g1.t1 transcr. 1 in sequence PGA_scaffold10__49_contigs__length_53961475_29538178-29548657: Terminal exon doesn't end in stop codon. Variable stopCodonExcludedFromCDS set right?
gene g1.t1 transcr. 1 in sequence PGA_scaffold6__104_contigs__length_61759565_56473105-56522095: Initial exon does not begin with start codon but with ggt
gene g3.t1 transcr. 1 in sequence PGA_scaffold14__91_contigs__length_45393038_3246320-3253849: Terminal exon doesn't end in stop codon. Variable stopCodonExcludedFromCDS set right?
gene g1.t1 transcr. 1 in sequence PGA_scaffold8__63_contigs__length_61151155_43614820-43644861: Initial exon does not begin with start codon but with gac
gene g1.t1 transcr. 1 in sequence PGA_scaffold212__1_contigs__length_26332_1-9625: Initial exon does not begin with start codon but with tta
gene g3.t1 transcr. 1 in sequence PGA_scaffold3__111_contigs__length_57743597_49797482-49826206: coding length not a multiple of 3. Skipping...
gene g2.t1 transcr. 1 in sequence PGA_scaffold59171__1_contigs__length_43122_27782-43122: Terminal exon doesn't end in stop codon. Variable stopCodonExcludedFromCDS set right?
gene g1.t1 transcr. 1 in sequence PGA_scaffold53018__1_contigs__length_28564_133-22612: Initial exon does not begin with start codon but with gaa
gene g1.t1 transcr. 1 in sequence PGA_scaffold6__104_contigs__length_61759565_16227653-16280711: Terminal exon doesn't end in stop codon. Variable stopCodonExcludedFromCDS set right?
gene g1.t1 transcr. 1 in sequence PGA_scaffold15__101_contigs__length_47938513_4546049-4566560: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold6__104_contigs__length_61759565_28812419-28821414: coding length not a multiple of 3. Skipping...
gene g2.t1 transcr. 1 in sequence PGA_scaffold8__63_contigs__length_61151155_20446070-20472602: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold13__52_contigs__length_44396874_30276104-30283855: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold2__36_contigs__length_69596280_32837088-32842122: coding length not a multiple of 3. Skipping...
gene g2.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_17493052-17505227: Initial exon does not begin with start codon but with cta
gene g1.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_87407336-87435375: Terminal exon doesn't end in stop codon. Variable stopCodonExcludedFromCDS set right?
gene g1.t1 transcr. 1 in sequence PGA_scaffold69250__1_contigs__length_10644_6968-10312: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold4__129_contigs__length_65288255_44248226-44259300: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold50467__1_contigs__length_19553_6600-19502: coding length not a multiple of 3. Skipping...
gene g3.t1 transcr. 1 in sequence PGA_scaffold58106__1_contigs__length_15949_9863-15752: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_1865439-1893032: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold66325__1_contigs__length_13533_1089-13533: Initial exon does not begin with start codon but with gga
gene g1.t1 transcr. 1 in sequence PGA_scaffold53508__1_contigs__length_19204_3763-17406: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold16__33_contigs__length_31980953_31287400-31332878: coding length not a multiple of 3. Skipping...
start codon frequencies: ATG(620), CTG(1)
# admissible start codons and their probabilities: ATG(0.998), CTG(0.00161), TTG(0)
 number of bases in the reading frames: 243686 244297 244288
--- frame = 0 ---    minPatSum = 233
--- frame = 1 ---    minPatSum = 233
--- frame = 2 ---    minPatSum = 233
--- initial frame = 0 ---    minPatSum = 233
--- initial frame = 1 ---    minPatSum = 233
--- initial frame = 2 ---    minPatSum = 233
--- internal exon terminal frame = 0 ---    minPatSum = 233
--- internal exon terminal frame = 1 ---    minPatSum = 233
--- internal exon terminal frame = 2 ---    minPatSum = 233
single, initial, internal, terminal mean exon lengths :
828	118	105	165
single exon : 10
initial exon 0 : 267
initial exon 1 : 186
initial exon 2 : 158
internal exon 0 : 2424
internal exon 1 : 1694
internal exon 2 : 1551
terminal exon : 612
Frequency of stop codons:
tag:  145 (0.233)
taa:  205 (0.33)
tga:  272 (0.437)
end *EXON*
Storing parameters to file...
Writing exon model parameters [1] to file /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_exon_probs.pbl.
WARNING: parameter --cpus has value 28 but parameter --kfold has value 8. --kfold limits the number of --cpus that can be used. Will not use only 8 CPUs. Please abort and restart with --kfold=28 to really use that number of CPUs!
Splitting training file into 8 buckets...
Reading in the meta parameters used for optimization from /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/generic/generic_metapars.cfg...
Reading in the starting meta parameters from /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 7 3 5 1 8 
starting accuracy: 0.8554, 0.6957, 0.5720, 0.6094, 0.0719, 0.0479, -1.00, -1.00, starting target: 0.5835
improving parameter /Constant/dss_end curently set to 4
1-4
/Constant/dss_end: checking values 1	2	3	4
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 5 3 1 8 
retrieve accuracy from previous computation
values  1	2	3	4
targets 0.5534	0.5597	0.5802	0.5835
improving parameter /Constant/dss_start curently set to 3
1-3
/Constant/dss_start: checking values 1	2	3
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8584, 0.6960, 0.5768, 0.6200, 0.0830, 0.0569, -1.00, -1.00, optimal target: 0.5891
changing /Constant/dss_start to 1
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	2
/Constant/ass_upwindow_size	30
/IntronModel/d	100
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8591, 0.6959, 0.5819, 0.6209, 0.0877, 0.0598, -1.00, -1.00, optimal target: 0.5911
changing /Constant/dss_start to 2
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	2
/Constant/ass_upwindow_size	30
/IntronModel/d	100
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
retrieve accuracy from previous computation
values  1	2	3
targets 0.5891	0.5911	0.5835
/Constant/dss_start: checking values 2
retrieve accuracy from previous computation
values  2
targets 0.5911
improving parameter /Constant/ass_start curently set to 3
1-3
/Constant/ass_start: checking values 1	2	3
bucket 6 4 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
values  1	2	3
targets 0.5882	0.5886	0.5911
improving parameter /Constant/ass_end curently set to 2
0-4
/Constant/ass_end: checking values 0	1	2	3	4
bucket 4 6 2 7 3 1 5 8 
bucket 4 6 2 3 7 5 1 8 
found improvement: 0.8595, 0.6940, 0.5844, 0.6216, 0.0892, 0.0612, -1.00, -1.00, optimal target: 0.5918
changing /Constant/ass_end to 1
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	100
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 6 4 2 7 3 1 5 8 
values  0	1	2	3	4
targets 0.5896	0.5918	0.5911	0.5806	0.5564
/Constant/ass_end: checking values 1	2
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2
targets 0.5918	0.5911
improving parameter /Constant/ass_upwindow_size curently set to 30
1-50
/Constant/ass_upwindow_size: checking values 1	13	25	37	50
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 1 5 8 
bucket 4 6 2 3 7 1 5 8 
bucket 6 4 2 3 7 1 5 8 
bucket 4 6 2 7 3 5 1 8 
values  1	13	25	37	50
targets 0.5621	0.5873	0.5911	0.5895	0.5908
improving parameter /IntronModel/d curently set to 100
100-950
/IntronModel/d: checking values 100	312	525	737	950
retrieve accuracy from previous computation
bucket 4 6 2 7 3 1 5 8 
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8605, 0.6951, 0.5856, 0.6242, 0.0891, 0.0611, -1.00, -1.00, optimal target: 0.5929
changing /IntronModel/d to 525
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	525
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8604, 0.6970, 0.5854, 0.6284, 0.0907, 0.0626, -1.00, -1.00, optimal target: 0.5943
changing /IntronModel/d to 737
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	737
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 3 7 5 1 8 
found improvement: 0.8599, 0.6981, 0.5846, 0.6309, 0.0923, 0.0638, -1.00, -1.00, optimal target: 0.5950
changing /IntronModel/d to 950
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
values  100	312	525	737	950
targets 0.5918	0.5912	0.5929	0.5943	0.5950
/IntronModel/d: checking values 738	791	844	897	950
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8604, 0.6976, 0.5855, 0.6305, 0.0923, 0.0638, -1.00, -1.00, optimal target: 0.5951
changing /IntronModel/d to 844
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	844
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  738	791	844	897	950
targets 0.5943	0.5948	0.5951	0.5948	0.5950
/IntronModel/d: checking values 792	818	844	870	897
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8606, 0.6979, 0.5858, 0.6304, 0.0923, 0.0638, -1.00, -1.00, optimal target: 0.5952
changing /IntronModel/d to 818
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  792	818	844	870	897
targets 0.5948	0.5952	0.5951	0.5951	0.5948
/IntronModel/d: checking values 793	805	818	831	844
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  793	805	818	831	844
targets 0.5949	0.5950	0.5952	0.5952	0.5951
improving parameter /IntronModel/ass_motif_memory curently set to 3
0-3
/IntronModel/ass_motif_memory: checking values 0	1	2	3
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5829	0.5923	0.5938	0.5952
improving parameter /IntronModel/ass_motif_radius curently set to 3
0-4
/IntronModel/ass_motif_radius: checking values 0	1	2	3	4
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8610, 0.6990, 0.5857, 0.6319, 0.0922, 0.0634, -1.00, -1.00, optimal target: 0.5956
changing /IntronModel/ass_motif_radius to 4
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
values  0	1	2	3	4
targets 0.5872	0.5933	0.5946	0.5952	0.5956
/IntronModel/ass_motif_radius: checking values 4
retrieve accuracy from previous computation
values  4
targets 0.5956
improving parameter /ExonModel/tis_motif_memory curently set to 3
0-3
/ExonModel/tis_motif_memory: checking values 0	1	2	3
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8609, 0.6974, 0.5871, 0.6318, 0.1064, 0.0723, -1.00, -1.00, optimal target: 0.5980
changing /ExonModel/tis_motif_memory to 2
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5943	0.5951	0.5980	0.5956
/ExonModel/tis_motif_memory: checking values 2
retrieve accuracy from previous computation
values  2
targets 0.5980
improving parameter /ExonModel/tis_motif_radius curently set to 2
0-3
/ExonModel/tis_motif_radius: checking values 0	1	2	3
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
values  0	1	2	3
targets 0.5952	0.5960	0.5980	0.5966
improving parameter /Constant/trans_init_window curently set to 20
0-25
/Constant/trans_init_window: checking values 0	6	12	18	25
bucket 4 6 2 7 5 3 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0	6	12	18	25
targets 0.5923	0.5949	0.5954	0.5957	0.5956
improving parameter /Constant/init_coding_len curently set to 15
0-18
/Constant/init_coding_len: checking values 0	4	9	13	18
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
found improvement: 0.8624, 0.6966, 0.5881, 0.6322, 0.1048, 0.0711, -1.00, -1.00, optimal target: 0.5981
changing /Constant/init_coding_len to 18
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
values  0	4	9	13	18
targets 0.5959	0.5954	0.5941	0.5965	0.5981
/Constant/init_coding_len: checking values 14	15	16	17	18
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  14	15	16	17	18
targets 0.5976	0.5980	0.5974	0.5979	0.5981
improving parameter /ExonModel/patpseudocount curently set to 5.0
0.5-5
/ExonModel/patpseudocount: checking values 0.5	1.625	2.75	3.875	5
bucket 4 6 2 3 7 5 1 8 
found improvement: 0.8644, 0.7020, 0.5886, 0.6338, 0.1126, 0.0773, -1.00, -1.00, optimal target: 0.6010
changing /ExonModel/patpseudocount to 0.5
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 6 4 2 7 3 5 1 8 
values  0.5	1.625	2.75	3.875	5
targets 0.6010	0.5997	0.5988	0.5983	0.5981
/ExonModel/patpseudocount: checking values 0.5	0.78125	1.0625	1.34375	1.625
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  0.5	0.78125	1.0625	1.34375	1.625
targets 0.6010	0.6004	0.6002	0.5999	0.5997
improving parameter /ExonModel/etpseudocount curently set to 3
0-10
/ExonModel/etpseudocount: checking values 0	2	5	7	10
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0	2	5	7	10
targets 0.6010	0.6010	0.6010	0.6010	0.6010
improving parameter /ExonModel/etorder curently set to 2
0-3
/ExonModel/etorder: checking values 0	1	2	3
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
values  0	1	2	3
targets 0.6010	0.6010	0.6010	0.6010
improving parameter /Constant/intterm_coding_len curently set to 5
0-13
/Constant/intterm_coding_len: checking values 0	3	6	9	13
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8636, 0.7041, 0.5893, 0.6351, 0.1095, 0.0758, -1.00, -1.00, optimal target: 0.6011
changing /Constant/intterm_coding_len to 13
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
values  0	3	6	9	13
targets 0.6010	0.6009	0.5998	0.6004	0.6011
/Constant/intterm_coding_len: checking values 10	11	12	13
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 1 5 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  10	11	12	13
targets 0.5986	0.5997	0.6001	0.6011
improving parameter /ExonModel/slope_of_bandwidth curently set to 0.3
0.05-0.6
/ExonModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.6011	0.6011	0.6011	0.6010	0.6008
improving parameter /ExonModel/minwindowcount curently set to 10
1-15
/ExonModel/minwindowcount: checking values 1	4	8	11	15
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 1 5 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  1	4	8	11	15
targets 0.5995	0.5999	0.6005	0.6009	0.6010
improving parameter /IGenicModel/patpseudocount curently set to 5.0
0.5-7
/IGenicModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 1 5 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0.5	2.125	3.75	5.375	7
targets 0.6011	0.6011	0.6011	0.6011	0.6011
improving parameter /IntronModel/patpseudocount curently set to 5.0
0.5-7
/IntronModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0.5	2.125	3.75	5.375	7
targets 0.6010	0.6010	0.6010	0.6011	0.6011
improving parameter /IntronModel/slope_of_bandwidth curently set to 0.4
0.05-0.6
/IntronModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
found improvement: 0.8636, 0.7045, 0.5889, 0.6356, 0.1095, 0.0757, -1.00, -1.00, optimal target: 0.6012
changing /IntronModel/slope_of_bandwidth to 0.1875
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.1875
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.6008	0.6012	0.6012	0.6010	0.6005
/IntronModel/slope_of_bandwidth: checking values 0.05	0.11875	0.1875	0.25625	0.325
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
found improvement: 0.8636, 0.7047, 0.5890, 0.6359, 0.1095, 0.0758, -1.00, -1.00, optimal target: 0.6013
