pgen_bsseq_all_R1_bismark_bt2.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.19.0
Bismark result file: single-end (SAM format)
Output specified: strand-specific (default)


Processed 245908 lines in total
Total number of methylation call strings processed: 245908

Final Cytosine Methylation Report
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Total number of C's analysed:	3845358

Total methylated C's in CpG context:	137920
Total methylated C's in CHG context:	20346
Total methylated C's in CHH context:	36904

Total C to T conversions in CpG context:	415415
Total C to T conversions in CHG context:	778007
Total C to T conversions in CHH context:	2456766

C methylated in CpG context:	24.9%
C methylated in CHG context:	2.5%
C methylated in CHH context:	1.5%