File Total Reads Aligned Reads Unaligned Reads Ambiguously Aligned Reads No Genomic Sequence Duplicate Reads (removed) Unique Reads (remaining) Total Cs Methylated CpGs Unmethylated CpGs Methylated CpHs Unmethylated CpHs Methylated CHHs Unmethylated CHHs cgig_bsseq_all_R1_bismark_bt2.bam 10000000 5420771 2204882 2374150 197 593652 4827119 40824903 1551309 4602456 258149 8332460 504513 25576016