lowQualScore                  :                                                                                                       11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111                                                                                                                                                                                                                                                                                                                                                                                                                                          1111111111111111111111111111111111111                                                                             
lowQualScore                  :       1         1  1         11          1                              222                           00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000  1             55555     111            333                          1                         111                            1          2222222                          1                                          1                                                   99999999999999                                                                                                  22      11111     1111111                            11  9999999999999999999999999999999999999999999999999999   11                                    22      1      1                      111             11         5555555  111                                  111    7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777         1                                                        1   111111111                             1                 22    66666666666666666666666666666666666666666666    1  111                                                11       2              11               111111111111     111111    333333333                    11    2222       1          11111    1  1     11    11    4444444444444          1    11  11   1111111111111111111111111111111111111         222       1         1             1               1  6666       11  
lowQualScore                  :       2         5  0   8   2 99  2       5     2 0      2     2    2    333    66                  6  88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888  5             00000     333      6     555      2                   5          2      8       888    777     4   4     4     0     1    9999999               6      0   0     88       99999          1    0       7  1            3    3      3          7            66666666666666 3         44     9  5          99999  6                                                        5 00   5  22222     6666666      777  3   3            33  0000000000000000000000000000000000000000000000000000   33   1       5 3                   7  55      5   3  5               6      111         6   00    3    1111111  111  6             6        2     2  111    7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777         9   7                       9                     2      3   999999999          77      2  2       5 4               11    88888888888888888888888888888888888888888888    5  333                              6              5  33     0 4   1      3   11        4      999999999999     444444    555555555   77     6   77    44    7777       3    66    77777    2  1   5 55    11    3333333333333          5    44  55   5555555555555555555555555555555555555         333  1  4 3  99999  5          6  7               7  1111       22  
lowQualScore                  :       .         .  .   .   . ..  .       .     . .      .     .    .    ...    ..                  .  ..................................................................................................  .             .....     ...      .     ...      .                   .          .      .       ...    ...     .   .     .     .     .    .......               .      .   .     ..       .....          .    .       .  .            .    .      .          .            .............. .         ..     .  .          .....  .                                                        . ..   .  .....     .......      ...  .   .            ..  ....................................................   ..   .       . .                   .  ..      .   .  .               .      ...         .   ..    .    .......  ...  .             .        .     .  ...    ........................................................................................         .   .                       .                     .      .   .........          ..      .  .       . .               ..    ............................................    .  ...                              .              .  ..     . .   .      .   ..        .      ............     ......    .........   ..     .   ..    ..    ....       .    ..    .....    .  .   . ..    ..    .............          .    ..  ..   .....................................         ...  .  . .  .....  .          .  .               .  ....       ..  
lowQualScore                  :       8         0  0   8   0 55  5       0     0 2      0     2    2    222    55                  0  00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000  0             00000     000      7     000      5                   0          3      7       555    666     0   0     0     4     5    6666666               0      8   0     44       22222          2    6       0  4            6    9      6          4            55555555555555 3         33     2  1          11111  3                                                        2 00   0  55555     2222222      222  4   4            88  4444444444444444444444444444444444444444444444444444   66   7       3 9                   0  33      0   5  0               0      777         7   22    3    8888888  777  0             0        2     5  777    9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999         5   3                       0                     5      5   888888888          77      5  2       0 8               88    00000000000000000000000000000000000000000000    0  444                              7              0  88     8 0   8      5   22        3      888888888888     777777    333333333   99     7   11    33    4444       4    99    11111    0  9   0 88    99    2222222222222          1    99  99   7777777777777777777777777777777777777         333  0  7 3  55555  0          0  0               0  0000       00  
