olur_bsseq_all_R1_bismark_bt2.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 53393 lines in total Total number of methylation call strings processed: 53393 Final Cytosine Methylation Report ================================= Total number of C's analysed: 470537 Total methylated C's in CpG context: 23434 Total methylated C's in CHG context: 2788 Total methylated C's in CHH context: 5398 Total C to T conversions in CpG context: 54429 Total C to T conversions in CHG context: 95431 Total C to T conversions in CHH context: 289057 C methylated in CpG context: 30.1% C methylated in CHG context: 2.8% C methylated in CHH context: 1.8%