File Total Reads Aligned Reads Unaligned Reads Ambiguously Aligned Reads No Genomic Sequence Duplicate Reads (removed) Unique Reads (remaining) Total Cs Methylated CpGs Unmethylated CpGs Methylated CpHs Unmethylated CpHs Methylated CHHs Unmethylated CHHs pgen_bsseq_all_R1_bismark_bt2.bam 5000000 2678580 1444259 858167 18994 382560 2296020 35695016 1312175 3757759 188975 7166539 344480 22925088