Total number of alignments analysed in cvir_bsseq_all_pe_R1_bismark_bt2_pe.bam:	1607302
Total number duplicated alignments removed:	31233 (1.94%)
Duplicated alignments were found at:	26627 different position(s)

Total count of deduplicated leftover sequences: 1576069 (98.06% of total)