lowQualScore : 1
lowQualScore : 2 7 4
lowQualScore : . . .
lowQualScore : 2 6 8
consensus : NTCATTAAA-ATCATATCCTCAAGAACGCTTCGCTATGGGATCTGACGAC
Reference ( gi|3 ) : GTCATTAAA-ATCATATCCACAAGAACACTTCGCTATGGGATCTGACGAC
gi|6 : TCATTAAA-ATCATATCTTCAAGAACACTTTGCCATGGGATCTGACGA
gi|8 : cTCATTAAA-ATCATATCCTCCAGAACGCTTCACTATGGGATCTGATGA
gi|4 : cTCATTAAA-ATCATATCCTCAAGAACCCTTTGCTATAGAATCTGACAAC
gi|5 : cTCATTAAA-GTCATATCCTCAAGAACGCTTGGCTATGGGATCGGACAAC
gi|2 : cTCATTTAA-ATCATACACTCAAGAATGCTTTGCTATGGGATCTGACGAC
gi|15 : cTCATTAAA-ATCACATCCTCAACAACGCTTCGCTATGa
gi|19 : caaacTCATTAAA-AT-------------ATGCTTCGCTATGGGATCTGACGACatgac
gi|13 : atcCATTAAA-ATCATGTCCTAAAGAATGCTTCGCTATGAGATCTGACGgg
gi|12 : CATTAAA-ATCATGTCCTAAAGAATGCTTCGCTATGAGATCTGACGc
gi|7 : CATTAAA-ATCATGTCCTCAAGAATGCTTTGCTATGAGATCTGATGc
gi|11 : ATTAAA-ATCACATCCGCAAGAACACTTCACTATGGGATCTGACGAccg
gi|9 : ATTAAA-ATCCTATCC-CATAAACGCTTTGCCATGTGATCTGACGACt
gi|14 : ATTAAA-ATCATCTCCTCAAATACGCTTCGC-ATGGGATCTGAga
gi|1 : tctgTTAAA-ATTATATCCTCAAGAATGCTTCACTATGGGATCTGAa
gi|10 : tctggTTAAA-ATCACATTCTCAAGAACGCTTCGCGGTGGGATCTGAttacga
gi|17 : ttcTAAA-ATTATATCCTCAAGAATGTTTTGCTATGGGATCTGACGACtaa
gi|16 : TAAA-ATTATATCCTCAAGAATGTTTTGCTATGGGATCTGACGACg
gi|18 : AAATATAATATCCTCAAGAACGCTTCGCTATTAGATATGACGACg
Alignments
lowQualScore : 2
lowQualScore : .
lowQualScore : 1
consensus : NTCATTAAA-ATCATATCCTCAAGAACGCTTCGCTATGGGATCTGACGAC
Reference ( family-5825 ) : NTCATTAAA-ATCATATCCTCAAGAACGCTTCGCTATGGGATCTGACGAC
gi|1 : TTAAA-ATTATATCCTCAAGAATGCTTCACTATGGGATCTGA
gi|10 : tctggTTAAA-ATCACATTCTCAAGAACGCTTCGCGGTGGGATCTGAttacga
gi|11 : ttcATTAAA-ATCACATCCGCAAGAACACTTCACTATGGGATCTGACGAtaa
gi|12 : CATTAAA-ATCATGTCCTAAAGAATGCTTCGCTATGAGATCTGACGt
gi|13 : CATTAAA-ATCATGTCCTAAAGAATGCTTCGCTATGAGATCTGACGc
gi|14 : ATTAAA-ATCATCTCCTCAAATACGCTTCGC-ATGGGATCTGAc
gi|15 : tctgTCATTAAA-ATCACATCCTCAACAACGCTTCGCTATGa
gi|16 : caaacTAAA-ATTATATCCTCAAGAATGTTTTGCTATGGGATCTGACGACatgac
gi|17 : TAAA-ATTATATCCTCAAGAATGTTTTGCTATGGGATCTGACGACg
gi|18 : AAATATAATATCCTCAAGAACGCTTCGCTATTAGATATGACGACg
gi|19 : TCATTAAA-AT-------------ATGCTTCGCTATGGGATCTGACGACg
gi|2 : atcTCATTTAA-ATCATACACTCAAGAATGCTTTGCTATGGGATCTGACGACgg
gi|3 : cTCATTAAA-ATCATATCCACAAGAACACTTCGCTATGGGATCTGACGACa
gi|4 : gTCATTAAA-ATCATATCCTCAAGAACCCTTTGCTATAGAATCTGACAAC
gi|5 : cTCATTAAA-GTCATATCCTCAAGAACGCTTGGCTATGGGATCGGACAAC
gi|6 : cTCATTAAA-ATCATATCTTCAAGAACACTTTGCCATGGGATCTGACGA
gi|7 : cCATTAAA-ATCATGTCCTCAAGAATGCTTTGCTATGAGATCTGATG
gi|8 : TCATTAAA-ATCATATCCTCCAGAACGCTTCACTATGGGATCTGATGAccg
gi|9 : cATTAAA-ATCCTATCC-CATAAACGCTTTGCCATGTGATCTGACGAC
Alignments
lowQualScore : 2
lowQualScore : .