changing /IntronModel/slope_of_bandwidth to 0.11875
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  0.05	0.11875	0.1875	0.25625	0.325
targets 0.6008	0.6013	0.6012	0.6012	0.6012
/IntronModel/slope_of_bandwidth: checking values 0.05	0.084375	0.11875	0.153125	0.1875
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  0.05	0.084375	0.11875	0.153125	0.1875
targets 0.6008	0.6013	0.6013	0.6012	0.6012
improving parameter /IntronModel/minwindowcount curently set to 4
1-8
/IntronModel/minwindowcount: checking values 1	2	4	6	8
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8635, 0.7047, 0.5891, 0.6364, 0.1095, 0.0758, -1.00, -1.00, optimal target: 0.6014
changing /IntronModel/minwindowcount to 6
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	6
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 3 7 5 1 8 
found improvement: 0.8638, 0.7047, 0.5894, 0.6364, 0.1095, 0.0758, -1.00, -1.00, optimal target: 0.6015
changing /IntronModel/minwindowcount to 8
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	8
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
values  1	2	4	6	8
targets 0.6011	0.6011	0.6013	0.6014	0.6015
/IntronModel/minwindowcount: checking values 7	8
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  7	8
targets 0.6015	0.6015
improving parameter /IntronModel/asspseudocount curently set to 0.00266
0.0005-0.03
/IntronModel/asspseudocount: checking values 0.0005	0.007875	0.01525	0.022625	0.03
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8639, 0.7047, 0.5895, 0.6365, 0.1095, 0.0758, -1.00, -1.00, optimal target: 0.6016
changing /IntronModel/asspseudocount to 0.01525
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	8
/IntronModel/asspseudocount	0.01525
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0.0005	0.007875	0.01525	0.022625	0.03
targets 0.6015	0.6015	0.6016	0.6016	0.6016
/IntronModel/asspseudocount: checking values 0.007875	0.0115625	0.01525	0.0189375	0.022625
retrieve accuracy from previous computation
bucket 4 6 2 3 7 1 5 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  0.007875	0.0115625	0.01525	0.0189375	0.022625
targets 0.6015	0.6016	0.6016	0.6016	0.6016
improving parameter /IntronModel/dsspseudocount curently set to 0.0005
0.0002-0.04
/IntronModel/dsspseudocount: checking values 0.0002	0.01015	0.0201	0.03005	0.04
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8639, 0.7045, 0.5894, 0.6364, 0.1111, 0.0767, -1.00, -1.00, optimal target: 0.6018
changing /IntronModel/dsspseudocount to 0.01015
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	8
/IntronModel/asspseudocount	0.01525
/IntronModel/dsspseudocount	0.01015
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0.0002	0.01015	0.0201	0.03005	0.04
targets 0.6016	0.6018	0.6013	0.6010	0.6013
/IntronModel/dsspseudocount: checking values 0.000200000000000001	0.005175	0.01015	0.015125	0.0201
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
values  0.000200000000000001	0.005175	0.01015	0.015125	0.0201
targets 0.6016	0.6016	0.6018	0.6014	0.6013
improving parameter /IntronModel/dssneighborfactor curently set to 0.00173
0.0001-0.01
/IntronModel/dssneighborfactor: checking values 0.0001	0.002575	0.00505	0.007525	0.01
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
found improvement: 0.8645, 0.7047, 0.5905, 0.6372, 0.1111, 0.0767, -1.00, -1.00, optimal target: 0.6023
changing /IntronModel/dssneighborfactor to 0.002575
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	8
/IntronModel/asspseudocount	0.01525
/IntronModel/dsspseudocount	0.01015
/IntronModel/dssneighborfactor	0.002575
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0.0001	0.002575	0.00505	0.007525	0.01
targets 0.5999	0.6023	0.6022	0.6022	0.6016
/IntronModel/dssneighborfactor: checking values 0.0001	0.0013375	0.002575	0.0038125	0.00505
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
found improvement: 0.8650, 0.7044, 0.5910, 0.6370, 0.1111, 0.0767, -1.00, -1.00, optimal target: 0.6024
changing /IntronModel/dssneighborfactor to 0.0038125
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	8
/IntronModel/asspseudocount	0.01525
/IntronModel/dsspseudocount	0.01015
/IntronModel/dssneighborfactor	0.0038125
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
retrieve accuracy from previous computation
values  0.0001	0.0013375	0.002575	0.0038125	0.00505
targets 0.5999	0.6011	0.6023	0.6024	0.6022
/IntronModel/dssneighborfactor: checking values 0.002575	0.00319375	0.0038125	0.00443125	0.00505
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8654, 0.7046, 0.5914, 0.6371, 0.1111, 0.0768, -1.00, -1.00, optimal target: 0.6026
changing /IntronModel/dssneighborfactor to 0.00443125
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	8
/IntronModel/asspseudocount	0.01525
/IntronModel/dsspseudocount	0.01015
/IntronModel/dssneighborfactor	0.00443125
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
retrieve accuracy from previous computation
values  0.002575	0.00319375	0.0038125	0.00443125	0.00505
targets 0.6023	0.6023	0.6024	0.6026	0.6022
/IntronModel/dssneighborfactor: checking values 0.0038125	0.004121875	0.00443125	0.004740625	0.00505
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  0.0038125	0.004121875	0.00443125	0.004740625	0.00505
targets 0.6024	0.6024	0.6026	0.6023	0.6022
improving parameter /ExonModel/minPatSum curently set to 233.3
100-600
/ExonModel/minPatSum: checking values 100	225	350	475	600
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  100	225	350	475	600
targets 0.6019	0.6024	0.6013	0.6008	0.5983
improving parameter /Constant/probNinCoding curently set to 0.23
0.15-.25
/Constant/probNinCoding: checking values 0.15	0.175	0.2	0.225	0.25
bucket 4 6 2 3 7 5 1 8 
found improvement: 0.8656, 0.7094, 0.5921, 0.6400, 0.1127, 0.0790, -1.00, -1.00, optimal target: 0.6044
changing /Constant/probNinCoding to 0.15
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	8
/IntronModel/asspseudocount	0.01525
/IntronModel/dsspseudocount	0.01015
/IntronModel/dssneighborfactor	0.00443125
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.15
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0.15	0.175	0.2	0.225	0.25
targets 0.6044	0.6043	0.6038	0.6026	0.6017
/Constant/probNinCoding: checking values 0.15	0.15625	0.1625	0.16875	0.175
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 6 4 2 3 7 1 5 8 
bucket 4 6 2 7 5 3 1 8 
retrieve accuracy from previous computation
values  0.15	0.15625	0.1625	0.16875	0.175
targets 0.6044	0.6044	0.6043	0.6043	0.6043
improving parameter /Constant/decomp_num_steps curently set to 1
1-5
/Constant/decomp_num_steps: checking values 1	2	3	4	5
retrieve accuracy from previous computation
bucket 4 6 2 3 7 1 5 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 1 5 8 
values  1	2	3	4	5
targets 0.6044	0.6016	0.6010	0.6014	0.5996
improving parameter /Constant/dss_end curently set to 4
1-4
/Constant/dss_end: checking values 1	2	3	4
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  1	2	3	4
targets 0.5642	0.5754	0.5988	0.6044
improving parameter /Constant/dss_start curently set to 2
1-3
/Constant/dss_start: checking values 1	2	3
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 1 5 8 
values  1	2	3
targets 0.5998	0.6044	0.5957
improving parameter /Constant/ass_start curently set to 3
1-3
/Constant/ass_start: checking values 1	2	3
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
values  1	2	3
targets 0.5997	0.6007	0.6044
improving parameter /Constant/ass_end curently set to 1
0-4
/Constant/ass_end: checking values 0	1	2	3	4
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0	1	2	3	4
targets 0.6007	0.6044	0.6025	0.5928	0.5814
improving parameter /Constant/ass_upwindow_size curently set to 30
1-50
/Constant/ass_upwindow_size: checking values 1	13	25	37	50
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8656, 0.7105, 0.5921, 0.6400, 0.1127, 0.0786, -1.00, -1.00, optimal target: 0.6045
changing /Constant/ass_upwindow_size to 50
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	50
/IntronModel/d	818
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	8
/IntronModel/asspseudocount	0.01525
/IntronModel/dsspseudocount	0.01015
/IntronModel/dssneighborfactor	0.00443125
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.15
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
values  1	13	25	37	50
targets 0.5709	0.5969	0.6019	0.6018	0.6045
/Constant/ass_upwindow_size: checking values 38	41	44	47	50
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 1 5 8 
retrieve accuracy from previous computation
values  38	41	44	47	50
targets 0.6034	0.6026	0.6027	0.6043	0.6045
improving parameter /IntronModel/d curently set to 818
100-950
/IntronModel/d: checking values 100	312	525	737	950
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8656, 0.7104, 0.5923, 0.6392, 0.1143, 0.0798, -1.00, -1.00, optimal target: 0.6047
changing /IntronModel/d to 950
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	50
/IntronModel/d	950
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	8
/IntronModel/asspseudocount	0.01525
/IntronModel/dsspseudocount	0.01015
/IntronModel/dssneighborfactor	0.00443125
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.15
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
values  100	312	525	737	950
targets 0.5997	0.5986	0.6034	0.6034	0.6047
/IntronModel/d: checking values 738	791	844	897	950
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  738	791	844	897	950
targets 0.6034	0.6038	0.6043	0.6047	0.6047
improving parameter /IntronModel/ass_motif_memory curently set to 3
0-3
/IntronModel/ass_motif_memory: checking values 0	1	2	3
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5896	0.5998	0.6028	0.6047
improving parameter /IntronModel/ass_motif_radius curently set to 4
0-4
/IntronModel/ass_motif_radius: checking values 0	1	2	3	4
bucket 4 6 2 7 3 5 1 8 
bucket 6 4 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  0	1	2	3	4
targets 0.5939	0.6018	0.6033	0.6033	0.6047
improving parameter /ExonModel/tis_motif_memory curently set to 2
0-3
/ExonModel/tis_motif_memory: checking values 0	1	2	3
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
values  0	1	2	3
targets 0.5996	0.6011	0.6047	0.5999
improving parameter /ExonModel/tis_motif_radius curently set to 2
0-3
/ExonModel/tis_motif_radius: checking values 0	1	2	3
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 3 7 1 5 8 
values  0	1	2	3
targets 0.6005	0.6035	0.6047	0.6025
improving parameter /Constant/trans_init_window curently set to 20
0-25
/Constant/trans_init_window: checking values 0	6	12	18	25
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 1 5 8 
values  0	6	12	18	25
targets 0.5979	0.6006	0.6014	0.6031	0.6030
improving parameter /Constant/init_coding_len curently set to 18
0-18
/Constant/init_coding_len: checking values 0	4	9	13	18
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 5 3 1 8 
retrieve accuracy from previous computation
values  0	4	9	13	18
targets 0.6009	0.5999	0.5989	0.6005	0.6047
improving parameter /ExonModel/patpseudocount curently set to 0.5
0.5-5
/ExonModel/patpseudocount: checking values 0.5	1.625	2.75	3.875	5
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0.5	1.625	2.75	3.875	5
targets 0.6047	0.6047	0.6030	0.6028	0.6025
improving parameter /ExonModel/etpseudocount curently set to 3
0-10
/ExonModel/etpseudocount: checking values 0	2	5	7	10
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0	2	5	7	10
targets 0.6047	0.6047	0.6047	0.6047	0.6047
improving parameter /ExonModel/etorder curently set to 2
0-3
/ExonModel/etorder: checking values 0	1	2	3
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 3 7 1 5 8 
values  0	1	2	3
targets 0.6047	0.6047	0.6047	0.6047
improving parameter /Constant/intterm_coding_len curently set to 13
0-13
/Constant/intterm_coding_len: checking values 0	3	6	9	13
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
values  0	3	6	9	13
targets 0.6032	0.6020	0.6039	0.6029	0.6047
improving parameter /ExonModel/slope_of_bandwidth curently set to 0.3
0.05-0.6
/ExonModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 1 5 8 
bucket 4 6 2 7 3 5 1 8 
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.6043	0.6042	0.6047	0.6044	0.6042
improving parameter /ExonModel/minwindowcount curently set to 10
1-15
/ExonModel/minwindowcount: checking values 1	4	8	11	15
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8655, 0.7111, 0.5924, 0.6398, 0.1143, 0.0800, -1.00, -1.00, optimal target: 0.6049
changing /ExonModel/minwindowcount to 8
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	50
/IntronModel/d	950
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	8
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	8
/IntronModel/asspseudocount	0.01525
/IntronModel/dsspseudocount	0.01015
/IntronModel/dssneighborfactor	0.00443125
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.15
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  1	4	8	11	15
targets 0.6035	0.6036	0.6049	0.6041	0.6044
/ExonModel/minwindowcount: checking values 5	6	8	9	11
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  5	6	8	9	11
targets 0.6037	0.6039	0.6049	0.6047	0.6041
improving parameter /IGenicModel/patpseudocount curently set to 5.0
0.5-7
/IGenicModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0.5	2.125	3.75	5.375	7
targets 0.6049	0.6049	0.6049	0.6049	0.6049
improving parameter /IntronModel/patpseudocount curently set to 5.0
0.5-7
/IntronModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0.5	2.125	3.75	5.375	7
targets 0.6047	0.6047	0.6043	0.6045	0.6049
improving parameter /IntronModel/slope_of_bandwidth curently set to 0.11875
0.05-0.6
/IntronModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 1 5 8 
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.6043	0.6041	0.6041	0.6041	0.6040
improving parameter /IntronModel/minwindowcount curently set to 8
1-8
/IntronModel/minwindowcount: checking values 1	2	4	6	8
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
values  1	2	4	6	8
targets 0.6049	0.6048	0.6048	0.6048	0.6049
improving parameter /IntronModel/asspseudocount curently set to 0.01525
0.0005-0.03
/IntronModel/asspseudocount: checking values 0.0005	0.007875	0.01525	0.022625	0.03
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8655, 0.7111, 0.5924, 0.6400, 0.1143, 0.0800, -1.00, -1.00, optimal target: 0.6050
changing /IntronModel/asspseudocount to 0.0005
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	50
/IntronModel/d	950
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	8
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	8
/IntronModel/asspseudocount	0.0005
/IntronModel/dsspseudocount	0.01015
/IntronModel/dssneighborfactor	0.00443125
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.15
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0.0005	0.007875	0.01525	0.022625	0.03