consensus                     :     GTGATTTAATTTTTC-CGCCGCCTCACAGNCTCCAACCCGAAATTCGGACCCACTGGCGCCGCCTAGCGGTGAGGNNATTGAACCATTTAGGCATTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCAT-TTTTTT-CAGAAAAAGTCAAANTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGNTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTG--TAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTT-ATTTTCACTCTTTTTGCTGTAGCG---GC--AC-GGGG-TTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--AT-TT-------TT---------TTTC---------A---------CCAT----GTT--CCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCC-CCAGAAATCAAACA---TATCAT---ATACTACGGTTATTGACCTGTCCGGTAGGCTCAA---ACATG--------CTCC--AGAAATAG-----------T----------------------N-------------A------A---------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG----TTTTCTGCAAG-GCTTATGGTTAGATAAAGCGATTGGTGTAAGAAAAACAATT------CGNAANCA----------TAT----------AN-----TTAGTGATGTAGGGTCATTTGAAATTAAGGAAAAACTGGGTTTTTGGCCACTTTCGGA--CCAAAAATAGCCGTTTTTCATCAATTTCAACAAGTTCCA--AA-ATCTT--TATTANTTCACATAA---ACGG--CTG--ATTTTTGTA-CCATT-CTTTANCGGAACATGTATATT--TTCTTGTTTTTACCACAAAT-A-GTTTT--CAAA--AANNTATTAANGACCCGTGCGACACGNGCAAACATAGAACCTA----AACGC----A-TAAAT---TCT-A-AAATCGTTT---CTGTGNC-CACGGGGCTGATTTTCACTATATAATTTAACATATTTTTTATCTACACAATCCACAC
Reference ( gi|2 )            :     GTCATTTAATTTGTC-CGTGGCCCCTAAGGCTCCAACGCGAAACTCGGACCCGCTGGCACCGCTTAGCGAAGAGGACATTGAACCATTTAGGCATCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTACAAGTCACGGC-----ACGGCAT-TTTTTT-CAGAA---GTCAAAGTTCATCATTTTCAACAAGTGCCACAGACCTTAATATTAGGTCTACTATTCTG--ATTTTT-GTA-CCATT-CTTTAACGGAATATGTG--AAGGTTCTTGTTTTTACCATAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCAGCACGTGCAAACAAAGTACCTAAGCGCAG-AAATCAATTTT-ATTTTCACTCATTTTGCTGTAGCG-AAGCGAAC-GGTG-TTCGAACATA-CACGGTTGATTGTTGGTAG-----TCATTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCAAG-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--AT----------TT---------TTTC---------A---------CCAA----GTT--CCATGCATCCCCGACACCTTATTCCTAGCACTAAGGTAATGATTGTTATATAATTCCTTAGGGATTTTCAATGC---CTACAGTCC-CCATAAATCGAACA---T---AT---ATGCTACGGTTATTGATCTGTCCGGCAGGCTCAA---ACATG--------GTCC--ACAAATGG-----------T----------------------G-------------A------A---------GTCCGAACGTTTTTTTCGGCATGGGTTGACCGGTTCGACAGAGGTCATTAGCCCGATCTCGAACTTGAACTCGGG----TTTTCTGCAAG-GTTTATGGTCAGATAAATCAATTGGTGTAAGAAAACTAATT------CATAACCA----------TAT----------AC-----TTAGGGATTTAGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCAGA--CCAAAAA-AGCTGTTTTTTATCGATTTCAACACGTTCCA--AA-ATCTT--TATTAATTCACATAA---ACGG--CTG--ATTTTGGTA-TCATT-ATTTAGAAAAACATGTTTATT--TTCTGGATATTACAACCAAT-A-CTTTT--CAAA--CATTTGTTCTTGACCCGTGCGTCACGTTCACGCATGG----TA----AACAC----ACCACAT---TCTAAGAAATTGTTT---CTATGAC-CACGGGGCTGATTTTTACTACATTATTTAACATATTTTTAATA-AAACAATCCGTAC
gi|1                          :     GTTATTTAATTTTTC-CGCCGCCCATAAGTCTCCAACCCGGAATTTGGACCCACTGGCGCTGCCTAGCAGTGGAGACA
gi|3                          : tagtGTGATTTAATTTTTC-CGTTGCTTCACAGGCTCCAACCCAAAATTCAGACCCACTGGCACTGCTTAGCTGTGAGATGATTGAACCATTTAGGCATTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGC-----ACGGCAT-TTTTTT-CAGAA---ATCAAAGTTCATTATTTTCAACAAGTTCCACAGACCTTAATATTAGGTCTACAATTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGAA--TAGATTCTTGTTTTTACCACAAATAAATTTGTAAA--CTCGTTAAA----GACCAGTGCAGCACGTGCAAACATAGTACCTAAACGCAG-AAATAAATTTT-ATTTTTACTCTTTTTGCTGAAG----AGC---CTGGTG-TTCAAACATG-CATGTGTGGTTGTTGGCAG-----TCATTCAATTCGTACAGTGGACATATAGGTACACTCTGATATCCAGATTGATGGGTTCCGATTAAG-TA-----TTTTC-------GAAAAAA--TCTCATACCAACAAATATG--AT----------TTATTCAAATTTTTT---------A---------CCAT----GTT--CCATGCATCCGGGGCACCTTATTCCTAGCGCTAATGAGATGATTGTTACATCATTTCTTAGGGATTTCCAATGA---CTACAGTCT-ACAGAAATCAAACA---TATCAT---ATACTACAGTTATTGACCTGTCCGGTAGGCTGAA---ACAT----------CCCTTAGAAATAGTTATTTTTAGCT----------------------A-------------A------AAACAATTATGTTCGAACGGTTTTTT-GGCATGGGTTGACCGGTTTGCCAGAGGTCATTAGCCCGATCTCGAACTTTTACTTGGG----TTTTCTACAAG-GTTTAT----AAATAAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggacaacaagtcacggcatttcatgttttttcacaagtcaaagttcaccattttcaacaagttccacagaccttaatattgggtctacaattctgattttggtaccattctttagcggaacatgtgtaggttctgttttttacaacaaataatttctaaaaattcattaacgacccgtgcggcacgtgcatacatgatacctaagcgctaaaatacattttaattatactatttttgctgtagcgcacggggttcgaacatgcatgggtggctgctggtactcgttcaattcgtacaggggacatctatgctcactctggtacccagttttatgggttccgataagtattttcgaaaaaatcgcataccggcaaaaatgatttttttttaatttttcaccatgttccacgcatccccggcgccttattcctggcactagggaggtgatttttacatcattccttagcgattaccaatgcctacagcccccataatcaaacacatcatatactacggctattgacctgtccggcaggcccaaacatggtccagaaatagtgatttttggcttgaaagtccgaacgttttttcggcatggtttgacccgttccccagaggtcattagcccgatttcaaactttaacccgggttttctgcaaggtttatggtcagataaagccattggtgtaagaaaaataatgctaaaccatacacttagcgatatagggtcatttgaaattaaggaaaatctgggttttgggccattttctgaccaaaaacagccgtttttcatcaatttcaacacgctccaaattctttattatttcacataaacggctgattttggtatcattatttagagaaaaatgtattctttctggatactacaaccaatacttttcaaacctttgtccttgacccgtgcgccacgtgcacgcatgtacacactaaatatgtctaaaaattgtttctgtgaccacggggctgattttcactatataatttaacatattttttatctacacaatccacac
gi|5                          : aagtGTGATTTAATTTTTTTCGCGACCTCACAGGCTCCAACCCGAAACTCGGACCCACTGTCGCCGCCTAGCGactatagtcattaaaggtctaatgaaaaaaaaaaac
gi|21                         :  agaGTGATTTAATTTTTC-CGTCGCCTCACAGTGTCCAACCCGAAATTGGTACCAGCTGGCGCCGCCTAGCGGTGAGgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctctacaagtcgctgcacggcattttttttccgaaatcaaagttcatcattttcaacaagttccacataccttaatattgggtctacaattctgacttttgtaccattctttagcggaacatgtacaggttcttgtttttaccacaaataattttgccgaattcattaacgggtgacccgttcagcacgtgcaaacatagtaccttagcgcagaaaataaattttaattgtttttgctgtggcacacgagttcgaacatgccacggtggttgttggttgatgggttccgataagtaatttcgaaaaaatatgattttttcaaaatttttaccatgttccacgcatcccggcacattattcctagcattagggaagtgattttacatcattctttaggaatttccaatgcctacagtccccagaaatcaaacatatcatatactacggttattgacctgaaacatgctccagaaatattcaatttttgctcaaag
gi|5                          :                                                                                                                                                                                                        tCTCTACAAGTCGCTGC-----ACGGCAT-TTTTTTTCCGAA---ATCAAAGTTCATCATTTTCAACAAGTTCCACATACCTTAATATTGGGTCTACAATTCTG--ACTTTT-GTA-CCATT-CTTTAGCGGAACATGTA--CAGGTTCTTGTTTTTACCACAAATAATTTTGC-CGAATTCATTAACGGGTGACCCGTTCAGCACGTGCAAACATAGTACCTTAGCGCAGAAAATAAATTTTAATTGT------TTTTGCTGTGGC--ACACGA------G-TTCGAACATGCCACGG-TGGTTGTTGGTa
