lowQualScore : 7
lowQualScore : .
lowQualScore : 2
consensus : TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
Reference ( gi|6 ) : TAAAAGGGGCAGGGCGCTGCGCCTTTTCATTCCGCTCTAGAAAAAA
gi|2 : TAAAAGGGGCTAGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
gi|3 : TAAACGGGGCAGGGAGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAcc
gi|10 : TAAAAGGGACAGGACACTGTACCATTTCATTCCGCTCTAGAAAAa
gi|4 : TAAAAGGGGCAGAGCGCTGTGCTCTTTCATTCTGCATTTGAAAAAAc
gi|1 : cTAATAGGGGCAGGGAACTTTGCCCTTTCATTCAGCTCTAGAAAAAA
gi|7 : cAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGGAAAAcc
gi|5 : ttAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCACTCGAAAAAA
gi|9 : AAAGGAGCAGGGTGCTGCGCCCTTTCATTCTTCTCTTGAAAAAAca
gi|12 : AAAGGGACAGGGTCCTGCGCTCTTCCATTCTGCGCTAGAAAAAAa
gi|13 : AAAGGGAGAGGGTGCTGCGACCTTCCATTCTGCGCTAGAAAAAA
gi|8 : AAGGGGCAGGGCGCTGCGCCCTTTCATTCCCCTCTAGAAAAAA
gi|15 : CAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAcc
gi|11 : AGGGTGCTGTGCCCTTCCATTCTGTGCTAGAAAAAAc
gi|14 : atgggtaAGGGTGCTGCACCATTCCATTCCGCACTTGAAAAAAac
gi|17 : gGGGTGCTGCGCTCTTTCATTTCACTCTAGAAAAAaaa
gi|18 : GCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAc
gi|19 : CTGCGCCCTTTCATTCCGCTCTAGAAAAAA
gi|16 : TGCGCCCTTTCATTCCGCTGTAGAAAAAAcc
gi|20 : TGCACCCTTTCATTCTGCTTTAGAAAAAAccctaa
Alignments
lowQualScore :
lowQualScore :
lowQualScore :
consensus : TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
Reference ( family-224 ) : TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
gi|1 : TAATAGGGGCAGGGAACTTTGCCCTTTCATTCAGCTCTAGAAAAAA
gi|10 : cTAAAAGGGACAGGACACTGTACCATTTCATTCCGCTCTAGAAAAcc
gi|11 : AGGGTGCTGTGCCCTTCCATTCTGTGCTAGAAAAAAc
gi|12 : atgggtaAAAGGGACAGGGTCCTGCGCTCTTCCATTCTGCGCTAGAAAAAAac
gi|13 : AAAGGGAGAGGGTGCTGCGACCTTCCATTCTGCGCTAGAAAAAA
gi|14 : AGGGTGCTGCACCATTCCATTCCGCACTTGAAAAAA
gi|15 : gCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAaaa
gi|16 : TGCGCCCTTTCATTCCGCTGTAGAAAAAAc
gi|17 : GGGTGCTGCGCTCTTTCATTTCACTCTAGAAAAAccctaa
gi|18 : GCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAc
gi|19 : CTGCGCCCTTTCATTCCGCTCTAGAAAAAA
gi|2 : TAAAAGGGGCTAGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAcc
gi|20 : TGCACCCTTTCATTCTGCTTTAGAAAAAAcc
gi|3 : TAAACGGGGCAGGGAGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAac
gi|4 : TAAAAGGGGCAGAGCGCTGTGCTCTTTCATTCTGCATTTGAAAAAAa
gi|5 : cAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCACTCGAAAAAA
gi|6 : TAAAAGGGGCAGGGCGCTGCGCCTTTTCATTCCGCTCTAGAAAAAAca
gi|7 : AAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGGAAAA
gi|8 : ttAAGGGGCAGGGCGCTGCGCCCTTTCATTCCCCTCTAGAAAAAA
gi|9 : AAAGGAGCAGGGTGCTGCGCCCTTTCATTCTTCTCTTGAAAAAAcc
blockSeqCons :
originalCons : TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
finalCons : TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
Alignments
lowQualScore :
lowQualScore :
lowQualScore :
consensus : TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
Reference ( family-224 ) : TAAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAA
gi|1 : TAATAGGGGCAGGGAACTTTGCCCTTTCATTCAGCTCTAGAAAAAA
gi|10 : cTAAAAGGGACAGGACACTGTACCATTTCATTCCGCTCTAGAAAAcc
gi|11 : AGGGTGCTGTGCCCTTCCATTCTGTGCTAGAAAAAAc
gi|12 : atgggtaAAAGGGACAGGGTCCTGCGCTCTTCCATTCTGCGCTAGAAAAAAac
gi|13 : AAAGGGAGAGGGTGCTGCGACCTTCCATTCTGCGCTAGAAAAAA
gi|14 : AGGGTGCTGCACCATTCCATTCCGCACTTGAAAAAA
gi|15 : gCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAaaa
gi|16 : TGCGCCCTTTCATTCCGCTGTAGAAAAAAc
gi|17 : GGGTGCTGCGCTCTTTCATTTCACTCTAGAAAAAccctaa
gi|18 : GCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAc
gi|19 : CTGCGCCCTTTCATTCCGCTCTAGAAAAAA
gi|2 : TAAAAGGGGCTAGGCGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAcc
gi|20 : TGCACCCTTTCATTCTGCTTTAGAAAAAAcc
gi|3 : TAAACGGGGCAGGGAGCTGCGCCCTTTCATTCCGCTCTAGAAAAAAac
gi|4 : TAAAAGGGGCAGAGCGCTGTGCTCTTTCATTCTGCATTTGAAAAAAa
gi|5 : cAAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCACTCGAAAAAA
gi|6 : TAAAAGGGGCAGGGCGCTGCGCCTTTTCATTCCGCTCTAGAAAAAAca
gi|7 : AAAGGGGCAGGGCGCTGCGCCCTTTCATTCCGCTCTAGGAAAA
gi|8 : ttAAGGGGCAGGGCGCTGCGCCCTTTCATTCCCCTCTAGAAAAAA
gi|9 : AAAGGAGCAGGGTGCTGCGCCCTTTCATTCTTCTCTTGAAAAAAcc