lowQualScore : 1 444444444 33333 11 111111 11111111 222 11111111 111111 1 11
lowQualScore : 1 2 3 8 0 22 444444 222 888888888 444 11111 222 222 00 777777 99999999999999 222 8888888888888 7777 2 33 00000000 55 8888888 0 2 33 2 33 222 2 4 77777777 4 222222 4444 2 2 333 66 33 4 2 6 55
lowQualScore : . . . . . .. ...... ... ......... ... ..... ... ... .. ...... .............. ... ............. .... . .. ........ .. ....... . . .. . .. ... . . ........ . ...... .... . . ... .. .. . . . ..
lowQualScore : 7 4 6 5 8 11 444444 777 333333333 444 77777 777 777 22 666666 44444444444444 888 8888888888888 8888 5 44 77777777 99 1111111 4 9 77 2 77 333 7 7 11111111 7 888888 5555 9 1 777 22 11 4 2 0 88
consensus : TAAAGCCCGTTTTC-CATGGCGCGTATTNTTGCTGTGCTG--T------TT---T----C----CCTAAGCCGC-----T---T---TTTGT-CGCGCAGTAT--TAAC--------------AGGCG---C-------------ACAG----A-CA--ATCA-------ATTTCCAT--GATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAA--G-TGAA-TTTCCACGCATTGTACATGCAGA-CAAGCGT--------AGAAA-AATCGC------CTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGC---AG-AAATCTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
Reference ( gi|3 ) : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTG--T------TT---T----C----CCTAAGCTAC-----T---T---TTTGT-CGCGCAGTAT--TAAC--------------AGGCG---C-------------ACAG----A-CA--ATCA-------GTTTCCAT--GATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATTCAAA--G-GTAA-TTTCCACGCATTGTACATGCAGA-CAAGCGT--------AGAAA-AATCGC------CTAT----ACTGGCGACATTTGTCCGTGCGGTTAT-TAGTCAGCGC---AA-AAATCTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAATCGTCAGAATAATACGTTCCATGGAAAA
gi|1 : TAAAGCCCGTTTTC-CGTGGCGCATATTTTTGCTGTGCTG--T------TT---TTT--C----CCTAAGTTTC-----T---T---TTTGT-CGCGCAGTAT--TAAC--------------AGGCG---C-------------ACAG----A-CA--ATCA-------ATTTCCAT--AATGTAGAT-------TGACTGAGCAGAGTTTATAGAGGCCCGTGCGTGGAAAAAACACATGTATTTATTATGTAG--TGCCAATCCAAA--G-TGAA-TTTCCGCGCATTGTACATGCAGA-CAAGCGT--------AGAAA-AATCGC------CTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGC---AG-AAATCTGCTCCGGTGGAAACGAAAGTATGCTAGATAGCGTGAAGCGA--TTTTTA-TATAAGTAGCGCCTGTTCTGCGCATCCAAACCCCTG-CGATTTAGGTGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|2 : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTG--T------TT---TTT--C----CCTAAGCTAC-----C---T---TTTGT-CGCATAGTAT--TAAC--------------AGGCG---C-------------ACAG----A-TA--ATCA-------ATTTCCAT--GATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTTCGTGGAAATA-CACGTGTATTTATTGTGTAG--TGTACATCCAAA--G--TAA-ATTCCACGCATTGAACATGCAGA-CAAGCGT--------AGAAA-AATCGC------CTAT----ACCGGCCACTTTTGTCCGTGCGGTTAT-TAGTCAGCGC---AG-TATTCTGCTCCGATGGAAACGAAAGTATACTAGATAGTGTGAAGTGA--CATTTA-CAAAAGCAGCGCATATTCTGCGCATACAAACCTCTG-CGATTTAGGTGTCGAAACCGTCAGAATAATACGCGCCATGGAAAAag
gi|12 : TAAAGCCCGTTTTC-CATGATGCGTAATTTTGCTATGCTG--T------TT---TTT--C----CCTAAGCTAC-----T---T---TTTGT-CGCACGGTAT--TAAC--------------AGGTG---C-------------ACAG----A-CA--ATCA-------ATTTCCGT--GATGCAGAT-------TGTCTTAGCAGAGTTTATAGAGGAACGTGCGTGGAAATA-CACATGTATTTATAGTGTAG--TGCCCATCCAAA--G-TGAA-TGTCCACACATTGTACATGCAGA-AAAGTGT--------AGAAA-AATCGC------CTAT----ACTGGCGACTTTTGTCCATGTGGTTAT-AAGTCAGCGC---AG-AAATCTGCTCTGATGG-AACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCACATACAAACCCCAG-CAATTTAAGag
gi|4 : AAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTG--T------TT---T----C----CCTTAGTT-T-----T---T---TTTGT-CGCGCAGTAT--TAAC--------------AGGCG---C-------------ACAG----A-CA--ATCA-------ATTTCCAT--GATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAT--TGCCCATCCAAA--G-TGAA-TTTCCACGCATTGTATATGCAGA-CAAGCGT--------AGAAA-AATCGC------CTAT----ACTGGCGACATTTGTCCGTGCGGATAT-TAGTCAACGC---AA-AAATCTGCTCCGATGGAAACGAAAGTATGCTAGATAATGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGTTCCATGGAAAAt
gi|5 : AAAGCCCGTTTTC-CGTGGCGCGAATTTTTGTTGTGCTG--TGTTGTTTT---T----T----TCTAAGCTAC-----T---T---TTTGT-CGCGCAGTAT--TAAC--------------AGGCG---C-------------ACAG----A-AA--ATCA-------GTTTCCAT--GATGCAGAT-------TATCTGAGCAGA-TTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGCAG--TGCCCATCCGAA--G-TTAA-TTTCCAAGCATTGTACATGCAGA-CAAGCGT--------AGAAA-AATCGC------CTAT----TCTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGC---AG-AAATCTGCTTCGATGGAAAC------------GATAGTGTGAAGCGG--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCTCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|6 : AAAGCCCATTTTC-CATGGCGTGTATTTTT-----------T------TT---T----C----CCTAAGCTAC-----T---T---TTTGT-CGCGCAGTAT--TTAC--------------AGGCG---C-------------ACAG----A-AA--ATCA-------ATTTCCAT--GATGCAAAT-------TGTCTGAGCAGAGTTAATAGAGGCACGTGTGTGGAAATG-CACATGTATTTATTGTGTAG--TGCCCATTCAAA--G-TGAA-TTACCACACACTGTACATGCAGA-CAAGTGT--------AGAAA-AATCGC------TTAT----ACTGGCGACTTTTGTCCTTGCGGTTAT-GAGTCAGCGT---AG-AAATCTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGCGAAGCGA--ATTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCATAAGAATAATACGCACCATGGAAAAgg
gi|11 : AAAGCCCGTTTTC-CATGGCACGTATTTTTTCTGTGCTG--T------TT---TTT--C----CCTAAGCTAC-----T---T---TTTGT-TGCGCAGTAT--TAAC--------------AGGCG---C-------------ACAG----A-CA--ATCA-------ATTTCCAT--GATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCCTTGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAA--GTGTA--TTTCCATGCATTGTACATACAGG-CAAGCGT--------AGAAA-AATCGC------CTAT----ACTGGCAACTTTTGTCTGTGCAGTTAT-TAGTCAGCGC----------------CGCTGGAAACGAAAGTATGTTAGATAGTGT-AAGCGA--TTTTTA-CCAAGGTAGCGCGTGT-------ATACAAACCCCTG-TGATTTAGGCGCCAAAACCGTCAGAATAATATGCGCCATGGAAAAag
gi|7 : AAAGCTCATTTTC-CATGGCGCGTATTTTTGCTGTGCTG--T------TT---TTTTGC----CCTAA----------------------T-CA---AGTAT--TAAC--------------AGGCG---C-------------ACAG----A-CA--ATCA-------CTTCCCAT--GGTGCAGAT-------TGTCTGAGCAGAGTTTATA-AGGCACATGCGTGGATATA-CGCATGTATTTATTGTGTAT--TGTCCATCCAAA--G-TGAA-TTTCCACGCATTGTACATGCAGA-CAAGCGT--------ATAAA-AATCGC------CTAT----TCTGTCGACTTTTGCGCGTGCGGTTAG-AAGTCAGAGC---AG-AAATCTGCTCCGGCCGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAAGCACCGAAACCGTCAGAATAATACGCGCCATGGAAAAagg
gi|14 : AAAGCCCGTTTTC-CATGGCGCGTAATTTTGCTGTGCTGTTT------TT---T----C----CCTAAGCTAC-----T---T---TTTGT-CGCGCAGTAT--agg
gi|8 : AGCCCATTTTC-CATGGCGTGTATTTTT-------------------T---T----C----CCTAAGCTAC-----T---T---TTTGT-CGCGCAGTAT--TTAC--------------AGGCG---C-------------ACAG----A-AA--ATCA-------ATTTCCAT--GATGCAAAT-------TGTCTGAGCAGAGTTAATAGAGGCACGTGCGTGGAAATG-CACATGTATTTATTGTGTAG--TGCCCATTCAAA--G-TGAA-TTACCACACACTGTACATGCAGA-CAAGTGT--------AGAAA-AATCGC------TTAT----ACTGGCGACTTTTGTCCTTGCGGTTAT-GAGACAGCGT---AG-AAATCTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGCGAAGCGA--ATTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCATAAGAATAATACGCGCCATGGAAAAatataattcaaaacggaaagaatgcccgcaactgaatcacgagataagtcaagtaaatttccacgcattgtacatgcagacatgcgtagaaaaaacgcctatactggcgacttttgtccgtgcggttattagtcagcgcagaaatttgctccgatggaaacgaaagtatgctagataatgtgaagcaacttttacaaaagcagcgcctattctgcgcatacaaacccatgcgatttagacgccaaaaccgtcagaataatacgcgccatggaaaaag