gi|1                          :      agagtgatttaatttttttcgcgacctcacaggctccaacccgaaactcggacccactgtcgccgcctagcggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntACAAGTCACGGC-----ATTTCATGTTTTTT-CACAA---GTCAAAGTTCACCATTTTCAACAAGTTCCACAGACCTTAATATTGGGTCTACAATTCTG--ATTTTG-GTA-CCATT-CTTTAGCGGAACATGTG--TAGGTTCTGTTTTTTACAACAAATAATTTC-TAAAAATTCATTAAC----GACCCGTGCGGCACGTGCATACATGATACCTAAGCGCTA-AAATACATTTT-AATTATACTATTTTTGCTGTAGCG----C--AC-GGGG-TTCGAACATG-CATGGGTGGCTGCTGGTAC-----TCGTTCAATTCGTACAGGGGACATCTATGCTCACTCTGGTACCCAGTTTTATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAAAATG--ATTTTTTTTTAATT---------TTTC---------A---------CCAT----GTT--CCACGCATCCCCGGCGCCTTATTCCTGGCACTAGGGAGGTGATTTTTACATCATTCCTTAGCGATTACCAATGC---CTACAGCCC-CCAT-AATCAAACACATC---AT---ATACTACGGCTATTGACCTGTCCGGCAGGCCCAA---ACATG--------GTCC--AGAAATAG-----------T----------------------GATTTTTGGCTTGAA------A---------GTCCGAACG-TTTTTTCGGCATGGTTTGACCCGTTCCCCAGAGGTCATTAGCCCGATTTCAAACTTTAACCCGGG----TTTTCTGCAAG-GTTTATGGTCAGATAAAGCCATTGGTGTAAGAAAAATAATG------CTAAACCA----------TAC----------AC-----TTAGCGATATAGGGTCATTTGAAATTAAGGAAAATCTGGGTTTTGGGCCATTTTCTGA--CCAAAAACAGCCGTTTTTCATCAATTTCAACACGCTCCA--AA-TTCTT--TATTATTTCACATAA---ACGG--CTG--ATTTTGGTA-TCATT-ATTTAGAGAAAAATGTATTCT--TTCTGGATACTACAACCAAT-A-CTTTT--CAAA--CCTTTGTCCTTGACCCGTGCGCCACGTGCACGCAT-G----T------ACAC----ACTAAATATGTCTAA-AAATTGTTT---CTGTGAC-CACGGGGCTGATTTTCACTATATAATTTAACATATTTTTTATCTACACAATCCACACtgatgggttccgataagtaatttcgaaaaaatatgattttttcaaaatttttaccatgttccacgcatcccggcacattattcctagcattagggaagtgattttacatcattctttaggaatttccaatgcctacagtccccagaaatcaaacatatcatatactacggttattgacctgaaacatgctccagaaatattcaatttttgctcaaag
gi|4                          :        tagtgttatttaatttttccgccgcccataagtctccaacccggaatttggacccactggcgctgcctagcagtggagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggacaTCACGGCTTTTCACGGC-T-TTTTTT-TAGAAAAAGTCAAATTCCATAATTTTCAAAAAGTTCCACAGACTTCAATATTTGGTCGACAGGTCTG--TTTTTT-GTA-CCATT-CTTTATCGGAACATTTT--TATTTTCTTGTTTTTACCACAGATAGTTTT-TAAAAATATATTAAA----GACCCGTGAGACACGGACAAACATAGAACCTAAACGCAG-AAATCAATTTT-ATGTTCACTATTTTTACTGTAGCG----C--AC-G-TGCTTCAAACATG-CACATGTGGTTGTTGGTAC-----TCCTTCAATTCGTACAGGGAACATCTAGGTACACTCTGATATACAGATTGATAGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAT--TCACACACCGGCAAATATGAAATGTTCAAGA--TT---------TTTC---------A---------CTA------TTCGCCACGCATCTCCGGGACCACATCGGTAGCACTAGGG-AATGAGTTTTACATCATTCATTAGAAAAACCCAATGC---CAACA-TCCACTATCAATCGGATA---TATCAT---ATACTACGGATATTGCCCTGTCCGGCATGCTCGA---AC--G--------CTCC--AGAAATAG-----------TAATTTTGACGTTTATTTGCCTCA-------------A------A---------GTCCGAACG-TTTTTACGGCAATGTTCGACCGGCTCGCCTTAGGTCATTAGCCTGGCCGGGAACTTTAAC---GGTGTTTTTTCTGCAAT-GCTTATCGTTAGATAAAGCGATTGATGTAAAAAAAC-AATT------CGAAAGCATATTATATATTAT----------AA-----TTAGTGAAGTAGGGTCATTTGAAATTAAGGAAAAA
gi|13                         :                                                                                                                                                                                                         caagtattaTCACGGCTTTTCACAG--T-TTTTTT-TAGAAAAAGTCAAATTTCATCATTTTCAACAAGTTCCACAAAATTCAATACATGGTCTACAGGTCTGTTATTTTT-GTA-CCATT-CTTTATCTGAACATGTA--TATTGTCTTGTTTTTACCACAAATAGTTTT-CAAAAAAATATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAAaacactacgtacaa
gi|19                         :                                                                                                                                                                                                         caagtattaTCACGGCTTTTCACAGC---TTTTTT-TAGAAAAAGTCAAATTTCTTCATTTTCAAAAAGTTCCACAGACTTTA
gi|15                         :                                                                                                                                                                                                                                                                        caagtattaCACAGACTT--------GGTCTACAGGTCTG--TTTTTTTGTA-CCATTTCTTTATCTGAACATGTT--TATTGTCTTGTTTTTACCACAAATAGTTTTTAAAAAAAT-ATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AA
gi|8                          :                                                                                                                                                                                                                                                                                                      aaactttaTG--TTTCTT-GTA-CCATT-TTTTATCGGAACATGTA--TATTTTCTTGATTTTACCACAAATAGTTTTTTAAAAAAATAATAAG----GACCCGTGCGACAAAGCCAAACATAGAACCTAAACGCAG-AAATCAATTTT-ATTTTCACTCTTTTTACTGTAGCGTAAGTG--C------TTCAAACATG-CACATGCGGTTGTTGGTAC-----TCCTTCAACTCGTACAGGGAACATCTAGGTGCACTATGATATACAGATTGAT------------AG-TA-----TTTTC-------GAAATAA--TCACACTCCGGCAAATATGAAATGTTCAAGA--TT---------TTTT---------A---------CCAT----GTG--CCACGCATTTCCGGGACCTTATCGGTAGCACTAGGG-GATGAT
gi|10                         :                                                                                                                                                                                                                                                                                                                --ATTGTT-GTA-CCATT-CTTTAGCGGAATATGTGTTAA--TTCATGTTTTAACCACAAATAAGTTTGCAAAG-TTCATTAAC----AACCCGTGCAATACGTGTAAACATAGTACCTAAGCGCAG-AAATCAATTTT-ATTTTCACTCATTGTGCTGTAGC----GC--AT-GGGG-TTCGAACATA-CACGGTTGATTATTGATAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATGTCGTACCCAGATTGATG
gi|11                         :                                                                                                                                                                                                                                                                                                                    TTTG-GTAGCCATT-CTTTAGCGGAATATGTG--TTGATTCTTGTTTTAACCACAAATAAGTTTGCAAAA-TTCATTAAC----GACCCGTGCAATACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTT-ATTTTCACTCATTGTGCTGTAGC----GC--AT-GGGG-TTCGAACATA-CACGGTTGATTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCCAGATTGATG
gi|12                         :                                                                                                                                                                                                                                                                                                                       g-GTA-CCATT-CTTAAGCGGAATATGTG--TTGATTCTTGTTTTAACCACAAATAAGTTTGCTAAA-TTCATTAAC----AACCCGTGTAATACGTGCAAACATAGTACCTAAGCACAA-AAATCAATTTT-ATTTTCACTCATTGTGCTGTAGC----GC--AT-GGGG-TTCGAACATA-CACGGTTGATTATTGGTAG-----TTGTGTAATTCGTACAGGGGACATCTAGGAACAATCTCGTACCCAGATTGATG