targets 0.6050	0.6049	0.6049	0.6049	0.6049
/IntronModel/asspseudocount: checking values 0.0005	0.00234375	0.0041875	0.00603125	0.007875
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 8 1 
retrieve accuracy from previous computation
values  0.0005	0.00234375	0.0041875	0.00603125	0.007875
targets 0.6050	0.6050	0.6050	0.6050	0.6049
improving parameter /IntronModel/dsspseudocount curently set to 0.01015
0.0002-0.04
/IntronModel/dsspseudocount: checking values 0.0002	0.01015	0.0201	0.03005	0.04
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0.0002	0.01015	0.0201	0.03005	0.04
targets 0.6048	0.6050	0.6042	0.6041	0.6031
improving parameter /IntronModel/dssneighborfactor curently set to 0.00443125
0.0001-0.01
/IntronModel/dssneighborfactor: checking values 0.0001	0.002575	0.00505	0.007525	0.01
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 6 4 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0.0001	0.002575	0.00505	0.007525	0.01
targets 0.6019	0.6039	0.6046	0.6046	0.6042
improving parameter /ExonModel/minPatSum curently set to 233.3
100-600
/ExonModel/minPatSum: checking values 100	225	350	475	600
bucket 4 6 2 3 7 1 5 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  100	225	350	475	600
targets 0.6048	0.6040	0.6032	0.6025	0.6020
improving parameter /Constant/probNinCoding curently set to 0.15
0.15-.25
/Constant/probNinCoding: checking values 0.15	0.175	0.2	0.225	0.25
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0.15	0.175	0.2	0.225	0.25
targets 0.6050	0.6047	0.6044	0.6034	0.6022
improving parameter /Constant/decomp_num_steps curently set to 1
1-5
/Constant/decomp_num_steps: checking values 1	2	3	4	5
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 1 5 8 
values  1	2	3	4	5
targets 0.6050	0.6014	0.6007	0.6004	0.5997
improving parameter /Constant/dss_end curently set to 4
1-4
/Constant/dss_end: checking values 1	2	3	4
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
values  1	2	3	4
targets 0.5638	0.5757	0.5979	0.6050
improving parameter /Constant/dss_start curently set to 2
1-3
/Constant/dss_start: checking values 1	2	3
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
values  1	2	3
targets 0.6000	0.6050	0.5976
improving parameter /Constant/ass_start curently set to 3
1-3
/Constant/ass_start: checking values 1	2	3
bucket 4 6 2 3 7 1 5 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  1	2	3
targets 0.5984	0.6010	0.6050
improving parameter /Constant/ass_end curently set to 1
0-4
/Constant/ass_end: checking values 0	1	2	3	4
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0	1	2	3	4
targets 0.5994	0.6050	0.6008	0.5888	0.5560
improving parameter /Constant/ass_upwindow_size curently set to 50
1-50
/Constant/ass_upwindow_size: checking values 1	13	25	37	50
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
values  1	13	25	37	50
targets 0.5718	0.5973	0.6018	0.6033	0.6050
improving parameter /IntronModel/d curently set to 950
100-950
/IntronModel/d: checking values 100	312	525	737	950
bucket 4 6 2 3 7 1 5 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
values  100	312	525	737	950
targets 0.6001	0.5986	0.6032	0.6031	0.6050
improving parameter /IntronModel/ass_motif_memory curently set to 3
0-3
/IntronModel/ass_motif_memory: checking values 0	1	2	3
bucket 4 6 2 3 7 1 5 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5897	0.5999	0.6031	0.6050
improving parameter /IntronModel/ass_motif_radius curently set to 4
0-4
/IntronModel/ass_motif_radius: checking values 0	1	2	3	4
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
values  0	1	2	3	4
targets 0.5938	0.6014	0.6034	0.6035	0.6050
improving parameter /ExonModel/tis_motif_memory curently set to 2
0-3
/ExonModel/tis_motif_memory: checking values 0	1	2	3
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 1 5 8 
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
values  0	1	2	3
targets 0.5997	0.6013	0.6050	0.5997
improving parameter /ExonModel/tis_motif_radius curently set to 2
0-3
/ExonModel/tis_motif_radius: checking values 0	1	2	3
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
values  0	1	2	3
targets 0.6005	0.6036	0.6050	0.6027
improving parameter /Constant/trans_init_window curently set to 20
0-25
/Constant/trans_init_window: checking values 0	6	12	18	25
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 1 5 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0	6	12	18	25
targets 0.5975	0.6006	0.6014	0.6038	0.6030
improving parameter /Constant/init_coding_len curently set to 18
0-18
/Constant/init_coding_len: checking values 0	4	9	13	18
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 1 5 8 
retrieve accuracy from previous computation
values  0	4	9	13	18
targets 0.6012	0.5998	0.5988	0.6008	0.6050
improving parameter /ExonModel/patpseudocount curently set to 0.5
0.5-5
/ExonModel/patpseudocount: checking values 0.5	1.625	2.75	3.875	5
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0.5	1.625	2.75	3.875	5
targets 0.6050	0.6048	0.6035	0.6028	0.6026
improving parameter /ExonModel/etpseudocount curently set to 3
0-10
/ExonModel/etpseudocount: checking values 0	2	5	7	10
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 1 5 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0	2	5	7	10
targets 0.6050	0.6050	0.6050	0.6050	0.6050
improving parameter /ExonModel/etorder curently set to 2
0-3
/ExonModel/etorder: checking values 0	1	2	3
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
values  0	1	2	3
targets 0.6050	0.6050	0.6050	0.6050
improving parameter /Constant/intterm_coding_len curently set to 13
0-13
/Constant/intterm_coding_len: checking values 0	3	6	9	13
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  0	3	6	9	13
targets 0.6028	0.6018	0.6038	0.6029	0.6050
improving parameter /ExonModel/slope_of_bandwidth curently set to 0.3
0.05-0.6
/ExonModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
found improvement: 0.8655, 0.7112, 0.5926, 0.6404, 0.1143, 0.0800, -1.00, -1.00, optimal target: 0.6051
changing /ExonModel/slope_of_bandwidth to 0.325
/Constant/dss_end	4
/Constant/dss_start	2
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	50
/IntronModel/d	950
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	2
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	18
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	13
/ExonModel/slope_of_bandwidth	0.325
/ExonModel/minwindowcount	8
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.11875
/IntronModel/minwindowcount	8
/IntronModel/asspseudocount	0.0005
/IntronModel/dsspseudocount	0.01015
/IntronModel/dssneighborfactor	0.00443125
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.15
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_parameters.cfg...
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.6043	0.6041	0.6051	0.6050	0.6035
/ExonModel/slope_of_bandwidth: checking values 0.1875	0.25625	0.325	0.39375	0.4625
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  0.1875	0.25625	0.325	0.39375	0.4625
targets 0.6041	0.6047	0.6051	0.6044	0.6050
improving parameter /ExonModel/minwindowcount curently set to 8
1-15
/ExonModel/minwindowcount: checking values 1	4	8	11	15
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  1	4	8	11	15
targets 0.6039	0.6038	0.6051	0.6045	0.6045
improving parameter /IGenicModel/patpseudocount curently set to 5.0
0.5-7
/IGenicModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0.5	2.125	3.75	5.375	7
targets 0.6051	0.6051	0.6051	0.6051	0.6051
improving parameter /IntronModel/patpseudocount curently set to 5.0
0.5-7
/IntronModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
bucket 4 6 2 7 3 1 5 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0.5	2.125	3.75	5.375	7
targets 0.6047	0.6047	0.6050	0.6050	0.6049
improving parameter /IntronModel/slope_of_bandwidth curently set to 0.11875
0.05-0.6
/IntronModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 1 5 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.6045	0.6045	0.6044	0.6043	0.6042
improving parameter /IntronModel/minwindowcount curently set to 8
1-8
/IntronModel/minwindowcount: checking values 1	2	4	6	8
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
values  1	2	4	6	8
targets 0.6051	0.6051	0.6049	0.6049	0.6051
improving parameter /IntronModel/asspseudocount curently set to 0.0005
0.0005-0.03
/IntronModel/asspseudocount: checking values 0.0005	0.007875	0.01525	0.022625	0.03
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0.0005	0.007875	0.01525	0.022625	0.03
targets 0.6051	0.6051	0.6051	0.6051	0.6051
improving parameter /IntronModel/dsspseudocount curently set to 0.01015
0.0002-0.04
/IntronModel/dsspseudocount: checking values 0.0002	0.01015	0.0201	0.03005	0.04
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0.0002	0.01015	0.0201	0.03005	0.04
targets 0.6050	0.6051	0.6048	0.6047	0.6033
improving parameter /IntronModel/dssneighborfactor curently set to 0.00443125
0.0001-0.01
/IntronModel/dssneighborfactor: checking values 0.0001	0.002575	0.00505	0.007525	0.01
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0.0001	0.002575	0.00505	0.007525	0.01
targets 0.6019	0.6039	0.6048	0.6046	0.6041
improving parameter /ExonModel/minPatSum curently set to 233.3
100-600
/ExonModel/minPatSum: checking values 100	225	350	475	600
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 1 5 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  100	225	350	475	600
targets 0.6047	0.6045	0.6032	0.6025	0.6024
improving parameter /Constant/probNinCoding curently set to 0.15
0.15-.25
/Constant/probNinCoding: checking values 0.15	0.175	0.2	0.225	0.25
retrieve accuracy from previous computation
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0.15	0.175	0.2	0.225	0.25
targets 0.6051	0.6048	0.6046	0.6035	0.6023
improving parameter /Constant/decomp_num_steps curently set to 1
1-5
/Constant/decomp_num_steps: checking values 1	2	3	4	5
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 1 5 8 
values  1	2	3	4	5
targets 0.6051	0.6015	0.6005	0.6005	0.5997
improving parameter /Constant/dss_end curently set to 4
1-4
/Constant/dss_end: checking values 1	2	3	4
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  1	2	3	4
targets 0.5640	0.5757	0.5978	0.6051
improving parameter /Constant/dss_start curently set to 2
1-3
/Constant/dss_start: checking values 1	2	3
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
values  1	2	3
targets 0.6000	0.6051	0.5974
improving parameter /Constant/ass_start curently set to 3
1-3
/Constant/ass_start: checking values 1	2	3
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  1	2	3
targets 0.5985	0.6010	0.6051
improving parameter /Constant/ass_end curently set to 1
0-4
/Constant/ass_end: checking values 0	1	2	3	4
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0	1	2	3	4
targets 0.5994	0.6051	0.6010	0.5886	0.5559
improving parameter /Constant/ass_upwindow_size curently set to 50
1-50
/Constant/ass_upwindow_size: checking values 1	13	25	37	50
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
values  1	13	25	37	50
targets 0.5717	0.5974	0.6016	0.6034	0.6051
improving parameter /IntronModel/d curently set to 950
100-950
/IntronModel/d: checking values 100	312	525	737	950
bucket 6 4 2 3 7 1 5 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 5 3 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  100	312	525	737	950
targets 0.6000	0.5985	0.6033	0.6032	0.6051
improving parameter /IntronModel/ass_motif_memory curently set to 3
0-3
/IntronModel/ass_motif_memory: checking values 0	1	2	3
bucket 4 6 2 3 7 1 5 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5900	0.6002	0.6029	0.6051
improving parameter /IntronModel/ass_motif_radius curently set to 4
0-4
/IntronModel/ass_motif_radius: checking values 0	1	2	3	4
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  0	1	2	3	4
targets 0.5946	0.6017	0.6034	0.6034	0.6051
improving parameter /ExonModel/tis_motif_memory curently set to 2
0-3
/ExonModel/tis_motif_memory: checking values 0	1	2	3
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
values  0	1	2	3
targets 0.5999	0.6013	0.6051	0.5997
improving parameter /ExonModel/tis_motif_radius curently set to 2
0-3
/ExonModel/tis_motif_radius: checking values 0	1	2	3
bucket 4 6 2 7 3 1 5 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
values  0	1	2	3
targets 0.6007	0.6036	0.6051	0.6028
improving parameter /Constant/trans_init_window curently set to 20
0-25
/Constant/trans_init_window: checking values 0	6	12	18	25
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0	6	12	18	25
targets 0.5979	0.6007	0.6015	0.6040	0.6030
improving parameter /Constant/init_coding_len curently set to 18
0-18
/Constant/init_coding_len: checking values 0	4	9	13	18
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  0	4	9	13	18
targets 0.6013	0.5999	0.5987	0.6007	0.6051
improving parameter /ExonModel/patpseudocount curently set to 0.5
0.5-5
/ExonModel/patpseudocount: checking values 0.5	1.625	2.75	3.875	5
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
values  0.5	1.625	2.75	3.875	5
targets 0.6051	0.6049	0.6036	0.6029	0.6025
improving parameter /ExonModel/etpseudocount curently set to 3
0-10
/ExonModel/etpseudocount: checking values 0	2	5	7	10
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 1 5 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
values  0	2	5	7	10
targets 0.6051	0.6051	0.6051	0.6051	0.6051
improving parameter /ExonModel/etorder curently set to 2
0-3
/ExonModel/etorder: checking values 0	1	2	3
bucket 4 6 2 3 7 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
bucket 4 6 2 7 3 5 1 8 
values  0	1	2	3
targets 0.6051	0.6051	0.6051	0.6051
improving parameter /Constant/intterm_coding_len curently set to 13
0-13
/Constant/intterm_coding_len: checking values 0	3	6	9	13
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 3 7 1 5 8 
bucket 4 6 2 7 3 5 1 8 
bucket 4 6 2 7 3 5 1 8 
retrieve accuracy from previous computation
values  0	3	6	9	13
targets 0.6029	0.6019	0.6039	0.6028	0.6051
improving parameter /ExonModel/slope_of_bandwidth curently set to 0.325
0.05-0.6
/ExonModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.6043	0.6041	0.6051	0.6050	0.6035
improving parameter /ExonModel/minwindowcount curently set to 8
1-15
/ExonModel/minwindowcount: checking values 1	4	8	11	15
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	4	8	11	15
targets 0.6039	0.6038	0.6051	0.6045	0.6045
improving parameter /IGenicModel/patpseudocount curently set to 5.0
0.5-7
/IGenicModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	2.125	3.75	5.375	7
targets 0.6051	0.6051	0.6051	0.6051	0.6051
improving parameter /IntronModel/patpseudocount curently set to 5.0
0.5-7
/IntronModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	2.125	3.75	5.375	7
targets 0.6047	0.6047	0.6050	0.6050	0.6049
improving parameter /IntronModel/slope_of_bandwidth curently set to 0.11875