gi|9 : GCCCATTTTC-CATGGCGCGTATTTTTGCTGTGCTG--T------TT---TTTTTC----CCTAAGCTAC-----T---T---TTTGT-CGCGCAGTGT--TAAC--------------AGGCG---C-------------ACAG----A-CA--ATCA-------ATTTCCGT--GATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCAC---------------ACATGTATTTTTTGTGTAG--TGCCCATCCAAA--G-TGAA-TTTTAACGCATTGTACATGCAGA-TAAGCGT--------AGATATCATCGC------CTAT----ACTGGCGACTTTTGTCCGTGCGGTAAC-TAGTCAGCGC---AG-AAATCTGCTCCGACGGAAA----AGTATGCTAGATAGCGTGAAGCGA--TTTTTTTCAAAAGCAGCGCCTGTTCTGCGCGTACAAACCCCTG-CGATTTAGGCGTCGAAACCGTCATAATAACACGCGCCATGGAAAAag
gi|10 : GCCCATTTTAGCATGGCGCGTATTTTTGCTGTGCTG--T------TT---TTTTTC----CCTAAGCTAC-----T---T---TTTGT-CGCGCAGTGT--TAAC--------------AGGCG---C-------------ACGG----A-CA--ATCA-------ATTTCCGT--GATGCAGAT-------TGTTTGAGCAGAGTTTATAGAGGCAC---------------ACATGTATTTTTTGTGTAG--TGCCCATCCAAA--G-TGAA-TTTTAACGCATTGTACATGCAGA-TAAGCGT--------AGATATAATCGC------CTAT----ACTGGCGACTTTTGTCCGTGCGGTAAC-TAGTCAGCGC---AG-AAATCTGCTCCGACGGAAA----AGTATGCTAGATAGCGTGAAGCGA--TTTTTTTCAAAAGCAGCGCCTGTTCTGCGCGTACAAACCCCTG-CGATTTAGGTGTCGAAACCGTCAGAATAACACGTGCCATGGAAAAagg
gi|9 : CCTTTTTC-CATGGCGCGTGTTAT---TATGACG--G------TT---T----CGACGCCTAAATCGCAGG--G---G---TTTGTACGCGCAG------AAC--------------AGGCG---C-------------ag
gi|7 : gcccattttccatggcgcgtatttttgctgtgctgttttttttccctaagctactttttgtcgcgcagtgttaacaggcgcacagacaatcaatttccgtgatgcagattgtctgagcagagtttatagaggcacacatgtattttttgtgtagtgcccatccaaagtgaattttaacgcattgtacatgcagataagcgtagatatcatcgcctatactggcgacttttgtccgtgcggtaactagtcagcgcagaaatctgctccgacggaaaagtatgctagatagcgtgaagcgatttttttcaaaagcaCCTTTTTC-CATGGCGCGTATTATT-CTG-ACGG--T------TTCGGT----G----CTTAAATCGCAGGGGT---T---TGTAT--GCGCAG------AAC--------------AGGCG---C-------------
gi|1 : aaagctcattttccatggcgcgtatttttgctgtgctgtttttttgccctaatcaagtattaacaggcgcacagacaatcacttcccatggtgcagattgtctgagcagagtttataaggcacatgcgtggatatacgcatgtatttattgtgtattgtccatccaaagtgaatttccacgcattgtacatgcagacaagcgtataaaaatcgcctattctgtcgacttttgcgcgtgcggttagaagtcagagcagaaatctgctccggccgaaacgaaagtatgctagatagtgtgaagcgatttttacaaaagcaTTTTC-CATGGCGCGTATTATT-CTG-ACGG--T------TT---CGG--CA---CCTAAATCGCAGGG-G---T---TTGGA-TGCGCAG------AAC--------------AGGCG---C-------------
gi|5 : taaagcccgttttccgtggcgcatatttttgctgtgctgttttttccctaagtttctttttgtcgcgcagtattaacaggcgcacagacaatcaatttccataatgtagattgactgagcagagtttatagaggcccgtgcgtggaaaaaacacatgtatttattatgtagtgccaatccaaagtgaatttccgcgcattgtacatgcagacaagcgtagaaaaatcgcctatactggcgacttttgtccgtgcggttattagtcagcgcagaaatctgctccggtggaaacgaaagtatgctagatagcgtgaagcgatttttatataagtaTTTTC-CATGGCGCGTATTATT-CTG-ACGG--T------TT---CGG--CG---CCTAAATCGCAGAGGT---T---TGTAT--GCGCAG------AAC--------------AGGCG---CTGCTTTTGTAAAAACCGCTTCA-CACTATC--------GTTTCCATC-GAAGCAGAT-------T-TCTGCGCTGA-CTAATAACCGCACGag
gi|6 : aaagcccgttttccgtggcgcgaatttttgttgtgctgtgttgtttttttctaagctactttttgtcgcgcagtattaacaggcgcacagaaaatcagtttccatgatgcagattatctgagcagatttatagaggcacgtgcgtggaaatacacatgtatttattgtgcagtgcccatccgaagttaatttccaagcattgtacatgcagacaagcgtagaaaaatcgcctattctggcgacttttgtcTTTTC-CATGGTGCGTATTATTCTTATG--G--T------TT---CGG--CG---CCTAAATCGCAGGGGT---T---TGTAT--GCGCAG------AAC--------------AGGCG---C-------------gg
gi|8 : aaagcccattttccatggcgtgtatttttttttccctaagctactttttgtcgcgcagtatttacaggcgcacagaaaatcaatttccatgatgcaaattgtctgagcagagttaatagaggcacgtgtgtggaaatgcacatgtatttattgtgtagtgcccattcaaagtgaattaccacacactgtacatgcagacaagtgtagaaaaatcgcttatactggcgacttttgtccttgcggttatgagtcagcgtagaaatctgctccgatggaaacgaaagtatgctagatagtgcgaagcgaattttacaaaagcaTTTTC-CATGGCGCGTATTATTCTTATG--G--T------TT---CGG--CG---CCTAAATCGCAGGGGT---T---TGTAT--GCGCAG------AAC--------------AGGCG---C-------------ag
gi|10 : agcccattttccatggcgtgtatttttttccctaagctactttttgtcgcgcagtatttacaggcgcacagaaaatcaatttccatgatgcaaattgtctgagcagagttaatagaggcacgtgcgtggaaatgcacatgtatttattgtgtagtgcccattcaaagtgaattaccacacactgtacatgcagacaagtgtagaaaaatcgcttatactggcgacttttgtccttgcggttatgagacagcgtagaaatctgctccgatggaaacgaaagtatgctagatagtgcgaagcgaattttacaaaagcaTTTTC-CATGGCACGTGTTATT-CTG-ACGG--T------TT---CGA--CA---CCTAAATCGCAGG--G---G---TTTGTACGCGCAG------AAC--------------AGGCG---C-------------ag
gi|13 : gcccattttagcatggcgcgtatttttgctgtgctgttttttttccctaagctactttttgtcgcgcagtgttaacaggcgcacggacaatcaatttccgtgatgcagattgtttgagcagagtttatagaggcacacatgtattttttgtgtagtgcccatccaaagtgaattttaacgcattgtacatgcagataagcgtagatataatcgcctatactggcgacttttgtccgtgcggtaactagtcagcgcagaaatctgctccgacggaaaagtatgctagatagcgtgaagcgatttttttcaaaagcaTTTTC-CATGGCGCGTATTATT-CTG-ACTG---------TT---T----CGGAGCCTAAATCGCAGGGGT---T---TGTAT--GCGCAGAAC--TAGCGCTGCTTTTGTAAAAATCGCTTC-------------ACAAT---ATCA--AGCATATTTTCGTTTCCATCGGA-GCAGAT-------T-TCTGCGCTGA-CTTATAACCGCACGag
gi|14 : tgctgttttttccctaagctactttttgtcgcgcagtattaacaggcgtacggacgatcaatttccatgctgcagattgtcttagcagagtttatagaggcacgtgcgtggaaatacacatatatttattgtgtagtgcccatccaaagtgaatttccacgcattgtacatgcagacaagcgtactggcgacttttttcTTTTC-CATGGCGCGTATTATT-CTG-ACGG--T------TT---TGG--CG---TCTAAATCGC-----A---TGGGTTTGTATGCGCAG------AAT--------------AGGCG---C-------------aa
gi|19 : aaagcccgttttccatggcgcgtaattttgctgtgctgttttttccctaagctactttttgtcgcgcagtatatataattcaaaacggaaagaatgcccgcaactgaatcacgagataagtcaagtaaatttccacgcattgtacatgcagacatgcgtagaaaaaacgcctatactggcgacttttgtccgtgcggttattagtcagcgcagaaatttgctccgatggaaacgaaagtatgctagataatgtgaagcaacttttacaaaagcaTTTTC-CATGGCGCGTATTATT-CTG-ACGG--T------TT---CGG--CG---CCTAAATCGCAGGGGT---T---TGTAT--GCGCAG------AAC--------------AGGTG---C-------------ag
gi|18 : atactagcgacttttgtccgtgcggttattagtcagcgcagaaatccgctacgatggaaacgaaagtatgctagatatttacaaaagcaTTTC-CATGGCACGTATTAT--CTG-GATG--G------TT---T----CGGCACTTAAATTGC-----TGGGG---TTTGTATGCGCAG------AAC--------------AGGCG---C-------------ag
gi|15 : tacatgcagacatgcgtagaaaaattgcctataatggtgacttttatccatgtagttattagtcagcgcagaaatctgctccaatggaaatgaaagtatgctagatagtgtgaagcgatttttacaaaagca-CATGGCGCGTATTTTTGCTGTACTG--T------TT----------------------C-----T---T---TTTGT-CGCGCAGTAT--TAAC--------------AGGCG---C-------------ACAG----A-CA--ATCA-------ATTTTAAT--GATGCATAT-------TGTCTGAACAGAGTTTACAGAGGCACGTGCGCGGAAATA-CACATGTGTTTATTGTGTAG--TGCCCATCCAAACTG-GCGA-CTT-------TTGTCCGTGCGG