gi|6                          :                                                                                                                                                                                                                                                                                                                                                                                                                                           GCAT-AAAT-AATTTT-ATTTTCACTCTTTTTTCTGTAGTG----C--AC-GGGG-TTCGAACATG-CATGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGTCATCTAGGTTTACTCTGATACCCAGATTGATGGGTTCCGAT-AAGATT-----TTTTT-------GAAAAA---TCGCATACCGACAAATATG--AT----------TT---------TTTT--------------------CAAAATTGTTA-CCATGC----CTGGCAGCTTATTCCTAGCACTGTGGAGGTGATATTTATATCATTCCTTAGGGATTTCTAATGA---ATACAGCCC-CCAGAAATCAAACA---T---ATCATATAGTACG-TTATTGACCTGTCCGATAGGCTCAAGAAACATTCATTTTTTGCTC--AAAAACGA-----------C----------------------T-------------A------A---------GTCCGAACGTTTT-TTCGGCACGGGTTGACC
gi|7                          :                                                                                                                                                                                                                                                                                                                                                                                                                                              tttggttAATTTT-ATTTTCACTCTTTTTGCTGTAGCG----C--AC-GAGG-TTCGAACAAG-CATGGGTGGTTGTTGGTAG-----TCGTTCAACTCGTACAGGGGACATCTAGGTACACTCTGATACCCAGATTGATGGCTTCCGAT-AAG-TATTTTTTTTTT-------TAAAAAA--TCGCATACCGGCAAATATG--AT----------TT---------TTTCAAAATTTTGA---------CCAT----GTT--CCACGCATCCCTGACACCTTATTCCTAGTACTATGGAGGTGATATTTACACCATTCCTTAGGGATTTCTAATGCCTACTACAGCCC-CCAGAAATCAAACA---TATCAT---ATACTACGGTTATTGACCTGTCCGGTAGGCTGAA---ACATA--------CTCA--AGAAATAT-----------T----------------------C-------------ATTTTTTG---------CTCCGAACG-TTTTTTCAGTATGGGTTGACC
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                    tAATTTT-ATTTTCACTCATTTTGCTGTAGTG----C--AT-GGGG-TTCGAACATA-CACGGTTGGTTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCAAGATTGATG
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  -TTCCAACATG-CACGGATG-TTGTTGGTAAACTACTTGTTAAAATCGTACAA-------------ACACTCTGATATACAGATTAGTAGGTTCCAAT-AAG-TA-----TTTTTTGAAGAAGAAAAAAACTCTCAT--CTGCAAATATG--A
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 aaaatttaacttattaagtatgtctgaatatctgaccgtagcgcacatacGGTTGATGGGTTCCGAT-AAG-TA-----ATTTC-------GAAAAAA--T---------------ATG--AT----------TT---------TTTC---------AAAATTTTTACCAT----GTT--CCACGCATCCC-GGCACATTATTCCTAGCATTAGGGAAGTGATT-TTACATCATTCTTTAGGAATTTCCAATGC---CTACAGTCC-CCAGAAATCAAACA---TATCAT---ATACTACGGTTATTGACCTG------------AA---ACATG--------CTCC--AGAAATaatttcatgat
gi|22                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                agagtgatttaatttttttcgcgacctcacaggctccaacccgaaactcggacccactgtcgccgcctagcggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctctacaagtcgctgcacggcattttttttccgaaatcaaagttcatcattttcaacaagttccacataccttaatattgggtctacaattctgacttttgtaccattctttagcggaacatgtacaggttcttgtttttaccacaaataattttgccgaattcattaacgggtgacccgttcagcacgtgcaaacatagtaccttagcgcagaaaataaattttaattgtttttgctgtggcacacgagttcgaacatgccacggtggttgtt-------------A------A---------GTCCGAACGTTTT-TTCGGCATGGGTTGACCattcaatttttgctcaaag
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ctCGTTTCGACAGATGTCATTAGCCCGATCTCGAACATAAACTCGGG----TTTTCTGCAAG-GTTTATGGTCTGATAAAGCAATTGGAGTAAGAAAA-TAATT------CTTAACCA----------TAT----------AC-----TTAGTGAATAAGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCGGA--CCAAAAATAGCTGTTTTTCATCAATTTCAATCCGTGACC--AA-ATCTT--TATTAATTCACATAA---ACGG--TTT--AATTTGGTA-TCATT-ATT
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATTAGCCTGGTCTGGAACTTTAACGGTGT----TTTTCTGCAAATGCTTATGGTTAGATAAAGCGATTGATGTAAGAAAAACAATT------CG-AAGCA----------TATTATATATAATAA-----TTAGTGATGTAGTGTCATTTGAAATTAAGGAAAA
gi|17                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  tcaATTAGCCTGACCTGGAACTTTAACGGCGT----TTTTCTGCAAT-GCTTATGGTTAGATAAAGTGATTGGTGTAAGAAAAACAATTCGAAAGCATAA-TA----------TAT----------ATTATGATTAGTGATGAAGTGTCATTTGAAATTAAGGAAAAA
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           aAAATTAAGGAAAAACTTGGTTTTTGGCCACCTTCGGA--CCAAAAATATCTGTTTTTCATCAATTTCAACCCGTTC
gi|3                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTTCAGAAATCAAA-------GTTCATTAT---TTTCAACAAGTTCCAC-AG-ACCTTAATATTAGGTC-TACAA---TT----CTG--ATTTTTGTA-CCATT-CTTTAGCGGAACATGAATAGA--TTCTTGTTTTTACCACAAATAA-ATTTG--TAAA--C--TCGTTAAAGACCAGTGCAGCACGTGCAAACATAGTACCTA----AACGC----Attt
gi|13                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     aagtgtgatttaatttttccgttgcttcacaggctccaacccaaaattcagacccactggcactgcttagctgtgagatgattgaaccatttaggcattcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctctacaagtcacggcacggcattttAAAA-AGTCAAATTTCATCATTTTCAACAAGTTCCACAAA-AT-------TCAAT--ACATGGTCTACAGGTCTGTTATTTTTGTA-CCATT-CTTTATCTGAACATGTATATT--GTCTTGTTTTTACCACAAAT-A-GTTTT--CAAA--AAAATATTAATGACCCGTGCGACACGGCCAAACATAGAACCTA----AACGC----Agaaataaattttatttttactctttttgctgaagagcctggtgttcaaacatgcatgtgtggttgttggcagtcattcaattcgtacagtggacatataggtacactctgatatccagattgatgggttccgattaagtattttcgaaaaaatctcataccaacaaatatgatttattcaaattttttaccatgttccatgcatccggggcaccttattcctagcgctaatgagatgattgttacatcatttcttagggatttccaatgactacagtctacagaaatcaaacatatcatatactacagttattgacctgtccggtaggctgaaacatcccttagaaatagttatttttagctaaaaacaattatgttcgaacggttttttggcatgggttgaccggtttgccagaggtcattagcccgatctcgaacttttacttgggttttctacaaggtttataaataaaactatagtcattaaaggtctaatgaaaaaaaaaaac
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                caagtattatcacggcttttcacagttttttttagTTCATCATTTTCAACAAGTTCCA--CATACCTTAATATTGGGTC-TACAA---TT----CTG--ACTTTTGTA-CCATT-CTTTAGCGGAACATGTACAGG--TTCTTGTTTTTACCACAAAT-A-ATTTTGCCGAATTCATTAACGGGTGACCCGTTCAGCACGTGCAAACATAG----TACCTTAGCGCAGAAAATAAAT---TTT----AATTGTTTTTGCTGTGGCACACGAGgaaa
