lowQualScore                  :                         7                      
lowQualScore                  :                         .                      
lowQualScore                  :                         2                      
consensus                     :  TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
Reference ( gi|6 )            :  TAAAAGGGGCAGGGCGCTGCGCCTTTTCATTCCGCTCTAGAAAAAA
gi|2                          :  TAAAAGGGGCTAGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
gi|3                          :  TAAACGGGGCAGGGAGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAcc
gi|10                         :  TAAAAGGGACAGGACACTGTACCATTTCATTCCGCTCTAGAAAAa
gi|4                          :  TAAAAGGGGCAGAGCGCTGTGCTCTTTCATTCTGCATTTGAAAAAAc
gi|1                          : cTAATAGGGGCAGGGAACTTTGCCCTTTCATTCAGCTCTAGAAAAAA
gi|7                          :   cAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGGAAAAcc
gi|5                          :  ttAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCACTCGAAAAAA
gi|9                          :    AAAGGAGCAGGGTGCTGCGCCCTTTCATTCTTCTCTTGAAAAAAca
gi|12                         :    AAAGGGACAGGGTCCTGCGCTCTTCCATTCTGCGCTAGAAAAAAa
gi|13                         :    AAAGGGAGAGGGTGCTGCGACCTTCCATTCTGCGCTAGAAAAAA
gi|8                          :     AAGGGGCAGGGCGCTGCGCCCTTTCATTCCCCTCTAGAAAAAA
gi|15                         :           CAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAcc
gi|11                         :            AGGGTGCTGTGCCCTTCCATTCTGTGCTAGAAAAAAc
gi|14                         :     atgggtaAGGGTGCTGCACCATTCCATTCCGCACTTGAAAAAAac
gi|17                         :            gGGGTGCTGCGCTCTTTCATTTCACTCTAGAAAAAaaa
gi|18                         :               GCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAc
gi|19                         :                  CTGCGCCCTTTCATTCCGCTCTAGAAAAAA
gi|16                         :                   TGCGCCCTTTCATTCCGCTGTAGAAAAAAcc
gi|20                         :                   TGCACCCTTTCATTCTGCTTTAGAAAAAAccctaa





Alignments
lowQualScore                  :                                                    
lowQualScore                  :                                                    
lowQualScore                  :                                                    
consensus                     :      TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
Reference ( family-224 )      :      TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
gi|1                          :      TAATAGGGGCAGGGAACTTTGCCCTTTCATTCAGCTCTAGAAAAAA
gi|10                         :     cTAAAAGGGACAGGACACTGTACCATTTCATTCCGCTCTAGAAAAcc
gi|11                         :                AGGGTGCTGTGCCCTTCCATTCTGTGCTAGAAAAAAc
gi|12                         : atgggtaAAAGGGACAGGGTCCTGCGCTCTTCCATTCTGCGCTAGAAAAAAac
gi|13                         :        AAAGGGAGAGGGTGCTGCGACCTTCCATTCTGCGCTAGAAAAAA
gi|14                         :                AGGGTGCTGCACCATTCCATTCCGCACTTGAAAAAA
gi|15                         :              gCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAaaa
gi|16                         :                       TGCGCCCTTTCATTCCGCTGTAGAAAAAAc
gi|17                         :                 GGGTGCTGCGCTCTTTCATTTCACTCTAGAAAAAccctaa
gi|18                         :                   GCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAc
gi|19                         :                      CTGCGCCCTTTCATTCCGCTCTAGAAAAAA
gi|2                          :      TAAAAGGGGCTAGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAcc
gi|20                         :                       TGCACCCTTTCATTCTGCTTTAGAAAAAAcc
gi|3                          :      TAAACGGGGCAGGGAGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAac
gi|4                          :      TAAAAGGGGCAGAGCGCTGTGCTCTTTCATTCTGCATTTGAAAAAAa
gi|5                          :       cAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCACTCGAAAAAA
gi|6                          :      TAAAAGGGGCAGGGCGCTGCGCCTTTTCATTCCGCTCTAGAAAAAAca
gi|7                          :        AAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGGAAAA
gi|8                          :       ttAAGGGGCAGGGCGCTGCGCCCTTTCATTCCCCTCTAGAAAAAA
gi|9                          :        AAAGGAGCAGGGTGCTGCGCCCTTTCATTCTTCTCTTGAAAAAAcc




blockSeqCons                  :      
originalCons                  :      TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
finalCons                     :      TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA





Alignments
lowQualScore                  :                                                    
lowQualScore                  :                                                    
lowQualScore                  :                                                    
consensus                     :      TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
Reference ( family-224 )      :      TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
gi|1                          :      TAATAGGGGCAGGGAACTTTGCCCTTTCATTCAGCTCTAGAAAAAA
gi|10                         :     cTAAAAGGGACAGGACACTGTACCATTTCATTCCGCTCTAGAAAAcc
gi|11                         :                AGGGTGCTGTGCCCTTCCATTCTGTGCTAGAAAAAAc
gi|12                         : atgggtaAAAGGGACAGGGTCCTGCGCTCTTCCATTCTGCGCTAGAAAAAAac
gi|13                         :        AAAGGGAGAGGGTGCTGCGACCTTCCATTCTGCGCTAGAAAAAA
gi|14                         :                AGGGTGCTGCACCATTCCATTCCGCACTTGAAAAAA
gi|15                         :              gCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAaaa
gi|16                         :                       TGCGCCCTTTCATTCCGCTGTAGAAAAAAc
gi|17                         :                 GGGTGCTGCGCTCTTTCATTTCACTCTAGAAAAAccctaa
gi|18                         :                   GCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAc
gi|19                         :                      CTGCGCCCTTTCATTCCGCTCTAGAAAAAA
gi|2                          :      TAAAAGGGGCTAGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAcc
gi|20                         :                       TGCACCCTTTCATTCTGCTTTAGAAAAAAcc
gi|3                          :      TAAACGGGGCAGGGAGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAac
gi|4                          :      TAAAAGGGGCAGAGCGCTGTGCTCTTTCATTCTGCATTTGAAAAAAa
gi|5                          :       cAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCACTCGAAAAAA
gi|6                          :      TAAAAGGGGCAGGGCGCTGCGCCTTTTCATTCCGCTCTAGAAAAAAca
gi|7                          :        AAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGGAAAA
gi|8                          :       ttAAGGGGCAGGGCGCTGCGCCCTTTCATTCCCCTCTAGAAAAAA
gi|9                          :        AAAGGAGCAGGGTGCTGCGCCCTTTCATTCTTCTCTTGAAAAAAcc