gi|16 : TTTTACTGCGCTG--T------TT---T----C----TC--GG------------------TTGC-CGTG-AGT-TGATAAT--------------ATCCA---T-------------ATTG----A-CA--ATCA-------GTTTCCAT--TATGCAGATTGCATAGTGTCTGA-CAGAACGT---GGTGAACGTGAGTGGCAGTA-CACAT-T-----TTGTATAGTTTGCACATTttatttgtcggcgcagaaatctgcttcgatggaaacgaaagtatgcgagatagtgtgaggcgatttttacaaaagcaacgcctgttctgttcatactaacccctgcgatttaggcaccgaaaccgtcagaataatacgcaccatggaaaaggg
gi|13 : cgtcaTGCTG--T------TT---TTT--C----CCTAAGCTAC-----T---T---TTTGT-CGCGCAGTAT--TAAC--------------AGGCG---T-------------ACGG----A-CG--ATCA-------ATTTCCAT--GCTGCAGAT-------TGTCTTAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATATATTTATTGTGTAG--TGCCCATCCAAA--G-TGAA-TTTCCACGCATTGTACATGCAGA-CAAGCG------------------------------T----ACTGGCGACTTTTTTCCGTGCGGTTAT-AAGTCAGCGC---AG-AAATCTGCTCCGATGGAAACGAAAATATGCTTGATATTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCTAGTTCTGCGCATACAAACCCCTG-CGATTTAGGCTCCGAAACAGTCAGAATAATACGCGCCATGGAAAAatgcattgggtatgcattttaactgtcaaataaacaattatcaacacggaaagaatattctaaccttgatgtcatcattcaagagaatgttcgcagataaatggaacaattctttatatatcagcgcggaaatctgctccgacggaaa
gi|17 : CATGTATTTATTGTGTAG--TGCCCATCCAAA--C-TGAA-TTTCCATGCAT-ATACATGCAGA-CAAGCAT--------AGAAA-AATCAC------CTAT----ACTGGCGACTTTTGTTTGTTTGGTTAT-TAGTCAGTGC---CA-AAATCTGCTCTGATGGAAACAAAACTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAATCAACGCCTGTTCTGCACAAACAAACCCCTG-CGATTTAGGCGCTGAAACCGTTAGAATAATACGCGCCATGGAAAAaa
gi|14 : TCAA-----GTAAATTTCCACGCATTGTACATGCAGA-CATGCGT--------AGAAA-AAACGC------CTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGC---AG-AAATTTGCTCCGATGGAAACGAAAGTATGCTAGATAATGTGAAGCAA--CTTTTA-CAAAAGCAGCGCCTATTCTGCGCATACAAACCCATG-CGATTTAGACGCCAAAACCGTCAGAATAATACGCGCCATGGAAAAa
gi|9 : aaagcccgttttccatggcgcgtaattttgctgtgctgttttttccctaagctactttttgtcgcgcagtatatataattcaaaacggaaagaatgcccgcaactgaatcacgagataagTTGTACGCGCAGAACAGGCGCTGCTTTTGAAAAA-AATCGCTTCACGCTAT-----CTAGC-ATACTTTTCCGT-CGGag
gi|10 : gcccattttccatggcgcgtatttttgctgtgctgttttttttccctaagctactttttgtcgcgcagtgttaacaggcgcacagacaatcaatttccgtgatgcagattgtctgagcagagtttatagaggcacacatgtattttttgtgtagtgcccatccaaagtgaattttaacgcattgtacatgcagataagcgtagatatcatcgcctatactggcgacttttgtccgtgcggtaactagtcagcgcagaaatctgctTTGTACGCGCAGAACAGGCGCTGCTTTTGAAAAA-AATCGCTTCACGCTAT-----CTAGC-ATACTTTTCCGT-CGGacccctgcgatttaggcgtcgaaaccgtcataataacacgcgccatggaaaaagg
gi|18 : gcccattttagcatggcgcgtatttttgctgtgctgttttttttccctaagctactttttgtcgcgcagtgttaacaggcgcacggacaatcaatttccgtgatgcagattgtttgagcagagtttatagaggcacacatgtattttttgtgtagtgcccatccaaagtgaattttaacgcattgtacatgcagataagcgtagatataatcgcctatactggcgacttttgtccgtgcggtaactagtcagcgcagaaatctgctTACATGCAGA-CATGCGT--------AGAAA-AATTGC------CTAT----AATGGTGACTTTTATCCATGTAGTTAT-TAGTCAGCGC---AG-AAATCTGCTCCAATGGAAATGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCAG-CAATTTAAGTGCCGAAACCATCCAGATAATACGTGCCATGGAAAacccctgcgatttaggtgtcgaaaccgtcagaataacacgtgccatggaaaaag
gi|15 : GC------CCATCCAAACTGGCGACTTTTGTCCGTGCGGTTAT-TTGTCGGCGC---AG-AAATCTGCTTCGATGGAAACGAAAGTATGCGAGATAGTGTGAGGCGA--TTTTTA-CAAAAGCAACGCCTGTTCTGTTCATACTAACCCCTG-CGATTTAGGCACCGAAACCGTCAGAATAATACGCACCATGGAAAA
gi|19 : catggcgcgtatttttgctgtactgtttctttttgtcgcgcagtattaacaggcgcacagacaatcaattttaatgatgcatattgtctgaacagagtttacagaggcacgtgcgcggaaatacacatgtgtttattgtgtagtAT----ACTAGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGC---AG-AAATCCGCTACGATGGAAACGAAAGTATGCTAGATA---------------TTTA-CAAAAGCAGCACCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAAggg
gi|20 : GCGGTTAT-TAATCAGCGCCGAAATAAATCTGCTTCAATGGAAAAGCCAGTATGCTTGAGAATTTGAAGCGATTTTTTTT-CAAAAGC--CG--------GCACA-ACA-----CTGACAATTTTAGCACCGAAACTGCCAGAATAATACGCTTCAGGGAAAag
gi|16 : ggcaactttttataaTTATATA-TCAGCGC---GG-AAATCTGCTCCGACGGAAA
Alignments
lowQualScore : 3333 11
lowQualScore : 2 1 33 777777 3333 88 33 8888888 2 33 5 4444 2 4444 22 4 2
lowQualScore : . . .. ...... .... .. .. ....... . .. . .... . .... .. . .
lowQualScore : 9 0 44 222222 1111 11 44 7777777 7 44 0 7777 0 2222 99 2 1
consensus : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTG--T------TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
Reference ( family-2539 ) : TAAAGCCCGTTTTC-CATGGCGCGTATTNTTGCTGTGCTG--T------TTT----CCCTAAGCCGCTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|1 : TAAAGCCCGTTTTC-CGTGGCGCATATTTTTGCTGTGCTG--T------TTTTT--CCCTAAGTTTCTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATAATGTAGAT-------TGACTGAGCAGAGTTTATAGAGGCCCGTGCGTGGAAAAAACACATGTATTTATTATGTAG--TGCCAATCCAAAGTGAATTTCCGCGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGGTGGAAACGAAAGTATGCTAGATAGCGTGAAGCGA--TTTTTA-TATAAGTAGCGCCTGTTCTGCGCATCCAAACCCCTG-CGATTTAGGTGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|10 : GCCCATTTTAGCATGGCGCGTATTTTTGCTGTGCTG--T------TTTTTTTCCCTAAGCTACTTTTTGTCGCGCAGT--GTTAACAGGCGCACGGACAATCAATTTCCGTGATGCAGAT-------TGTTTGAGCAGAGTTTATAGAGGCAC---------------ACATGTATTTTTTGTGTAG--TGCCCATCCAAAGTGAATTTTAACGCATTGTACATGCAGATAAGCGTAGATATAATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTAAC-TAGTCAGCGCAGAAAT----CTGCTCCGACGGAAA----AGTATGCTAGATAGCGTGAAGCGA--TTTTTTTCAAAAGCAGCGCCTGTTCTGCGCGTACAAACCCCTG-CGATTTAGGTGTCGAAACCGTCAGAATAACACGTGCCATGGAAAAag
gi|11 : AAAGCCCGTTTTC-CATGGCACGTATTTTTTCTGTGCTG--T------TTTTT--CCCTAAGCTACTTTTTGTTGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCCTTGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGTATTTCCATGCATTGTACATACAGGCAAGCGTAGAAA-AATCGCCTAT----ACTGGCAACTTTTGTCTGTGCAGTTAT-TAGTCAGCG----------------CCGCTGGAAACGAAAGTATGTTAGATAGTGT-AAGCGA--TTTTTA-CCAAGGTAGCGCGTGT-------ATACAAACCCCTG-TGATTTAGGCGCCAAAACCGTCAGAATAATATGCGCCATGGAAAAag
gi|12 : TAAAGCCCGTTTTC-CATGATGCGTAATTTTGCTATGCTG--T------TTTTT--CCCTAAGCTACTTTTTGTCGCACGGT--ATTAACAGGTGCACAGACAATCAATTTCCGTGATGCAGAT-------TGTCTTAGCAGAGTTTATAGAGGAACGTGCGTGGAAATA-CACATGTATTTATAGTGTAG--TGCCCATCCAAAGTGAATGTCCACACATTGTACATGCAGAAAAGTGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCATGTGGTTAT-AAGTCAGCGCAGAAAT----CTGCTCTGATGG-AACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCACATACAAACCCCAG-CAATTTAAGagg
gi|13 : TGCTG--T------TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGTACGGACGATCAATTTCCATGCTGCAGAT-------TGTCTTAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATATATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCG----------------T----ACTGGCGACTTTTTTCCGTGCGGTTAT-AAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAATATGCTTGATATTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCTAGTTCTGCGCATACAAACCCCTG-CGATTTAGGCTCCGAAACAGTCAGAATAATACGCGCCATGGAAAAt
gi|14 : AAAGCCCGTTTTC-CATGGCGCGTAATTTTGCTGTGCTGTTT------TTT----CCCTAAGCTACTTTTTGTCGCGCAGT--ATaa