0.05-0.6
/IntronModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.6045	0.6045	0.6044	0.6043	0.6042
improving parameter /IntronModel/minwindowcount curently set to 8
1-8
/IntronModel/minwindowcount: checking values 1	2	4	6	8
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	4	6	8
targets 0.6051	0.6051	0.6049	0.6049	0.6051
improving parameter /IntronModel/asspseudocount curently set to 0.0005
0.0005-0.03
/IntronModel/asspseudocount: checking values 0.0005	0.007875	0.01525	0.022625	0.03
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0005	0.007875	0.01525	0.022625	0.03
targets 0.6051	0.6051	0.6051	0.6051	0.6051
improving parameter /IntronModel/dsspseudocount curently set to 0.01015
0.0002-0.04
/IntronModel/dsspseudocount: checking values 0.0002	0.01015	0.0201	0.03005	0.04
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0002	0.01015	0.0201	0.03005	0.04
targets 0.6050	0.6051	0.6048	0.6047	0.6033
improving parameter /IntronModel/dssneighborfactor curently set to 0.00443125
0.0001-0.01
/IntronModel/dssneighborfactor: checking values 0.0001	0.002575	0.00505	0.007525	0.01
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0001	0.002575	0.00505	0.007525	0.01
targets 0.6019	0.6039	0.6048	0.6046	0.6041
improving parameter /ExonModel/minPatSum curently set to 233.3
100-600
/ExonModel/minPatSum: checking values 100	225	350	475	600
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  100	225	350	475	600
targets 0.6047	0.6045	0.6032	0.6025	0.6024
improving parameter /Constant/probNinCoding curently set to 0.15
0.15-.25
/Constant/probNinCoding: checking values 0.15	0.175	0.2	0.225	0.25
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.15	0.175	0.2	0.225	0.25
targets 0.6051	0.6048	0.6046	0.6035	0.6023
improving parameter /Constant/decomp_num_steps curently set to 1
1-5
/Constant/decomp_num_steps: checking values 1	2	3	4	5
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3	4	5
targets 0.6051	0.6015	0.6005	0.6005	0.5997
improving parameter /Constant/dss_end curently set to 4
1-4
/Constant/dss_end: checking values 1	2	3	4
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3	4
targets 0.5640	0.5757	0.5978	0.6051
improving parameter /Constant/dss_start curently set to 2
1-3
/Constant/dss_start: checking values 1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3
targets 0.6000	0.6051	0.5974
improving parameter /Constant/ass_start curently set to 3
1-3
/Constant/ass_start: checking values 1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3
targets 0.5985	0.6010	0.6051
improving parameter /Constant/ass_end curently set to 1
0-4
/Constant/ass_end: checking values 0	1	2	3	4
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3	4
targets 0.5994	0.6051	0.6010	0.5886	0.5559
improving parameter /Constant/ass_upwindow_size curently set to 50
1-50
/Constant/ass_upwindow_size: checking values 1	13	25	37	50
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	13	25	37	50
targets 0.5717	0.5974	0.6016	0.6034	0.6051
improving parameter /IntronModel/d curently set to 950
100-950
/IntronModel/d: checking values 100	312	525	737	950
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  100	312	525	737	950
targets 0.6000	0.5985	0.6033	0.6032	0.6051
improving parameter /IntronModel/ass_motif_memory curently set to 3
0-3
/IntronModel/ass_motif_memory: checking values 0	1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5900	0.6002	0.6029	0.6051
improving parameter /IntronModel/ass_motif_radius curently set to 4
0-4
/IntronModel/ass_motif_radius: checking values 0	1	2	3	4
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3	4
targets 0.5946	0.6017	0.6034	0.6034	0.6051
improving parameter /ExonModel/tis_motif_memory curently set to 2
0-3
/ExonModel/tis_motif_memory: checking values 0	1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5999	0.6013	0.6051	0.5997
improving parameter /ExonModel/tis_motif_radius curently set to 2
0-3
/ExonModel/tis_motif_radius: checking values 0	1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.6007	0.6036	0.6051	0.6028
improving parameter /Constant/trans_init_window curently set to 20
0-25
/Constant/trans_init_window: checking values 0	6	12	18	25
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	6	12	18	25
targets 0.5979	0.6007	0.6015	0.6040	0.6030
improving parameter /Constant/init_coding_len curently set to 18
0-18
/Constant/init_coding_len: checking values 0	4	9	13	18
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	4	9	13	18
targets 0.6013	0.5999	0.5987	0.6007	0.6051
improving parameter /ExonModel/patpseudocount curently set to 0.5
0.5-5
/ExonModel/patpseudocount: checking values 0.5	1.625	2.75	3.875	5
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	1.625	2.75	3.875	5
targets 0.6051	0.6049	0.6036	0.6029	0.6025
improving parameter /ExonModel/etpseudocount curently set to 3
0-10
/ExonModel/etpseudocount: checking values 0	2	5	7	10
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	2	5	7	10
targets 0.6051	0.6051	0.6051	0.6051	0.6051
improving parameter /ExonModel/etorder curently set to 2
0-3
/ExonModel/etorder: checking values 0	1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.6051	0.6051	0.6051	0.6051
improving parameter /Constant/intterm_coding_len curently set to 13
0-13
/Constant/intterm_coding_len: checking values 0	3	6	9	13
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	3	6	9	13
targets 0.6029	0.6019	0.6039	0.6028	0.6051
improving parameter /ExonModel/slope_of_bandwidth curently set to 0.325
0.05-0.6
/ExonModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.6043	0.6041	0.6051	0.6050	0.6035
improving parameter /ExonModel/minwindowcount curently set to 8
1-15
/ExonModel/minwindowcount: checking values 1	4	8	11	15
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	4	8	11	15
targets 0.6039	0.6038	0.6051	0.6045	0.6045
improving parameter /IGenicModel/patpseudocount curently set to 5.0
0.5-7
/IGenicModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	2.125	3.75	5.375	7
targets 0.6051	0.6051	0.6051	0.6051	0.6051
improving parameter /IntronModel/patpseudocount curently set to 5.0
0.5-7
/IntronModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	2.125	3.75	5.375	7
targets 0.6047	0.6047	0.6050	0.6050	0.6049
improving parameter /IntronModel/slope_of_bandwidth curently set to 0.11875
0.05-0.6
/IntronModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.6045	0.6045	0.6044	0.6043	0.6042
improving parameter /IntronModel/minwindowcount curently set to 8
1-8
/IntronModel/minwindowcount: checking values 1	2	4	6	8
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	4	6	8
targets 0.6051	0.6051	0.6049	0.6049	0.6051
improving parameter /IntronModel/asspseudocount curently set to 0.0005
0.0005-0.03
/IntronModel/asspseudocount: checking values 0.0005	0.007875	0.01525	0.022625	0.03
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0005	0.007875	0.01525	0.022625	0.03
targets 0.6051	0.6051	0.6051	0.6051	0.6051
improving parameter /IntronModel/dsspseudocount curently set to 0.01015
0.0002-0.04
/IntronModel/dsspseudocount: checking values 0.0002	0.01015	0.0201	0.03005	0.04
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0002	0.01015	0.0201	0.03005	0.04
targets 0.6050	0.6051	0.6048	0.6047	0.6033
improving parameter /IntronModel/dssneighborfactor curently set to 0.00443125
0.0001-0.01
/IntronModel/dssneighborfactor: checking values 0.0001	0.002575	0.00505	0.007525	0.01
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0001	0.002575	0.00505	0.007525	0.01
targets 0.6019	0.6039	0.6048	0.6046	0.6041
improving parameter /ExonModel/minPatSum curently set to 233.3
100-600
/ExonModel/minPatSum: checking values 100	225	350	475	600
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  100	225	350	475	600
targets 0.6047	0.6045	0.6032	0.6025	0.6024
improving parameter /Constant/probNinCoding curently set to 0.15
0.15-.25
/Constant/probNinCoding: checking values 0.15	0.175	0.2	0.225	0.25
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.15	0.175	0.2	0.225	0.25
targets 0.6051	0.6048	0.6046	0.6035	0.6023
improving parameter /Constant/decomp_num_steps curently set to 1
1-5
/Constant/decomp_num_steps: checking values 1	2	3	4	5
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3	4	5
targets 0.6051	0.6015	0.6005	0.6005	0.5997
Making final training with the optimized parameters.
etraining --species=BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482 --AUGUSTUS_CONFIG_PATH=/gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/ --/augustus/verbosity=0 --/ExonModel/verbosity=0 --/IGenicModel/verbosity=0 --/IntronModel/verbosity=0 --/UtrModel/verbosity=0 --/genbank/verbosity=0 tmp_opt_BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/curtrain  
# Read in 640 genbank sequences.
Quantiles of the GC contents in the training set:
0%	0.294
5%	0.325	10%	0.328
15%	0.33	20%	0.332
25%	0.334	30%	0.335
35%	0.336	40%	0.337
45%	0.338	50%	0.34
55%	0.341	60%	0.342
65%	0.343	70%	0.344
75%	0.345	80%	0.348
85%	0.35	90%	0.352
95%	0.357	100%	0.406
HMM-training the parameters...
i= 0 bc= (0.237, 0.263, 0.263, 0.237)
 ** building model for exons *EXON*
gene g1.t1 transcr. 1 in sequence PGA_scaffold10__49_contigs__length_53961475_29538178-29548657: Terminal exon doesn't end in stop codon. Variable stopCodonExcludedFromCDS set right?
gene g1.t1 transcr. 1 in sequence PGA_scaffold6__104_contigs__length_61759565_56473105-56522095: Initial exon does not begin with start codon but with ggt
gene g3.t1 transcr. 1 in sequence PGA_scaffold14__91_contigs__length_45393038_3246320-3253849: Terminal exon doesn't end in stop codon. Variable stopCodonExcludedFromCDS set right?
gene g1.t1 transcr. 1 in sequence PGA_scaffold8__63_contigs__length_61151155_43614820-43644861: Initial exon does not begin with start codon but with gac
gene g1.t1 transcr. 1 in sequence PGA_scaffold212__1_contigs__length_26332_1-9625: Initial exon does not begin with start codon but with tta
gene g3.t1 transcr. 1 in sequence PGA_scaffold3__111_contigs__length_57743597_49797482-49826206: coding length not a multiple of 3. Skipping...
gene g2.t1 transcr. 1 in sequence PGA_scaffold59171__1_contigs__length_43122_27782-43122: Terminal exon doesn't end in stop codon. Variable stopCodonExcludedFromCDS set right?
gene g1.t1 transcr. 1 in sequence PGA_scaffold53018__1_contigs__length_28564_133-22612: Initial exon does not begin with start codon but with gaa
gene g1.t1 transcr. 1 in sequence PGA_scaffold6__104_contigs__length_61759565_16227653-16280711: Terminal exon doesn't end in stop codon. Variable stopCodonExcludedFromCDS set right?
gene g1.t1 transcr. 1 in sequence PGA_scaffold15__101_contigs__length_47938513_4546049-4566560: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold6__104_contigs__length_61759565_28812419-28821414: coding length not a multiple of 3. Skipping...
gene g2.t1 transcr. 1 in sequence PGA_scaffold8__63_contigs__length_61151155_20446070-20472602: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold13__52_contigs__length_44396874_30276104-30283855: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold2__36_contigs__length_69596280_32837088-32842122: coding length not a multiple of 3. Skipping...
gene g2.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_17493052-17505227: Initial exon does not begin with start codon but with cta
gene g1.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_87407336-87435375: Terminal exon doesn't end in stop codon. Variable stopCodonExcludedFromCDS set right?
gene g1.t1 transcr. 1 in sequence PGA_scaffold69250__1_contigs__length_10644_6968-10312: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold4__129_contigs__length_65288255_44248226-44259300: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold50467__1_contigs__length_19553_6600-19502: coding length not a multiple of 3. Skipping...
gene g3.t1 transcr. 1 in sequence PGA_scaffold58106__1_contigs__length_15949_9863-15752: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_1865439-1893032: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold66325__1_contigs__length_13533_1089-13533: Initial exon does not begin with start codon but with gga
gene g1.t1 transcr. 1 in sequence PGA_scaffold53508__1_contigs__length_19204_3763-17406: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold16__33_contigs__length_31980953_31287400-31332878: coding length not a multiple of 3. Skipping...
start codon frequencies: ATG(620), CTG(1)
# admissible start codons and their probabilities: ATG(0.998), CTG(0.00161), TTG(0)
 number of bases in the reading frames: 248226 247858 248672
--- frame = 0 ---    minPatSum = 233
--- frame = 1 ---    minPatSum = 233
--- frame = 2 ---    minPatSum = 233
--- initial frame = 0 ---    minPatSum = 233
--- initial frame = 1 ---    minPatSum = 233
--- initial frame = 2 ---    minPatSum = 233
--- internal exon terminal frame = 0 ---    minPatSum = 233
--- internal exon terminal frame = 1 ---    minPatSum = 233
--- internal exon terminal frame = 2 ---    minPatSum = 233
single, initial, internal, terminal mean exon lengths :
828	118	105	165
single exon : 10
initial exon 0 : 267
initial exon 1 : 186
initial exon 2 : 158
internal exon 0 : 2424
internal exon 1 : 1694
internal exon 2 : 1551
terminal exon : 612
Frequency of stop codons:
tag:  145 (0.233)
taa:  205 (0.33)
tga:  272 (0.437)
end *EXON*
Storing parameters to file...
Writing exon model parameters [1] to file /gscratch/scrubbed/samwhite/outputs/20190228_pgen_busco_metazoa_augustus/augustus/config/species/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482/BUSCO_Pgenerosa_v071_genome_snap02.all.maker_1223389482_exon_probs.pbl.
Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
examining piece 1..12232 (12232 bp)
examining piece 1..10602 (10602 bp)
viterbi algorithm progress:
[%]: viterbi algorithm progress:
[%]: ..Warning: Block unknown_E is not significant enough, removed from profile.
examining piece 1..13076 (13076 bp)
examining piece examining piece 11....1130710602 ( (1130710602 bp) bp)

viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: ...examining piece 1..11823 (11823 bp)
examining piece 1..13143 (13143 bp)
examining piece 1..13999 (13999 bp)
.viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ..examining piece 1..17455 (17455 bp)
viterbi algorithm progress:
[%]: ....examining piece 7840..32090 (24251 bp)
viterbi algorithm progress:
[%]: .examining piece 1..10632 (10632 bp)
...viterbi algorithm progress:
[%]: .....viterbi algorithm progress:
[%]: ................10............10.................10......10..........10........10....10..................1020.............10...................20..20...20.20.....10..10............20..20......................20.......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
...30Warning: Block unknown_I is not significant enough, removed from profile.
