File Total Reads Aligned Reads Unaligned Reads Ambiguously Aligned Reads No Genomic Sequence Duplicate Reads (removed) Unique Reads (remaining) Total Cs Methylated CpGs Unmethylated CpGs Methylated CpHs Unmethylated CpHs Methylated CHHs Unmethylated CHHs cgig_bsseq_pe_all_R1_bismark_bt2_pe.bam 2000000 975162 1365034 147366 19 53601 921561 6366907 91154 661830 3123 1036674 11232 4562894