gi|14 : AAGTAAATTTCCACGCATTGTACATGCAGACATGCGTAGAAA-AAACGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----TTGCTCCGATGGAAACGAAAGTATGCTAGATAATGTGAAGCAA--CTTTTA-CAAAAGCAGCGCCTATTCTGCGCATACAAACCCATG-CGATTTAGACGCCAAAACCGTCAGAATAATACGCGCCATGGAAAAatataattcaaaacggaaagaatgcccgcaactgaatcacgagataagtcaagtaaatttccacgcattgtacatgcagacatgcgtagaaaaaacgcctatactggcgacttttgtccgtgcggttattagtcagcgcagaaatttgctccgatggaaacgaaagtatgctagataatgtgaagcaacttttacaaaagcagcgcctattctgcgcatacaaacccatgcgatttagacgccaaaaccgtcagaataatacgcgccatggaaaaag
gi|15 : aaagcccgttttccatggcgcgtaattttgctgtgctgttttttccctaagctactttttgtcgcgcagtatatataattcaaaacggaaagaatgcccgcaactgaatcacgagataagtc-CATGGCGCGTATTTTTGCTGTACTG--T------TT---------------CTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTTAATGATGCATAT-------TGTCTGAACAGAGTTTACAGAGGCACGTGCGCGGAAATA-CACATGTGTTTATTGTGTAG--TGCCCATCCAAACTGag
gi|15 : GCCCATCCAAACTGGCGACTTTTGTCCGTGCGGTTAT-TTGTCGGCGCAGAAAT----CTGCTTCGATGGAAACGAAAGTATGCGAGATAGTGTGAGGCGA--TTTTTA-CAAAAGCAACGCCTGTTCTGTTCATACTAACCCCTG-CGATTTAGGCACCGAAACCGTCAGAATAATACGCACCATGGAAAAgcgacttttgtccgtgcggttatttgtcggcgcagaaatctgcttcgatggaaacgaaagtatgcgagatagtgtgaggcgatttttacaaaagcaacgcctgttctgttcatactaacccctgcgatttaggcaccgaaaccgtcagaataatacgcaccatggaaaaggg
gi|16 : catggcgcgtatttttgctgtactgtttctttttgtcgcgcagtattaacaggcgcacagacaatcaattttaatgatgcatattgtctgaacagagtttacagaggcacgtgcgcggaaatacacatgtgtttattgtgtagtTTTTACTGCGCTG--T------TTT----CTC--GG-------TTGCCGTG-AGTTGAT-AATATCCATATTGACAATCAGTTTCCATTATGCAGATTGCATAGTGTCTGA-CAGAACGT---GGTGAACGTGAGTGGCAGTA-CACAT-T-----TTGTATAGTTTGCACATggg
gi|16 : cgtcaTTATATA-TCAGCGCGGAAAT----CTGCTCCGACGGAAAtatgcattgggtatgcattttaactgtcaaataaacaattatcaacacggaaagaatattctaaccttgatgtcatcattcaagagaatgttcgcagataaatggaacaattctttatatatcagcgcggaaatctgctccgacggaaa
gi|17 : cgtcattttactgcgctgttttctcggttgccgtgagttgataatatccatattgacaatcagtttccattatgcagattgcatagtgtctgacagaacgtggtgaacgtgagtggcagtacacattttgtatagtttgcacattatgcattgggtatgcattttaactgtcaaataaacaattatcaacacggaaagaatattctaaccttgatgtcatcattcaagagaatgttcgcagataaatggaacaattctCATGTATTTATTGTGTAG--TGCCCATCCAAACTGAATTTCCATGCAT-ATACATGCAGACAAGCATAGAAA-AATCACCTAT----ACTGGCGACTTTTGTTTGTTTGGTTAT-TAGTCAGTGCCAAAAT----CTGCTCTGATGGAAACAAAACTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAATCAACGCCTGTTCTGCACAAACAAACCCCTG-CGATTTAGGCGCTGAAACCGTTAGAATAATACGCGCCATGGAAAA
gi|18 : TACATGCAGACATGCGTAGAAA-AATTGCCTAT----AATGGTGACTTTTATCCATGTAGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCAATGGAAATGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCAG-CAATTTAAGTGCCGAAACCATCCAGATAATACGTGCCATGGAAAa
gi|19 : AT----ACTAGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CCGCTACGATGGAAACGAAAGTATGCTAGATA---------------TTTA-CAAAAGCAGCACCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|2 : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTG--T------TTTTT--CCCTAAGCTACCTTTTGTCGCATAGT--ATTAACAGGCGCACAGATAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTTCGTGGAAATA-CACGTGTATTTATTGTGTAG--TGTACATCCAAAGTAAATT-CCACGCATTGAACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACCGGCCACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGTATT----CTGCTCCGATGGAAACGAAAGTATACTAGATAGTGTGAAGTGA--CATTTA-CAAAAGCAGCGCATATTCTGCGCATACAAACCTCTG-CGATTTAGGTGTCGAAACCGTCAGAATAATACGCGCCATGGAAAAag
gi|20 : GGCAACTTTT-TATAAGCGGTTAT-TAATCAGCGCCGAAATAAATCTGCTTCAATGGAAAAGCCAGTATGCTTGAGAATTTGAAGCGATTTTTTTT-CAAAAGC--CG--------GCACA-ACA-----CTGACAATTTTAGCACCGAAACTGCCAGAATAATACGCTTCAGGGAAAag
gi|3 : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTG--T------TTT----CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAGTTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATTCAAAGGTAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACATTTGTCCGTGCGGTTAT-TAGTCAGCGCAAAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAATCGTCAGAATAATACGTTCCATGGAAAA
gi|4 : AAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTG--T------TTT----CCCTTAGTT-TTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAT--TGCCCATCCAAAGTGAATTTCCACGCATTGTATATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACATTTGTCCGTGCGGATAT-TAGTCAACGCAAAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAATGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGTTCCATGGAAAA
gi|5 : AAAGCCCGTTTTC-CGTGGCGCGAATTTTTGTTGTGCTG--TGTTGTTTTT----TTCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGAAAATCAGTTTCCATGATGCAGAT-------TATCTGAGCAGA-TTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGCAG--TGCCCATCCGAAGTTAATTTCCAAGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----TCTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTTCGATGGAAACGA------------TAGTGTGAAGCGG--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCTCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|6 : AAAGCCCATTTTC-CATGGCGTGTATTTTT-----------T------TTT----CCCTAAGCTACTTTTTGTCGCGCAGT--ATTTACAGGCGCACAGAAAATCAATTTCCATGATGCAAAT-------TGTCTGAGCAGAGTTAATAGAGGCACGTGTGTGGAAATG-CACATGTATTTATTGTGTAG--TGCCCATTCAAAGTGAATTACCACACACTGTACATGCAGACAAGTGTAGAAA-AATCGCTTAT----ACTGGCGACTTTTGTCCTTGCGGTTAT-GAGTCAGCGTAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGCGAAGCGA--ATTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCATAAGAATAATACGCACCATGGAAAAgg
gi|7 : AAAGCTCATTTTC-CATGGCGCGTATTTTTGCTGTGCTG--T------TTTTTTGCCCTAA-----------TCA---AGT--ATTAACAGGCGCACAGACAATCACTTCCCATGGTGCAGAT-------TGTCTGAGCAGAGTTTATA-AGGCACATGCGTGGATATA-CGCATGTATTTATTGTGTAT--TGTCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTATAAA-AATCGCCTAT----TCTGTCGACTTTTGCGCGTGCGGTTAG-AAGTCAGAGCAGAAAT----CTGCTCCGGCCGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAAGCACCGAAACCGTCAGAATAATACGCGCCATGGAAAAag
gi|8 : AGCCCATTTTC-CATGGCGTGTATTTTT-------------------TT----CCCTAAGCTACTTTTTGTCGCGCAGT--ATTTACAGGCGCACAGAAAATCAATTTCCATGATGCAAAT-------TGTCTGAGCAGAGTTAATAGAGGCACGTGCGTGGAAATG-CACATGTATTTATTGTGTAG--TGCCCATTCAAAGTGAATTACCACACACTGTACATGCAGACAAGTGTAGAAA-AATCGCTTAT----ACTGGCGACTTTTGTCCTTGCGGTTAT-GAGACAGCGTAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGCGAAGCGA--ATTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCATAAGAATAATACGCGCCATGGAAAAagg
gi|9 : GCCCATTTTC-CATGGCGCGTATTTTTGCTGTGCTG--T------TTTTTTTCCCTAAGCTACTTTTTGTCGCGCAGT--GTTAACAGGCGCACAGACAATCAATTTCCGTGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCAC---------------ACATGTATTTTTTGTGTAG--TGCCCATCCAAAGTGAATTTTAACGCATTGTACATGCAGATAAGCGTAGATATCATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTAAC-TAGTCAGCGCAGAAAT----CTGCTCCGACGGAAA----AGTATGCTAGATAGCGTGAAGCGA--TTTTTTTCAAAAGCAGCGCCTGTTCTGCGCGTACAAACCCCTG-CGATTTAGGCGTCGAAACCGTCATAATAACACGCGCCATGGAAAAag
Alignments
lowQualScore : 11
lowQualScore : 2 5555 00 0 33 8888888 2 33 5 4444 2 4444 22 4 2
lowQualScore : . .... .. . .. ....... . .. . .... . .... .. . .