............20......3030...30...30...............30...................Warning: Block unknown_J is not significant enough, removed from profile.
....30..20..Warning: Block unknown_A is not significant enough, removed from profile.
..........30..40.....................40..40.4030.....40.......40.20.......................................40..50....examining piece 18030503..18070637 (40135 bp)
...Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
...viterbi algorithm progress:
[%]: ...40..5030...50........40..50....50.................Warning: Block unknown_C is not significant enough, removed from profile.
..Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.....50...60.......................Warning: Block unknown_B is not significant enough, removed from profile.
50examining piece 15904677..15947545 (42869 bp)
Warning: Block unknown_C is not significant enough, removed from profile.
.Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.Warning: Block unknown_L is not significant enough, removed from profile.
...Warning: Block unknown_Pexamining piece 30472929..30517207 (44279. is not significant enough, removed from profile.
 bp)
...60Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
60...viterbi algorithm progress:
[%]: .............Warning: Block unknown_B is not significant enough, removed from profile.
...Warning: Block unknown_C is not significant enough, removed from profile.
....60.....50......6040...50......70...60...................................70.....60.........70...examining piece 25112986..25153120 (40135 bp)
..........70..60..........70..........60...80.30.50.....7010........80..viterbi algorithm progress:
[%]: ....examining piece 23511411..23551590 (40180 bp)
.examining piece 24872097..24912273 (40177 bp)
............examining piece 74651..114947 (40297 bp)
..viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: .................viterbi algorithm progress:
[%]: ..examining piece 14170769..14210952 (40184 bp)
.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
....70...80.viterbi algorithm progress:
[%]: ......80Warning: Block unknown_D is not significant enough, removed from profile.
.70..examining piece 6459471..6501851 (42381 bp)
......80.....70.viterbi algorithm progress:
[%]: ...examining piece 20576700..20620520 (43821 bp)
...........90..........viterbi algorithm progress:
[%]: ....90.........10........8060.............................examining piece 24810197..24850364 (40168 bp)
.examining piece 5994954..6041797 (46844 bp)
................viterbi algorithm progress:
[%]: .90..viterbi algorithm progress:
[%]: .40....examining piece 5317932..5358108 (40177 bp)
90.10....8090.......80..100.10.......80.............................90examining piece 334697..374876 (40180 bp)
..........viterbi algorithm progress:
[%]: ........100.
viterbi algorithm progress:
[%]: ...examining piece 66549833..66589991 (40159 bp)
....................70....
.....1010......100.........100.20........sampling algorithm progress:
[%]: ....10.90.90.
...100100.........sampling algorithm progress:
[%]: 90..............viterbi algorithm progress:
[%]: .......

........10...........
..20......sampling algorithm progress:
[%]: ..10....................10.........10..10.viterbi algorithm progress:
[%]: ...20...10sampling algorithm progress:
[%]: .....sampling algorithm progress:
[%]: .....80....1020.......sampling algorithm progress:
[%]: 100...100.....................100............
......examining piece 40289682..40329771 (40090 bp)
.3030...........5010.viterbi algorithm progress:
[%]: .......
102010..
....20.............10...................examining piece 83287070..83327645 (40576 bp)
............40...viterbi algorithm progress:
[%]: .....................sampling algorithm progress:
[%]: ...3020.20.....20.......................sampling algorithm progress:
[%]: .sampling algorithm progress:
[%]: ...........5030.........................20.90.............20.40..30.........10...........30...20....30...................40....6010...........10...........50....20....4020.40...................20................40................40...........70....30........60..20.50................20.......10.30...........50..30....10010....50............................50.70.80..........60....................30........................30
......40...60...................10.60..80...70..60....30.90..50...................20.....................50...40.................40....70..90........80.100........20
........................sampling algorithm progress:
[%]: .70....70....................50.100.......examining piece 1..21486 (21486 bp)
.60.
..50.90..viterbi algorithm progress:
[%]: ....80............60................20...........40..................80.............10020.....
7060...80........90.....60........10..........................60.........10..30.9040.80................10070...30.....
...........70.................30............10040..90...
..20...examining piece 1..13076 (13076 bp)
.90....viterbi algorithm progress:
[%]: ..20......80........................80...100..70.....
......................20.......90.........30.....10....10050..20.30..90..
............70............100........
...............Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
...10020
.50.....examining piece 1..22793 (22793 bp)
...40............30...viterbi algorithm progress:
[%]: .........30.........examining piece 1..15203 (15203 bp)
.......viterbi algorithm progress:
[%]: .80......10.30............5040......20................30..........10.........50..........10.........40...60...40...........60.80.20....40.....................30.........40.......50..70...60Warning: Block unknown_A is not significant enough, removed from profile.
.........90..........30.......40......30..........30...60...........30..80.50.................20.40..........................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
..Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.Warning: Block unknown_T is not significant enough, removed from profile.
...50......10....907090...............50....examining piece 19298478..19338615 (40138 bp)
..........viterbi algorithm progress:
[%]: ..examining piece 19048258..19088599 (40342 bp)
.......viterbi algorithm progress:
[%]: .............60.100.60..
.70...80........40....100..............40...........
examining piece 1..10918 (10918 bp)
.60viterbi algorithm progress:
[%]: .............30.50.examining piece 27302155..27342448 (40294 bp)
......40........90...........1010..........70100..................10...20.....viterbi algorithm progress:
[%]: ......
..50.............70.......30........sampling algorithm progress:
[%]: 100..examining piece 30056641..30096955 (40315 bp)
..................
.................40.50...examining piece 52116678..52156932 (40255 bp)
..40.....viterbi algorithm progress:
[%]: ...viterbi algorithm progress:
[%]: .........8020.....sampling algorithm progress:
[%]: ...sampling algorithm progress:
[%]: 80..........80..50....10........10....................10...........................60...2060.........30..40....20.........................90...............70......30........70.20.......103040..5060...............90.40..8020.....................50..........................5010.................100....90...30................603090...
.......40.........................20100..........70....
..40.........sampling algorithm progress:
[%]: ....100.............40.30...80...sampling algorithm progress:
[%]: ..........
...........60.......10..............10....90...20...................................202050......100..50.30
....50............Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.......30...examining piece 1..10602 (10602 bp)
...40viterbi algorithm progress:
[%]: ...7070.60.sampling algorithm progress:
[%]: ...30.......................4040.50.100......................10..............5040.............60.80.................10..
.......60...........50.......20........40............70..60...............................60....8020.30..60...................70.....................90.....7050.................50...40...100..
50.60.....70..sampling algorithm progress:
[%]: .30.20.....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.Warning: Block unknown_I is not significant enough, removed from profile.
20.....80.50..examining piece 1..11307 (11307 bp)
..viterbi algorithm progress:
[%]: ..........................80..........40.......5090.............40..........................................100.....
........60...10....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
..Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.....8050.50..examining piece 1..11307 (11307 bp)
...viterbi algorithm progress:
[%]: ..90.......60..10.60............60....60...70.70..70...20....................60........90...........80........100.......
...80..10..........30...............Warning: Block unknown_D is not significant enough, removed from profile.
......70......examining piece 1852..26545 (24694 bp)
...viterbi algorithm progress:
[%]: .60..70.........20.......9020....................40......107070.............80...................30.........................100..........50.........
....80.90....80.......40..........70...10...30sampling algorithm progress:
[%]: ................................30..60...100...10.
...................50..................20.........70......50..............90.30..90.......70............70......10040.20..604060...90.................50..30........70.80...90...................60.......
..100.50.80......
.....7070..............................80.80......50......................9030.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
.......90.................100
............100.80.....................
.....sampling algorithm progress:
[%]: 80100...70.60...............
...100..80.60.....examining piece 1124165..1164299 (40135 bp)
....40.9060....examining piece 18647707..18687787 (40081 bp)
....30...sampling algorithm progress:
[%]: .......viterbi algorithm progress:
[%]: ....
.......sampling algorithm progress:
[%]: ...80.............viterbi algorithm progress:
[%]: ........70.1010....90......................80.........100..100........20................50....
4010.......80...10..70.809030....
..80...90.....20.....sampling algorithm progress:
[%]: ...sampling algorithm progress:
[%]: ....................40...............................10................20....50.......................70..60.9020...........10...60...30...examining piece 30946349..30986468 (40120 bp)
................................30.............20...70...sampling algorithm progress:
[%]: .80..30............20..............40........100.........viterbi algorithm progress:
[%]: .
.80...20..............100..50..Warning: Block unknown_J is not significant enough, removed from profile.
.....40.70...examining piece 1..14774 (14774 bp)
...viterbi algorithm progress:
[%]: ............100...90.............40..90.......40.....901060....
....10.................100.......
.....30..............70.....
.....20..90.50..100.....30..................8050............20..80...........
..sampling algorithm progress:
[%]: .......30......90......40..............50....................100..
.60........60.......90..........30.40.10..100....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_V is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
.sampling algorithm progress:
[%]: ...50............................
...........40........90....sampling algorithm progress:
[%]: .40......7050.70.50.......................20.40.70.................60....examining piece 35943202..35983342 (40141 bp)
......viterbi algorithm progress:
[%]: ..sampling algorithm progress:
[%]: .......10...100...........60.....60...........................1080..
................80.........50.30.....30.90..100..............70.100..7010.......10.70.....................
......
.........20..................90...........8020......40...9060..80.40..20..10.........80.....80..............90............50.......sampling algorithm progress:
[%]: ....................examining piece 20110201..20154049 (43849 bp)
..........90..10030...50...sampling algorithm progress:
[%]: ...100.
......3050...100..30..70........
.............90..90..
.........viterbi algorithm progress:
[%]: .............examining piece 7900..32148 (24249 bp)
......viterbi algorithm progress:
[%]: ..........10......100......sampling algorithm progress:
[%]: ............1060.............6040.....60....
..1040...80...40............100.......20.100
..........................
.......60...............50..examining piece 1..11823 (11823 bp)
sampling algorithm progress:
[%]: viterbi algorithm progress:
[%]: ..........20.........70...........70..30.1020....10......Warning: Block unknown_A is not significant enough, removed from profile.
.sampling algorithm progress:
[%]: Warning: Block unknown_L is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
..5020..10.....90..50.....20........60.......sampling algorithm progress:
[%]: ...............................20.....30...........60..............40......................3040....................80...................100....80.30..........6040
.50..examining piece 21889264..21932111 (42848 bp)
....50...50...........30....60.20........examining piece 1..13463 (13463 bp)
70.....50viterbi algorithm progress:
[%]: .....10......80..........................60.................................60.......viterbi algorithm progress:
[%]: 40....90...10........60.......20....................90.....70.......70....70.......10.....20..80....90...............60..................8080.....40...70....70..........20............30100..........30.....
.30...90...............90......................70.....90.........100.80...100.
.....80..30....10040...50...........
.......Warning: Block unknown_B is not significant enough, removed from profile.
...
..........examining piece 51096..71876 (20781 bp)
...viterbi algorithm progress:
[%]: ....50...........80....50sampling algorithm progress:
[%]: ...30......100....sampling algorithm progress:
[%]: .....90.
..........10....40..70...........90...............20....20.........10..........100........30.......40.....100..........
.............40....60............60........50......70.90.............40......10080.60...........20....
.....50.....70..7060....10..........................8080..............40...................90....80........30.............100100.
.8050.70..50
..100........70.....30..90...................60........examining piece 8192486..8232674 (40189 bp)
.....viterbi algorithm progress:
[%]: ............40..20..100...............
10..80......80.60....100Warning: Block unknown_G is not significant enough, removed from profile.
90...............sampling algorithm progress:
[%]: ................
.............60.....70.10
......50..10.......examining piece 31845719..31887531 (41813 bp)
.....
.viterbi algorithm progress:
[%]: ..sampling algorithm progress:
[%]: 90...........2030...40.sampling algorithm progress:
[%]: ....70.90...........................30..........examining piece 26909338..26949757 (40420 bp)
...............................40..10100...........Warning: Block unknown_H is not significant enough, removed from profile.
.80......90............50..20.viterbi algorithm progress:
[%]: ....
60examining piece 71690386..71730547 (40162 bp)
....50100..100......80...
........
6040.......10...........................70....20...viterbi algorithm progress:
[%]: ..50...................sampling algorithm progress:
[%]: ......8090....sampling algorithm progress:
[%]: ..7010...sampling algorithm progress:
[%]: .............examining piece 45776626..45817117 (40492 bp)
10..90....examining piece 46460884..46510790 (49907 bp)
.............90.....70.viterbi algorithm progress:
[%]: ..............30....50viterbi algorithm progress:
[%]: ..........10.80..100.....
.................20.........30..1001080........
....100.....2010
..........................................60.........20........60.30............2010...........40...4090.........2030........30..40............................................30..........50............70.examining piece 30133457..30173861 (40405 bp)
...40..viterbi algorithm progress:
[%]: ......................50....6070...................60.......10010......40....401050.........50.....
.........20............70.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
...........30..examining piece 473441..517796 (44356 bp)
.....80.viterbi algorithm progress:
[%]: ...................50...60..................80sampling algorithm progress:
[%]: .20...........20......examining piece 24675069..24715554 (40486 bp)
....viterbi algorithm progress:
[%]: .................50............80.............101090........60.........................examining piece 33082182..33122337 (40156 bp)
..9060.................70...100....10..
20........90.....30...30.................70..3040.............viterbi algorithm progress:
[%]: .........2030...100........60................60....100...........20...
.90.....40...80..30........80................40...70........10.....50.........70.................40.................7040...6050..90..
.......................90...40........100.......70....
.5050...........30.100.........
.........80........80.........10...........80...........examining piece 68922210..68962689 (40480 bp)
...viterbi algorithm progress:
[%]: ...90.....5060.................100.....8060........100
.60
...........10.........70..........50....sampling algorithm progress:
[%]: ...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
90.......40...70examining piece 40064270..40107729 (43460 bp)
....viterbi algorithm progress:
[%]: ..sampling algorithm progress:
[%]: .90..........20......Warning: Block unknown_F is not significant enough, removed from profile.
................................1060..................examining piece 26552693..26594638 (41946 bp)
..10viterbi algorithm progress:
[%]: .1007030....20....70.80100.........10..
...70.........80...Warning: Block unknown_F is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_V is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
...examining piece 53717172..53760506 (43335 bp)
.examining piece 1..19284 (19284 bp)
20.....viterbi algorithm progress:
[%]: .......90.............................20.viterbi algorithm progress:
[%]: ......1020.....40....
