lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 9999999999 111 11 1 1111111 1 11111111 1111111 5555555555555555555555555555555 777777777777777777777777777 2222222 111111 22 1 1 1 1111111 1 1 111111 11 1 1 1 1 1 1 1 111 1111 2222222222 1 1 333333333 1 4 1 1 1 1 1 111 1 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 444444444 111 111 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
lowQualScore : 9 1111111111 3 444 1 5 4 55 6 4 4444444 777 2 9999 66 33333333 4 4444444 777 66 0 7777777777777777777777777777777 66 9999 999999999999999999999999999 66 2 1 3333333 99 7 5 666666 44 5 2 1 1 5 8 5 6666666 5 3 1 5 99 3 999999 1 5 55 1 6 6 1 99 3 1 7 5 6 2 2 7 5 3 3 7 0 2 6 7 5 3 99 0 444 6 8 0 7777 5 55 0 8 2 3 99 9999999999 0 6 6 7 6 111111111 5 6 0 6 5 0 6 8 4 4 3 7 1 0 3 5 111 6 9 0 2 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 000000000 777 2 88 2 2 666 2 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666
lowQualScore : . .......... . ... . . . .. . . ....... ... . .... .. ........ . ....... ... .. . ............................... .. .... ........................... .. . . ....... .. . . ...... .. . . . . . . . ....... . . . . .. . ...... . . .. . . . . .. . . . . . . . . . . . . . . . . . . .. . ... . . . .... . .. . . . . .. .......... . . . . . ......... . . . . . . . . . . . . . . . . ... . . . . ................................................................................................................. ......... ... . .. . . ... . ..........................................................................................................
lowQualScore : 0 0000000000 2 000 2 0 4 66 7 4 4444444 888 2 4444 11 88888888 4 4444444 888 11 9 8888888888888888888888888888888 11 4444 444444444444444444444444444 99 6 4 0000000 77 3 7 444444 66 0 2 4 9 0 1 0 2222222 1 9 7 7 22 3 222222 0 0 77 7 7 7 7 22 5 0 0 0 0 8 5 3 0 5 5 7 7 5 7 8 0 5 22 2 000 2 0 8 0000 6 22 8 2 2 2 00 8888888888 6 0 0 0 0 000000000 0 0 0 0 0 0 0 0 8 8 2 0 4 8 8 0 666 0 8 6 5 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 000000000 555 2 00 0 0 333 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
consensus : AGAGAAATAATATTCTATG----NTTGAAATTGTATATGTTCTCACTTT--CATTCGATATTCA-CACAC-TGCTTTCATGCACTGTTTAAACTGGTAGTTA-AACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTAT----ACA--ATAATG--T----AT-CTG-------GGA---GATAACTGAAAA--AGGGGG-G-GGGGGGGGGT------------------A--AGGGA----GGGGGTTCTCTGGCTTGAAGCTTTTGTTCTC-TTT-GAT-TTC------------AAACATGCACG--TNCATCAAAAGTGTCTTT---A--TATACAAAAC-TAA-GTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGAG-TGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTATCA-TACATTCCAAA--AATAAATGATTTTT------GTTCTAATGGAAATGGGATATTTTTN-ATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCANTATATTATGATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAATTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTT--TTCCACTAGGAATTTCATTGTT---ATGATTCAANATAAGATACATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTTTTATAGGGTTAGGTATGATCGGGCTTTGAAGCTTATTATTTGCTTTTA--NTAT---TTTTTTCATTTTTTTTTAAATTTTGAATTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTGTATATAG-------TTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTTAATAGGTGGATGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAAGATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAATG-TTTTTAGCTAGGCTAGCATAATTGCTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCACTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTNAAATATGTATANCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
Reference ( gi|1 ) : AGAGAAATAGTATT----G----ATTGAAATTGTATATGTTTTCACTTT--CATTCAATATTCA-CACAC-TGCTTTCATGCGTTGTTTTAACTGGTAGTTA-AACCTAGT-------AAAT---ATTATATTGTAATTACTAGCCTTTAT----ACA--ATAATA--T----AT-CTG-------GGA---GATAACTGAAAA--AGGGGGTGGGGGGGGGGGT------------------A--AGGGA----GGGGGTTCTCTGGCTTGAAGCTTTTGTT------------TTC------------AAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-TGA-GTAA------GTATGTTCTGAAACAATTCCCAAGTTTTCAAAAAAATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGACGTCTGAGCTGGAG-TGTTTTAAACTTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTTGATTATTTTACTTTTATTCTTATCA-TACATTCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGAGATATTTTTA-ATGGACATCCAGTCTTGCAAAATGTGTAGTACTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTTGGTGGTAGATGAGCAAAAAGAACACAGTGGACTATCCAGTAGTTTTATCTGATGTAGAAAATTATTTGTTGCCAGTATATTATGATTGATCCGTGGTTGAAACCACTTTAATGTTGTATTTTTTGTTATCAAATATGGCCATGAAAACAATGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTGATTCCATGATGTTT--TTCAACTAGGAATTTCATTGTT---ATGATTCAATATAAGATACATAT-CTTGAA----TACCTTTTCTCTTTTTCATGTATATTTTGATAGGATTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTA--ATAT---TTTTTTCATTTTTTTTTAAATTTTGAATTGCAATAATGATACTGTGGTATTATAGAAAGTTTATATAAATATTGTATATTG-------TTTTTAATTATTGAAGAGAATATAAATGTCCGTTATCTTTT-TAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTTCTATTTTTATATATTCATTGTCAAATATTGGTGCTGATAAGAATATTTT-ATCATTTATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACATGATAAGATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAAAG-TTTTAAGCTAGGCTAACATAATTGTTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGTCGTTTTTCCTCCTAGCCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATTTGTATACCCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|4 : AGAGAAAAAATATT----CTATCATTGAAATTGTATATGTTTTCACTTT--CATTTTATATTAA-CACAT-TGCTTTAATGCACTGTTTAAACTGGTAATTA-AACCTAGT-------AAAT---ATTATATAGTAATTATTATCCTTTAT----ATAATATGAGAGTT----AA-CTGAAAAAAAGGAATCGATGGTTGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAAGCGA--AGGAA----GGGGGTTCTCTGGCTTGAAGCTTTTGTTCTCGTTTTGATTTTC------------AAACATGCACT--TTCATCAAAAGTGTCTT----A--TATACAAAATATAAAGTAAATATATGTATGCCGTGAAACAATTCCCAAGTTTTTAAAAACAAAATGTATCTGTTTTCAGTGATAGATATTTCATTTTATGTTTTATATGAACGTTGAAGTCTATGCTGGAG-TATTTTAAAATTTAATTT-ATTTTT-GAGCATCTACAATTGTATT-------TATAATATTTTGTCCCTAACTGAATTAGCTGGGTTATTTTACTTATATTCTTATCA-TACATTCCAAA--AATATATGATTTTT------GTTGTAATGAAAATGGGATACTTTTG-ATCGACATCCAATCTTGCAAAATGTGTAGTTTTTTTTGTGTGTTTTTTACA-TTCCCACAA--TAAACGATATATTGTCCTGGTG---AATGAGCAAAATGAACGTAGTGGACTGTCGAGTAGTTATATCTTAAGTAGAATATTGTTTGAAGCCATAATATTATAATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATC-------------AAAACACTGTTTTCCAAATTGCTTTACCAA-AATT---------ATTCCATGATGTTT--TTTCACTAGGAATTTCATTGTT---TTTATTCAAGGTAAGATACATAT-ATTGAA----TACCGTTTTTCTTTTTTATGTATATTTTTATAGGGTTAGGTAAGATCGGGCTTTGAAGCTC-TTATTT--TTTT---AT-T---CTTTTTAATTTT
gi|15 : aggaacataccctcacacagcttacaataagtgcacatataaaAGAGAAATATTATTCTATG----TTTGAAATGATATAAATCT-CAATTC--GATACGATATTTAACACAT-CGCGTTCATACACTGTTT-ACCTGGTGATTA-ATCCTGAT-------ATAT---AATATATTGTAATTATTATCCTTTAT----ACA--ATAATG--T----TT-CTT-------GGA---GATAATTGAAAA--TGGG
gi|20 : agactcctttttatcccctccgtcttaagctgtatgaaggatcgaagaggaacatattctcattgagcttacaataagtgcattatacaagAGAGAAATAATATTCTATG----CTTGAAATTGTATATGATCTCACTTT--TATTCAATATTCA-CACAT-TGTTTCCATGCaaaga
gi|9 : cagacttttcttatcctccccgtttcatgctgtatgaggggtcgatacagcttacaataggtgcacatataaaTGAAATTGTATATGTTCTCACTTTTTCATTCAATATTCA-CACAT-TGCTTTCATGCAATGTTTAAACTAGTAGTTA-AACCTAGT-------AAAT---ATTATATTTTAATTATTATCCT--------ACA--ATAAAG--T----AT-CTG-------GAA---GATAACTGAAAA--AAGAGG--------GGAAT------------------A--AGGGA----GGGTTTTTTCTGGCTTGAAGCTTTTGTTCTCGTTTCGATTTTC------------AAACATGCATG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-TAA-GTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTT-TATGTTTTATATAAAAGTTGAAGTCTGAGCTGGAG-TGTTTTAAAATTTAGATT-ATTGTTCGAGTAACTACAATAGTATATAATGATTATAATATTTTGCCTCTCACATAATGAGCTGGACTAaa
gi|21 : tattctccacgATTCA-CACAC-TGCTTTCATGCACTGTTTAAACTGGTAGTTA-AACCTAGT-------AAAT---ATTATATTGTAATTACTATCCCTTAT----ACA--ATAATG--T----AT-CTG-------GGA---GATAACTGAAAA--A--------AGGGGGAGGT------------------A--AGGGA----GGGGGTTCTCTGGCTTGAAGC
gi|8 : TTCA-CACAC-TGCTTTCATGCACTGTTTAAACTGGTAGTTA-AACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTAT----ACA--ATAATG--T----AT-CTG-------GGA---GATAACTGAAAA--AGGGGG-----GGGGGAAT------------------A--AGGGA----GGGGGTTCTCTGGCTTGAAGCTTTTGTT------------TTC------------AAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-TTA-GTAA------GTATGTCATGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTCTGTATGTTTTATATAAAA------GTCTGAGCTGGAG-TGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTG--TCTAACTGAATGAGCTGGATTATTTTACTTCTATTCTTAACA-TACATTCCAAA--AGTAAATGATTTTT------GTTCTAATGGAAATGGGATATTTTTT-ATGGACATCCAGTCTTTCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAc
gi|19 : TTCA-CACAT-TGCTTTCATGCACTGTTTAAACTGGTAGTTA-AACCTGGT-------AAAT---ATTATATTGTAATTACTATCCTTTAT----ACA--ATAATG--T----AT-CTG-------GGA---GATAACTGAAAA--AAGGGG----------AAT------------------A--AGGGA----GGGGGTTCTCTGGCTTGAAGCTTTTGTT------------TTC------------AAACATGCACG--TACATCA
gi|24 : TTCA-CACAC-TGCTTTCATGCACTGTTTAAACTGGTAGTTA-AACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTAT----ACA--ATAATG--TAGAGATAATG-------GGA---GATAACTGAAAA--AAGGGGGGGGGGGGGGGG
gi|12 : CACGTGCTTTAAT----TGTTTTG--TAGTAGATGCAATATAGC-------AAAT---AGGCCATTGT--------GTTTTGATCGAAACA--ATAATG--A----AT-GTT-------GGA---GATAACTGAAAGTTAGGCACAGAAAACGAAAAT------------------ATGGGGGATGTTGGGGGTTCTCTGACATTACGCTTTTGCT------------CTCGTTCGCAGTTTTAAACATATATGATTGCTTGTAA--TGTCTTT--------TACAAAA--TAA-GTTG------GTATATC--------ATTCCCAAGTTTTCAAAAACATA---TA-----TTTCAGAAATATATATTTATTTGTATGTTCTGT----------ACGTCTGAGCTGGAATTGTGTTAAA-TTTAAATCAACTTTTTGAATAT---CAATA-TGTA-------TTTAA------G-CTTTACTTGGATGAGCTCGA
