pgen_bsseq_all_R1_bismark_bt2.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.19.0
Bismark result file: single-end (SAM format)
Output specified: strand-specific (default)


Processed 4114646 lines in total
Total number of methylation call strings processed: 4114646

Final Cytosine Methylation Report
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Total number of C's analysed:	63918994

Total methylated C's in CpG context:	2396786
Total methylated C's in CHG context:	336167
Total methylated C's in CHH context:	632513

Total C to T conversions in CpG context:	6613085
Total C to T conversions in CHG context:	12733884
Total C to T conversions in CHH context:	41206559

C methylated in CpG context:	26.6%
C methylated in CHG context:	2.6%
C methylated in CHH context:	1.5%