...60...................10....50.2030................70...90....................examining piece 49330237..49370395 (40159 bp)
80....viterbi algorithm progress:
[%]: .....30..50.......8010........30...............10......40..................20.............10..10......30.......2090...20...............................4060...100...50........
..70.........40..........20............100....80........30.90...........sampling algorithm progress:
[%]: 40.........sampling algorithm progress:
[%]: 20.......90..60.60..................70..
....................5030............30..........................50...10..10...50.70..........90.40..............................80.............40100.........90.....90...
..sampling algorithm progress:
[%]: .....20.......80...........20........60.......60......80.60...........100...40....80.........5050........
3010.......70.....90.......100..............30...................................70............100...........40..100.20
...
....Warning: Block unknown_A is not significant enough, removed from profile.
...sampling algorithm progress:
[%]: ..6070.60.....Warning: Block unknown_A is not significant enough, removed from profile.
......40...90.examining piece 1..19313 (19313 bp)
..viterbi algorithm progress:
[%]: ....70.............50...........50........................301080....examining piece 35977469..36017573 (40105 bp)
........viterbi algorithm progress:
[%]: .........10.......20...................50...............20.....30...........
..70....60.............40.........40..10070...........80..10...Warning: Block unknown_A is not significant enough, removed from profile.

50........90...20................60....100..60............70....80.............50..80.......70.....60.sampling algorithm progress:
[%]: ....examining piece 43228384..43269139 (40756 bp)
................viterbi algorithm progress:
[%]: ....80.sampling algorithm progress:
[%]: ....80............30............100......
..........20
.70....8090...................60....Warning: Block unknown_A is not significant enough, removed from profile.
.........examining piece 1..19313 (19313 bp)
.80...viterbi algorithm progress:
[%]: .10.10.100............
.........90...20.......90..sampling algorithm progress:
[%]: ......40.......................10................90.10.20....80...............9030..2090....70............10....2020...............30...........................90.30.50..........40..........70............100...30....40...
..............50.................90..sampling algorithm progress:
[%]: .50.80......30................60.....90................60.........40...........60.90..70..........40..........70............100...........20.80.100...............10.....100.80......90.40..50.
..
.90...........................90...................100...
..70....
......100......30.
......100.sampling algorithm progress:
[%]: ....60.......20..100..50....100.100.
........80.10...........sampling algorithm progress:
[%]: ....
.......50.
...30sampling algorithm progress:
[%]: 20.70.Warning: Block unknown_I is not significant enough, removed from profile.
...80.......100.....................30.30.................60........sampling algorithm progress:
[%]: ........40.....
......80...30.........10...........Warning: Block unknown_G is not significant enough, removed from profile.
..50.....sampling algorithm progress:
[%]: 10...90................30.........40..examining piece 60652919..60700415 (47497 bp)
.60......100.......70....................40.9070..2030..........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
..................
.sampling algorithm progress:
[%]: ...100...viterbi algorithm progress:
[%]: ..80.......
..50......60examining piece 18647384..18688175 (40792 bp)
.10..examining piece 17899421..17939750 (40330 bp)
........viterbi algorithm progress:
[%]: ..20.......90.....80...................30...........10090...
.10..viterbi algorithm progress:
[%]: .100.......10......................examining piece 1933900..1974049 (40150 bp)
.8060....viterbi algorithm progress:
[%]: .50.........20
.........90..10..40.20...........30.....sampling algorithm progress:
[%]: ...................10...................30........sampling algorithm progress:
[%]: ...70...................50.30100.Warning: Block unknown_G is not significant enough, removed from profile.

40......
.30100..............70.......20....10..sampling algorithm progress:
[%]: ..........60.40..........20.....40...
80................60....20.....examining piece 2809758..2849940 (40183 bp)
.......viterbi algorithm progress:
[%]: .............40.........sampling algorithm progress:
[%]: ..30........50...20..........100..........................50....9070......10.......................
...........60.70...5010......Warning: Block unknown_F is not significant enough, removed from profile.
...40........30..examining piece 15466813..15513553 (46741 bp)
80......30....10...........8010.....viterbi algorithm progress:
[%]: ............100..........
.....70....60.......................20.Warning: Block unknown_F is not significant enough, removed from profile.
.sampling algorithm progress:
[%]: ....examining piece 21863141..21905387 (42247 bp)
30examining piece 1..13311 (13311 bp)
...viterbi algorithm progress:
[%]: ...viterbi algorithm progress:
[%]: ......5060.....40.........90..........50.................80...10....10.................80...........20........................40.....30.20...............100.......50.
..70..........90.70.10....20.60...10......30.................................20.90....20...............4040....100.............
...........40...60.................10..90..50...80...40........80..........20....50.............5020.60........30.......70.........30....................7070..100..60...................30..........90..
.................8060.90.......100.....30.............
.........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
...........80.90..........30................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
80...examining piece 198735..238971 (40237 bp)
......50viterbi algorithm progress:
[%]: .100...........
.40.1003070.....sampling algorithm progress:
[%]: .......
10060..100....40......
....40...10..90.sampling algorithm progress:
[%]: ..................40........examining piece 62006619..62046777 (40159 bp)
..........10
.............examining piece 44503129..44570580 (67452 bp)
...80......viterbi algorithm progress:
[%]: ...........2040viterbi algorithm progress:
[%]: ...........................100..20..30....
......50.....90.......................40......10............90.........50...50...60....30..50.......Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.10.....60........examining piece 14340583..14383120 (42538 bp)
..50..sampling algorithm progress:
[%]: ......................7070...40.........60.......100..........
8070.10...viterbi algorithm progress:
[%]: ...40...................100...2090................10..50.........100examining piece 13783557..13823679 (40123 bp)
..
...
40...........20..20....50............70...Warning: Block unknown_F is not significant enough, removed from profile.
......viterbi algorithm progress:
[%]: .......examining piece 1..13506 (13506 bp)
viterbi algorithm progress:
[%]: .60........10.20......60.....70....40.........sampling algorithm progress:
[%]: .................10............60.......................10..60.20..................3080.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
........10............30......30.30..........80......2050....60.................20.................40..204070........70...............70.....90....80.......................80....20...50....5030..................................examining piece 2132428..2185814 (53387 bp)
..40.viterbi algorithm progress:
[%]: ..............80............30..100..........
4060..40.....60........................70...........................80......80.50.....70....50...30..........70.70examining piece 34480391..34520570 (40180 bp)
..........50...90......viterbi algorithm progress:
[%]: ..30.............80....90........9060........60....10................50.....40.....80....90.....................................70..............100.......Warning: Block unknown_F is not significant enough, removed from profile.
..
..........50....100...90..90.90..6060...70...
80..sampling algorithm progress:
[%]: .......80.................10.....................40.20........100....................30..100......40..
..
.........40...sampling algorithm progress:
[%]: .....examining piece 25930830..25971192 (40363 bp)
.90....80..50...................Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
.....60.......examining piece 340843..381007 (40165 bp)
......viterbi algorithm progress:
[%]: .........50807070...............viterbi algorithm progress:
[%]: ...........80....100..100..
.....107090..........100.
.........100
.60..90.....
....10......60100.40.......50.20........20...................
10...80....9030..........80..90.........90.........90....40....Warning: Block unknown_A is not significant enough, removed from profile.
........examining piece 19187556..19228305 (40750 bp)
............viterbi algorithm progress:
[%]: ....sampling algorithm progress:
[%]: examining piece 16753130..16795432 (42303 bp)
........50............70.viterbi algorithm progress:
[%]: .........90....examining piece 41077818..41118021 (40204 bp)
100.........90..........6010...60...10.....viterbi algorithm progress:
[%]: ..20..
..................examining piece 37253329..37297965 (44637 bp)
..examining piece 42620185..42660298 (40114 bp)
.viterbi algorithm progress:
[%]: .......70......viterbi algorithm progress:
[%]: ..............50........70.20............sampling algorithm progress:
[%]: ............30.100...10..2080.100...100
........10...10..............
........
.......50......30.90...................20...20.........20.....60...sampling algorithm progress:
[%]: ...20....Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
100....
.................30..40................1030...examining piece 3043383..3083673 (40291 bp)
..viterbi algorithm progress:
[%]: ..3030.sampling algorithm progress:
[%]: ............................30................50................................40.........10......30....70....1010.......40.....40....4060.....................50........................20...............40......80.........20.......70...60........20.50.......80......50.Warning: Block unknown_B is not significant enough, removed from profile.
40...........50......20.................1080....30.........40.............................30..........60..........90..90....10.....40.....30.60examining piece 8003790..8043918 (40129 bp)
.......60..viterbi algorithm progress:
[%]: .........30............100.......
......70............Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
50Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
....examining piece 1..11990 (11990 bp)
viterbi algorithm progress:
[%]: ....10.60......................50.701070..........40..........408020.............................100.3060.....20.....40..70.....50.
..........40..................................50....90.................70.......80...5060...50....sampling algorithm progress:
[%]: .30......................70..........60.50......50..................80...80................................80...90.......40..........60......60..................100...905080...90...60..
..60..10.............60...sampling algorithm progress:
[%]: ............................10.................100.209010..50.....
............30.........70...........examining piece 1..16585 (16585 bp)
..viterbi algorithm progress:
[%]: .40.....................60..50...........10.......90.............60.........20....100......2070..70......
.....20........1007080.30......................
90..sampling algorithm progress:
[%]: ........70......40......100.
30..............60.....30....50100........................100...60.....sampling algorithm progress:
[%]: .............10.....70......70.................70.....80...
.80..40...80.........30....9010....................20..........100.....100...
..70...........sampling algorithm progress:
[%]: .....50..80....20..........10...70.................30.......20...........60.90..........
30......90.100.......30...40...40.............sampling algorithm progress:
[%]: .......6050...........90...40.......20....60....20................80......40....70.......80....................80examining piece 59101773..59157278 (55506 bp)

80..........sampling algorithm progress:
[%]: ..10010....50....viterbi algorithm progress:
[%]: ....90......
.............50.100.80....100..
sampling algorithm progress:
[%]: examining piece 1..24275 (24275 bp)
70.viterbi algorithm progress:
[%]: ...50...
...........90..............10...........................2060
...10..80.20......60................30..................................90.........40...........10.......7070...20.....sampling algorithm progress:
[%]: ........30.........50...60....Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
...................10............80....6080................80........................70.100....40...............examining piece 39389784..39429879 (40096 bp)
.....viterbi algorithm progress:
[%]: ....10...........90......20...
.80...........20......90..............10.70............9070...9090...50.100.......examining piece 38056566..38096682 (40117 bp)
...
.....viterbi algorithm progress:
[%]: ..........................100100....20
90...
30.207020........sampling algorithm progress:
[%]: .................sampling algorithm progress:
[%]: .......60..90.........................30..............101030.30.......10010.............................
...2080...40......................30..70.........40.20.30...20..............................40..........sampling algorithm progress:
[%]: ..40..100.....30........70.....................30...50..30...50...80............
.....50.................60.40.40............examining piece 4347719..4387931 (40213 bp)
......viterbi algorithm progress:
[%]: .....examining piece 8378718..8419176 (40459 bp)
...........viterbi algorithm progress:
[%]: ...4040....70.90...............50.10.........sampling algorithm progress:
[%]: ........................80.90..10......60.................50......................90......50...5060.100.....100....................2040.......100.......
......50..60100......20...
.............10.....30.............
...
100.......70......70.
......60...60..........60........40....30...........40.......70............80.10........20.30.100...80.90...Warning: Block unknown_C is not significant enough, removed from profile.
.......50.80...50....60.........................90......70......70......50sampling algorithm progress:
[%]: .examining piece 34486212..34526427 (40216 bp)
.......viterbi algorithm progress:
[%]: ......
.sampling algorithm progress:
[%]: ...60..20.........................100...Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
..Warning: Block unknown_O is not significant enough, removed from profile.
...
.30........40..............90......................10...80.70.........60..10..70.....30....80..........70.....80.examining piece 19825024..19865185 (40162 bp)
...examining piece 29955050..29995913 (40864 bp)
.viterbi algorithm progress:
[%]: ........................viterbi algorithm progress:
[%]: ..........50.40.60.100....10..................20................10070....20.........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
..80.40............
.....10........10.sampling algorithm progress:
[%]: .....90.90.....................90.....30.50.............60..examining piece 20904678..20944875 (40198 bp)
............sampling algorithm progress:
[%]: ......80.................40...80...90.80...20........................20......viterbi algorithm progress:
[%]: ...
......10.......40......100..................
....10..70.....100.100..50......60..........30....70.....20..10

.........20.......sampling algorithm progress:
[%]: ....50...........100.....90...................30
.........50..30...9080.....100...................sampling algorithm progress:
[%]: ....30...........20...70...40sampling algorithm progress:
[%]: 60.20..
.......sampling algorithm progress:
[%]: .10.80...40...................................100.................10..........
......60......50..........80...........10.......9070......60Warning: Block unknown_B is not significant enough, removed from profile.
..Warning: Block unknown_N is not significant enough, removed from profile.
.........sampling algorithm progress:
[%]: .....90sampling algorithm progress:
[%]: ..........10....2020.30..80...100..80..60.............90.30..
.40.................40..50.20..................................80examining piece 40722545..40762838 (40294 bp)
....viterbi algorithm progress:
[%]: ..........70..............30..30.........................................20....7040..30.30....10...........7080....90...10.100.........30......
.40..90...........10........40........90.......Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block .unknown_D is not significant enough, removed from profile.
..................examining piece 10319..30940 (20622 bp)
...viterbi algorithm progress:
[%]: ..40.......5090.................50..60.50............30......10........40..........100..................
....50.....100...examining piece 6843358..6883453 (40096 bp)
.100..2020....50
....
....viterbi algorithm progress:
[%]: ............60............20............5030...80.100.....20............40.....................50....40.......6010......70.
.....80......100...40.........100..............60..........30.
...70....................50.80.70................30..........60.60.50....................6020.......sampling algorithm progress:
[%]: ...........30..60....90.....90.......80.....70...........examining piece 47408087..47448275 (40189 bp)
....................40.....................viterbi algorithm progress:
[%]: .......80100...70..
...60..50.70...examining piece 2183204..2223392 (40189 bp)
examining piece 8787393..8870642 (83250 bp)
.......90.40......30...70........viterbi algorithm progress:
[%]: ..............90..60..............80..........viterbi algorithm progress:
[%]: ....40.....50.....90...80100.......
..80....70........100.100....10............
..50....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
..........
40.........80......80.
........sampling algorithm progress:
[%]: ................90.....60.........examining piece 14001068..14041247 (40180 bp)
8010..............sampling algorithm progress:
[%]: .....70........viterbi algorithm progress:
[%]: ....50........sampling algorithm progress:
[%]: ...20..................................60..30100......6050..90..
