File Total Reads Aligned Reads Unaligned Reads Ambiguously Aligned Reads No Genomic Sequence Duplicate Reads (removed) Unique Reads (remaining) Total Cs Methylated CpGs Unmethylated CpGs Methylated CpHs Unmethylated CpHs Methylated CHHs Unmethylated CHHs pgen_bsseq_all_R1_bismark_bt2.bam 1000000 535080 289718 171500 3702 49575 485505 7580752 274136 812291 40098 1530738 72279 4851210