gi|4                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          agagtgatttaatttttttcgcgacctcacaggctccaacccgaaactcggacccactgtcgccgcctagcggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctctacaagtcgctgcacggcattttttttccgaaatcaaagTTTCAAAAAGTTCCA--CA-GACTT--CAATATTTGG--TCG---ACAGGTCTG--TTTTTTGTA-CCATT-CTTTATCGGAACATTTTTATT--TTCTTGTTTTTACCACAGAT-A-GTTTT--TAAA--AATATATTAAAGACCCGTGAGACACGGACAAACATAGAACCTA----AACGC------------------AGAAATCAATT---TTATGTT-CA-----CT-ATTTTTACTttcgaacatgccacggtggttgttggttgatgggttccgataagtaatttcgaaaaaatatgattttttcaaaatttttaccatgttccacgcatcccggcacattattcctagcattagggaagtgattttacatcattctttaggaatttccaatgcctacagtccccagaaatcaaacatatcatatactacggttattgacctgaaacatgctccagaaatattcaatttttgctcaaag
gi|8                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       caagtattatcacggcttttcacggcttttttttagaaaaagtcaaattccataatTG--TTTCTTGTA-CCATT-TTTTATCGGAACATGTATATT--TTCTTGATTTTACCACAAAT-AGTTTTT--TAAA--AAAATAATAAGGACCCGTGCGACAAAGCCAAACATAGAACCTA----AACGC----Agtagcgcacgtgcttcaaacatgcacatgtggttgttggtactccttcaattcgtacagggaacatctaggtacactctgatatacagattgataggttccgataagtattttcgaaaaattcacacaccggcaaatatgaaatgttcaagatttttcactattcgccacgcatctccgggaccacatcggtagcactagggaatgagttttacatcattcattagaaaaacccaatgccaacatccactatcaatcggatatatcatatactacggatattgccctgtccggcatgctcgaacgctccagaaatagtaattttgacgtttatttgcctcaaagtccgaacgtttttacggcaatgttcgaccggctcgccttaggtcattagcctggccgggaactttaacggtgttttttctgcaatgcttatcgttagataaagcgattgatgtaaaaaaacaattcgaaagcatattatatattataattagtgaagtagggtcatttgaaattaaggaaaaaaacactacgtacaa
gi|15                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTTTGTA-CCATTTCTTTATCTGAACATGTTTATT--GTCTTGTTTTTACCACAAAT-A-GTTTT--TAAA--AAAATATTAATGACCCGTGCGACACGGCCAAACATAGAACCTA----AACGC----Agaaatcaattttattttcactctttttactgtagcgtaagtgcttcaaacatgcacatgcggttgttggtactccttcaactcgtacagggaacatctaggtgcactatgatatacagattgatagtattttcgaaataatcacactccggcaaatatgaaatgttcaagattttttaccatgtgccacgcatttccgggaccttatcggtagcactaggggatgat
gi|11                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    aaactttacacagacttggtctacaggtctgttTTTGGTAGCCATT-CTTTAGCGGAATATGT--GTTGATTCTTGTTTTAACCACAAAT-A-AGTTTG-CAAA---ATTCATTAACGACCCGTGCAATACGTGCAAACATAG----TA----gaa





Alignments
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          11111111111111111111111111111111111111111111111111111                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
lowQualScore                  :                                                                                                                                                            999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999                 22222    11             222                                                                                                                                                                                                                         2222                                                                                                                 11111     1111111                             77777777777777777777777  1111111                                                                                      111                                                            1111     222222222               11111111111111111111111111111111111111111111111111111                                                                                                                  111                           777777777777777777777                                                                                              11                                                 11    1111                                                  111                        444444       222    4444444444                                                          11             
lowQualScore                  :                                                                       8   3   3   8  1                                             22                      666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666                 00000    22       5     111      1                                     1        11    66         4                         1                      0   7     8         8888                                       3    2                1            9999 44                3     0             88888                                                              4   4  11111     4444444       66  1   2             33333333333333333333333  6666666       5               3                     0  00                                    000            22                                        0     0000     222222222               88888888888888888888888888888888888888888888888888888         5                                                 0          77   77           5             77      1   000       5     11     88  1  888888888888888888888   1       6  3                              3              0         7   2                   88                  1                     9   2    88    2222       8        7 8 8    6  7    6        8888 1  666          7    77  88   333333     0 444    5555555555    6         1                        4               4  88 2           
lowQualScore                  :                                                                       .   .   .   .  .                                             ..                      ................................................................................................                 .....    ..       .     ...      .                                     .        ..    ..         .                         .                      .   .     .         ....                                       .    .                .            .... ..                .     .             .....                                                              .   .  .....     .......       ..  .   .             .......................  .......       .               .                     .  ..                                    ...            ..                                        .     ....     .........               .....................................................         .                                                 .          ..   ..           .             ..      .   ...       .     ..     ..  .  .....................   .       .  .                              .              .         .   .                   ..                  .                     .   .    ..    ....       .        . . .    .  .    .        .... .  ...          .    ..  ..   ......     . ...    ..........    .         .                        .               .  .. .           
