pgen_bsseq_all_R1_bismark_bt2.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.19.0
Bismark result file: single-end (SAM format)
Output specified: strand-specific (default)


Processed 485505 lines in total
Total number of methylation call strings processed: 485505

Final Cytosine Methylation Report
=================================
Total number of C's analysed:	7580752

Total methylated C's in CpG context:	274136
Total methylated C's in CHG context:	40098
Total methylated C's in CHH context:	72279

Total C to T conversions in CpG context:	812291
Total C to T conversions in CHG context:	1530738
Total C to T conversions in CHH context:	4851210

C methylated in CpG context:	25.2%
C methylated in CHG context:	2.6%
C methylated in CHH context:	1.5%