lowQualScore : 9 3333 33 2 44 7777777 7 44 0 7777 0 2222 99 2 1
consensus : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
Reference ( family-2539 ) : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|1 : TAAAGCCCGTTTTC-CGTGGCGCATATTTTTGCTGTGCTGT----TTTTT--CCCTAAGTTTCTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATAATGTAGAT-------TGACTGAGCAGAGTTTATAGAGGCCCGTGCGTGGAAAAAACACATGTATTTATTATGTAG--TGCCAATCCAAAGTGAATTTCCGCGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGGTGGAAACGAAAGTATGCTAGATAGCGTGAAGCGA--TTTTTA-TATAAGTAGCGCCTGTTCTGCGCATCCAAACCCCTG-CGATTTAGGTGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|10 : GCCCATTTTAGCATGGCGCGTATTTTTGCTGTGCTGT----TTTTTTTCCCTAAGCTACTTTTTGTCGCGCAGT--GTTAACAGGCGCACGGACAATCAATTTCCGTGATGCAGAT-------TGTTTGAGCAGAGTTTATAGAGGCAC---------------ACATGTATTTTTTGTGTAG--TGCCCATCCAAAGTGAATTTTAACGCATTGTACATGCAGATAAGCGTAGATATAATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTAAC-TAGTCAGCGCAGAAAT----CTGCTCCGACGGAAA----AGTATGCTAGATAGCGTGAAGCGA--TTTTTTTCAAAAGCAGCGCCTGTTCTGCGCGTACAAACCCCTG-CGATTTAGGTGTCGAAACCGTCAGAATAACACGTGCCATGGAAAAag
gi|11 : AAAGCCCGTTTTC-CATGGCACGTATTTTTTCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTTGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCCTTGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGTATTTCCATGCATTGTACATACAGGCAAGCGTAGAAA-AATCGCCTAT----ACTGGCAACTTTTGTCTGTGCAGTTAT-TAGTCAGCG----------------CCGCTGGAAACGAAAGTATGTTAGATAGTGT-AAGCGA--TTTTTA-CCAAGGTAGCGCGTGT-------ATACAAACCCCTG-TGATTTAGGCGCCAAAACCGTCAGAATAATATGCGCCATGGAAAAag
gi|12 : TAAAGCCCGTTTTC-CATGATGCGTAATTTTGCTATGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCACGGT--ATTAACAGGTGCACAGACAATCAATTTCCGTGATGCAGAT-------TGTCTTAGCAGAGTTTATAGAGGAACGTGCGTGGAAATA-CACATGTATTTATAGTGTAG--TGCCCATCCAAAGTGAATGTCCACACATTGTACATGCAGAAAAGTGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCATGTGGTTAT-AAGTCAGCGCAGAAAT----CTGCTCTGATGG-AACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCACATACAAACCCCAG-CAATTTAAGagg
gi|13 : TGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGTACGGACGATCAATTTCCATGCTGCAGAT-------TGTCTTAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATATATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCG----------------T----ACTGGCGACTTTTTTCCGTGCGGTTAT-AAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAATATGCTTGATATTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCTAGTTCTGCGCATACAAACCCCTG-CGATTTAGGCTCCGAAACAGTCAGAATAATACGCGCCATGGAAAAt
gi|14 : AAAGCCCGTTTTC-CATGGCGCGTAATTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATaa
gi|14 : AAGTAAATTTCCACGCATTGTACATGCAGACATGCGTAGAAA-AAACGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----TTGCTCCGATGGAAACGAAAGTATGCTAGATAATGTGAAGCAA--CTTTTA-CAAAAGCAGCGCCTATTCTGCGCATACAAACCCATG-CGATTTAGACGCCAAAACCGTCAGAATAATACGCGCCATGGAAAAatataattcaaaacggaaagaatgcccgcaactgaatcacgagataagtcaagtaaatttccacgcattgtacatgcagacatgcgtagaaaaaacgcctatactggcgacttttgtccgtgcggttattagtcagcgcagaaatttgctccgatggaaacgaaagtatgctagataatgtgaagcaacttttacaaaagcagcgcctattctgcgcatacaaacccatgcgatttagacgccaaaaccgtcagaataatacgcgccatggaaaaag
gi|15 : aaagcccgttttccatggcgcgtaattttgctgtgctgttttttccctaagctactttttgtcgcgcagtatatataattcaaaacggaaagaatgcccgcaactgaatcacgagataagtc-CATGGCGCGTATTTTTGCTGTACTGT----TT---------------CTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTTAATGATGCATAT-------TGTCTGAACAGAGTTTACAGAGGCACGTGCGCGGAAATA-CACATGTGTTTATTGTGTAG--TGCCCATCCAAACTGag
gi|15 : GCCCATCCAAACTGGCGACTTTTGTCCGTGCGGTTAT-TTGTCGGCGCAGAAAT----CTGCTTCGATGGAAACGAAAGTATGCGAGATAGTGTGAGGCGA--TTTTTA-CAAAAGCAACGCCTGTTCTGTTCATACTAACCCCTG-CGATTTAGGCACCGAAACCGTCAGAATAATACGCACCATGGAAAAgcgacttttgtccgtgcggttatttgtcggcgcagaaatctgcttcgatggaaacgaaagtatgcgagatagtgtgaggcgatttttacaaaagcaacgcctgttctgttcatactaacccctgcgatttaggcaccgaaaccgtcagaataatacgcaccatggaaaaggg
gi|16 : catggcgcgtatttttgctgtactgtttctttttgtcgcgcagtattaacaggcgcacagacaatcaattttaatgatgcatattgtctgaacagagtttacagaggcacgtgcgcggaaatacacatgtgtttattgtgtagtTTTTACTGCGCTGT----TTTCT--C----GG-------TTGCCGTG-AGTTGAT-AATATCCATATTGACAATCAGTTTCCATTATGCAGATTGCATAGTGTCTGA-CAGAACGT---GGTGAACGTGAGTGGCAGTA-CACAT-T-----TTGTATAGTTTGCACATggg
gi|16 : cgtcaTTATATA-TCAGCGCGGAAAT----CTGCTCCGACGGAAAtatgcattgggtatgcattttaactgtcaaataaacaattatcaacacggaaagaatattctaaccttgatgtcatcattcaagagaatgttcgcagataaatggaacaattctttatatatcagcgcggaaatctgctccgacggaaa
gi|17 : cgtcattttactgcgctgttttctcggttgccgtgagttgataatatccatattgacaatcagtttccattatgcagattgcatagtgtctgacagaacgtggtgaacgtgagtggcagtacacattttgtatagtttgcacattatgcattgggtatgcattttaactgtcaaataaacaattatcaacacggaaagaatattctaaccttgatgtcatcattcaagagaatgttcgcagataaatggaacaattctCATGTATTTATTGTGTAG--TGCCCATCCAAACTGAATTTCCATGCAT-ATACATGCAGACAAGCATAGAAA-AATCACCTAT----ACTGGCGACTTTTGTTTGTTTGGTTAT-TAGTCAGTGCCAAAAT----CTGCTCTGATGGAAACAAAACTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAATCAACGCCTGTTCTGCACAAACAAACCCCTG-CGATTTAGGCGCTGAAACCGTTAGAATAATACGCGCCATGGAAAA
gi|18 : TACATGCAGACATGCGTAGAAA-AATTGCCTAT----AATGGTGACTTTTATCCATGTAGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCAATGGAAATGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCAG-CAATTTAAGTGCCGAAACCATCCAGATAATACGTGCCATGGAAAa
gi|19 : AT----ACTAGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CCGCTACGATGGAAACGAAAGTATGCTAGATA---------------TTTA-CAAAAGCAGCACCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|2 : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACCTTTTGTCGCATAGT--ATTAACAGGCGCACAGATAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTTCGTGGAAATA-CACGTGTATTTATTGTGTAG--TGTACATCCAAAGTAAATT-CCACGCATTGAACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACCGGCCACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGTATT----CTGCTCCGATGGAAACGAAAGTATACTAGATAGTGTGAAGTGA--CATTTA-CAAAAGCAGCGCATATTCTGCGCATACAAACCTCTG-CGATTTAGGTGTCGAAACCGTCAGAATAATACGCGCCATGGAAAAag
gi|20 : GGCAACTTTT-TATAAGCGGTTAT-TAATCAGCGCCGAAATAAATCTGCTTCAATGGAAAAGCCAGTATGCTTGAGAATTTGAAGCGATTTTTTTT-CAAAAGC--CG--------GCACA-ACA-----CTGACAATTTTAGCACCGAAACTGCCAGAATAATACGCTTCAGGGAAAag
gi|3 : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTT----CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAGTTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATTCAAAGGTAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACATTTGTCCGTGCGGTTAT-TAGTCAGCGCAAAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAATCGTCAGAATAATACGTTCCATGGAAAA
gi|4 : AAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTT----CCCTTAGTT-TTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAT--TGCCCATCCAAAGTGAATTTCCACGCATTGTATATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACATTTGTCCGTGCGGATAT-TAGTCAACGCAAAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAATGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGTTCCATGGAAAA
gi|5 : AAAGCCCGTTTTC-CGTGGCGCGAATTTTTGTTGTGCTGTGTTGTTTTT--TTCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGAAAATCAGTTTCCATGATGCAGAT-------TATCTGAGCAGA-TTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGCAG--TGCCCATCCGAAGTTAATTTCCAAGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----TCTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTTCGATGGAAACGA------------TAGTGTGAAGCGG--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCTCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|6 : AAAGCCCATTTTC-CATGGCGTGTATTTTT---------------TTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTTACAGGCGCACAGAAAATCAATTTCCATGATGCAAAT-------TGTCTGAGCAGAGTTAATAGAGGCACGTGTGTGGAAATG-CACATGTATTTATTGTGTAG--TGCCCATTCAAAGTGAATTACCACACACTGTACATGCAGACAAGTGTAGAAA-AATCGCTTAT----ACTGGCGACTTTTGTCCTTGCGGTTAT-GAGTCAGCGTAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGCGAAGCGA--ATTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCATAAGAATAATACGCACCATGGAAAAgg
gi|7 : AAAGCTCATTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTTTGCCCTAA-----------TCA---AGT--ATTAACAGGCGCACAGACAATCACTTCCCATGGTGCAGAT-------TGTCTGAGCAGAGTTTATA-AGGCACATGCGTGGATATA-CGCATGTATTTATTGTGTAT--TGTCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTATAAA-AATCGCCTAT----TCTGTCGACTTTTGCGCGTGCGGTTAG-AAGTCAGAGCAGAAAT----CTGCTCCGGCCGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAAGCACCGAAACCGTCAGAATAATACGCGCCATGGAAAAag
gi|8 : AGCCCATTTTC-CATGGCGTGTATTTTT-----------------TT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTTACAGGCGCACAGAAAATCAATTTCCATGATGCAAAT-------TGTCTGAGCAGAGTTAATAGAGGCACGTGCGTGGAAATG-CACATGTATTTATTGTGTAG--TGCCCATTCAAAGTGAATTACCACACACTGTACATGCAGACAAGTGTAGAAA-AATCGCTTAT----ACTGGCGACTTTTGTCCTTGCGGTTAT-GAGACAGCGTAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGCGAAGCGA--ATTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCATAAGAATAATACGCGCCATGGAAAAagg
gi|9 : GCCCATTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTTTTCCCTAAGCTACTTTTTGTCGCGCAGT--GTTAACAGGCGCACAGACAATCAATTTCCGTGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCAC---------------ACATGTATTTTTTGTGTAG--TGCCCATCCAAAGTGAATTTTAACGCATTGTACATGCAGATAAGCGTAGATATCATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTAAC-TAGTCAGCGCAGAAAT----CTGCTCCGACGGAAA----AGTATGCTAGATAGCGTGAAGCGA--TTTTTTTCAAAAGCAGCGCCTGTTCTGCGCGTACAAACCCCTG-CGATTTAGGCGTCGAAACCGTCATAATAACACGCGCCATGGAAAAag
Alignments
lowQualScore : 11
lowQualScore : 2 5555 00 0 33 8888888 2 33 5 4444 2 4444 22 4 2
lowQualScore : . .... .. . .. ....... . .. . .... . .... .. . .