gi|2 : ttaaatatacaaatgatgaacaatgtTGTTTAAACTGGTAATCA-AACCTAGTTTATATTATATTGTATTATATTGTAATTATTATCTTTTAT----ACA--ATAATG--T----AT-CTT-------GGA---GATATCTGAAAA--GGGGGG---GGGGGGGGTT------------------G--AGGAA----GGGAGTT----------------------------------TC------------AAACATGCACG--TTCATCAAAAGTGTCTT----G--TATACAAAAC-TAA-GTAA------GTATATCGTGAAACAATTCCCAAGTTTTCAAAAACAAATTGTATTTGTTTTCAGTAATAGATATTTCTTTATATGTTTTATATAAAAGTTGAAGTCTGAGCTGGAG-TGTTTTAAAATTTAAATT-CTTTTTCGAGCATCTACAATAGTATA-------TATAATATTTTGTCTC-AACTGAATGAGCTGAATTATTTTACTTATATTCTTATCA-TAAATTCCAAA--AATAAATGATTTAT------GTTTTAATGGAAATGGGGTACTTTTG-ATGGACATCCAGTCTTGTAAAATGTGTAGTATATTTTATGT-TTCTTTACA-TTCCCGCAA--TAAATGATAGATTGTCTCGGTGGTAGTTGAGCGAAATGAACACAGTGGACTTTCCAGTAGTTTTATCTTATGTAGAA--TTATTTGTTGCCAGTTTATTATGACTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAATTAATTCATCAA-GATTTTATGTATTATTCCATGATGTTT--TTCCACTAGGAATTTCATAGTT---ATGATTCAAAATAAGATACATAT-CTTGAA----AACCTTTTTGCTTTTTCATATATATTTTTATAGGATTAGGTATGATCGGGCTTTAAAGCTTATTATTTAATTTTCTTATATTTATTTTTTCA-TTTTTTTTAAATTTTGAATTGCAGTAATGATACTATGGTATTGTAGAAAGTTTATATTAATTCTGTATATAG-------TTTTCGGTTCTTGAAGAGAATATAAATGTCCGTCATTTTTTGTAATGTAATTAATCAAATGAATTCCCTTTTCATACCAGATTTTTACAAAATAAACTTGGTTTCTTATGTTGATATCTTCATTGTAAAATATGGGTGCTGATAAGAATGTTTT-ATCGTTAAGAGGTGGATGAGCCTTGAAAACTTagctcattcttccactat
gi|16 : cacT------------------A--AGGGA----GGGGGTTCTCTGGCGTGAAACCTCTGTTCTCATTTTGATCTTC------------AAACATGCATG--TTCATCAAAAGTGTCTTTTTAAGTTATACAAAAT-TAG-TTAA------GTATGTCAAGAAACGATTCCCAAGTTTTCAAAAACATATTGTTTTTGTTTTCAGTGATAGATACTTCgatttcttttacatacaaacttccacagacagaaaattttgttcaatctaaaatgttttt
gi|3 : gaaagggaaaaaaa------------------A--AGGGA----GGGGGTTCTCTGGCTTGAAGCTTTTGTT------------TTC------------AAACATGCAC---TACATCAAACGTGTCTTT---A--TATGCAGAAT-TAA-GAAA------GTATGTCATGAAACAATTCCCAAGTTTTCAAAAACATACTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGAG-TGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTATCA-AACATTCCAAA--AATAAATGATTTTT------GTTCTAATGGAAATGGGATATTTTTT-ATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAACAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTATTTGTTGCCAGTATATTATGATTGATCTGTGATTGAAACCACTGTAATGTTGTATTTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATGATATGTTTTATTCCATGATGTTT--TTCCACTAGGAATTTCATTGTT---ATGATTCAATATAAGATACATGT-CTTGAA----TACCTTTTCTCTTTTTCATGTATATTTTAATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTA--TTAT---TTTTTTCA-TTTTTTTTAAATTTTGAATTGCGGTAATGATACTATGATATTGTAGAAAGTATATATTAGTACTGTATATAG-------TTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATAAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTGTATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCATTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAAGATTTCTTTTACATACATACTTCCACAGACAGAAACTCTTGTTATATCTAAAATG-TTTTTAGCTAG
gi|17 : TCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGAG-TGTTTTAAAATTTTAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTATCA-T
gi|13 : TTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGAG-TGTTTTAAAATTTAAATT-ATTTTTCGAGCATGTACAATAATATA-------TGTGATATTTTGTCTCTCACTGAATGAGCTGGATTATTTTACTTATATTCT-ATCA-TACATTCCAAA--AATAAATGATTTTT------GTCCTAATGGAAATGACATATTTTTTTATGGACATCCAGTCTTGCAAAATGTGTAGTA-TTTTTGGAT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATCTTTTGTTGCCATTATATTATGATTGATCAGTGATTGAAACCACTGTAATGTTGT
gi|10 : TTACATTTATTCATAAAAGTAAAATCCAGATCAATAAACGTTTTTTTCCTTTGTTATGATGTAAAT----------TA-A---ATATCCACTCT--CAAA--GAACA-TATTTTATGTGT-TCCTTCACAATTCCC-CAACGTGCATGGAAAATTGTCTCTGTGATGGATGAACTGAATGCACACAGTGGACTATCGAGTA-TTTTATCTTATAAAGGAGATTGTTTGTTGCTATGATGTTATGATTGATCCATGTCTGGAACTACTGCAGTGTTGCATCTTTTGATGTTTTATATAATCATTAAAGTAGTGTTTT-CGAGTTG---GGTCACTGATTTTATGGTTTAGTTCATAAACTTTCGCCCAAGCAGGCATGTGATTGTTTTCAGGGATAAAAACAAAATGCATATAC--GAAGATGTACC----------TTCA--TATATTTTTATA
gi|6 : aataggttaaatgaagttacGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCATGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACA--GTTTTCCAAATTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTT--TTCCACTAGGAATTTCATTGTT---ATGATTCAGTATAAGATAAATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTATGATAGGGTTAGGTATGATCAGACTTTGAAGCTTATTATTTGCTTTTA--TTAT---TTTTTTAATTTTTTTTTTAATTTTGAATTGCAGTAATGATACTGTGGAATTGTAGACAGTTTATATTAATGCTGTATATTATATATATTTTTCAATTCTTGAAGAGAATATACATGTCTGTCATCTTTTGTAATGTTGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAACAATGTTTTAATCGTTAATAGGTGGATGAGCCTTTAAAATTCCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAAGATTTCTTTTACATACATACTTCCACAGACAGAAATTTTTGTTAAATCTAAAATG-TTTTTAGCTAGGCTAGCATAATTG-CTTTTTTCTAAAATAAGTCTCCcgg
gi|25 : ATTGATCCGTGATTGAAACCACTGTAATGTTGCATCTTTTGTTATCAAATATGGCAATGAAAACACTGTTTTCCAAATTGCTTCATCAA-AATTATATGTTTTATTCCATGA-ATTT--TTga
gi|5 : TTTTTCATTTGTTTTTAAATTTTGAATTGCAGTAATGATAATGTGGTATTGTAGAAAGTTTATATTAATACTGTATATAG-------TTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCGAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTCAAATATTGGTGCTGATAAAAATGTTTT-ATCCTTCATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAC---GTGTTTGTTACACTTGAATAGATTTCTTTTACATACATATTTCCACAGACAGAGACTTTTGTTATATCTAGAATG-TTTTTAACTTAGCTAGCATAATTGCTTTT-TTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATTTATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATTTTTTCACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTCTGAACTAACAGGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCACTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATAACCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|14 : aTTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTATATATAG-------TTTTTAATTCATGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAATTTTTTACAAATTAGGCTTGGTTTCCTATTTTCATATCTTTATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTAAATAAGTGGATGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTTATAAGATTTCTGTTACATACATACTTCCACAGAGAGAAACTTTTGTTATATCTAAAATG-TTTTTAACTA
gi|11 : CACTTGATTAGATTTCTTTTACATACCTATTTCCACAGACAGAAAGTTTTGTTATATCTAAAAAAATTTTAA-CTAAGCTAGCATAATT-TCTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATTTTTACACAATACAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCACTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCA
gi|2 : GATTTCTTTTACATACAAACTTCCACAGACAGAAAATTTTGTTCAATCTAAAATG-TTTT
gi|7 : cactgtttaaactggtaatcaaacctagtttatattatattgtattatattgtaattattatcttttatacaataatgtatcttggagatatctgaaaaggggggggggggggttgaggaagggagtttcaaacatgcacgttcatcaaaagtgtcttgtatacaaaactaagtaagtatatcgtgaaacaattcccaagttttcaaaaacaaattgtatttgttttcagtaatagatatttctttatatgttttatataaaagttgaagtctgagctggagtgttttaaaatttaaattctttttcgagcatctacaatagtatatataatattttgtctcaactgaatgagctgaattattttacttatattcttatcataaattccaaaaataaatgatttatgttttaatggaaatggggtacttttgatggacatccagtcttgtaaaatgtgtagtatattttatgtttctttacattcccgcaataaatgatagattgtctcggtggtagttgagcgaaatgaacacagtggactttccagtagttttatcttatgtagaattatttgttgccagtttattatgactgatccgtgattgaaaccactgtaatgttgtatcttttgttatcaaatatggccatgaaaacactgttttccaaattaattcatcaagattttatgtattattccatgatgtttttccactaggaatttcatagttatgattcaaaataagatacatatcttgaaaacctttttgctttttcatatatatttttataggattaggtatgatcgggctttaaagcttattatttaattttcttatatttattttttcattttttttaaattttgaattgcagtaatgatactatggtattgtagaaagtttatattaattctgtatatagttttcggttcttgaagagaatataaatgtccgtcattttttgtaatgtaattaatcaaatgaattcccttttcataccagatttttacaaaataaacttggtttcttatgttgatatcttcattgtaaaatatgggtgctgataagaatgttttatcgttaagaggtggatgagccttgaaaacttTTACATACATATTTCCACAGACAGAAACCTTCGTTATATCTTAAATG-TTTCTAACTAGGCTAGCATAATTGCTTTT-TTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTACATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTATACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAAGTAACACGCTCATTCT---------TTG---ATTTAATAACTAATTCTTAAAATAGGTAGATACACTGCCGCTTTTTCTCCTAACCCTCCGTTTAAATGTAGGACGTGGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTAATGTTCGTCCGTt
gi|18 : TACATACTTCCACAGACAGAAACTTTTGTTAAATCTAAAATG-TTTTA-GCTATGCTAGCATAATTGCTTTTTTTCTAAAAGCAGTCTCTTAA-CCATGTTGCTTTTAATGCTGTTATATATGCAAACATTTTAGTCATTTTCAGACAATCATCGACATTATCTTTATACAATACGGTA
gi|22 : TGTCTCTGAACTAACACACTCATTATGTAAATTATATGTAAATTTAATAACTTATTCTTAAAATACATAGATAACCCGTCACTTTTTCTCCTAGCTTTCCGGTTACATTTAAGACTAGGGCAACTTAAATAT-TATACCCGT
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|23 ): GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGAGTAAAGATAACGTCACGTTTAAAGCTAATGAAATATCGATCTATTTGAAATATTATGTTTAATCAATATATCAAAACAATAAGCAAACTATA
Unaligned ( gi|26 ): ATCATCTTGCTTATATTACATGTAAGAGTTCTAACAGAAATGGGGTGTGGTGGTGGAGGGGGGGGGGGGGGGGGGGGGGGAGGGGAAAG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 1111111 333333333333333333333333 44444444444444444444444444 888888888888888 111111 111111 1111111 1111 111111 111 1111 22222 2222222 111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 333333333 111 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
lowQualScore : 1 0 1 0 11 4 4 4444444 777 8888 4 444444444444444444444444 66 0 0 555 8888 11111111111111111111111111 4 222222222222222 4 66 1 0 444444 77 5 444444 5 1 0 777 4 4444444 5 77 2222 77 666666 5 3 0 5 5 0 77 3 0 1 1 4 0 5 1 1 99 111 1 6 4444 3 3 0 3 11 00000 7 1111111 6 0 000 7 7 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 222222222 444 1 5 1 0 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666
lowQualScore : . . . . .. . . ....... ... .... . ........................ .. . . ... .... .......................... . ............... . .. . . ...... .. . ...... . . . ... . ....... . .. .... .. ...... . . . . . . .. . . . . . . . . . .. ... . . .... . . . . .. ..... . ....... . . ... . . ................................................................................................................. ......... ... . . . . ..........................................................................................................