lowQualScore                  :                                                                       0   2   8   0  0                                             00                      000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000                 33333    66       7     666      0                                     0        77    99         0                         0                      8   5     1         5555                                       6    5                8            0000 22                1     8             33333                                                              4   4  11111     4444444       11  9   0             88888888888888888888888  2222222       0               4                     2  66                                    000            11                                        9     7777     999999999               88888888888888888888888888888888888888888888888888888         7                                                 7          66   99           7             99      7   000       7     99     55  0  555555555555555555555   0       7  5                              0              2         0   0                   00                  0                     0   0    88    0000       3        0 3 3    7  0    7        0000 0  333          7    77  00   333333     7 777    5555555555    0         0                        0               0  00 5           
consensus                     :                                                        GTGATTTAATTTTTC-CGCCGCCTCAC-AGGCTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAATTCTG--ATTTTTGTA-CCATTCTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATGA----TTT--------T-------TT-------TTCACCA-TGTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTC---AAACA---------TGCTCCAGAAATAGT-------------NATTTT------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGA--TAAAGCGATT---GGTGTAA-GAAAAACAATTCGAAANCA----------T----------ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATT-ATTTAGANAAACATGTTTATTTTCTGGATATTACAACCAATACTTTTCAAACATTTGTTCTTGACCCGTGCGNCACGTNCACGCATGG----TAAACGCA-NAAATATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
Reference ( family-217 )      :                                                        GTGATTTAATTTTTC-CGCCGCCTCAC-AGNCTCCAACCCGAAATTCGGACCCACTGGCGCCGCCTAGCGGTGAGGNNATTGAACCATTTAGGCATTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAANTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGNTCTG--ATTTTTGTA-CCATTCTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATGA----TTT--------T-------TT-------TTCACCA-TGTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTGTCCGGTAGGCTC---AAACA---------TGCTCCAGAAATAGT-------------NA----------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTTAGA--TAAAGCGATT---GGTGTAA-GAAAAACAATTCGNAANCA----------T----------ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGTTTTTGGCCACTTTCGGACCAAAAATAGCCGTTTTTCATCAATTTCAACAAGTTCCAAAATCTTTATTANTTCACATAAACGGCTGATTTTTGTACCATT-CTTTANCGGAACATGTATATTTTCTTGTTTTTACCACAAATAGTTTTCAAAAANNTATTAANGACCCGTGCGACACGNGCAAACATAGAACCTAAACGCA-TAAAT---TCT-A--AAATCGTTTCTGTGNCCACGGGGCTGATTTTCACTATATAATTTAACATATTTTTTATCTACACAATCCACAC
gi|1                          :                                                        GTTATTTAATTTTTC-CGCCGCC-CATAAGTCTCCAACCCGGAATTTGGACCCACTGGCGCTGCCTAGCAGTGGAGACA
gi|1                          :                                                                                                                                                                                                                                                             tagtACAAGTCACGGCATTTCATG----TTTTTT-CACAA---GTCAAAGTTCACCATTTTCAACAAGTTCCACAGACCTTAATATTGGGTCTACAATTCTG--ATTTTGGTA-CCATTCTTTAGCGGAACATGTGTAGGTTCTGTTTTTTACAACAAATAATTTC-TAAAAATTCATTAAC----GACCCGTGCGGCACGTGCATACATGATACCTAAGCGCTA-AAATACATTTTAATTATACTATTTTTGCTGTAGCG---C--ACGGGGTTCGAACATG-CATGGGTGGCTGCTGGTAC-----TCGTTCAATTCGTACAGGGGACATCTATGCTCACTCTGGTACCCAGTTTTATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAAAATGA----TTTTTTTTTAAT-------TT-------TTCACCA-TGTTCCACGCATCCCCGGCGCCTTATTCCTGGCACTAGGGAGGTGATTTTTACATCATTCCTTAGCGATTACCAATGC---CTACAGCCCCCAT-AATCAAACACATCATATACTACGGCTATTGACCTGTCCGGCAGGCCC---AAACA---------TGGTCCAGAAATAGTGATTTTTGGCTTGAA----------------------A---------------GTCCGAACG-TTTTTTCGGCATGGTTTGACCCGTTCCCCAGAGGTCATTAGCCCGATTTCAAACTTTAACCCGGG--TTTTCTGCAAG-GTTTATGGTCAGA--TAAAGCCATT---GGTGTAA-GAAAAATAATGCTAAACCA----------T----------ACACTTAGCGA-TATAGGGTCATTTGAAATTAAGGAAAATCTGGGTTTTGGGCCATTTTCTGACCAAAAACAGCCGTTTTTCATCAATTTCAACACGCTCCAAATTCTTTATTATTTCACATAAACGGCTGATTTTGGTATCATT-ATTTAGAGAAAAATGTATTCTTTCTGGATACTACAACCAATACTTTTCAAACCTTTGTCCTTGACCCGTGCGCCACGTGCACGCATG-----TACACAC--TAAATATGTCTAA--AAATTGTTTCTGTGACCACGGGGCTGATTTTCACTATATAATTTAACATATTTTTTATCTACACAATCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggacaacaagtcacggcatttcatgttttttcacaagtcaaagttcaccattttcaacaagttccacagaccttaatattgggtctacaattctgattttggtaccattctttagcggaacatgtgtaggttctgttttttacaacaaataatttctaaaaattcattaacgacccgtgcggcacgtgcatacatgatacctaagcgctaaaatacattttaattatactatttttgctgtagcgcacggggttcgaacatgcatgggtggctgctggtactcgttcaattcgtacaggggacatctatgctcactctggtacccagttttatgggttccgataagtattttcgaaaaaatcgcataccggcaaaaatgatttttttttaatttttcaccatgttccacgcatccccggcgccttattcctggcactagggaggtgatttttacatcattccttagcgattaccaatgcctacagcccccataatcaaacacatcatatactacggctattgacctgtccggcaggcccaaacatggtccagaaatagtgatttttggcttgaaagtccgaacgttttttcggcatggtttgacccgttccccagaggtcattagcccgatttcaaactttaacccgggttttctgcaaggtttatggtcagataaagccattggtgtaagaaaaataatgctaaaccatacacttagcgatatagggtcatttgaaattaaggaaaatctgggttttgggccattttctgaccaaaaacagccgtttttcatcaatttcaacacgctccaaattctttattatttcacataaacggctgattttggtatcattatttagagaaaaatgtattctttctggatactacaaccaatacttttcaaacctttgtccttgacccgtgcgccacgtgcacgcatgtacacactaaatatgtctaaaaattgtttctgtgaccacggggctgattttcactatataatttaacatattttttatctacacaatccacac
gi|10                         :                                                                                                                                                         tagtgttatttaatttttccgccgcccataagtctccaacccggaatttggacccactggcgctgcctagcagtggagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggaca--ATTGTTGTA-CCATTCTTTAGCGGAATATGTGTTAATTCATGTTTTAACCACAAATAAGTTTGCAAAG-TTCATTAAC----AACCCGTGCAATACGTGTAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGATAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATGTCGTACCCAGATTGATG
gi|11                         :                                                                                                                                                                                                                                                                                                                                                                       TTTGGTAGCCATTCTTTAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCAAAA-TTCATTAAC----GACCCGTGCAATACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCCAGATTGATG
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                          gGTA-CCATTCTTAAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCTAAA-TTCATTAAC----AACCCGTGTAATACGTGCAAACATAGTACCTAAGCACAA-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TTGTGTAATTCGTACAGGGGACATCTAGGAACAATCTCGTACCCAGATTGATG
gi|13                         :                                                                                                                                                                                                                                                                      TCACGGCTTTTCACAG--TTTTTTT-TAGAAAAAGTCAAATTTCATCATTTTCAACAAGTTCCACAAAATTCAATACATGGTCTACAGGTCTGTTATTTTTGTA-CCATTCTTTATCTGAACATGTATATTGTCTTGTTTTTACCACAAATAGTTTT-CAAAAAAATATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAA
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 caagtattaCCGTAGCG---C--ACATACTTCCAACATG-CACGGAT-GTTGTTGGTAAACTACTTGTTAAAATCGTACAA-------------ACACTCTGATATACAGATTAGTAGGTTCCAAT-AAG-TA-----TTTTTTGAAGAAGAAAAAAACTCTCAT--CTGCAAATATGA----
gi|15                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     aaaatttaacttattaagtatgtctgaatatctgaTTTTTGTACCATTTCTTTATCTGAACATGTTTATTGTCTTGTTTTTACCACAAATAGTTTTTAAAAAAATATTAATGACCCGTGCGACACGGCCAAACATAGAACCTAAACGCA-GAAaatttcatgat
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            aaactttacacagacttggtctacaggtctgttATTAGCCTGGTCTGGAACTTTAACGGTGT--TTTTCTGCAAATGCTTATGGTTAGA--TAAAGCGATT---GATGTAA-GAAAAACAATTCG-AAGCA----------TATTATATATAATAATTAGTGA-TGTAGTGTCATTTGAAATTAAGGAAAA
gi|17                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          tcaATTAGCCTGACCTGGAACTTTAACGGCGT--TTTTCTGCAAT-GCTTATGGTTAGA--TAAAGTGATT---GGTGTAA-GAAAAACAATTCGAAAGCATAATATATATT----------ATGATTAGTGA-TGAAGTGTCATTTGAAATTAAGGAAAAA
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   aAATTTTATTTTCACTCATTTTGCTGTAGTG---C--ATGGGGTTCGAACATA-CACGGTTGGTTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCAAGATTGATG
gi|19                         :                                                                                                                                                                                                                                                                      TCACGGCTTTTCACAGC--TTTTTT-TAGAAAAAGTCAAATTTCTTCATTTTCAAAAAGTTCCACAGACTTTA