lowQualScore : 9 3333 33 2 44 7777777 7 44 0 7777 0 2222 99 2 1
consensus : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
Reference ( family-2539 ) : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|1 : TAAAGCCCGTTTTC-CGTGGCGCATATTTTTGCTGTGCTGT----TTTTT--CCCTAAGTTTCTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATAATGTAGAT-------TGACTGAGCAGAGTTTATAGAGGCCCGTGCGTGGAAAAAACACATGTATTTATTATGTAG--TGCCAATCCAAAGTGAATTTCCGCGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGGTGGAAACGAAAGTATGCTAGATAGCGTGAAGCGA--TTTTTA-TATAAGTAGCGCCTGTTCTGCGCATCCAAACCCCTG-CGATTTAGGTGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|10 : GCCCATTTTAGCATGGCGCGTATTTTTGCTGTGCTGT----TTTTTTTCCCTAAGCTACTTTTTGTCGCGCAGT--GTTAACAGGCGCACGGACAATCAATTTCCGTGATGCAGAT-------TGTTTGAGCAGAGTTTATAGAGGCAC---------------ACATGTATTTTTTGTGTAG--TGCCCATCCAAAGTGAATTTTAACGCATTGTACATGCAGATAAGCGTAGATATAATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTAAC-TAGTCAGCGCAGAAAT----CTGCTCCGACGGAAA----AGTATGCTAGATAGCGTGAAGCGA--TTTTTTTCAAAAGCAGCGCCTGTTCTGCGCGTACAAACCCCTG-CGATTTAGGTGTCGAAACCGTCAGAATAACACGTGCCATGGAAAAag
gi|11 : AAAGCCCGTTTTC-CATGGCACGTATTTTTTCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTTGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCCTTGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGTATTTCCATGCATTGTACATACAGGCAAGCGTAGAAA-AATCGCCTAT----ACTGGCAACTTTTGTCTGTGCAGTTAT-TAGTCAGCG----------------CCGCTGGAAACGAAAGTATGTTAGATAGTGT-AAGCGA--TTTTTA-CCAAGGTAGCGCGTGT-------ATACAAACCCCTG-TGATTTAGGCGCCAAAACCGTCAGAATAATATGCGCCATGGAAAAag
gi|12 : TAAAGCCCGTTTTC-CATGATGCGTAATTTTGCTATGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCACGGT--ATTAACAGGTGCACAGACAATCAATTTCCGTGATGCAGAT-------TGTCTTAGCAGAGTTTATAGAGGAACGTGCGTGGAAATA-CACATGTATTTATAGTGTAG--TGCCCATCCAAAGTGAATGTCCACACATTGTACATGCAGAAAAGTGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCATGTGGTTAT-AAGTCAGCGCAGAAAT----CTGCTCTGATGG-AACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCACATACAAACCCCAG-CAATTTAAGagg
gi|13 : TGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGTACGGACGATCAATTTCCATGCTGCAGAT-------TGTCTTAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATATATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCG----------------T----ACTGGCGACTTTTTTCCGTGCGGTTAT-AAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAATATGCTTGATATTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCTAGTTCTGCGCATACAAACCCCTG-CGATTTAGGCTCCGAAACAGTCAGAATAATACGCGCCATGGAAAAt
gi|14 : AAAGCCCGTTTTC-CATGGCGCGTAATTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATaa
gi|14 : AAGTAAATTTCCACGCATTGTACATGCAGACATGCGTAGAAA-AAACGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----TTGCTCCGATGGAAACGAAAGTATGCTAGATAATGTGAAGCAA--CTTTTA-CAAAAGCAGCGCCTATTCTGCGCATACAAACCCATG-CGATTTAGACGCCAAAACCGTCAGAATAATACGCGCCATGGAAAAatataattcaaaacggaaagaatgcccgcaactgaatcacgagataagtcaagtaaatttccacgcattgtacatgcagacatgcgtagaaaaaacgcctatactggcgacttttgtccgtgcggttattagtcagcgcagaaatttgctccgatggaaacgaaagtatgctagataatgtgaagcaacttttacaaaagcagcgcctattctgcgcatacaaacccatgcgatttagacgccaaaaccgtcagaataatacgcgccatggaaaaag
gi|15 : aaagcccgttttccatggcgcgtaattttgctgtgctgttttttccctaagctactttttgtcgcgcagtatatataattcaaaacggaaagaatgcccgcaactgaatcacgagataagtc-CATGGCGCGTATTTTTGCTGTACTGT----TT---------------CTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTTAATGATGCATAT-------TGTCTGAACAGAGTTTACAGAGGCACGTGCGCGGAAATA-CACATGTGTTTATTGTGTAG--TGCCCATCCAAACTGag
gi|15 : GCCCATCCAAACTGGCGACTTTTGTCCGTGCGGTTAT-TTGTCGGCGCAGAAAT----CTGCTTCGATGGAAACGAAAGTATGCGAGATAGTGTGAGGCGA--TTTTTA-CAAAAGCAACGCCTGTTCTGTTCATACTAACCCCTG-CGATTTAGGCACCGAAACCGTCAGAATAATACGCACCATGGAAAAgcgacttttgtccgtgcggttatttgtcggcgcagaaatctgcttcgatggaaacgaaagtatgcgagatagtgtgaggcgatttttacaaaagcaacgcctgttctgttcatactaacccctgcgatttaggcaccgaaaccgtcagaataatacgcaccatggaaaaggg
gi|16 : catggcgcgtatttttgctgtactgtttctttttgtcgcgcagtattaacaggcgcacagacaatcaattttaatgatgcatattgtctgaacagagtttacagaggcacgtgcgcggaaatacacatgtgtttattgtgtagtTTTTACTGCGCTGT----TTTCT--C----GG-------TTGCCGTG-AGTTGAT-AATATCCATATTGACAATCAGTTTCCATTATGCAGATTGCATAGTGTCTGA-CAGAACGT---GGTGAACGTGAGTGGCAGTA-CACAT-T-----TTGTATAGTTTGCACATggg
gi|16 : cgtcaTTATATA-TCAGCGCGGAAAT----CTGCTCCGACGGAAAtatgcattgggtatgcattttaactgtcaaataaacaattatcaacacggaaagaatattctaaccttgatgtcatcattcaagagaatgttcgcagataaatggaacaattctttatatatcagcgcggaaatctgctccgacggaaa
gi|17 : cgtcattttactgcgctgttttctcggttgccgtgagttgataatatccatattgacaatcagtttccattatgcagattgcatagtgtctgacagaacgtggtgaacgtgagtggcagtacacattttgtatagtttgcacattatgcattgggtatgcattttaactgtcaaataaacaattatcaacacggaaagaatattctaaccttgatgtcatcattcaagagaatgttcgcagataaatggaacaattctCATGTATTTATTGTGTAG--TGCCCATCCAAACTGAATTTCCATGCAT-ATACATGCAGACAAGCATAGAAA-AATCACCTAT----ACTGGCGACTTTTGTTTGTTTGGTTAT-TAGTCAGTGCCAAAAT----CTGCTCTGATGGAAACAAAACTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAATCAACGCCTGTTCTGCACAAACAAACCCCTG-CGATTTAGGCGCTGAAACCGTTAGAATAATACGCGCCATGGAAAA
gi|18 : TACATGCAGACATGCGTAGAAA-AATTGCCTAT----AATGGTGACTTTTATCCATGTAGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCAATGGAAATGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCAG-CAATTTAAGTGCCGAAACCATCCAGATAATACGTGCCATGGAAAa
gi|19 : AT----ACTAGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CCGCTACGATGGAAACGAAAGTATGCTAGATA---------------TTTA-CAAAAGCAGCACCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|2 : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACCTTTTGTCGCATAGT--ATTAACAGGCGCACAGATAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTTCGTGGAAATA-CACGTGTATTTATTGTGTAG--TGTACATCCAAAGTAAATT-CCACGCATTGAACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACCGGCCACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGTATT----CTGCTCCGATGGAAACGAAAGTATACTAGATAGTGTGAAGTGA--CATTTA-CAAAAGCAGCGCATATTCTGCGCATACAAACCTCTG-CGATTTAGGTGTCGAAACCGTCAGAATAATACGCGCCATGGAAAAag
gi|20 : GGCAACTTTT-TATAAGCGGTTAT-TAATCAGCGCCGAAATAAATCTGCTTCAATGGAAAAGCCAGTATGCTTGAGAATTTGAAGCGATTTTTTTT-CAAAAGC--CG--------GCACA-ACA-----CTGACAATTTTAGCACCGAAACTGCCAGAATAATACGCTTCAGGGAAAag
gi|3 : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTT----CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAGTTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATTCAAAGGTAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACATTTGTCCGTGCGGTTAT-TAGTCAGCGCAAAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAATCGTCAGAATAATACGTTCCATGGAAAA