lowQualScore : 2 6 0 8 00 6 4 4444444 888 5555 0 888888888888888888888888 11 1 1 999 5555 55555555555555555555555555 0 444444444444444 4 11 0 1 666666 22 0 444444 4 0 1 888 4 4444444 0 99 1111 99 444444 7 0 1 7 7 1 99 9 4 0 7 3 7 7 9 7 22 777 0 7 2222 2 3 8 2 88 00000 3 7777777 7 8 000 3 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 000000000 000 0 2 0 8 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
consensus : AGAGAAATAATATTCTACGNTTGAAATTGTATATGTTCTCACTTT--CATTCGATATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTTCTCG-TT-G--A-T-TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGGGATA-TTTTTNATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAANATAAGATACATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTTTNATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGCTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCGCTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATACCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
Reference ( family-2706 ) : AGAGAAATAATATTCTATGNTTGAAATTGTATATGTTCTCACTTT--CATTCGATATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTTCTC--TTTG--A-T-TT-CAAACATGCACG--TNCATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATAAATGATTTTT------GTTCTAATGGAAATGGGATA-TTTTTNATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCANTATATTATGATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAATTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAANATAAGATACATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTTTTATAGGGTTAGGTATGATCGGGCTTTGAAGCTTATTATTTGCTTTTANTAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTTAATAGGTGGATGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGCTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCACTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTNAAATATGTATANCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|1 : AGAGAAATAGTATT----GATTGAAATTGTATATGTTTTCACTTT--CATTCAATATTCA-CACACTGCTTTCATGCGTTGTTTTAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTAGCCTTTATACAATAATAT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGGTGGGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTT---------------TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-GAGTAA------GTATGTTCTGAAACAATTCCCAAGTTTTCAAAAAAATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGACGTCTGAGCTGGA---GTGTTTTAAACTTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTTGATTATTTTACTTTTATTCTTAT-CATACA--T----TCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGAGATA-TTTTTAATGGACATCCAGTCTTGCAAAATGTGTAGTACTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTTGGTGGTAGATGAGCAAAAAGAACACAGTGGACTATCCAGTAGTTTTATCTGATGTAGAAAATTATTTGTTGCCAGTATATTATGATTGATCCGTGGTTGAAACCACTTTAATGTTGTATTTTTTGTTATCAAATATGGCCATGAAAACAATGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTGATTCCATGATGTTTTTCA--ACTAGGAATTTCATTGTT---ATGATTCAATATAAGATACATAT-CTTGAA----TACCTTTTCTCTTTTTCATGTATATTTTGATAGGATTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTAATAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAATAATGATACTGTGGTATTATAGAAAGTTTATATAAATATTG-------TATATTGTTTTTAATTATTGAAGAGAATATAAATGTCCGTTATCTTTT-TAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTTCTATTTTTATATATTCATTGTCAAATATTGGTGCTGATAAGAATATTTT-ATCATTTATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACATGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAAAGTTTTAAGCTAGGCTAACATAATTGTTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGTCGTTTTTCCTCCTAGCCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATTTGTATACCCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|10 : TTACTTACATT--TATTCATAAAAGTAAAATCCAGATCAATAAACGTTTTTTTCCTTTGTTATGATGTAAAT--------------TAAATATCCACTCT--CAAA--GAACA-TATTTTATGTGT-TCCTTCACAATTCCC-CAACGTGCATGGAAAATTGTCTCTGTGATGGATGAACTGAATGCACACAGTGGACTATCGAGTA-TTTTATCTTATAAAGGAGATTGTTTGTTGCTATGATGTTATGATTGATCCATGTCTGGAACTACTGCAGTGTTGCATCTTTTGATGTTTTATATAATCATTAAAGTAGTGTTTT-CGAGTTG---GGTCACTGATTTTATGGTTTAGTTCATAAACTTTCGCCCAAGCAGGCATGTGATTGTTTTCAGGGATAAAAACAAAATGCATATAC--GAAGATGTACC----------TTCA--TATATTTTTATACGG
gi|11 : aataggttaaatgaagCACTTGATTA---GATTTCTTTTACATACCTATTTCCACAGACAGAAAGTTTTGTTATATCTAAAAAAATTTTAACTAAGCTAGCATAATTTCTTTT-TTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATTTTTACACAATACAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCACTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCA
gi|12 : ACAATAATGA----AT-GTTGGAGATAACTGAAAGTTA---------------GGCACAGAA--AACGAAAATATGGGGGATGTTGGGGG--------------------------TTCTCTG-ACATTACGCTTTTGCTCTCG-TTCGCAG-T-TT-TAAACATATATGATTGCTTGTAA--TGTCTTT--------TACAAAA--T-AAGTTG------GTATATC--------ATTCCCAAGTTTTCAAAAACATA---TA-----TTTCAGAAATATATATTTATTTGTATGTTCTGTAC----------GTCTGAGCTGGAATTGTGTT---AAATTTAAATCAACTTTTTGAATAT---CAATA-TGTA-------TTTAA------G-CTTTACTTGGATGAGCTCGA
gi|13 : ttaaatatacaaatgatgaacaatgtcacgtgctttaattgttttgtagtagatgcaatatagcaaataggccattgtgttttgatcgaaTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATGTACAATAATATA-------TGTGATATTTTGTCTCTCACTGAATGAGCTGGATTATTTTACTTATATTCT-AT-CATACA--T----TCCAAA--AATAAATGATTTTT------GTCCTAATGGAAATGACATATTTTTTTATGGACATCCAGTCTTGCAAAATGTGTAGTA-TTTTTGGAT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATCTTTTGTTGCCATTATATTATGATTGATCAGTGATTGAAACCACTGTAATGTTGTagctcattcttccactat
gi|14 : TTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTA-------TATATAGTTTTTAATTCATGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAATTTTTTACAAATTAGGCTTGGTTTCCTATTTTCATATCTTTATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTAAATAAGTGGATGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTTATAA---GATTTCTGTTACATACATACTTCCACAGAGAGAAACTTTTGTTATATCTAAAATGTTTTTAACTA
gi|15 : AGAGAAATATTATTCTATGTTTGAAATGATATAAAT-CTCAATTC--GATACGATATTTAACACATCGCGTTCATACACTGTTTAC-CTGGTGATTAATCCTGAT-------ATAT---AATATATTGTAATTATTATCCTTTATACAATAATGT----TT-CTTGGAGATAATTGAAAA--T---------------GG----G
gi|16 : agactcctttttatcccctccgtcttaagctgtatgaaggatcgaagaggaacatattctcattgagcttacaataagtgcattatacaagTAAGGGA----GGGGG--------------------------TTCTCTG-GCGTGAAACCTCTGTTCTCATTTTG--A-TCTT-CAAACATGCATG--TTCATCAAAAGTGTCTTTTTAAGTTATACAAAAT-T-AGTTAA------GTATGTCAAGAAACGATTCCCAAGTTTTCAAAAACATATTGTTTTTGTTTTCAGTGATAGATACTTCaaaga
gi|17 : gaaagggaaaaaaaTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTTAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CAT
gi|18 : TACATACTTCCACAGACAGAAACTTTTGTTAAATCTAAAATGTTTT-AGCTATGCTAGCATAATTGCTTTTTTTCTAAAAGCAGTCTCTTAA-CCATGTTGCTTTTAATGCTGTTATATATGCAAACATTTTAGTCATTTTCAGACAATCATCGACATTATCTTTATACAATACGGTA
gi|19 : TTCA-CACATTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTGGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------AG----GGG--AA--------TAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGT--------------T-TT-CAAACATGCACG--TACATCA
gi|2 : CACTGTTTAAACTGGTAATCAAACCTAGTTTATATTATATTGTATTATATTGTAATTATTATCTTTTATACAATAATGT----AT-CTTGGAGATATCTGAAAA------------------------------GGGGGGGGG-----------GGGGG--------------------------TT----GAG---GAAG-----G----------G--AGT-TT-CAAACATGCACG--TTCATCAAAAGTGTCTT----G--TATACAAAAC-T-AAGTAA------GTATATCGTGAAACAATTCCCAAGTTTTCAAAAACAAATTGTATTTGTTTTCAGTAATAGATATTTCTTTATATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-CTTTTTCGAGCATCTACAATAGTATA-------TATAATATTTTGTCTC-AACTGAATGAGCTGAATTATTTTACTTATATTCTTAT-CATAAA--T----TCCAAA--AATAAATGATTTAT------GTTTTAATGGAAATGGGGTA-CTTTTGATGGACATCCAGTCTTGTAAAATGTGTAGTATATTTTATGT-TTCTTTACA-TTCCCGCAA--TAAATGATAGATTGTCTCGGTGGTAGTTGAGCGAAATGAACACAGTGGACTTTCCAGTAGTTTTATCTTATGTAGAA--TTATTTGTTGCCAGTTTATTATGACTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAATTAATTCATCAA-GATTTTATGTATTATTCCATGATGTTTTTCC--ACTAGGAATTTCATAGTT---ATGATTCAAAATAAGATACATAT-CTTGAA----AACCTTTTTGCTTTTTCATATATATTTTTATAGGATTAGGTATGATCGGGCTTTAAAGCTTATTATTTAATTTTCTTATATTTATTTTTTCA-TTTTTTTTAAATTTTGAATTGCAGTAATGATACTATGGTATTGTAGAAAGTTTATATTAATTCTG-------TATATAGTTTTCGGTTCTTGAAGAGAATATAAATGTCCGTCATTTTTTGTAATGTAATTAATCAAATGAATTCCCTTTTCATACCAGATTTTTACAAAATAAACTTGGTTTCTTATGTTGATATCTTCATTGTAAAATATGGGTGCTGATAAGAATGTTTT-ATCGTTAAGAGGTGGATGAGCCTTGAAAACTT
gi|2 : CTTGAAAACTTGATTTCTTTTACATACAAACTTCCACAGACAGAAAATTTTGTTCAATCTAAAATGTTTTTgatttcttttacatacaaacttccacagacagaaaattttgttcaatctaaaatgttttt
gi|20 : cactgtttaaactggtaatcaaacctagtttatattatattgtattatattgtaattattatcttttatacaataatgtatcttggagatatctgaaaaggggggggggggggttgaggaagggagtttcaaacatgcacgttcatcaaaagtgtcttgtatacaaaactaagtaagtatatcgtgaaacaattcccaagttttcaaaaacaaattgtatttgttttcagtaatagatatttctttatatgttttatataaaagttgaagtctgagctggagtgttttaaaatttaaattctttttcgagcatctacaatagtatatataatattttgtctcaactgaatgagctgaattattttacttatattcttatcataaattccaaaaataaatgatttatgttttaatggaaatggggtacttttgatggacatccagtcttgtaaaatgtgtagtatattttatgtttctttacattcccgcaataaatgatagattgtctcggtggtagttgagcgaaatgaacacagtggactttccagtagttttatcttatgtagaattatttgttgccagtttattatgactgatccgtgattgaaaccactgtaatgttgtatcttttgttatcaaatatggccatgaaaacactgttttccaaattaattcatcaagattttatgtattattccatgatgtttttccactaggaatttcatagttatgattcaaaataagatacatatcttgaaaacctttttgctttttcatatatatttttataggattaggtatgatcgggctttaaagcttattatttaattttcttatatttattttttcattttttttaaattttgaattgcagtaatgatactatggtattgtagaaagtttatattaattctgtatatagttttcggttcttgaagagaatataaatgtccgtcattttttgtaatgtaattaatcaaatgaattcccttttcataccagatttttacaaaataaacttggtttcttatgttgatatcttcattgtaaaatatgggtgctgataagaatgttttatcgttaagaggtggatgagcAGAGAAATAATATTCTATGCTTGAAATTGTATATGATCTCACTTT--TATTCAATATTCA-CACATTGTTTCCATGCA
gi|21 : cagacttttcttatcctccccgtttcatgctgtatgaggggtcgatacagcttacaataggtgcacatataaaATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCCTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------------------AGGGGGAGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCa
gi|22 : TGTCTCTGAACTAACACACTCATTATGTAAATTATATGTAAATTTAATAACTTATTCTTAAAATACATAGATAACCCGTCACTTTTTCTCCTAGCTTTCCGGTTACATTTAAGACTAGGGCAACTTAAATAT-TATACCCGTc
gi|24 : TTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGTAGAGATAATGGGAGATAACTGAAAA--A---------------AG----GGG--GGGGGGGGGG
gi|25 : ATTGATCCGTGATTGAAACCACTGTAATGTTGCATCTTTTGTTATCAAATATGGCAATGAAAACACTGTTTTCCAAATTGCTTCATCAA-AATTATATGTTTTATTCCATGA-ATTTTTgg
gi|3 : AAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTT---------------TT-CAAACATGCAC---TACATCAAACGTGTCTTT---A--TATGCAGAAT-T-AAGAAA------GTATGTCATGAAACAATTCCCAAGTTTTCAAAAACATACTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CAAACA--T----TCCAAA--AATAAATGATTTTT------GTTCTAATGGAAATGGGATA-TTTTTTATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAACAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTATTTGTTGCCAGTATATTATGATTGATCTGTGATTGAAACCACTGTAATGTTGTATTTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATGATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAATATAAGATACATGT-CTTGAA----TACCTTTTCTCTTTTTCATGTATATTTTAATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTCA-TTTTTTTTAAATTTTGAATTGCGGTAATGATACTATGATATTGTAGAAAGTATATATTAGTACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATAAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTGTATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCATTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTCTTGTTATATCTAAAATGTTTTTAGCTAG