.........10....examining piece 29053021..29093158 (40138 bp)
......viterbi algorithm progress:
[%]: .20.4090.........70............10............9050......................10.....10...................60............examining piece 59834133..59890205 (56073 bp)
................10..........viterbi algorithm progress:
[%]: 100.100...70....
......70..
.20..................8080...60.........10........60..20.........90..........100............30.20..10
100100....
.......Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
.....30....examining piece 20642..41140 (20499 bp)
.viterbi algorithm progress:
[%]: .......................10.20.................2090...80......Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
20..........Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
...........10.7040......
30...30.........examining piece 42134611..42184240 (49630 bp)
........80.30..................40examining piece 2528669..2569400 (40732 bp)
...examining piece 30350898..30391065 (40168 bp)
viterbi algorithm progress:
[%]: .............70..10070...viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: ..40.....
....70.....50.50..30....90.....................................60.......examining piece 23710646..23750897 (40252 bp)
......viterbi algorithm progress:
[%]: ........1090........40...10......70.80....40..............................10........80...60.40..........100.............
......50...20........40sampling algorithm progress:
[%]: 90................................50..20........100.....50.100....30..80..
.......90..70..50...20..90........sampling algorithm progress:
[%]: .......20..............20..............10.10........50..........20...30.........20...3080........60.60.......examining piece 25799735..25839950 (40216 bp)
..80viterbi algorithm progress:
[%]: .......60.30....................
......................40...40..............10...................50.....................20..30..........60.60.....90...50...60....20..90........70..70............sampling algorithm progress:
[%]: .............examining piece 18234233..18274412 (40180 bp)
.....viterbi algorithm progress:
[%]: .......80.................70100..70...30..30.............90...................10................100.30.
.
......60.....10.....40........100.............7080........
...80..20................90............80....70.....20....50............30...sampling algorithm progress:
[%]: ..........40.80.......90...30..100.....70sampling algorithm progress:
[%]: .............................40.....Warning: Block unknown_A is not significant enough, removed from profile.
..Warning: Block unknown_G is not significant enough, removed from profile.
.9080.......90.............40..3060
30...40...10..................40....90.........................10....80....50...........40..............................50.....70...502040.examining piece 68296305..68338969 (42665 bp)
.......100.............90....
...............sampling algorithm progress:
[%]: viterbi algorithm progress:
[%]: ......90......20.................50.........90...........................30...100506080.......60.60........100.............10..........
.
..100.....60......30......................
............90...sampling algorithm progress:
[%]: .100.70...40..60..100...
100...sampling algorithm progress:
[%]: 20.70.50..40.....
......Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_G is not significant enough, removed from profile.
..Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
..Warning: Block unknown_AK is not significant enough, removed from profile.
Warning: Block unknown_AO is not significant enough, removed from profile.
....
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
examining piece 1..18105 (18105 bp)
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
.Warning: Block unknown_Y is not significant enough, removed from profile.
.Warning: Block unknown_AK is not significant enough, removed from profile.
Warning: Block unknown_AO is not significant enough, removed from profile.
viterbi algorithm progress:
[%]: .......70..90...40...70...........Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
..Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
.Warning: Block unknown_S is not significant enough, removed from profile.
...sampling algorithm progress:
[%]: Warning: Block unknown_AH is not significant enough, removed from profile.
Warning: Block unknown_AK is not significant enough, removed from profile.
.............50examining piece 1..14848 (14848 bp)
...viterbi algorithm progress:
[%]: .........30...8070........................sampling algorithm progress:
[%]: .....examining piece 48719930..48778879 (58950 bp)
..10.........80.................50..100..80...10.....80...................10..10.viterbi algorithm progress:
[%]: ..60....40............100.....10..80..........80...................20
10.............90........90......90..
....60.........50.......10.......70.20....20.......100....90.........sampling algorithm progress:
[%]: ......90.....................20..
.............20..................6030..20...........30..70...90.....100...80........10..100....30.......
..........sampling algorithm progress:
[%]: ....10060.........

.......100................70.....40..
.................20.sampling algorithm progress:
[%]: .....sampling algorithm progress:
[%]: .......90.80....2040..30.........sampling algorithm progress:
[%]: 40..............30..100..sampling algorithm progress:
[%]: ........50.....
......80.30....30.............................................100...10....
........10.....10.....9050........60........10.........90...40.......................10......20.....50.............40......40.........50......examining piece 14133122..14180571 (47450 bp)
......7020....100100....60..40.
....
...20...........30...viterbi algorithm progress:
[%]: .............Warning: Block unknown_B is not significant enough, removed from profile.
.60....100...examining piece 3278..38445 (35168 bp)
.....viterbi algorithm progress:
[%]: ..................20.80.............................40..30.......70...70..50..20......50....60.....3070..........50.....examining piece 26158503..26203670 (45168 bp)
...90...........50...5010.................80examining piece 46633248..46682072 (48825 bp)
..........................30..Warning: Block unknown_E is not significant enough, removed from profile.
.....10.....80.viterbi algorithm progress:
[%]: ....40..100....
..........viterbi algorithm progress:
[%]: ....60...90..............40.................................examining piece 2074832..2128287 (53456 bp)
......viterbi algorithm progress:
[%]: ....60........
.100..100....
70709050.....20..30..60..6060.Warning: Block unknown_E is not significant enough, removed from profile.
40.Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
....20.examining piece 1..26957 (26957 bp)
..viterbi algorithm progress:
[%]: .....................50.....................sampling algorithm progress:
[%]: ........80...............100..10.10.......
...60.............................50....
.......9070......Warning: Block unknown_L is not significant enough, removed from profile.
....30...60.10..30...............70...........sampling algorithm progress:
[%]: ........40.....10....100.70.
10.........70........7080.........10...........60examining piece 44211258..44253049 (41792 bp)
.........80.....70............40...........20......viterbi algorithm progress:
[%]: ......80.80................20..40.20.....80............10.....................50..70......80.......20.....examining piece 55257383..55297829 (40447 bp)
...viterbi algorithm progress:
[%]: ..............90..........10......................50...........30...90...........90...3080..............80....90..80..90100..........
.20.......10.30................examining piece 17984750..18027147 (42398 bp)
50.viterbi algorithm progress:
[%]: ...............2090....60................3040.................100...........
.......90.100............60....
.100.......9010.....
..........40...Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
..30.......examining piece 1..21010 (21010 bp)
viterbi algorithm progress:
[%]: .50...90......40.20.....Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.Warning: Block unknown_W is not significant enough, removed from profile.
...30..........100..100....90.Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
....100.
........10......70...........60.........
..examining piece 1..18125 (18125 bp)
viterbi algorithm progress:
[%]: ..examining piece 9965992..10006285 (40294 bp)
.......20...examining piece 15679265..15721039 (41775 bp)
......60..............70.viterbi algorithm progress:
[%]: .....30..40...20.....100..viterbi algorithm progress:
[%]: ....40..............10.50....30..........Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
........40...sampling algorithm progress:
[%]: ..........50.
...30.70....80....20..........30..........................50...40......100....10....40.............30.40...sampling algorithm progress:
[%]: ....examining piece 36064484..36108665 (44182 bp)
..............
.......80.............60........20...viterbi algorithm progress:
[%]: .......................40........9050.....40..50..50...60........10.............50
.30.....sampling algorithm progress:
[%]: ...70..........90.50...............10....................10060......sampling algorithm progress:
[%]: ..................40..........60..20.........10........
.100...70..60100.....
.7060...
.......50.............50......................50..............30.20..........70...................60.20....70............80....10.........80.............70.403080...60..sampling algorithm progress:
[%]: .....70.......................80.............60...70..................................9080..50.40...1090......80.............................30............examining piece 217074..258894 (41821 bp)
20..viterbi algorithm progress:
[%]: ..........90............80.50............60....20..........examining piece 26848286..26911027 (62742 bp)
.80.100.............
....100.......100....
..
...9010..90.70..viterbi algorithm progress:
[%]: ....90.....60........sampling algorithm progress:
[%]: ...70.....30.........10..............................30.......Warning: Block unknown_O is not significant enough, removed from profile.
.20.......100.70....10............80...40..........1004070...examining piece 33477449..33517880 (40432 bp)
..80..viterbi algorithm progress:
[%]: ...........................10.....
..20..80......3010.....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
......5010.....90.............................60.......8040.100.30sampling algorithm progress:
[%]: ..........90.......10......40..90........examining piece 46914377..46967451 (53075 bp)
60.....100
......
..viterbi algorithm progress:
[%]: .10......100......20examining piece 1..14488 (14488 bp)
..viterbi algorithm progress:
[%]: ............40.............100..
.....
.20.....................70
..50.....................50.....30...5010.5020..sampling algorithm progress:
[%]: ...................sampling algorithm progress:
[%]: .........10...............20....40...........80....30.............60.10....90....30................Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
.....50.....60...............10..40......sampling algorithm progress:
[%]: .90.20..............20............100.....60.90...........70.50..................examining piece 27108818..27157694 (48877 bp)
..30.........60.......
................1070.......60...........40...20....20.40.viterbi algorithm progress:
[%]: ...100..70............
80..............80...........70.............50....2030.examining piece 1..10185 (10185 bp)
.viterbi algorithm progress:
[%]: ........................................sampling algorithm progress:
[%]: .90...........40....10....80.....609030.............................10........20.60...30......100.......70..
...........80.3050...70.........examining piece 1..10185 (10185 bp)
.viterbi algorithm progress:
[%]: ...........10........100..40..90..........
...........10......100..............examining piece 1..10185 (10185 bp)
.viterbi algorithm progress:
[%]: ..50..80......2040..40..............................30....60......30.............10............
.20.............90....7040.100.............100........20............50.........
.....50.......80.......90.30....100.....50....
.....20......80.60......sampling algorithm progress:
[%]: ..40...
....90.30............................70..........50...60.10.....60..........100..........40....80...
.....sampling algorithm progress:
[%]: .....6020...........sampling algorithm progress:
[%]: ...........................90.......60....70..40.....30.........10...................70...........100.........4080.
.........20........sampling algorithm progress:
[%]: ..................10......100........50.......30.90.......50......sampling algorithm progress:
[%]: .10.
..90................80........60..............7040.....100..20.................
.................7050.sampling algorithm progress:
[%]: 30..............30..........20..........40......70......6080.6090....10..........40..sampling algorithm progress:
[%]: .........10..60.examining piece 60475363..60523730 (48368 bp)
........viterbi algorithm progress:
[%]: ...................9070..........20.50.........................80...............100.......
.......80.....30.100....60.....
.100.30.....1070....................90...
.......70.40.....................20............100....
..examining piece 1..16992 (16992 bp)
.....viterbi algorithm progress:
[%]: ..5080......examining piece 1..15043 (15043 bp)
.viterbi algorithm progress:
[%]: ........10...............20...........20...1090..60...80...90........1050.........40........................20......8070.......20..100...
......................30.............30..80.....30.30...........................90...........10090..40.......402050..
..20..............Warning: Block unknown_F is not significant enough, removed from profile.
.............100....
...50......50..40........40........40........100....60
60.............90.................60.70........examining piece 37805978..37850071 (44094 bp)
70.50..............90.....80............30....5080..examining piece 63714223..63754414 (40192 bp)
.......viterbi algorithm progress:
[%]: ..50.........90Warning: Block unknown_J is not significant enough, removed from profile.
.....viterbi algorithm progress:
[%]: ...........60..70.90.............100.......Warning: Block unknown_I is not significant enough, removed from profile.
.
.............100.sampling algorithm progress:
[%]: .60...examining piece 21795375..21835626 (40252 bp)
.....viterbi algorithm progress:
[%]: ..70
.......70........10.......70..........sampling algorithm progress:
[%]: ...80.examining piece 34779066..34832357 (53292 bp)
..20...viterbi algorithm progress:
[%]: .......................10.30....................40.....80...402020.....examining piece 71540275..71584643 (44369 bp)
........70.........10.50......30..............examining piece 22125188..22167399 (42212 bp)
...viterbi algorithm progress:
[%]: .....60...viterbi algorithm progress:
[%]: ....100....90.40..................70........90.....50....60....50...
......80.......10............60.......10..90........80.....................70..100..
..........100..100....Warning: Block unknown_A is not significant enough, removed from profile.
.50

.80examining piece 1..14560 (14560 bp)
.viterbi algorithm progress:
[%]: .............Warning: Block unknown_A is not significant enough, removed from profile.
........examining piece 1..10051 (10051 bp)
..viterbi algorithm progress:
[%]: ....10.....20.90........10.10.........................2020......100..20.
............30....sampling algorithm progress:
[%]: .90..examining piece 1..10604 (10604 bp)
.30...viterbi algorithm progress:
[%]: .........50.......40......................10..40..........50.....................20..........60..50.......30...........1030...............70......20......60........40...100.............
..........80.....50....70...........................20examining piece 1..31659 (31659 bp)
..6090viterbi algorithm progress:
[%]: .....................80..................50.1007040..............10
..................80examining piece 30618998..30663746 (44749 bp)
sampling algorithm progress:
[%]: .....90....60............30.....10...........30.....20...80.20....90.....................30....100............50....40...viterbi algorithm progress:
[%]: ..3060....
...100.....50.......
...30......6040.........sampling algorithm progress:
[%]: .........sampling algorithm progress:
[%]: ....70.........................30...10...80.................10.40........90.........20..60.......................100..
......20..503060........10.......................4030.20................50......4050.........40....................60............50.60................70..................60......80........6080......Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.........20..907070.........................100..
....70..80....70.............70...90........examining piece 23526863..23573090 (46228 bp)
....40..viterbi algorithm progress:
[%]: .........100
.....30..........80.....70....70.30.........80.......50..70....80.40...10..90..................Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
........80...........Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
........90.100.....
..........3040.90.30...........20........examining piece 25611487..25653777 (42291 bp)
...examining piece 12305514..12346083 (40570 bp)
..viterbi algorithm progress:
[%]: ..90...100.......
.......40viterbi algorithm progress:
[%]: .................10.......50..sampling algorithm progress:
[%]: 20...100.......10.........
....Warning: Block unknown_B is not significant enough, removed from profile.
...50.10......30.....50.........6090..20...sampling algorithm progress:
[%]: ........80...20.....60........examining piece 36938581..36979606 (41026 bp)
10...viterbi algorithm progress:
[%]: ..30..........................50.10.............40.....................70..............50..10...20...30........................60..........................30.........70..60...4080.20......................80.......40..70...........40....90............................50.100.100..