gi|4 : AAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTT----CCCTTAGTT-TTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAT--TGCCCATCCAAAGTGAATTTCCACGCATTGTATATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACATTTGTCCGTGCGGATAT-TAGTCAACGCAAAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAATGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGTTCCATGGAAAA
gi|5 : AAAGCCCGTTTTC-CGTGGCGCGAATTTTTGTTGTGCTGTGTTGTTTTT--TTCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGAAAATCAGTTTCCATGATGCAGAT-------TATCTGAGCAGA-TTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGCAG--TGCCCATCCGAAGTTAATTTCCAAGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----TCTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTTCGATGGAAACGA------------TAGTGTGAAGCGG--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCTCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|6 : AAAGCCCATTTTC-CATGGCGTGTATTTTT---------------TTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTTACAGGCGCACAGAAAATCAATTTCCATGATGCAAAT-------TGTCTGAGCAGAGTTAATAGAGGCACGTGTGTGGAAATG-CACATGTATTTATTGTGTAG--TGCCCATTCAAAGTGAATTACCACACACTGTACATGCAGACAAGTGTAGAAA-AATCGCTTAT----ACTGGCGACTTTTGTCCTTGCGGTTAT-GAGTCAGCGTAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGCGAAGCGA--ATTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCATAAGAATAATACGCACCATGGAAAAgg
gi|7 : AAAGCTCATTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTTTGCCCTAA-----------TCA---AGT--ATTAACAGGCGCACAGACAATCACTTCCCATGGTGCAGAT-------TGTCTGAGCAGAGTTTATA-AGGCACATGCGTGGATATA-CGCATGTATTTATTGTGTAT--TGTCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTATAAA-AATCGCCTAT----TCTGTCGACTTTTGCGCGTGCGGTTAG-AAGTCAGAGCAGAAAT----CTGCTCCGGCCGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAAGCACCGAAACCGTCAGAATAATACGCGCCATGGAAAAag
gi|8 : AGCCCATTTTC-CATGGCGTGTATTTTT-----------------TT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTTACAGGCGCACAGAAAATCAATTTCCATGATGCAAAT-------TGTCTGAGCAGAGTTAATAGAGGCACGTGCGTGGAAATG-CACATGTATTTATTGTGTAG--TGCCCATTCAAAGTGAATTACCACACACTGTACATGCAGACAAGTGTAGAAA-AATCGCTTAT----ACTGGCGACTTTTGTCCTTGCGGTTAT-GAGACAGCGTAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGCGAAGCGA--ATTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCATAAGAATAATACGCGCCATGGAAAAagg
gi|9 : GCCCATTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTTTTCCCTAAGCTACTTTTTGTCGCGCAGT--GTTAACAGGCGCACAGACAATCAATTTCCGTGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCAC---------------ACATGTATTTTTTGTGTAG--TGCCCATCCAAAGTGAATTTTAACGCATTGTACATGCAGATAAGCGTAGATATCATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTAAC-TAGTCAGCGCAGAAAT----CTGCTCCGACGGAAA----AGTATGCTAGATAGCGTGAAGCGA--TTTTTTTCAAAAGCAGCGCCTGTTCTGCGCGTACAAACCCCTG-CGATTTAGGCGTCGAAACCGTCATAATAACACGCGCCATGGAAAAag
blockSeqs : G GTTG TT TG TGCATAG . TT T CCAA A AAAT TT T A
blockSeqs : . . TG . . . . T . . . . T .
blockSeqs : . . TT . . . . . . . . . . .
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blockSeqCons :
originalCons : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
finalCons : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
Alignments
lowQualScore : 11
lowQualScore : 2 5555 00 0 33 8888888 2 33 5 4444 2 4444 22 4 2
lowQualScore : . .... .. . .. ....... . .. . .... . .... .. . .
lowQualScore : 9 3333 33 2 44 7777777 7 44 0 7777 0 2222 99 2 1
consensus : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
Reference ( family-2539 ) : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|1 : TAAAGCCCGTTTTC-CGTGGCGCATATTTTTGCTGTGCTGT----TTTTT--CCCTAAGTTTCTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATAATGTAGAT-------TGACTGAGCAGAGTTTATAGAGGCCCGTGCGTGGAAAAAACACATGTATTTATTATGTAG--TGCCAATCCAAAGTGAATTTCCGCGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCGGTGGAAACGAAAGTATGCTAGATAGCGTGAAGCGA--TTTTTA-TATAAGTAGCGCCTGTTCTGCGCATCCAAACCCCTG-CGATTTAGGTGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|10 : GCCCATTTTAGCATGGCGCGTATTTTTGCTGTGCTGT----TTTTTTTCCCTAAGCTACTTTTTGTCGCGCAGT--GTTAACAGGCGCACGGACAATCAATTTCCGTGATGCAGAT-------TGTTTGAGCAGAGTTTATAGAGGCAC---------------ACATGTATTTTTTGTGTAG--TGCCCATCCAAAGTGAATTTTAACGCATTGTACATGCAGATAAGCGTAGATATAATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTAAC-TAGTCAGCGCAGAAAT----CTGCTCCGACGGAAA----AGTATGCTAGATAGCGTGAAGCGA--TTTTTTTCAAAAGCAGCGCCTGTTCTGCGCGTACAAACCCCTG-CGATTTAGGTGTCGAAACCGTCAGAATAACACGTGCCATGGAAAAag
gi|11 : AAAGCCCGTTTTC-CATGGCACGTATTTTTTCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTTGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCCTTGAAATA-CACATGTATTTATTGTGTAG--TGCCCATCCAAAGTGTATTTCCATGCATTGTACATACAGGCAAGCGTAGAAA-AATCGCCTAT----ACTGGCAACTTTTGTCTGTGCAGTTAT-TAGTCAGCG----------------CCGCTGGAAACGAAAGTATGTTAGATAGTGT-AAGCGA--TTTTTA-CCAAGGTAGCGCGTGT-------ATACAAACCCCTG-TGATTTAGGCGCCAAAACCGTCAGAATAATATGCGCCATGGAAAAag
gi|12 : TAAAGCCCGTTTTC-CATGATGCGTAATTTTGCTATGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCACGGT--ATTAACAGGTGCACAGACAATCAATTTCCGTGATGCAGAT-------TGTCTTAGCAGAGTTTATAGAGGAACGTGCGTGGAAATA-CACATGTATTTATAGTGTAG--TGCCCATCCAAAGTGAATGTCCACACATTGTACATGCAGAAAAGTGTAGAAA-AATCGCCTAT----ACTGGCGACTTTTGTCCATGTGGTTAT-AAGTCAGCGCAGAAAT----CTGCTCTGATGG-AACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCACATACAAACCCCAG-CAATTTAAGagg
gi|13 : TGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGTACGGACGATCAATTTCCATGCTGCAGAT-------TGTCTTAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATATATTTATTGTGTAG--TGCCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCG----------------T----ACTGGCGACTTTTTTCCGTGCGGTTAT-AAGTCAGCGCAGAAAT----CTGCTCCGATGGAAACGAAAATATGCTTGATATTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCTAGTTCTGCGCATACAAACCCCTG-CGATTTAGGCTCCGAAACAGTCAGAATAATACGCGCCATGGAAAAt
gi|14 : AAAGCCCGTTTTC-CATGGCGCGTAATTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATaa
gi|14 : AAGTAAATTTCCACGCATTGTACATGCAGACATGCGTAGAAA-AAACGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----TTGCTCCGATGGAAACGAAAGTATGCTAGATAATGTGAAGCAA--CTTTTA-CAAAAGCAGCGCCTATTCTGCGCATACAAACCCATG-CGATTTAGACGCCAAAACCGTCAGAATAATACGCGCCATGGAAAAatataattcaaaacggaaagaatgcccgcaactgaatcacgagataagtcaagtaaatttccacgcattgtacatgcagacatgcgtagaaaaaacgcctatactggcgacttttgtccgtgcggttattagtcagcgcagaaatttgctccgatggaaacgaaagtatgctagataatgtgaagcaacttttacaaaagcagcgcctattctgcgcatacaaacccatgcgatttagacgccaaaaccgtcagaataatacgcgccatggaaaaag