gi|4 : AGAGAAAAAATATTCTATCATTGAAATTGTATATGTTTTCACTTT--CATTTTATATTAA-CACATTGCTTTAATGCACTGTTTAAACTGGTAATTAAACCTAGT-------AAAT---ATTATATAGTAATTATTATCCTTTATATAATA------------TGAGAGTTAACTGAAAA--AAAGGAATCGATGGTTGG----GGG--GGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGAAAGCGAAGGAAGGGGGTTCTCTG-GCTTGAAGCTTTTGTTCTCGTTTTG--ATT-TT-CAAACATGCACT--TTCATCAAAAGTGTC-TT---A--TATACAAAATATAAAGTAAATATATGTATGCCGTGAAACAATTCCCAAGTTTTTAAAAACAAAATGTATCTGTTTTCAGTGATAGATATTTCATTTTATGTTTTATATGAACGTTGAAGTCTATGCTGGA---GTATTTTAAAATTTAATTT-ATTTTT-GAGCATCTACAATTGTATT-------TATAATATTTTGTCCCTAACTGAATTAGCTGGGTTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATATATGATTTTT------GTTGTAATGAAAATGGGATA-CTTTTGATCGACATCCAATCTTGCAAAATGTGTAGTTTTTTTTGTGTGTTTTTTACA-TTCCCACAA--TAAACGATATATTGTCCTGGTG---AATGAGCAAAATGAACGTAGTGGACTGTCGAGTAGTTATATCTTAAGTAGAATATTGTTTGAAGCCATAATATTATAATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATC-------------AAAACACTGTTTTCCAAATTGCTTTACCAA-AA---------TTATTCCATGATGTTTTTTC--ACTAGGAATTTCATTGTT---TTTATTCAAGGTAAGATACATAT-ATTGAA----TACCGTTTTTCTTTTTTATGTATATTTTTATAGGGTTAGGTAAGATCGGGCTTTGAAGCTC-TTATTT--TTTTAT--T-----CTTTTTAATTTT
gi|5 : aggaacataccctcacacagcttacaataagtgcacatataaaTTTTTCATTTGTTTTTAAATTTTGAATTGCAGTAATGATAATGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCGAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTCAAATATTGGTGCTGATAAAAATGTTTT-ATCCTTCATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCC---ACGTGTTTGTTACACTTGAATA---GATTTCTTTTACATACATATTTCCACAGACAGAGACTTTTGTTATATCTAGAATGTTTTTAACTTAGCTAGCATAATTGC-TTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATTTATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATTTTTTCACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTCTGAACTAACAGGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCACTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATAACCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|6 : aGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCATGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACA--GTTTTCCAAATTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAGTATAAGATAAATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTATGATAGGGTTAGGTATGATCAGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTAATTTTTTTTTTAATTTTGAATTGCAGTAATGATACTGTGGAATTGTAGACAGTTTATATTAATGCTGTATATTATATATATTTTTCAATTCTTGAAGAGAATATACATGTCTGTCATCTTTTGTAATGTTGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAACAATGTTTTAATCGTTAATAGGTGGATGAGCCTTTAAAATTCCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAATTTTTGTTAAATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGC-TTTTTTCTAAAATAAGTCTCC
gi|7 : TTACATACATATTTCCACAGACAGAAACCTTCGTTATATCTTAAATGTTTCTAACTAGGCTAGCATAATTGCTTTT-TTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTACATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTATACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAAGTAACACGCTCATTCT---------TTG---ATTTAATAACTAATTCTTAAAATAGGTAGATACACTGCCGCTTTTTCTCCTAACCCTCCGTTTAAATGTAGGACGTGGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTAATGTTCGTCCGTga
gi|8 : TTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGAA---TAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTT---------------TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-TAGTAA------GTATGTCATGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTCTGTATGTTTTATATAAAAGT------CTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCT--AACTGAATGAGCTGGATTATTTTACTTCTATTCTTAA-CATACA--T----TCCAAA--AGTAAATGATTTTT------GTTCTAATGGAAATGGGATA-TTTTTTATGGACATCCAGTCTTTCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TA
gi|9 : TATTCTCCACGTGAAATTGTATATGTTCTCACTTTTTCATTCAATATTCA-CACATTGCTTTCATGCAATGTTTAAACTAGTAGTTAAACCTAGT-------AAAT---ATTATATTTTAATTATTATCCT----ACAATAAAGT----AT-CTGGAAGATAACTGAAAA--A---------------AG----AGG--GGAA------TAAGGGA----GGGTT--------------------------TTTTCTG-GCTTGAAGCTTTTGTTCTCGTTTCG--A-T-TTTCAAACATGCATG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTT-TATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAGATT-ATTGTTCGAGTAACTACAATAGTATATAATGATTATAATATTTTGCCTCTCACATAATGAGCTGGACTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|23 ): GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGAGTAAAGATAACGTCACGTTTAAAGCTAATGAAATATCGATCTATTTGAAATATTATGTTTAATCAATATATCAAAACAATAAGCAAACTATA
Unaligned ( gi|26 ): ATCATCTTGCTTATATTACATGTAAGAGTTCTAACAGAAATGGGGTGTGGTGGTGGAGGGGGGGGGGGGGGGGGGGGGGGAGGGGAAAG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 1111111 333333333333333333333333 44444444444444444444444444 7777777777777777 111111 111111 1111111 1111 111111 111 1111 22222 2222222 111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 333333333 111 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
lowQualScore : 1 55 1 0 11 4 4 4444444 777 8888 4 444444444444444444444444 66 0 0 555 8888 11111111111111111111111111 4 9999999999999999 4 66 1 0 444444 77 5 444444 5 1 0 777 4 4444444 5 77 2222 77 1 666666 88 5 5 0 77 3 0 0 1 4 0 5 1 1 99 111 1 6 4444 3 1 0 3 0 00000 7 1111111 6 0 000 7 7 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 222222222 444 5 0 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666
lowQualScore : . .. . . .. . . ....... ... .... . ........................ .. . . ... .... .......................... . ................ . .. . . ...... .. . ...... . . . ... . ....... . .. .... .. . ...... .. . . . .. . . . . . . . . . .. ... . . .... . . . . . ..... . ....... . . ... . . ................................................................................................................. ......... ... . . ..........................................................................................................
lowQualScore : 2 22 0 8 00 6 4 4444444 888 5555 0 888888888888888888888888 11 1 1 999 5555 55555555555555555555555555 0 4444444444444444 4 11 3 1 666666 22 0 444444 4 0 1 888 4 4444444 0 99 1111 99 4 444444 77 7 7 1 99 9 4 7 7 3 7 7 9 7 22 777 0 7 2222 2 0 8 2 8 00000 3 7777777 7 8 000 3 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 000000000 000 2 8 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
consensus : AGAGAAATAATATTCTACGNTTGAAATTGTATATGTTCTCACTTT--CATTCGATATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTTCTCG--TT---GA-T-TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGGGATATTTTTN-ATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAANATAAGATACATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTTTNATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGCTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCGCTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATACCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
Reference ( family-2706 ) : AGAGAAATAATATTCTACGNTTGAAATTGTATATGTTCTCACTTT--CATTCGATATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTTCTCG--TT---GA-T-TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGGGATATTTTTN-ATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAANATAAGATACATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTTTNATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGCTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCGCTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATACCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|1 : AGAGAAATAGTATT----GATTGAAATTGTATATGTTTTCACTTT--CATTCAATATTCA-CACACTGCTTTCATGCGTTGTTTTAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTAGCCTTTATACAATAATAT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGGTGGGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTT----------------TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-GAGTAA------GTATGTTCTGAAACAATTCCCAAGTTTTCAAAAAAATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGACGTCTGAGCTGGA---GTGTTTTAAACTTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTTGATTATTTTACTTTTATTCTTAT-CATACA--T----TCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGAGATATTTTTA-ATGGACATCCAGTCTTGCAAAATGTGTAGTACTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTTGGTGGTAGATGAGCAAAAAGAACACAGTGGACTATCCAGTAGTTTTATCTGATGTAGAAAATTATTTGTTGCCAGTATATTATGATTGATCCGTGGTTGAAACCACTTTAATGTTGTATTTTTTGTTATCAAATATGGCCATGAAAACAATGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTGATTCCATGATGTTTTTCA--ACTAGGAATTTCATTGTT---ATGATTCAATATAAGATACATAT-CTTGAA----TACCTTTTCTCTTTTTCATGTATATTTTGATAGGATTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTAATAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAATAATGATACTGTGGTATTATAGAAAGTTTATATAAATATTG-------TATATTGTTTTTAATTATTGAAGAGAATATAAATGTCCGTTATCTTTT-TAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTTCTATTTTTATATATTCATTGTCAAATATTGGTGCTGATAAGAATATTTT-ATCATTTATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACATGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAAAGTTTTAAGCTAGGCTAACATAATTGTTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGTCGTTTTTCCTCCTAGCCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATTTGTATACCCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|10 : TTACTTACATT--TATTCATAAAAGTAAAATCCAGATCAATAAACGTTTTTTTCCTTTGTTATGATGTAAAT--------------TAAATATCCACTCT--CAAA--GAACA-TATTTTATGTGT-TCCTTCACAATTCCC-CAACGTGCATGGAAAATTGTCTCTGTGATGGATGAACTGAATGCACACAGTGGACTATCGAGTA-TTTTATCTTATAAAGGAGATTGTTTGTTGCTATGATGTTATGATTGATCCATGTCTGGAACTACTGCAGTGTTGCATCTTTTGATGTTTTATATAATCATTAAAGTAGTGTTTT-CGAGTTG---GGTCACTGATTTTATGGTTTAGTTCATAAACTTTCGCCCAAGCAGGCATGTGATTGTTTTCAGGGATAAAAACAAAATGCATATAC--GAAGATGTACC----------TTCA--TATATTTTTATACGG
gi|11 : aataggttaaatgaagCACTTGATTA---GATTTCTTTTACATACCTATTTCCACAGACAGAAAGTTTTGTTATATCTAAAAAAATTTTAACTAAGCTAGCATAATTTCTTTT-TTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATTTTTACACAATACAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCACTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCA
gi|12 : ACAATAATGA----AT-GTTGGAGATAACTGAAAGTTA---------------GGCACAGAA--AACGAAAATATGGGGGATGTTGGGGG--------------------------TTCTCTG-ACATTACGCTTTTGCTCTCG--TTCGCAG-T-TT-TAAACATATATGATTGCTTGTAA--TGTCTTT--------TACAAAA--T-AAGTTG------GTATATC--------ATTCCCAAGTTTTCAAAAACATA---TA-----TTTCAGAAATATATATTTATTTGTATGTTCTGTAC----------GTCTGAGCTGGAATTGTGTT---AAATTTAAATCAACTTTTTGAATAT---CAATA-TGTA-------TTTAA------G-CTTTACTTGGATGAGCTCGA
gi|13 : ttaaatatacaaatgatgaacaatgtcacgtgctttaattgttttgtagtagatgcaatatagcaaataggccattgtgttttgatcgaaTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATGTACAATAATATA-------TGTGATATTTTGTCTCTCACTGAATGAGCTGGATTATTTTACTTATATTCT-AT-CATACA--T----TCCAAA--AATAAATGATTTTT------GTCCTAATGGAAATGACATATTTTTTTATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTGG-AT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATCTTTTGTTGCCATTATATTATGATTGATCAGTGATTGAAACCACTGTAATGTTGTagctcattcttccactat
gi|14 : TTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTA-------TATATAGTTTTTAATTCATGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAATTTTTTACAAATTAGGCTTGGTTTCCTATTTTCATATCTTTATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTAAATAAGTGGATGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTTATAA---GATTTCTGTTACATACATACTTCCACAGAGAGAAACTTTTGTTATATCTAAAATGTTTTTAACTA
gi|15 : AGAGAAATATTATTCTATGTTTGAAATGATATAAAT-CTCAATTC--GATACGATATTTAACACATCGCGTTCATACACTGTTTAC-CTGGTGATTAATCCTGAT-------ATAT---AATATATTGTAATTATTATCCTTTATACAATAATGT----TT-CTTGGAGATAATTGAAAA--T---------------GG----G
gi|16 : agactcctttttatcccctccgtcttaagctgtatgaaggatcgaagaggaacatattctcattgagcttacaataagtgcattatacaagTAAGGGA----GGGGG--------------------------TTCTCTG-GCGTGAAACCTCTGTTCTCA--TTTT-GA-TCTT-CAAACATGCATG--TTCATCAAAAGTGTCTTTTTAAGTTATACAAAAT-T-AGTTAA------GTATGTCAAGAAACGATTCCCAAGTTTTCAAAAACATATTGTTTTTGTTTTCAGTGATAGATACTTCaaaga
gi|17 : gaaagggaaaaaaaTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTTAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CAT
gi|18 : TACATACTTCCACAGACAGAAACTTTTGTTAAATCTAAAATGTTTT-AGCTATGCTAGCATAATTGCTTTTTTTCTAAAAGCAGTCTCTTAA-CCATGTTGCTTTTAATGCTGTTATATATGCAAACATTTTAGTCATTTTCAGACAATCATCGACATTATCTTTATACAATACGGTA
gi|19 : TTCA-CACATTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTGGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------AG----GGG--AA--------TAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGT---------------T-TT-CAAACATGCACG--TACATCA
gi|2 : CACTGTTTAAACTGGTAATCAAACCTAGTTTATATTATATTGTATTATATTGTAATTATTATCTTTTATACAATAATGT----AT-CTTGGAGATATCTGAAAA------------------------------GGGGGGGGG-----------GGGGG--------------------------TT----GAG---GAAG-----------G-------GAGT-TT-CAAACATGCACG--TTCATCAAAAGTGTCTT----G--TATACAAAAC-T-AAGTAA------GTATATCGTGAAACAATTCCCAAGTTTTCAAAAACAAATTGTATTTGTTTTCAGTAATAGATATTTCTTTATATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-CTTTTTCGAGCATCTACAATAGTATA-------TATAATATTTTGTCTC-AACTGAATGAGCTGAATTATTTTACTTATATTCTTAT-CATAAA--T----TCCAAA--AATAAATGATTTAT------GTTTTAATGGAAATGGGGTACTTTTG-ATGGACATCCAGTCTTGTAAAATGTGTAGTATATTTTATGT-TTCTTTACA-TTCCCGCAA--TAAATGATAGATTGTCTCGGTGGTAGTTGAGCGAAATGAACACAGTGGACTTTCCAGTAGTTTTATCTTATGTAGAA--TTATTTGTTGCCAGTTTATTATGACTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAATTAATTCATCAA-GATTTTATGTATTATTCCATGATGTTTTTCC--ACTAGGAATTTCATAGTT---ATGATTCAAAATAAGATACATAT-CTTGAA----AACCTTTTTGCTTTTTCATATATATTTTTATAGGATTAGGTATGATCGGGCTTTAAAGCTTATTATTTAATTTTCTTATATTTATTTTTTCA-TTTTTTTTAAATTTTGAATTGCAGTAATGATACTATGGTATTGTAGAAAGTTTATATTAATTCTG-------TATATAGTTTTCGGTTCTTGAAGAGAATATAAATGTCCGTCATTTTTTGTAATGTAATTAATCAAATGAATTCCCTTTTCATACCAGATTTTTACAAAATAAACTTGGTTTCTTATGTTGATATCTTCATTGTAAAATATGGGTGCTGATAAGAATGTTTT-ATCGTTAAGAGGTGGATGAGCCTTGAAAACTT
gi|2 : CTTGAAAACTTGATTTCTTTTACATACAAACTTCCACAGACAGAAAATTTTGTTCAATCTAAAATGTTTTTgatttcttttacatacaaacttccacagacagaaaattttgttcaatctaaaatgttttt
gi|20 : cactgtttaaactggtaatcaaacctagtttatattatattgtattatattgtaattattatcttttatacaataatgtatcttggagatatctgaaaaggggggggggggggttgaggaagggagtttcaaacatgcacgttcatcaaaagtgtcttgtatacaaaactaagtaagtatatcgtgaaacaattcccaagttttcaaaaacaaattgtatttgttttcagtaatagatatttctttatatgttttatataaaagttgaagtctgagctggagtgttttaaaatttaaattctttttcgagcatctacaatagtatatataatattttgtctcaactgaatgagctgaattattttacttatattcttatcataaattccaaaaataaatgatttatgttttaatggaaatggggtacttttgatggacatccagtcttgtaaaatgtgtagtatattttatgtttctttacattcccgcaataaatgatagattgtctcggtggtagttgagcgaaatgaacacagtggactttccagtagttttatcttatgtagaattatttgttgccagtttattatgactgatccgtgattgaaaccactgtaatgttgtatcttttgttatcaaatatggccatgaaaacactgttttccaaattaattcatcaagattttatgtattattccatgatgtttttccactaggaatttcatagttatgattcaaaataagatacatatcttgaaaacctttttgctttttcatatatatttttataggattaggtatgatcgggctttaaagcttattatttaattttcttatatttattttttcattttttttaaattttgaattgcagtaatgatactatggtattgtagaaagtttatattaattctgtatatagttttcggttcttgaagagaatataaatgtccgtcattttttgtaatgtaattaatcaaatgaattcccttttcataccagatttttacaaaataaacttggtttcttatgttgatatcttcattgtaaaatatgggtgctgataagaatgttttatcgttaagaggtggatgagcAGAGAAATAATATTCTATGCTTGAAATTGTATATGATCTCACTTT--TATTCAATATTCA-CACATTGTTTCCATGCA
gi|21 : cagacttttcttatcctccccgtttcatgctgtatgaggggtcgatacagcttacaataggtgcacatataaaATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCCTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------------------AGGGGGAGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCa
gi|22 : TGTCTCTGAACTAACACACTCATTATGTAAATTATATGTAAATTTAATAACTTATTCTTAAAATACATAGATAACCCGTCACTTTTTCTCCTAGCTTTCCGGTTACATTTAAGACTAGGGCAACTTAAATAT-TATACCCGTc
gi|24 : TTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGTAGAGATAATGGGAGATAACTGAAAA--A---------------AG----GGG--GGGGGGGGGG
gi|25 : ATTGATCCGTGATTGAAACCACTGTAATGTTGCATCTTTTGTTATCAAATATGGCAATGAAAACACTGTTTTCCAAATTGCTTCATCAA-AATTATATGTTTTATTCCATGA-ATTTTTgg
gi|3 : AAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTT----------------TT-CAAACATGCAC---TACATCAAACGTGTCTTT---A--TATGCAGAAT-T-AAGAAA------GTATGTCATGAAACAATTCCCAAGTTTTCAAAAACATACTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CAAACA--T----TCCAAA--AATAAATGATTTTT------GTTCTAATGGAAATGGGATATTTTTT-ATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAACAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTATTTGTTGCCAGTATATTATGATTGATCTGTGATTGAAACCACTGTAATGTTGTATTTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATGATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAATATAAGATACATGT-CTTGAA----TACCTTTTCTCTTTTTCATGTATATTTTAATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTCA-TTTTTTTTAAATTTTGAATTGCGGTAATGATACTATGATATTGTAGAAAGTATATATTAGTACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATAAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTGTATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCATTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTCTTGTTATATCTAAAATGTTTTTAGCTAG
gi|4 : AGAGAAAAAATATTCTATCATTGAAATTGTATATGTTTTCACTTT--CATTTTATATTAA-CACATTGCTTTAATGCACTGTTTAAACTGGTAATTAAACCTAGT-------AAAT---ATTATATAGTAATTATTATCCTTTATATAATA------------TGAGAGTTAACTGAAAA--AAAGGAATCGATGGTTGG----GGG--GGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGAAAGCGAAGGAAGGGGGTTCTCTG-GCTTGAAGCTTTTGTTCTCGTTTT---GATT-TT-CAAACATGCACT--TTCATCAAAAGTGTC-TT---A--TATACAAAATATAAAGTAAATATATGTATGCCGTGAAACAATTCCCAAGTTTTTAAAAACAAAATGTATCTGTTTTCAGTGATAGATATTTCATTTTATGTTTTATATGAACGTTGAAGTCTATGCTGGA---GTATTTTAAAATTTAATTT-ATTTTT-GAGCATCTACAATTGTATT-------TATAATATTTTGTCCCTAACTGAATTAGCTGGGTTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATATATGATTTTT------GTTGTAATGAAAATGGGATACTTTTG-ATCGACATCCAATCTTGCAAAATGTGTAGTTTTTTTTGTGTGTTTTTTACA-TTCCCACAA--TAAACGATATATTGTCCTGGTG---AATGAGCAAAATGAACGTAGTGGACTGTCGAGTAGTTATATCTTAAGTAGAATATTGTTTGAAGCCATAATATTATAATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATC-------------AAAACACTGTTTTCCAAATTGCTTTACCAA-AA---------TTATTCCATGATGTTTTTTC--ACTAGGAATTTCATTGTT---TTTATTCAAGGTAAGATACATAT-ATTGAA----TACCGTTTTTCTTTTTTATGTATATTTTTATAGGGTTAGGTAAGATCGGGCTTTGAAGCTC-TTATTT--TTTTAT--T-----CTTTTTAATTTT
gi|5 : aggaacataccctcacacagcttacaataagtgcacatataaaTTTTTCATTTGTTTTTAAATTTTGAATTGCAGTAATGATAATGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCGAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTCAAATATTGGTGCTGATAAAAATGTTTT-ATCCTTCATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCC---ACGTGTTTGTTACACTTGAATA---GATTTCTTTTACATACATATTTCCACAGACAGAGACTTTTGTTATATCTAGAATGTTTTTAACTTAGCTAGCATAATTGC-TTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATTTATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATTTTTTCACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTCTGAACTAACAGGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCACTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATAACCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|6 : aGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCATGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACA--GTTTTCCAAATTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAGTATAAGATAAATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTATGATAGGGTTAGGTATGATCAGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTAATTTTTTTTTTAATTTTGAATTGCAGTAATGATACTGTGGAATTGTAGACAGTTTATATTAATGCTGTATATTATATATATTTTTCAATTCTTGAAGAGAATATACATGTCTGTCATCTTTTGTAATGTTGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAACAATGTTTTAATCGTTAATAGGTGGATGAGCCTTTAAAATTCCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAATTTTTGTTAAATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGC-TTTTTTCTAAAATAAGTCTCC
gi|7 : TTACATACATATTTCCACAGACAGAAACCTTCGTTATATCTTAAATGTTTCTAACTAGGCTAGCATAATTGCTTTT-TTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTACATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTATACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAAGTAACACGCTCATTCT---------TTG---ATTTAATAACTAATTCTTAAAATAGGTAGATACACTGCCGCTTTTTCTCCTAACCCTCCGTTTAAATGTAGGACGTGGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTAATGTTCGTCCGTga
gi|8 : TTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGAA---TAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTT----------------TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-TAGTAA------GTATGTCATGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTCTGTATGTTTTATATAAAAGT------CTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCT--AACTGAATGAGCTGGATTATTTTACTTCTATTCTTAA-CATACA--T----TCCAAA--AGTAAATGATTTTT------GTTCTAATGGAAATGGGATATTTTTT-ATGGACATCCAGTCTTTCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TA
gi|9 : TATTCTCCACGTGAAATTGTATATGTTCTCACTTTTTCATTCAATATTCA-CACATTGCTTTCATGCAATGTTTAAACTAGTAGTTAAACCTAGT-------AAAT---ATTATATTTTAATTATTATCCT----ACAATAAAGT----AT-CTGGAAGATAACTGAAAA--A---------------AG----AGG--GGAA------TAAGGGA----GGGTT--------------------------TTTTCTG-GCTTGAAGCTTTTGTTCTCG--TTTC-GA-T-TTTCAAACATGCATG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTT-TATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAGATT-ATTGTTCGAGTAACTACAATAGTATATAATGATTATAATATTTTGCCTCTCACATAATGAGCTGGACTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|23 ): GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGAGTAAAGATAACGTCACGTTTAAAGCTAATGAAATATCGATCTATTTGAAATATTATGTTTAATCAATATATCAAAACAATAAGCAAACTATA
Unaligned ( gi|26 ): ATCATCTTGCTTATATTACATGTAAGAGTTCTAACAGAAATGGGGTGTGGTGGTGGAGGGGGGGGGGGGGGGGGGGGGGGAGGGGAAAG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 1111111 333333333333333333333333 44444444444444444444444444 7777777777777777 111111 111111 1111111 1111 111111 111 1111 22222 2222222 111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 333333333 111 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
lowQualScore : 1 55 1 0 11 4 4 4444444 777 8888 4 444444444444444444444444 66 0 0 555 8888 11111111111111111111111111 4 9999999999999999 4 66 1 0 444444 77 5 444444 5 1 0 777 4 4444444 5 77 2222 77 1 666666 88 5 5 0 77 3 0 0 1 4 0 5 1 1 99 111 1 6 4444 3 1 0 3 0 00000 7 1111111 6 0 000 7 7 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 222222222 444 5 0 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666
lowQualScore : . .. . . .. . . ....... ... .... . ........................ .. . . ... .... .......................... . ................ . .. . . ...... .. . ...... . . . ... . ....... . .. .... .. . ...... .. . . . .. . . . . . . . . . .. ... . . .... . . . . . ..... . ....... . . ... . . ................................................................................................................. ......... ... . . ..........................................................................................................