lowQualScore : 1
consensus : NTCATTAAA-ATCATATCCTCAAGAACGCTTCGCTATGGGATCTGACGAC
Reference ( family-5825 ) : NTCATTAAA-ATCATATCCTCAAGAACGCTTCGCTATGGGATCTGACGAC
gi|1 : TTAAA-ATTATATCCTCAAGAATGCTTCACTATGGGATCTGA
gi|10 : tctggTTAAA-ATCACATTCTCAAGAACGCTTCGCGGTGGGATCTGAttacga
gi|11 : ttcATTAAA-ATCACATCCGCAAGAACACTTCACTATGGGATCTGACGAtaa
gi|12 : CATTAAA-ATCATGTCCTAAAGAATGCTTCGCTATGAGATCTGACGt
gi|13 : CATTAAA-ATCATGTCCTAAAGAATGCTTCGCTATGAGATCTGACGc
gi|14 : ATTAAA-ATCATCTCCTCAAATACGCTTCGC-ATGGGATCTGAc
gi|15 : tctgTCATTAAA-ATCACATCCTCAACAACGCTTCGCTATGa
gi|16 : caaacTAAA-ATTATATCCTCAAGAATGTTTTGCTATGGGATCTGACGACatgac
gi|17 : TAAA-ATTATATCCTCAAGAATGTTTTGCTATGGGATCTGACGACg
gi|18 : AAATATAATATCCTCAAGAACGCTTCGCTATTAGATATGACGACg
gi|19 : TCATTAAA-AT-------------ATGCTTCGCTATGGGATCTGACGACg
gi|2 : atcTCATTTAA-ATCATACACTCAAGAATGCTTTGCTATGGGATCTGACGACgg
gi|3 : cTCATTAAA-ATCATATCCACAAGAACACTTCGCTATGGGATCTGACGACa
gi|4 : gTCATTAAA-ATCATATCCTCAAGAACCCTTTGCTATAGAATCTGACAAC
gi|5 : cTCATTAAA-GTCATATCCTCAAGAACGCTTGGCTATGGGATCGGACAAC
gi|6 : cTCATTAAA-ATCATATCTTCAAGAACACTTTGCCATGGGATCTGACGA
gi|7 : cCATTAAA-ATCATGTCCTCAAGAATGCTTTGCTATGAGATCTGATG
gi|8 : TCATTAAA-ATCATATCCTCCAGAACGCTTCACTATGGGATCTGATGAccg
gi|9 : cATTAAA-ATCCTATCC-CATAAACGCTTTGCCATGTGATCTGACGAC
blockSeqs : T
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqCons :
originalCons : NTCATTAAA-ATCATATCCTCAAGAACGCTTCGCTATGGGATCTGACGAC
finalCons : NTCATTAAA-ATCATATCCTCAAGAACGCTTCGCTATGGGATCTGACGAC
Alignments
lowQualScore : 2
lowQualScore : .
lowQualScore : 1
consensus : NTCATTAAA-ATCATATCCTCAAGAACGCTTCGCTATGGGATCTGACGAC
Reference ( family-5825 ) : NTCATTAAA-ATCATATCCTCAAGAACGCTTCGCTATGGGATCTGACGAC
gi|1 : TTAAA-ATTATATCCTCAAGAATGCTTCACTATGGGATCTGA
gi|10 : tctggTTAAA-ATCACATTCTCAAGAACGCTTCGCGGTGGGATCTGAttacga
gi|11 : ttcATTAAA-ATCACATCCGCAAGAACACTTCACTATGGGATCTGACGAtaa
gi|12 : CATTAAA-ATCATGTCCTAAAGAATGCTTCGCTATGAGATCTGACGt
gi|13 : CATTAAA-ATCATGTCCTAAAGAATGCTTCGCTATGAGATCTGACGc
gi|14 : ATTAAA-ATCATCTCCTCAAATACGCTTCGC-ATGGGATCTGAc
gi|15 : tctgTCATTAAA-ATCACATCCTCAACAACGCTTCGCTATGa
gi|16 : caaacTAAA-ATTATATCCTCAAGAATGTTTTGCTATGGGATCTGACGACatgac
gi|17 : TAAA-ATTATATCCTCAAGAATGTTTTGCTATGGGATCTGACGACg
gi|18 : AAATATAATATCCTCAAGAACGCTTCGCTATTAGATATGACGACg
gi|19 : TCATTAAA-AT-------------ATGCTTCGCTATGGGATCTGACGACg
gi|2 : atcTCATTTAA-ATCATACACTCAAGAATGCTTTGCTATGGGATCTGACGACgg
gi|3 : cTCATTAAA-ATCATATCCACAAGAACACTTCGCTATGGGATCTGACGACa
gi|4 : gTCATTAAA-ATCATATCCTCAAGAACCCTTTGCTATAGAATCTGACAAC
gi|5 : cTCATTAAA-GTCATATCCTCAAGAACGCTTGGCTATGGGATCGGACAAC
gi|6 : cTCATTAAA-ATCATATCTTCAAGAACACTTTGCCATGGGATCTGACGA
gi|7 : cCATTAAA-ATCATGTCCTCAAGAATGCTTTGCTATGAGATCTGATG
gi|8 : TCATTAAA-ATCATATCCTCCAGAACGCTTCACTATGGGATCTGATGAccg
gi|9 : cATTAAA-ATCCTATCC-CATAAACGCTTTGCCATGTGATCTGACGAC