gi|15 : aaagcccgttttccatggcgcgtaattttgctgtgctgttttttccctaagctactttttgtcgcgcagtatatataattcaaaacggaaagaatgcccgcaactgaatcacgagataagtc-CATGGCGCGTATTTTTGCTGTACTGT----TT---------------CTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTTAATGATGCATAT-------TGTCTGAACAGAGTTTACAGAGGCACGTGCGCGGAAATA-CACATGTGTTTATTGTGTAG--TGCCCATCCAAACTGag
gi|15 : GCCCATCCAAACTGGCGACTTTTGTCCGTGCGGTTAT-TTGTCGGCGCAGAAAT----CTGCTTCGATGGAAACGAAAGTATGCGAGATAGTGTGAGGCGA--TTTTTA-CAAAAGCAACGCCTGTTCTGTTCATACTAACCCCTG-CGATTTAGGCACCGAAACCGTCAGAATAATACGCACCATGGAAAAgcgacttttgtccgtgcggttatttgtcggcgcagaaatctgcttcgatggaaacgaaagtatgcgagatagtgtgaggcgatttttacaaaagcaacgcctgttctgttcatactaacccctgcgatttaggcaccgaaaccgtcagaataatacgcaccatggaaaaggg
gi|16 : catggcgcgtatttttgctgtactgtttctttttgtcgcgcagtattaacaggcgcacagacaatcaattttaatgatgcatattgtctgaacagagtttacagaggcacgtgcgcggaaatacacatgtgtttattgtgtagtTTTTACTGCGCTGT----TTTCT--C----GG-------TTGCCGTG-AGTTGAT-AATATCCATATTGACAATCAGTTTCCATTATGCAGATTGCATAGTGTCTGA-CAGAACGT---GGTGAACGTGAGTGGCAGTA-CACAT-T-----TTGTATAGTTTGCACATggg
gi|16 : cgtcaTTATATA-TCAGCGCGGAAAT----CTGCTCCGACGGAAAtatgcattgggtatgcattttaactgtcaaataaacaattatcaacacggaaagaatattctaaccttgatgtcatcattcaagagaatgttcgcagataaatggaacaattctttatatatcagcgcggaaatctgctccgacggaaa
gi|17 : cgtcattttactgcgctgttttctcggttgccgtgagttgataatatccatattgacaatcagtttccattatgcagattgcatagtgtctgacagaacgtggtgaacgtgagtggcagtacacattttgtatagtttgcacattatgcattgggtatgcattttaactgtcaaataaacaattatcaacacggaaagaatattctaaccttgatgtcatcattcaagagaatgttcgcagataaatggaacaattctCATGTATTTATTGTGTAG--TGCCCATCCAAACTGAATTTCCATGCAT-ATACATGCAGACAAGCATAGAAA-AATCACCTAT----ACTGGCGACTTTTGTTTGTTTGGTTAT-TAGTCAGTGCCAAAAT----CTGCTCTGATGGAAACAAAACTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAATCAACGCCTGTTCTGCACAAACAAACCCCTG-CGATTTAGGCGCTGAAACCGTTAGAATAATACGCGCCATGGAAAA
gi|18 : TACATGCAGACATGCGTAGAAA-AATTGCCTAT----AATGGTGACTTTTATCCATGTAGTTAT-TAGTCAGCGCAGAAAT----CTGCTCCAATGGAAATGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCAG-CAATTTAAGTGCCGAAACCATCCAGATAATACGTGCCATGGAAAa
gi|19 : AT----ACTAGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CCGCTACGATGGAAACGAAAGTATGCTAGATA---------------TTTA-CAAAAGCAGCACCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|2 : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTT--CCCTAAGCTACCTTTTGTCGCATAGT--ATTAACAGGCGCACAGATAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTTCGTGGAAATA-CACGTGTATTTATTGTGTAG--TGTACATCCAAAGTAAATT-CCACGCATTGAACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACCGGCCACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGTATT----CTGCTCCGATGGAAACGAAAGTATACTAGATAGTGTGAAGTGA--CATTTA-CAAAAGCAGCGCATATTCTGCGCATACAAACCTCTG-CGATTTAGGTGTCGAAACCGTCAGAATAATACGCGCCATGGAAAAag
gi|20 : GGCAACTTTT-TATAAGCGGTTAT-TAATCAGCGCCGAAATAAATCTGCTTCAATGGAAAAGCCAGTATGCTTGAGAATTTGAAGCGATTTTTTTT-CAAAAGC--CG--------GCACA-ACA-----CTGACAATTTTAGCACCGAAACTGCCAGAATAATACGCTTCAGGGAAAag
gi|3 : TAAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTT----CCCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAGTTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAG--TGCCCATTCAAAGGTAATTTCCACGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACATTTGTCCGTGCGGTTAT-TAGTCAGCGCAAAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAATCGTCAGAATAATACGTTCCATGGAAAA
gi|4 : AAAGCCCGTTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTT----CCCTTAGTT-TTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGACAATCAATTTCCATGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGTAT--TGCCCATCCAAAGTGAATTTCCACGCATTGTATATGCAGACAAGCGTAGAAA-AATCGCCTAT----ACTGGCGACATTTGTCCGTGCGGATAT-TAGTCAACGCAAAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAATGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGTTCCATGGAAAA
gi|5 : AAAGCCCGTTTTC-CGTGGCGCGAATTTTTGTTGTGCTGTGTTGTTTTT--TTCTAAGCTACTTTTTGTCGCGCAGT--ATTAACAGGCGCACAGAAAATCAGTTTCCATGATGCAGAT-------TATCTGAGCAGA-TTTATAGAGGCACGTGCGTGGAAATA-CACATGTATTTATTGTGCAG--TGCCCATCCGAAGTTAATTTCCAAGCATTGTACATGCAGACAAGCGTAGAAA-AATCGCCTAT----TCTGGCGACTTTTGTCCGTGCGGTTAT-TAGTCAGCGCAGAAAT----CTGCTTCGATGGAAACGA------------TAGTGTGAAGCGG--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCTCTG-CGATTTAGGCGCCGAAACCGTCAGAATAATACGCGCCATGGAAAA
gi|6 : AAAGCCCATTTTC-CATGGCGTGTATTTTT---------------TTTT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTTACAGGCGCACAGAAAATCAATTTCCATGATGCAAAT-------TGTCTGAGCAGAGTTAATAGAGGCACGTGTGTGGAAATG-CACATGTATTTATTGTGTAG--TGCCCATTCAAAGTGAATTACCACACACTGTACATGCAGACAAGTGTAGAAA-AATCGCTTAT----ACTGGCGACTTTTGTCCTTGCGGTTAT-GAGTCAGCGTAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGCGAAGCGA--ATTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCATAAGAATAATACGCACCATGGAAAAgg
gi|7 : AAAGCTCATTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTTTGCCCTAA-----------TCA---AGT--ATTAACAGGCGCACAGACAATCACTTCCCATGGTGCAGAT-------TGTCTGAGCAGAGTTTATA-AGGCACATGCGTGGATATA-CGCATGTATTTATTGTGTAT--TGTCCATCCAAAGTGAATTTCCACGCATTGTACATGCAGACAAGCGTATAAA-AATCGCCTAT----TCTGTCGACTTTTGCGCGTGCGGTTAG-AAGTCAGAGCAGAAAT----CTGCTCCGGCCGAAACGAAAGTATGCTAGATAGTGTGAAGCGA--TTTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAAGCACCGAAACCGTCAGAATAATACGCGCCATGGAAAAag
gi|8 : AGCCCATTTTC-CATGGCGTGTATTTTT-----------------TT--CCCTAAGCTACTTTTTGTCGCGCAGT--ATTTACAGGCGCACAGAAAATCAATTTCCATGATGCAAAT-------TGTCTGAGCAGAGTTAATAGAGGCACGTGCGTGGAAATG-CACATGTATTTATTGTGTAG--TGCCCATTCAAAGTGAATTACCACACACTGTACATGCAGACAAGTGTAGAAA-AATCGCTTAT----ACTGGCGACTTTTGTCCTTGCGGTTAT-GAGACAGCGTAGAAAT----CTGCTCCGATGGAAACGAAAGTATGCTAGATAGTGCGAAGCGA--ATTTTA-CAAAAGCAGCGCCTGTTCTGCGCATACAAACCCCTG-CGATTTAGGCGCCGAAACCATAAGAATAATACGCGCCATGGAAAAagg
gi|9 : GCCCATTTTC-CATGGCGCGTATTTTTGCTGTGCTGT----TTTTTTTCCCTAAGCTACTTTTTGTCGCGCAGT--GTTAACAGGCGCACAGACAATCAATTTCCGTGATGCAGAT-------TGTCTGAGCAGAGTTTATAGAGGCAC---------------ACATGTATTTTTTGTGTAG--TGCCCATCCAAAGTGAATTTTAACGCATTGTACATGCAGATAAGCGTAGATATCATCGCCTAT----ACTGGCGACTTTTGTCCGTGCGGTAAC-TAGTCAGCGCAGAAAT----CTGCTCCGACGGAAA----AGTATGCTAGATAGCGTGAAGCGA--TTTTTTTCAAAAGCAGCGCCTGTTCTGCGCGTACAAACCCCTG-CGATTTAGGCGTCGAAACCGTCATAATAACACGCGCCATGGAAAAag