lowQualScore : 2 22 0 8 00 6 4 4444444 888 5555 0 888888888888888888888888 11 1 1 999 5555 55555555555555555555555555 0 4444444444444444 4 11 3 1 666666 22 0 444444 4 0 1 888 4 4444444 0 99 1111 99 4 444444 77 7 7 1 99 9 4 7 7 3 7 7 9 7 22 777 0 7 2222 2 0 8 2 8 00000 3 7777777 7 8 000 3 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 000000000 000 2 8 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
consensus : AGAGAAATAATATTCTACGNTTGAAATTGTATATGTTCTCACTTT--CATTCGATATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTTCTCG--TT---GA-T-TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGGGATATTTTTN-ATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAANATAAGATACATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTTTNATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGCTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCGCTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATACCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
Reference ( family-2706 ) : AGAGAAATAATATTCTACGNTTGAAATTGTATATGTTCTCACTTT--CATTCGATATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTTCTCG--TT---GA-T-TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGGGATATTTTTN-ATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAANATAAGATACATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTTTNATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGCTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCGCTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATACCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|1 : AGAGAAATAGTATT----GATTGAAATTGTATATGTTTTCACTTT--CATTCAATATTCA-CACACTGCTTTCATGCGTTGTTTTAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTAGCCTTTATACAATAATAT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGGTGGGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTT----------------TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-GAGTAA------GTATGTTCTGAAACAATTCCCAAGTTTTCAAAAAAATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGACGTCTGAGCTGGA---GTGTTTTAAACTTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTTGATTATTTTACTTTTATTCTTAT-CATACA--T----TCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGAGATATTTTTA-ATGGACATCCAGTCTTGCAAAATGTGTAGTACTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTTGGTGGTAGATGAGCAAAAAGAACACAGTGGACTATCCAGTAGTTTTATCTGATGTAGAAAATTATTTGTTGCCAGTATATTATGATTGATCCGTGGTTGAAACCACTTTAATGTTGTATTTTTTGTTATCAAATATGGCCATGAAAACAATGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTGATTCCATGATGTTTTTCA--ACTAGGAATTTCATTGTT---ATGATTCAATATAAGATACATAT-CTTGAA----TACCTTTTCTCTTTTTCATGTATATTTTGATAGGATTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTAATAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAATAATGATACTGTGGTATTATAGAAAGTTTATATAAATATTG-------TATATTGTTTTTAATTATTGAAGAGAATATAAATGTCCGTTATCTTTT-TAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTTCTATTTTTATATATTCATTGTCAAATATTGGTGCTGATAAGAATATTTT-ATCATTTATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACATGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAAAGTTTTAAGCTAGGCTAACATAATTGTTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGTCGTTTTTCCTCCTAGCCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATTTGTATACCCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|10 : TTACTTACATT--TATTCATAAAAGTAAAATCCAGATCAATAAACGTTTTTTTCCTTTGTTATGATGTAAAT--------------TAAATATCCACTCT--CAAA--GAACA-TATTTTATGTGT-TCCTTCACAATTCCC-CAACGTGCATGGAAAATTGTCTCTGTGATGGATGAACTGAATGCACACAGTGGACTATCGAGTA-TTTTATCTTATAAAGGAGATTGTTTGTTGCTATGATGTTATGATTGATCCATGTCTGGAACTACTGCAGTGTTGCATCTTTTGATGTTTTATATAATCATTAAAGTAGTGTTTT-CGAGTTG---GGTCACTGATTTTATGGTTTAGTTCATAAACTTTCGCCCAAGCAGGCATGTGATTGTTTTCAGGGATAAAAACAAAATGCATATAC--GAAGATGTACC----------TTCA--TATATTTTTATACGG
gi|11 : aataggttaaatgaagCACTTGATTA---GATTTCTTTTACATACCTATTTCCACAGACAGAAAGTTTTGTTATATCTAAAAAAATTTTAACTAAGCTAGCATAATTTCTTTT-TTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATTTTTACACAATACAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCACTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCA
gi|12 : ACAATAATGA----AT-GTTGGAGATAACTGAAAGTTA---------------GGCACAGAA--AACGAAAATATGGGGGATGTTGGGGG--------------------------TTCTCTG-ACATTACGCTTTTGCTCTCG--TTCGCAG-T-TT-TAAACATATATGATTGCTTGTAA--TGTCTTT--------TACAAAA--T-AAGTTG------GTATATC--------ATTCCCAAGTTTTCAAAAACATA---TA-----TTTCAGAAATATATATTTATTTGTATGTTCTGTAC----------GTCTGAGCTGGAATTGTGTT---AAATTTAAATCAACTTTTTGAATAT---CAATA-TGTA-------TTTAA------G-CTTTACTTGGATGAGCTCGA
gi|13 : ttaaatatacaaatgatgaacaatgtcacgtgctttaattgttttgtagtagatgcaatatagcaaataggccattgtgttttgatcgaaTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATGTACAATAATATA-------TGTGATATTTTGTCTCTCACTGAATGAGCTGGATTATTTTACTTATATTCT-AT-CATACA--T----TCCAAA--AATAAATGATTTTT------GTCCTAATGGAAATGACATATTTTTTTATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTGG-AT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATCTTTTGTTGCCATTATATTATGATTGATCAGTGATTGAAACCACTGTAATGTTGTagctcattcttccactat
gi|14 : TTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTA-------TATATAGTTTTTAATTCATGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAATTTTTTACAAATTAGGCTTGGTTTCCTATTTTCATATCTTTATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTAAATAAGTGGATGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTTATAA---GATTTCTGTTACATACATACTTCCACAGAGAGAAACTTTTGTTATATCTAAAATGTTTTTAACTA
gi|15 : AGAGAAATATTATTCTATGTTTGAAATGATATAAAT-CTCAATTC--GATACGATATTTAACACATCGCGTTCATACACTGTTTAC-CTGGTGATTAATCCTGAT-------ATAT---AATATATTGTAATTATTATCCTTTATACAATAATGT----TT-CTTGGAGATAATTGAAAA--T---------------GG----G
gi|16 : agactcctttttatcccctccgtcttaagctgtatgaaggatcgaagaggaacatattctcattgagcttacaataagtgcattatacaagTAAGGGA----GGGGG--------------------------TTCTCTG-GCGTGAAACCTCTGTTCTCA--TTTT-GA-TCTT-CAAACATGCATG--TTCATCAAAAGTGTCTTTTTAAGTTATACAAAAT-T-AGTTAA------GTATGTCAAGAAACGATTCCCAAGTTTTCAAAAACATATTGTTTTTGTTTTCAGTGATAGATACTTCaaaga
gi|17 : gaaagggaaaaaaaTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTTAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CAT
gi|18 : TACATACTTCCACAGACAGAAACTTTTGTTAAATCTAAAATGTTTT-AGCTATGCTAGCATAATTGCTTTTTTTCTAAAAGCAGTCTCTTAA-CCATGTTGCTTTTAATGCTGTTATATATGCAAACATTTTAGTCATTTTCAGACAATCATCGACATTATCTTTATACAATACGGTA
gi|19 : TTCA-CACATTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTGGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------AG----GGG--AA--------TAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGT---------------T-TT-CAAACATGCACG--TACATCA
gi|2 : CACTGTTTAAACTGGTAATCAAACCTAGTTTATATTATATTGTATTATATTGTAATTATTATCTTTTATACAATAATGT----AT-CTTGGAGATATCTGAAAA------------------------------GGGGGGGGG-----------GGGGG--------------------------TT----GAG---GAAG-----------G-------GAGT-TT-CAAACATGCACG--TTCATCAAAAGTGTCTT----G--TATACAAAAC-T-AAGTAA------GTATATCGTGAAACAATTCCCAAGTTTTCAAAAACAAATTGTATTTGTTTTCAGTAATAGATATTTCTTTATATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-CTTTTTCGAGCATCTACAATAGTATA-------TATAATATTTTGTCTC-AACTGAATGAGCTGAATTATTTTACTTATATTCTTAT-CATAAA--T----TCCAAA--AATAAATGATTTAT------GTTTTAATGGAAATGGGGTACTTTTG-ATGGACATCCAGTCTTGTAAAATGTGTAGTATATTTTATGT-TTCTTTACA-TTCCCGCAA--TAAATGATAGATTGTCTCGGTGGTAGTTGAGCGAAATGAACACAGTGGACTTTCCAGTAGTTTTATCTTATGTAGAA--TTATTTGTTGCCAGTTTATTATGACTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAATTAATTCATCAA-GATTTTATGTATTATTCCATGATGTTTTTCC--ACTAGGAATTTCATAGTT---ATGATTCAAAATAAGATACATAT-CTTGAA----AACCTTTTTGCTTTTTCATATATATTTTTATAGGATTAGGTATGATCGGGCTTTAAAGCTTATTATTTAATTTTCTTATATTTATTTTTTCA-TTTTTTTTAAATTTTGAATTGCAGTAATGATACTATGGTATTGTAGAAAGTTTATATTAATTCTG-------TATATAGTTTTCGGTTCTTGAAGAGAATATAAATGTCCGTCATTTTTTGTAATGTAATTAATCAAATGAATTCCCTTTTCATACCAGATTTTTACAAAATAAACTTGGTTTCTTATGTTGATATCTTCATTGTAAAATATGGGTGCTGATAAGAATGTTTT-ATCGTTAAGAGGTGGATGAGCCTTGAAAACTT
gi|2 : CTTGAAAACTTGATTTCTTTTACATACAAACTTCCACAGACAGAAAATTTTGTTCAATCTAAAATGTTTTTgatttcttttacatacaaacttccacagacagaaaattttgttcaatctaaaatgttttt
gi|20 : cactgtttaaactggtaatcaaacctagtttatattatattgtattatattgtaattattatcttttatacaataatgtatcttggagatatctgaaaaggggggggggggggttgaggaagggagtttcaaacatgcacgttcatcaaaagtgtcttgtatacaaaactaagtaagtatatcgtgaaacaattcccaagttttcaaaaacaaattgtatttgttttcagtaatagatatttctttatatgttttatataaaagttgaagtctgagctggagtgttttaaaatttaaattctttttcgagcatctacaatagtatatataatattttgtctcaactgaatgagctgaattattttacttatattcttatcataaattccaaaaataaatgatttatgttttaatggaaatggggtacttttgatggacatccagtcttgtaaaatgtgtagtatattttatgtttctttacattcccgcaataaatgatagattgtctcggtggtagttgagcgaaatgaacacagtggactttccagtagttttatcttatgtagaattatttgttgccagtttattatgactgatccgtgattgaaaccactgtaatgttgtatcttttgttatcaaatatggccatgaaaacactgttttccaaattaattcatcaagattttatgtattattccatgatgtttttccactaggaatttcatagttatgattcaaaataagatacatatcttgaaaacctttttgctttttcatatatatttttataggattaggtatgatcgggctttaaagcttattatttaattttcttatatttattttttcattttttttaaattttgaattgcagtaatgatactatggtattgtagaaagtttatattaattctgtatatagttttcggttcttgaagagaatataaatgtccgtcattttttgtaatgtaattaatcaaatgaattcccttttcataccagatttttacaaaataaacttggtttcttatgttgatatcttcattgtaaaatatgggtgctgataagaatgttttatcgttaagaggtggatgagcAGAGAAATAATATTCTATGCTTGAAATTGTATATGATCTCACTTT--TATTCAATATTCA-CACATTGTTTCCATGCA
gi|21 : cagacttttcttatcctccccgtttcatgctgtatgaggggtcgatacagcttacaataggtgcacatataaaATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCCTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------------------AGGGGGAGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCa
gi|22 : TGTCTCTGAACTAACACACTCATTATGTAAATTATATGTAAATTTAATAACTTATTCTTAAAATACATAGATAACCCGTCACTTTTTCTCCTAGCTTTCCGGTTACATTTAAGACTAGGGCAACTTAAATAT-TATACCCGTc
gi|24 : TTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGTAGAGATAATGGGAGATAACTGAAAA--A---------------AG----GGG--GGGGGGGGGG
gi|25 : ATTGATCCGTGATTGAAACCACTGTAATGTTGCATCTTTTGTTATCAAATATGGCAATGAAAACACTGTTTTCCAAATTGCTTCATCAA-AATTATATGTTTTATTCCATGA-ATTTTTgg
gi|3 : AAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTT----------------TT-CAAACATGCAC---TACATCAAACGTGTCTTT---A--TATGCAGAAT-T-AAGAAA------GTATGTCATGAAACAATTCCCAAGTTTTCAAAAACATACTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CAAACA--T----TCCAAA--AATAAATGATTTTT------GTTCTAATGGAAATGGGATATTTTTT-ATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAACAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTATTTGTTGCCAGTATATTATGATTGATCTGTGATTGAAACCACTGTAATGTTGTATTTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATGATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAATATAAGATACATGT-CTTGAA----TACCTTTTCTCTTTTTCATGTATATTTTAATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTCA-TTTTTTTTAAATTTTGAATTGCGGTAATGATACTATGATATTGTAGAAAGTATATATTAGTACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATAAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTGTATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCATTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTCTTGTTATATCTAAAATGTTTTTAGCTAG
gi|4 : AGAGAAAAAATATTCTATCATTGAAATTGTATATGTTTTCACTTT--CATTTTATATTAA-CACATTGCTTTAATGCACTGTTTAAACTGGTAATTAAACCTAGT-------AAAT---ATTATATAGTAATTATTATCCTTTATATAATA------------TGAGAGTTAACTGAAAA--AAAGGAATCGATGGTTGG----GGG--GGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGAAAGCGAAGGAAGGGGGTTCTCTG-GCTTGAAGCTTTTGTTCTCGTTTT---GATT-TT-CAAACATGCACT--TTCATCAAAAGTGTC-TT---A--TATACAAAATATAAAGTAAATATATGTATGCCGTGAAACAATTCCCAAGTTTTTAAAAACAAAATGTATCTGTTTTCAGTGATAGATATTTCATTTTATGTTTTATATGAACGTTGAAGTCTATGCTGGA---GTATTTTAAAATTTAATTT-ATTTTT-GAGCATCTACAATTGTATT-------TATAATATTTTGTCCCTAACTGAATTAGCTGGGTTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATATATGATTTTT------GTTGTAATGAAAATGGGATACTTTTG-ATCGACATCCAATCTTGCAAAATGTGTAGTTTTTTTTGTGTGTTTTTTACA-TTCCCACAA--TAAACGATATATTGTCCTGGTG---AATGAGCAAAATGAACGTAGTGGACTGTCGAGTAGTTATATCTTAAGTAGAATATTGTTTGAAGCCATAATATTATAATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATC-------------AAAACACTGTTTTCCAAATTGCTTTACCAA-AA---------TTATTCCATGATGTTTTTTC--ACTAGGAATTTCATTGTT---TTTATTCAAGGTAAGATACATAT-ATTGAA----TACCGTTTTTCTTTTTTATGTATATTTTTATAGGGTTAGGTAAGATCGGGCTTTGAAGCTC-TTATTT--TTTTAT--T-----CTTTTTAATTTT
gi|5 : aggaacataccctcacacagcttacaataagtgcacatataaaTTTTTCATTTGTTTTTAAATTTTGAATTGCAGTAATGATAATGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCGAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTCAAATATTGGTGCTGATAAAAATGTTTT-ATCCTTCATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCC---ACGTGTTTGTTACACTTGAATA---GATTTCTTTTACATACATATTTCCACAGACAGAGACTTTTGTTATATCTAGAATGTTTTTAACTTAGCTAGCATAATTGC-TTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATTTATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATTTTTTCACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTCTGAACTAACAGGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCACTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATAACCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|6 : aGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCATGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACA--GTTTTCCAAATTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAGTATAAGATAAATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTATGATAGGGTTAGGTATGATCAGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTAATTTTTTTTTTAATTTTGAATTGCAGTAATGATACTGTGGAATTGTAGACAGTTTATATTAATGCTGTATATTATATATATTTTTCAATTCTTGAAGAGAATATACATGTCTGTCATCTTTTGTAATGTTGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAACAATGTTTTAATCGTTAATAGGTGGATGAGCCTTTAAAATTCCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAATTTTTGTTAAATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGC-TTTTTTCTAAAATAAGTCTCC
gi|7 : TTACATACATATTTCCACAGACAGAAACCTTCGTTATATCTTAAATGTTTCTAACTAGGCTAGCATAATTGCTTTT-TTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTACATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTATACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAAGTAACACGCTCATTCT---------TTG---ATTTAATAACTAATTCTTAAAATAGGTAGATACACTGCCGCTTTTTCTCCTAACCCTCCGTTTAAATGTAGGACGTGGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTAATGTTCGTCCGTga
gi|8 : TTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGAA---TAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTT----------------TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-TAGTAA------GTATGTCATGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTCTGTATGTTTTATATAAAAGT------CTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCT--AACTGAATGAGCTGGATTATTTTACTTCTATTCTTAA-CATACA--T----TCCAAA--AGTAAATGATTTTT------GTTCTAATGGAAATGGGATATTTTTT-ATGGACATCCAGTCTTTCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TA
gi|9 : TATTCTCCACGTGAAATTGTATATGTTCTCACTTTTTCATTCAATATTCA-CACATTGCTTTCATGCAATGTTTAAACTAGTAGTTAAACCTAGT-------AAAT---ATTATATTTTAATTATTATCCT----ACAATAAAGT----AT-CTGGAAGATAACTGAAAA--A---------------AG----AGG--GGAA------TAAGGGA----GGGTT--------------------------TTTTCTG-GCTTGAAGCTTTTGTTCTCG--TTTC-GA-T-TTTCAAACATGCATG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTT-TATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAGATT-ATTGTTCGAGTAACTACAATAGTATATAATGATTATAATATTTTGCCTCTCACATAATGAGCTGGACTA
blockSeqs : T AT T TT G A TTATATT TGT AGAG A AAAGGAATCGATGGTTGG . ATA TGTT GGGGGGGGGAAAGCGAAGGAAGGGGG A CTCGTTCGCAGT T AT G TTAAGT TA A ATATAT A T ATT A TAATGAT T AG AAAA TC C TCCTTT TT G A CG G T G T T A CA TTC A A GATG T T A ATTTA T TATATTA A CTT T T NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN GTAAATTAT TAA G NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
blockSeqs : A AT C . A . . . . . TTAGGCACA . GGG . . . CTCATTTTGATC . . T G T . . G T . . . . . . . T . G . . . A A C . T T . . A . . T T G . T . . . T T NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN . . N NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
blockSeqs : A AT A . T . . . . . TGG . AGG . . . CTCGTTTTGATT . . A A C . . A T . . . . . . . T . T . . . A A C . A T . . T . . G A G . T . . . T T NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN . . .
blockSeqs : CC C . A . . . . . AAG . GGG . . . CTCGTTTCGAT . . T A T . . G C . . . . . . . T . G . . . T A C . A T . . G . . T T . . . . . . . . . .
blockSeqs : . . . . . AAG . GGG . . . GGAGT . . A A C . . A A . . . . . . . T . T . . . A A C . A T . . T . . . G . . . . . .
blockSeqs : . . . . . AGG . . . . . T . . T A C . . G T . . . . . . . T . . . . . . . . . . . .
blockSeqs : . . . . . AAG . . . . . . . . A . . . . . T . . . .
blockSeqs : . . . . . A . . . . . . . . A . . . .
blockSeqs : . . . . . .
blockSeqCons : AT ** CTCGTTGAT*******
originalCons : AGAGAAATAATATTCTACGNTTGAAATTGTATATGTTCTCACTTT--CATTCGATATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTTCTCG--TT---GA-T-TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGGGATATTTTTN-ATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAANATAAGATACATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTTTNATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGCTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCGCTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATACCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
finalCons : AGAGAAATAATATTCTATGNTTGAAATTGTATATGTTCTCACTTT--CATTCGATATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTTCTCGTTGAT-------TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGGGATATTTTTN-ATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAANATAAGATACATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTTTNATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGCTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCGCTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATACCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|23 ): GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGAGTAAAGATAACGTCACGTTTAAAGCTAATGAAATATCGATCTATTTGAAATATTATGTTTAATCAATATATCAAAACAATAAGCAAACTATA
Unaligned ( gi|26 ): ATCATCTTGCTTATATTACATGTAAGAGTTCTAACAGAAATGGGGTGTGGTGGTGGAGGGGGGGGGGGGGGGGGGGGGGGAGGGGAAAG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 1111111 333333333333333333333333 44444444444444444444444444 7777777777777777 111111 111111 1111111 1111 111111 111 1111 22222 2222222 111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 333333333 111 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
lowQualScore : 1 0 1 0 11 4 4 4444444 777 8888 4 444444444444444444444444 66 0 0 555 8888 11111111111111111111111111 4 9999999999999999 4 66 1 0 444444 77 5 444444 5 1 0 777 4 4444444 5 77 2222 77 1 666666 88 5 5 0 77 3 0 0 1 4 0 5 1 1 99 111 1 6 4444 3 1 0 3 0 00000 7 1111111 6 0 000 7 7 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 222222222 444 5 0 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666
lowQualScore : . . . . .. . . ....... ... .... . ........................ .. . . ... .... .......................... . ................ . .. . . ...... .. . ...... . . . ... . ....... . .. .... .. . ...... .. . . . .. . . . . . . . . . .. ... . . .... . . . . . ..... . ....... . . ... . . ................................................................................................................. ......... ... . . ..........................................................................................................
lowQualScore : 2 6 0 8 00 6 4 4444444 888 5555 0 888888888888888888888888 11 1 1 999 5555 55555555555555555555555555 0 4444444444444444 4 11 3 1 666666 22 0 444444 4 0 1 888 4 4444444 0 99 1111 99 4 444444 77 7 7 1 99 9 4 7 7 3 7 7 9 7 22 777 0 7 2222 2 0 8 2 8 00000 3 7777777 7 8 000 3 3 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 000000000 000 2 8 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
consensus : AGAGAAATAATATTCTACGNTTGAAATTGTATATGTTCTCACTTT--CATTCGATATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTTCTCG--TT---GA-T-TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGGGATATTTTTN-ATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAANATAAGATACATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTTTNATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGCTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCGCTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATACCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
Reference ( family-2706 ) : AGAGAAATAATATTCTATGNTTGAAATTGTATATGTTCTCACTTT--CATTCGATATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTTCTCG--TT---GA-T-TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGGGATATTTTTN-ATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAANATAAGATACATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTTTNATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGCTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCGCTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATACCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|1 : AGAGAAATAGTATT----GATTGAAATTGTATATGTTTTCACTTT--CATTCAATATTCA-CACACTGCTTTCATGCGTTGTTTTAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTAGCCTTTATACAATAATAT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGGTGGGGGGGGGGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTT----------------TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-GAGTAA------GTATGTTCTGAAACAATTCCCAAGTTTTCAAAAAAATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGACGTCTGAGCTGGA---GTGTTTTAAACTTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTTGATTATTTTACTTTTATTCTTAT-CATACA--T----TCCAAA--AATAAACGATTTTT------GTTCTAATGGAAATGAGATATTTTTA-ATGGACATCCAGTCTTGCAAAATGTGTAGTACTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTTGGTGGTAGATGAGCAAAAAGAACACAGTGGACTATCCAGTAGTTTTATCTGATGTAGAAAATTATTTGTTGCCAGTATATTATGATTGATCCGTGGTTGAAACCACTTTAATGTTGTATTTTTTGTTATCAAATATGGCCATGAAAACAATGTTTTCCAAGTTGCTTCGTCAA-AATTATATGTTTGATTCCATGATGTTTTTCA--ACTAGGAATTTCATTGTT---ATGATTCAATATAAGATACATAT-CTTGAA----TACCTTTTCTCTTTTTCATGTATATTTTGATAGGATTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTAATAT-----TTTTTTCATTTTTTTTTAAATTTTGAATTGCAATAATGATACTGTGGTATTATAGAAAGTTTATATAAATATTG-------TATATTGTTTTTAATTATTGAAGAGAATATAAATGTCCGTTATCTTTT-TAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTTCTATTTTTATATATTCATTGTCAAATATTGGTGCTGATAAGAATATTTT-ATCATTTATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACATGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTTTTGTTATATCTAAAAAGTTTTAAGCTAGGCTAACATAATTGTTTTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTACACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGTCGTTTTTCCTCCTAGCCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATTTGTATACCCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|10 : TTACTTACATT--TATTCATAAAAGTAAAATCCAGATCAATAAACGTTTTTTTCCTTTGTTATGATGTAAAT--------------TAAATATCCACTCT--CAAA--GAACA-TATTTTATGTGT-TCCTTCACAATTCCC-CAACGTGCATGGAAAATTGTCTCTGTGATGGATGAACTGAATGCACACAGTGGACTATCGAGTA-TTTTATCTTATAAAGGAGATTGTTTGTTGCTATGATGTTATGATTGATCCATGTCTGGAACTACTGCAGTGTTGCATCTTTTGATGTTTTATATAATCATTAAAGTAGTGTTTT-CGAGTTG---GGTCACTGATTTTATGGTTTAGTTCATAAACTTTCGCCCAAGCAGGCATGTGATTGTTTTCAGGGATAAAAACAAAATGCATATAC--GAAGATGTACC----------TTCA--TATATTTTTATACGG
gi|11 : aataggttaaatgaagCACTTGATTA---GATTTCTTTTACATACCTATTTCCACAGACAGAAAGTTTTGTTATATCTAAAAAAATTTTAACTAAGCTAGCATAATTTCTTTT-TTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATTTTTACACAATACAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAACTAACACGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCACTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCA
gi|12 : ACAATAATGA----AT-GTTGGAGATAACTGAAAGTTA---------------GGCACAGAA--AACGAAAATATGGGGGATGTTGGGGG--------------------------TTCTCTG-ACATTACGCTTTTGCTCTCG--TTCGCAG-T-TT-TAAACATATATGATTGCTTGTAA--TGTCTTT--------TACAAAA--T-AAGTTG------GTATATC--------ATTCCCAAGTTTTCAAAAACATA---TA-----TTTCAGAAATATATATTTATTTGTATGTTCTGTAC----------GTCTGAGCTGGAATTGTGTT---AAATTTAAATCAACTTTTTGAATAT---CAATA-TGTA-------TTTAA------G-CTTTACTTGGATGAGCTCGA
gi|13 : ttaaatatacaaatgatgaacaatgtcacgtgctttaattgttttgtagtagatgcaatatagcaaataggccattgtgttttgatcgaaTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATGTACAATAATATA-------TGTGATATTTTGTCTCTCACTGAATGAGCTGGATTATTTTACTTATATTCT-AT-CATACA--T----TCCAAA--AATAAATGATTTTT------GTCCTAATGGAAATGACATATTTTTTTATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTGG-AT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATCTTTTGTTGCCATTATATTATGATTGATCAGTGATTGAAACCACTGTAATGTTGTagctcattcttccactat
gi|14 : TTGCAGTAATGATACTGTGGTATTGTAGAAAGTTTATATTAATACTA-------TATATAGTTTTTAATTCATGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCAAATGTATTCCCTTTTCATACCAATTTTTTACAAATTAGGCTTGGTTTCCTATTTTCATATCTTTATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCGTAAATAAGTGGATGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTTATAA---GATTTCTGTTACATACATACTTCCACAGAGAGAAACTTTTGTTATATCTAAAATGTTTTTAACTA
gi|15 : AGAGAAATATTATTCTATGTTTGAAATGATATAAAT-CTCAATTC--GATACGATATTTAACACATCGCGTTCATACACTGTTTAC-CTGGTGATTAATCCTGAT-------ATAT---AATATATTGTAATTATTATCCTTTATACAATAATGT----TT-CTTGGAGATAATTGAAAA--T---------------GG----G
gi|16 : agactcctttttatcccctccgtcttaagctgtatgaaggatcgaagaggaacatattctcattgagcttacaataagtgcattatacaagTAAGGGA----GGGGG--------------------------TTCTCTG-GCGTGAAACCTCTGTTCTCA--TTTT-GA-TCTT-CAAACATGCATG--TTCATCAAAAGTGTCTTTTTAAGTTATACAAAAT-T-AGTTAA------GTATGTCAAGAAACGATTCCCAAGTTTTCAAAAACATATTGTTTTTGTTTTCAGTGATAGATACTTCaaaga
gi|17 : gaaagggaaaaaaaTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTTAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CAT
gi|18 : TACATACTTCCACAGACAGAAACTTTTGTTAAATCTAAAATGTTTT-AGCTATGCTAGCATAATTGCTTTTTTTCTAAAAGCAGTCTCTTAA-CCATGTTGCTTTTAATGCTGTTATATATGCAAACATTTTAGTCATTTTCAGACAATCATCGACATTATCTTTATACAATACGGTA
