File Total Reads Aligned Reads Unaligned Reads Ambiguously Aligned Reads No Genomic Sequence Duplicate Reads (removed) Unique Reads (remaining) Total Cs Methylated CpGs Unmethylated CpGs Methylated CpHs Unmethylated CpHs Methylated CHHs Unmethylated CHHs pgen_bsseq_all_R1_bismark_bt2.bam 100000 53669 28741 17199 391 2915 50754 798155 27770 87693 4199 161579 7314 509600