File Total Reads Aligned Reads Unaligned Reads Ambiguously Aligned Reads No Genomic Sequence Duplicate Reads (removed) Unique Reads (remaining) Total Cs Methylated CpGs Unmethylated CpGs Methylated CpHs Unmethylated CpHs Methylated CHHs Unmethylated CHHs cgig_bsseq_all_R1_bismark_bt2.bam 100000 55000 20470 24529 1 660 54340 458496 17564 52046 2783 94186 5409 286508