gi|19 : TTCA-CACATTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTGGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------AG----GGG--AA--------TAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGT---------------T-TT-CAAACATGCACG--TACATCA
gi|2 : CACTGTTTAAACTGGTAATCAAACCTAGTTTATATTATATTGTATTATATTGTAATTATTATCTTTTATACAATAATGT----AT-CTTGGAGATATCTGAAAA------------------------------GGGGGGGGG-----------GGGGG--------------------------TT----GAG---GAAG-----------G-------GAGT-TT-CAAACATGCACG--TTCATCAAAAGTGTCTT----G--TATACAAAAC-T-AAGTAA------GTATATCGTGAAACAATTCCCAAGTTTTCAAAAACAAATTGTATTTGTTTTCAGTAATAGATATTTCTTTATATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-CTTTTTCGAGCATCTACAATAGTATA-------TATAATATTTTGTCTC-AACTGAATGAGCTGAATTATTTTACTTATATTCTTAT-CATAAA--T----TCCAAA--AATAAATGATTTAT------GTTTTAATGGAAATGGGGTACTTTTG-ATGGACATCCAGTCTTGTAAAATGTGTAGTATATTTTATGT-TTCTTTACA-TTCCCGCAA--TAAATGATAGATTGTCTCGGTGGTAGTTGAGCGAAATGAACACAGTGGACTTTCCAGTAGTTTTATCTTATGTAGAA--TTATTTGTTGCCAGTTTATTATGACTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAATTAATTCATCAA-GATTTTATGTATTATTCCATGATGTTTTTCC--ACTAGGAATTTCATAGTT---ATGATTCAAAATAAGATACATAT-CTTGAA----AACCTTTTTGCTTTTTCATATATATTTTTATAGGATTAGGTATGATCGGGCTTTAAAGCTTATTATTTAATTTTCTTATATTTATTTTTTCA-TTTTTTTTAAATTTTGAATTGCAGTAATGATACTATGGTATTGTAGAAAGTTTATATTAATTCTG-------TATATAGTTTTCGGTTCTTGAAGAGAATATAAATGTCCGTCATTTTTTGTAATGTAATTAATCAAATGAATTCCCTTTTCATACCAGATTTTTACAAAATAAACTTGGTTTCTTATGTTGATATCTTCATTGTAAAATATGGGTGCTGATAAGAATGTTTT-ATCGTTAAGAGGTGGATGAGCCTTGAAAACTT
gi|2 : CTTGAAAACTTGATTTCTTTTACATACAAACTTCCACAGACAGAAAATTTTGTTCAATCTAAAATGTTTTTgatttcttttacatacaaacttccacagacagaaaattttgttcaatctaaaatgttttt
gi|20 : cactgtttaaactggtaatcaaacctagtttatattatattgtattatattgtaattattatcttttatacaataatgtatcttggagatatctgaaaaggggggggggggggttgaggaagggagtttcaaacatgcacgttcatcaaaagtgtcttgtatacaaaactaagtaagtatatcgtgaaacaattcccaagttttcaaaaacaaattgtatttgttttcagtaatagatatttctttatatgttttatataaaagttgaagtctgagctggagtgttttaaaatttaaattctttttcgagcatctacaatagtatatataatattttgtctcaactgaatgagctgaattattttacttatattcttatcataaattccaaaaataaatgatttatgttttaatggaaatggggtacttttgatggacatccagtcttgtaaaatgtgtagtatattttatgtttctttacattcccgcaataaatgatagattgtctcggtggtagttgagcgaaatgaacacagtggactttccagtagttttatcttatgtagaattatttgttgccagtttattatgactgatccgtgattgaaaccactgtaatgttgtatcttttgttatcaaatatggccatgaaaacactgttttccaaattaattcatcaagattttatgtattattccatgatgtttttccactaggaatttcatagttatgattcaaaataagatacatatcttgaaaacctttttgctttttcatatatatttttataggattaggtatgatcgggctttaaagcttattatttaattttcttatatttattttttcattttttttaaattttgaattgcagtaatgatactatggtattgtagaaagtttatattaattctgtatatagttttcggttcttgaagagaatataaatgtccgtcattttttgtaatgtaattaatcaaatgaattcccttttcataccagatttttacaaaataaacttggtttcttatgttgatatcttcattgtaaaatatgggtgctgataagaatgttttatcgttaagaggtggatgagcAGAGAAATAATATTCTATGCTTGAAATTGTATATGATCTCACTTT--TATTCAATATTCA-CACATTGTTTCCATGCA
gi|21 : cagacttttcttatcctccccgtttcatgctgtatgaggggtcgatacagcttacaataggtgcacatataaaATTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCCTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------------------AGGGGGAGGTAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCa
gi|22 : TGTCTCTGAACTAACACACTCATTATGTAAATTATATGTAAATTTAATAACTTATTCTTAAAATACATAGATAACCCGTCACTTTTTCTCCTAGCTTTCCGGTTACATTTAAGACTAGGGCAACTTAAATAT-TATACCCGTc
gi|24 : TTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGTAGAGATAATGGGAGATAACTGAAAA--A---------------AG----GGG--GGGGGGGGGG
gi|25 : ATTGATCCGTGATTGAAACCACTGTAATGTTGCATCTTTTGTTATCAAATATGGCAATGAAAACACTGTTTTCCAAATTGCTTCATCAA-AATTATATGTTTTATTCCATGA-ATTTTTgg
gi|3 : AAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTT----------------TT-CAAACATGCAC---TACATCAAACGTGTCTTT---A--TATGCAGAAT-T-AAGAAA------GTATGTCATGAAACAATTCCCAAGTTTTCAAAAACATACTGTATTTGTTTTCAGTGATAGATATTTCTTTGTATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCTCTAACTGAATGAGCTGGATTATTTTACTTATATTCTTAT-CAAACA--T----TCCAAA--AATAAATGATTTTT------GTTCTAATGGAAATGGGATATTTTTT-ATGGACATCCAGTCTTGCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TAAATGATAGATTGTCTCGGTGGTAGATGAACAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTATTTGTTGCCAGTATATTATGATTGATCTGTGATTGAAACCACTGTAATGTTGTATTTTTTGTTATCAAATATGGCCATGAAAACACTGTTTTCCAAGTTGCTTCGTCAA-AATGATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAATATAAGATACATGT-CTTGAA----TACCTTTTCTCTTTTTCATGTATATTTTAATAGGGTTAGGTATGATCGGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTCA-TTTTTTTTAAATTTTGAATTGCGGTAATGATACTATGATATTGTAGAAAGTATATATTAGTACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATAAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTGTATCTTCATTGTAAAATATTGGTGCTGATAAGAATGTTTT-ATCATTAATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAACTCTTGTTATATCTAAAATGTTTTTAGCTAG
gi|4 : AGAGAAAAAATATTCTATCATTGAAATTGTATATGTTTTCACTTT--CATTTTATATTAA-CACATTGCTTTAATGCACTGTTTAAACTGGTAATTAAACCTAGT-------AAAT---ATTATATAGTAATTATTATCCTTTATATAATA------------TGAGAGTTAACTGAAAA--AAAGGAATCGATGGTTGG----GGG--GGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGAAAGCGAAGGAAGGGGGTTCTCTG-GCTTGAAGCTTTTGTTCTCGTTTT---GATT-TT-CAAACATGCACT--TTCATCAAAAGTGTC-TT---A--TATACAAAATATAAAGTAAATATATGTATGCCGTGAAACAATTCCCAAGTTTTTAAAAACAAAATGTATCTGTTTTCAGTGATAGATATTTCATTTTATGTTTTATATGAACGTTGAAGTCTATGCTGGA---GTATTTTAAAATTTAATTT-ATTTTT-GAGCATCTACAATTGTATT-------TATAATATTTTGTCCCTAACTGAATTAGCTGGGTTATTTTACTTATATTCTTAT-CATACA--T----TCCAAA--AATATATGATTTTT------GTTGTAATGAAAATGGGATACTTTTG-ATCGACATCCAATCTTGCAAAATGTGTAGTTTTTTTTGTGTGTTTTTTACA-TTCCCACAA--TAAACGATATATTGTCCTGGTG---AATGAGCAAAATGAACGTAGTGGACTGTCGAGTAGTTATATCTTAAGTAGAATATTGTTTGAAGCCATAATATTATAATTGATCCGTGATTGAAACCACTGTAATGTTGTATCTTTTGTTATC-------------AAAACACTGTTTTCCAAATTGCTTTACCAA-AA---------TTATTCCATGATGTTTTTTC--ACTAGGAATTTCATTGTT---TTTATTCAAGGTAAGATACATAT-ATTGAA----TACCGTTTTTCTTTTTTATGTATATTTTTATAGGGTTAGGTAAGATCGGGCTTTGAAGCTC-TTATTT--TTTTAT--T-----CTTTTTAATTTT
gi|5 : aggaacataccctcacacagcttacaataagtgcacatataaaTTTTTCATTTGTTTTTAAATTTTGAATTGCAGTAATGATAATGTGGTATTGTAGAAAGTTTATATTAATACTG-------TATATAGTTTTTAATTCTTGAAGAGAATATAAATGTCCGTCATCTTTTGTAATGTCGTTGATCGAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTCAAATATTGGTGCTGATAAAAATGTTTT-ATCCTTCATAGGTGGGTGAGCCTTTAAAATTTCAATATGTGATTTTAAAACATCTTTCC---ACGTGTTTGTTACACTTGAATA---GATTTCTTTTACATACATATTTCCACAGACAGAGACTTTTGTTATATCTAGAATGTTTTTAACTTAGCTAGCATAATTGC-TTTTTTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTATTTATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATTTTTTCACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTCTGAACTAACAGGCTCATTAT---------ATG---ATTTAATAACTAATTCTTAAAATAGACAGATACACTGCCACTTTTCCTCCTAACCCTCCGTTTAAATTTAGGACGTGGGCAACTGAAATATGTATAACCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCAGTGTTCGTCCGT
gi|6 : aGATAGATTGTCTCGGTGGTAGATGAGCAAAATGAACACAGTGGACTATCCAGTAGTTTTATCTTATGTAGAAAATTGTTTGTTGCCAGTATATTATGATTGATCCATGATTGAAACCACTGTAATGTTGTATCTTTTGTTATCAAATATGGCCATGAAAACA--GTTTTCCAAATTGCTTCGTCAA-AATTATATGTTTTATTCCATGATGTTTTTCC--ACTAGGAATTTCATTGTT---ATGATTCAGTATAAGATAAATAT-CTTGAA----TACCTTTTTTCTTTTTCATGTATATTATGATAGGGTTAGGTATGATCAGACTTTGAAGCTTATTATTTGCTTTTATTAT-----TTTTTTAATTTTTTTTTTAATTTTGAATTGCAGTAATGATACTGTGGAATTGTAGACAGTTTATATTAATGCTGTATATTATATATATTTTTCAATTCTTGAAGAGAATATACATGTCTGTCATCTTTTGTAATGTTGTTGATCAAATGTATTCCCTTTTCATACCAGTTTTTTACAAAATAAGCTTGGTTTCCTATTTTTATATCTTCATTGTAAAATATTGGTGCTGATAACAATGTTTTAATCGTTAATAGGTGGATGAGCCTTTAAAATTCCAATATGTGATTTTAAAACATCTTTCCAAAAAGTGTTTGTTACACTTGATAA---GATTTCTTTTACATACATACTTCCACAGACAGAAATTTTTGTTAAATCTAAAATGTTTTTAGCTAGGCTAGCATAATTGC-TTTTTTCTAAAATAAGTCTCC
gi|7 : TTACATACATATTTCCACAGACAGAAACCTTCGTTATATCTTAAATGTTTCTAACTAGGCTAGCATAATTGCTTTT-TTCTAAAATAAGTCTCCTAAGCCATGTTGCTTTTAATGCTGTTACATATGCAAACATATTAGTCATTTTCAGATCACCATCTGCATAATCTTTATACAATACAGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCTGAAGTAACACGCTCATTCT---------TTG---ATTTAATAACTAATTCTTAAAATAGGTAGATACACTGCCGCTTTTTCTCCTAACCCTCCGTTTAAATGTAGGACGTGGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTAATGTTCGTCCGTga
gi|8 : TTCA-CACACTGCTTTCATGCACTGTTTAAACTGGTAGTTAAACCTAGT-------AAAT---ATTATATTGTAATTACTATCCTTTATACAATAATGT----AT-CTGGGAGATAACTGAAAA--A---------------GG----GGG--GGGGGAA---TAAGGGA----GGGGG--------------------------TTCTCTG-GCTTGAAGCTTTTGTT----------------TT-CAAACATGCACG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-TAGTAA------GTATGTCATGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTCTGTATGTTTTATATAAAAGT------CTGAGCTGGA---GTGTTTTAAAATTTAAATT-ATTTTTCGAGCATCTACAATAGTATA-------TGTAATATTTTGTCT--AACTGAATGAGCTGGATTATTTTACTTCTATTCTTAA-CATACA--T----TCCAAA--AGTAAATGATTTTT------GTTCTAATGGAAATGGGATATTTTTT-ATGGACATCCAGTCTTTCAAAATGTGTAGTATTTTTTGTGT-TTCTTTACA-TTCCCACAA--TA
gi|9 : TATTCTCCACGTGAAATTGTATATGTTCTCACTTTTTCATTCAATATTCA-CACATTGCTTTCATGCAATGTTTAAACTAGTAGTTAAACCTAGT-------AAAT---ATTATATTTTAATTATTATCCT----ACAATAAAGT----AT-CTGGAAGATAACTGAAAA--A---------------AG----AGG--GGAA------TAAGGGA----GGGTT--------------------------TTTTCTG-GCTTGAAGCTTTTGTTCTCG--TTTC-GA-T-TTTCAAACATGCATG--TACATCAAAAGTGTCTTT---A--TATACAAAAC-T-AAGTAA------GTATGTCGTGAAACAATTCCCAAGTTTTCAAAAACATATTGTATTTGTTTTCAGTGATAGATATTTCTTT-TATGTTTTATATAAAAGTTGAAGTCTGAGCTGGA---GTGTTTTAAAATTTAGATT-ATTGTTCGAGTAACTACAATAGTATATAATGATTATAATATTTTGCCTCTCACATAATGAGCTGGACTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|23 ): GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGAGTAAAGATAACGTCACGTTTAAAGCTAATGAAATATCGATCTATTTGAAATATTATGTTTAATCAATATATCAAAACAATAAGCAAACTATA
Unaligned ( gi|26 ): ATCATCTTGCTTATATTACATGTAAGAGTTCTAACAGAAATGGGGTGTGGTGGTGGAGGGGGGGGGGGGGGGGGGGGGGGAGGGGAAAG