...30100.90.......................
...60........90..........80............10070....50.40..Warning: Block unknown_B is not significant enough, removed from profile.

.50..............sampling algorithm progress:
[%]: ...80...sampling algorithm progress:
[%]: ...........examining piece 10628114..10669103 (40990 bp)
....viterbi algorithm progress:
[%]: ....................
...90..70...........100...80..........1040....60...sampling algorithm progress:
[%]: .100..10.
.10.....50.................60..60....................20.
.........20.....50...30............1020.............30............................100.......Warning: Block unknown_B is not significant enough, removed from profile.
......30..70......6060.4070...30...2060....
..........sampling algorithm progress:
[%]: .....................50..40examining piece 56355463..56396245 (40783 bp)
..80........viterbi algorithm progress:
[%]: ..............................40........4030.....60..70.................sampling algorithm progress:
[%]: ...70.......................50........80.10.50.70...........................7040..20....5010........70.........20.....80...........60...........60....................80.10......208050.......90.60...................2060...............................70...100....
.....30.........60......90...60.......90................................80..4090.....90.70........3080....................70................examining piece 48106674..48158959 (52286 bp)
.....90.50.70.....90.............viterbi algorithm progress:
[%]: ........................................80.70.60.............100.....
.40.........Warning: Block unknown_P is not significant enough, removed from profile.
.100.examining piece 1..10771 (10771 bp)
viterbi algorithm progress:
[%]: .....10............
8080...100......100..70.10.......70.....90.........2080...
.........
.100.........30..........20.............40.80.50..90...90...........sampling algorithm progress:
[%]: ....50.........100...
..sampling algorithm progress:
[%]: .....
sampling algorithm progress:
[%]: ............60Warning: Block unknown_P is not significant enough, removed from profile.
.......examining piece 1..10771 (10771 bp)
viterbi algorithm progress:
[%]: ................80..10.........9070........................10...10.......30......80.....10........20.........90.............20......10.......8030.90........................60.....20..100..90.....40.....
..100.......20......
........30Warning: Block unknown_P is not significant enough, removed from profile.
sampling algorithm progress:
[%]: ...50examining piece 1..10771 (10771 bp)
viterbi algorithm progress:
[%]: .........70..sampling algorithm progress:
[%]: ................................30........60....10...10............20.........................20....40..70.....20.........10...................30.......40...40...80...30..................30..100...........40......100....5040..90...............80...70.30..............50.....
...20.50.....50..100....30.............
....90....
....60...........60...sampling algorithm progress:
[%]: ....80.60....30....sampling algorithm progress:
[%]: ...............60.70..40........10............30......70...................80.........20.......70..40...................80...90....40..70...30.........................100........100....
.......4040.....90......80...sampling algorithm progress:
[%]: .......80......50.5050..........80...........10..100...............60...............
...50....50
....Warning: Block unknown_K is not significant enough, removed from profile.
....90.....70.sampling algorithm progress:
[%]: .............90............................1080.90.10..............examining piece 1532269..1596276 (64008 bp)
....................100....90..20
..60.....100...........
....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
..viterbi algorithm progress:
[%]: ....examining piece 1..14118 (14118 bp).
.viterbi algorithm progress:
[%]: ..100..
30...60.90....60.90...20..............sampling algorithm progress:
[%]: ...4010........20...................10070......50.........90.....20.........20...................6060........10......30...
..............70...100......70......80...40...........Warning: Block unknown_L is not significant enough, removed from profile.
..80...30.............30.10..20......100.....70.90.50.............
.................100.....
..90.examining piece 34821819..34861932 (40114 bp)
..........examining piece 46858617..46899225 (40609 bp)
..60sampling algorithm progress:
[%]: .........30...80......viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: .....40...................................40......100.70.......
...10.........40.40............
.......10......70....80.............50........9020..........80...50...............Warning: Block unknown_Q is not significant enough, removed from profile.
.....90.1050...Warning: Block unknown_Q is not significant enough, removed from profile.
.............30....sampling algorithm progress:
[%]: ........examining piece 26835910..26876125 (40216 bp)
...20...........50......60......examining piece 42116769..42156996 (40228 bp)
100..viterbi algorithm progress:
[%]: ..60..20...100viterbi algorithm progress:
[%]: ..........
...
..........40................examining piece 55778748..55818963 (40216 bp)
...viterbi algorithm progress:
[%]: ...10............sampling algorithm progress:
[%]: 70.......1060............................10..............20..........10...20...20..10.70.........................30..80........5060...........90.......40......100..............30.Warning: Block unknown_A is not significant enough, removed from profile.
..Warning: Block unknown_F is not significant enough, removed from profile.
....50...............100..50.......20....60...........90.............examining piece 20694020..20736010 (41991 bp)
......viterbi algorithm progress:
[%]: .208070...........70...40.20.............80..........30........................100.90.....100.
.....30...
...
......50.100..
..70.....10..60.30..examining piece 1..10000 (10000 bp)
viterbi algorithm progress:
[%]: .................90........10.........30............20..................
...30..........60..30.40....100....40...............80.20.
.......50................100...60.40..70.
............4070....80.......examining piece 1..10000 (10000 bp)
viterbi algorithm progress:
[%]: .......examining piece 31079553..31119720 (40168 bp)
..80...............1040...viterbi algorithm progress:
[%]: ....60.....sampling algorithm progress:
[%]: .........3080..90.20.........................30......sampling algorithm progress:
[%]: ..100...40............40.
.......10.........40...sampling algorithm progress:
[%]: ....50.......................10....sampling algorithm progress:
[%]: .....sampling algorithm progress:
[%]: ..............6020.....................80.5030...........20...........40.40....70..............50...10...50........90..30..50.......60....80.....................70.............90.......10....80...50....90..30.30.......90.........................100.
....90......100examining piece 1..10810 (10810 bp)
.10viterbi algorithm progress:
[%]: .............
.....20......10...............sampling algorithm progress:
[%]: ...................20...10........40..50..........50.......20..30............................30....40.......100.............90...40..........10......
50.90...50................50..80...60..6060...30.....60..60......2060.70.........20................80...........70..60..............90........................100.
.80..............6060................90...........100.....40.........70.......100....
......70.......sampling algorithm progress:
[%]: 30.70...................10.examining piece 15317662..15357913 (40252 bp)
.....viterbi algorithm progress:
[%]: ..
.Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
.Warning: Block unknown_AB is not significant enough, removed from profile.
Warning: Block unknown_AJ is not significant enough, removed from profile.
Warning: Block unknown_AN is not significant enough, removed from profile.
......2030..............70....50.30........20.100..........40..........70...examining piece 1334800..1420868 (86069 bp)
....1050...........70......viterbi algorithm progress:
[%]: .
.7060....................7080....................80......sampling algorithm progress:
[%]: ........30....4090........60.............100...
.80...20........sampling algorithm progress:
[%]: .........................40..........................80...30.70.80.........9010.50.............30......70..................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
..9080..............80.......40.....80.....10....70....50.........................examining piece 33231759..33278305 (46547 bp)
..20.60viterbi algorithm progress:
[%]: ..........10090.100...........10.......9080........
....10090......50.......
..............10....................40sampling algorithm progress:
[%]: .......20..60........7030.100......
..........90......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
..examining piece 1..14909 (14909 bp)
.viterbi algorithm progress:
[%]: .....90....100.....60....20.....
...10..100........Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
.............
........20......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
...examining piece 1..30230 (30230 bp)
.....viterbi algorithm progress:
[%]: ..........80........examining piece 25435544..25486147 (50604 bp)
....viterbi algorithm progress:
[%]: ..30.10..40........70sampling algorithm progress:
[%]: ..30..........30.50....70.........10.............80..........40.........................40....10....................90....20................50....50.1010010020..........
...80.......20.4020.......40.80........
...........
60.....90...........sampling algorithm progress:
[%]: ..100............
........60.......30...............70........60.....30..........90..........sampling algorithm progress:
[%]: ..20.........30.sampling algorithm progress:
[%]: .50....40.....90.....80...............................examining piece 31878306..31931310 (53005 bp)
.........50..1010.......1080...........viterbi algorithm progress:
[%]: .....50........................7090.............................20.......20......70...........100..90.......100.601030.....40.8090....60.
..
...................30.100..30....................
.......30....20......40...70.20....80...........sampling algorithm progress:
[%]: 100..40..40..........sampling algorithm progress:
[%]: .........
...........................50.......10.Warning: Block unknown_M is not significant enough, removed from profile.
60............50..sampling algorithm progress:
[%]: .80.......10...50.....70.......100.20............40........80.............100...............examining piece 23292874..23338877 (46004 bp)
...30.viterbi algorithm progress:
[%]: ......60.......9020.....30.......50..6090..............10..40............................................50..........
...50..70.....30......10...............60.70.sampling algorithm progress:
[%]: .100.60...........
..........................2040........70.80..........80..40...100....................
.....8080........7040..............40...
..examining piece 1..25685 (25685 bp)
...viterbi algorithm progress:
[%]: .....60.60...90..50......90....90..........30.....40............1010....100..
........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.sampling algorithm progress:
[%]: ..90................70.....20.....................10060...20......
.........30.....................100.......examining piece 33177000..33221284 (44285 bp)
90.40
..........40......70......Warning: Block unknown_M is not significant enough, removed from profile.
..5070..examining piece 1..17609 (17609 bp)
.viterbi algorithm progress:
[%]: .................20..viterbi algorithm progress:
[%]: ....50.........................................50....6010...80.....10.Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
............100........80..Warning: Block unknown_I is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
.80......70........70....
.......20................100.90.80.30.....50..50....
6030..80............examining piece 55236175..55299288 (63114 bp)
.examining piece 32839734..32921722 (81989 bp)
...60....30...........viterbi algorithm progress:
[%]: ...........10090..
.................................40....20viterbi algorithm progress:
[%]: ....70..10050....90.
..............Warning: Block unknown_F is not significant enough, removed from profile.
............40...sampling algorithm progress:
[%]: .........50...50......................10100.....examining piece 5371220..5417749 (46530 bp)
..90......80..10.70...........examining piece 61151979..61192224 (40246 bp)
20..............90...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.Warning: Block unknown_N is not significant enough, removed from profile.
..........viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: ...90.60..30......50100......40.30..........
.....60...40.....90..80............10examining piece 17344389..17413260 (68872 bp)
.........viterbi algorithm progress:
[%]: ...50.......................70...............60.....................1008020....
70..60....60..Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.......100.....80...80..10.........30..40...................90..examining piece 1634206..1676658 (42453 bp)
......viterbi algorithm progress:
[%]: ...
................
..100..
..90.....sampling algorithm progress:
[%]: ....70..70..10.......Warning: Block unknown_F is not significant enough, removed from profile.
...90........100.....50sampling algorithm progress:
[%]: ....30...10050.........
........
...........examining piece 56566188..56606295 (40108 bp)
..viterbi algorithm progress:
[%]: ...90..............sampling algorithm progress:
[%]: ...80.........10.......80.........10...........10010.........10.examining piece 56951285..57006929 (55645 bp)
..
..................sampling algorithm progress:
[%]: ..............40.10...60.........viterbi algorithm progress:
[%]: ......20.........20.......90..................60....................20...1030.20......90..502020................30.........Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
........90......40....................100........40..
..20..100..70.....60.70.50..60100........examining piece 42681302..42728236 (46935 bp)
40.............30....viterbi algorithm progress:
[%]: .......3030.......60............
.........30............20....20..........70......50............................80....8040..40......40.
...........40.100...........sampling algorithm progress:
[%]: ..90....70....sampling algorithm progress:
[%]: .......
.30.60..100......50..10............100......
.........10.........10....50......90......70...50......sampling algorithm progress:
[%]: 60.50....................20.10.....70.........
........................80sampling algorithm progress:
[%]: .......70........30..60...........10........100...........
..60.........................40.80.......60.20..80...........10.........................50..7070......20.............90..................70......60...........................30.20....30..100......
....80.30..9070...70..80............10..............40...............8080..................30.........40...........40.........90.........90.....100...................30..
.......100.
50.....9040.......2090............50........sampling algorithm progress:
[%]: ..100........
..80..............60.........50.10............100........
................20.......60.....50...90.......70..30.....60.....................4090..........30.80.......40....50.....70....80.......70.................60.........20........80......90......50....70....90...................80.80......80.....................100......100...
.90.100
........10........sampling algorithm progress:
[%]: .40..50.......100.
.90.
......90................100100....60.....10.......100...
...

.........sampling algorithm progress:
[%]: ...100..40.
...70............20..........10....................80....50..50sampling algorithm progress:
[%]: 20...10030..........sampling algorithm progress:
[%]: .............................30............10........6090....40.......60.50.40...10.90.....................60.....20..............
50.6050....70...................100...sampling algorithm progress:
[%]: 20..........60..
.30................60..........80..sampling algorithm progress:
[%]: ....70.....60.......90....40.30....................10...80..70.......................30.10..50.....................40...90.90..........80....................2060...100.
.........20............50...............90........70.....................100...3030.....60.
.100...70
.....70.80.........................sampling algorithm progress:
[%]: .40.......70...90...40....................................10..50100..
.....80.20.......70....50.............20..........60.......90...............30..80.......6080.........70..100....
.........40.................7080.....100.....50..................
.....40.90...6080.20..........................100.70.
..........90......9080..............sampling algorithm progress:
[%]: ....50.....80........90100.....
.....60................100...
....7070..10.................80.....90..................20..100.90......80..
..............100.
.30.....sampling algorithm progress:
[%]: .90....sampling algorithm progress:
[%]: ...........30................9010..1040............................20..20...............50..........30........40.30.................40...........60.........40..50................100...........5060...70
........100.....30.60....70.
.......60.sampling algorithm progress:
[%]: ............80...80....................70...........90...10........sampling algorithm progress:
[%]: ..90.............80...100...
...............10............20.70.100.90...
...40...........20..................100...
.50.....30..30......................40.60......100..40..........50.............80.70....5060.............
........70.........60.......sampling algorithm progress:
[%]: .80.80..........50..............10...7090........................20....100.
.......90.80...30.90..................40..100..90.............50................100
60100....
.......70....sampling algorithm progress:
[%]: 
.........sampling algorithm progress:
[%]: .80..........10....100.......90.........
......1010020
.........sampling algorithm progress:
[%]: .........30...20............40..............50..30...............60.10.....60.........7040................80...............50....90................100.
20..6070.................70........30.......80.......80..........90....40...........100.
....90...50..............60......100.
..70.sampling algorithm progress:
[%]: .............10..........8020.............30...........4090............50............60100..
......70........80........90........100