gi|2                          :                                               caagtattaGTCATTTAATTTGTC-CGTGGCCCCTA-AGGCTCCAACGCGAAACTCGGACCCGCTGGCACCGCTTAGCGAAGAGGACATTGAACCATTTAGGCATCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAA---GTCAAAGTTCATCATTTTCAACAAGTGCCACAGACCTTAATATTAGGTCTACTATTCTG--ATTTTTGTA-CCATTCTTTAACGGAATATGTGAAGGTTCTTGTTTTTACCATAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCAGCACGTGCAAACAAAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTTTGCTGTAGCGAAGCGAACGGTGTTCGAACATA-CACGGTTGATTGTTGGTAG-----TCATTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCAAG-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATGA------T--------T-------TT-------TTCACCA-AGTTCCATGCATCCCCGACACCTTATTCCTAGCACTAAGGTAATGATTGTTATATAATTCCTTAGGGATTTTCAATGC---CTACAGTCCCCATAAATCGAACAT---ATATGCTACGGTTATTGATCTGTCCGGCAGGCTC---AAACA---------TGGTCCACAAATGGT-------------GA----------------------A---------------GTCCGAACGTTTTTTTCGGCATGGGTTGACCGGTTCGACAGAGGTCATTAGCCCGATCTCGAACTTGAACTCGGG--TTTTCTGCAAG-GTTTATGGTCAGA--TAAATCAATT---GGTGTAA-GAAAACTAATTCATAACCA----------T----------ATACTTAGGGA-TTTAGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCAGACCAAAAA-AGCTGTTTTTTATCGATTTCAACACGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATT-ATTTAGAAAAACATGTTTATTTTCTGGATATTACAACCAATACTTTTCAAACATTTGTTCTTGACCCGTGCGTCACGTTCACGCATGG----TAAACACACCACAT---TCT-AAGAAATTGTTTCTATGACCACGGGGCTGATTTTTACTACATTATTTAACATATTTTTAATA-AAACAATCCGTAC
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAATTAAGGAAAAACTTGGTTTTTGGCCACCTTCGGACCAAAAATATCTGTTTTTCATCAATTTCAACCCGTTC
gi|21                         :                                                        GTGATTTAATTTTTC-CGTCGCCTCAC-AGTGTCCAACCCGAAATTGGTACCAGCTGGCGCCGCCTAGCGGTGAGttt
gi|22                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       tA----------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCa
gi|3                          :                                                      ctGTGATTTAATTTTTC-CGTTGCTTCAC-AGGCTCCAACCCAAAATTCAGACCCACTGGCACTGCTTAGCTGTGAGATGATTGAACCATTTAGGCATTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAAA---TCAAAGTTCATTATTTTCAACAAGTTCCACAGACCTTAATATTAGGTCTACAATTCTG--ATTTTTGTA-CCATTCTTTAGCGGAACATGAATAGATTCTTGTTTTTACCACAAATAAATTTGTAAA--CTCGTTAAA----GACCAGTGCAGCACGTGCAAACATAGTACCTAAACGCAG-AAATAAATTTTATTTTTACTCTTTTTGCTGAAG-A--GC--CTGGTGTTCAAACATG-CATGTGTGGTTGTTGGCAG-----TCATTCAATTCGTACAGTGGACATATAGGTACACTCTGATATCCAGATTGATGGGTTCCGATTAAG-TA-----TTTTC-------GAAAAAA--TCTCATACCAACAAATATGA----TTTATTCAAA-T-------TT-------TTTACCA-TGTTCCATGCATCCGGGGCACCTTATTCCTAGCGCTAATGAGATGATTGTTACATCATTTCTTAGGGATTTCCAATGA---CTACAGTCTACAGAAATCAAACATATCATATACTACAGTTATTGACCTGTCCGGTAGGCTG---AAACA---------TCCCTTAGAAATAGT-------------TATTTTT-----------------AGCTAAAAACAATTATGTTCGAACG-GTTTTTTGGCATGGGTTGACCGGTTTGCCAGAGGTCATTAGCCCGATCTCGAACTTTTACTTGGG--TTTTCTACAAG-GTTTATAAATAAAACTATAGTCATTAAAGGTCTAATGAAAAAAAA
gi|4                          :                                                                                                                                                                                                                                                                  aagtTCACGGCTTTTCACGGC-TTTTTTT-TAGAAAAAGTCAAATTCCATAATTTTCAAAAAGTTCCACAGACTTCAATATTTGGTCGACAGGTCTG--TTTTTTGTA-CCATTCTTTATCGGAACATTTTTATTTTCTTGTTTTTACCACAGATAGTTTT-TAAAAATATATTAAA----GACCCGTGAGACACGGACAAACATAGAACCTAAACGCAG-AAATCAATTTTATGTTCACTATTTTTACTGTAGCG---C--ACGTGCTTCAAACATG-CACATGTGGTTGTTGGTAC-----TCCTTCAATTCGTACAGGGAACATCTAGGTACACTCTGATATACAGATTGATAGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAT--TCACACACCGGCAAATATGAAATGTTCAAGA----T-------TT-------TTCACTA-TTCGCCACGCATCTCCGGGACCACATCGGTAGCACTAGGGA-ATGAGTTTTACATCATTCATTAGAAAAACCCAATGC---CAACATCCACTATCAATCGGATATATCATATACTACGGATATTGCCCTGTCCGGCATGCTC---GAAC-----------GCTCCAGAAATAGT-------------AATTTTGACGTTTATTTGCCTCAAA---------------GTCCGAACG-TTTTTACGGCAATGTTCGACCGGCTCGCCTTAGGTCATTAGCCTGGCCGGGAACTTTAACG-GTGTTTTTTCTGCAAT-GCTTATCGTTAGA--TAAAGCGATT---GATGTAA--AAAAACAATTCGAAAGCATATTATATATT----------ATAATTAGTGA-AGTAGGGTCATTTGAAATTAAGGAAAAAaaac
gi|5                          :                                               caagtattaGTGATTTAATTTTTTTCGCGACCTCAC-AGGCTCCAACCCGAAACTCGGACCCACTGTCGCCGCCTAGCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCGCTGC-----ACGGCATTTTTTTTCCGAAA---TCAAAGTTCATCATTTTCAACAAGTTCCACATACCTTAATATTGGGTCTACAATTCTG--ACTTTTGTA-CCATTCTTTAGCGGAACATGTACAGGTTCTTGTTTTTACCACAAATAATTTTGC-CGAATTCATTAACGGGTGACCCGTTCAGCACGTGCAAACATAGTACCTTAGCGCAGAAAATAAATTTTA-----ATTGTTTTTGCTGTGGC---AC--AC-GAGTTCGAACATGCCAC-GGTGGTTGTTGGTaacactacgtacaa
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           agaGGTTGATGGGTTCCGAT-AAG-TA-----ATTTC-------GAAAAAA--T---------------ATGA----TTT--------T-------TTCAAAATTTTTACCA-TGTTCCACGCATCCC-GGCACATTATTCCTAGCATTAGGGAAGTGATTTT-ACATCATTCTTTAGGAATTTCCAATGC---CTACAGTCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTG---------------AAACA---------TGCTCCAGAAATATT-------------CA----------------------A---------------tgatgggttccgataagtaatttcgaaaaaatatgattttttcaaaatttttaccatgttccacgcatcccggcacattattcctagcattagggaagtgattttacatcattctttaggaatttccaatgcctacagtccccagaaatcaaacatatcatatactacggttattgacctgaaacatgctccagaaatattcaatttttgctcaaag
gi|6                          : agagtgatttaatttttttcgcgacctcacaggctccaacccgaaactcggacccactgtcgccgcctagcggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctctacaagtcgctgcacggcattttttttccgaaatcaaagttcatcattttcaacaagttccacataccttaatattgggtctacaattctgacttttgtaccattctttagcggaacatgtacaggttcttgtttttaccacaaataattttgccgaattcattaacgggtgacccgttcagcacgtgcaaacatagtaccttagcgcagaaaataaattttaattgtttttgctgtggcacacgagttcgaacatgccacggtggttgttGCAT-AAAT-AATTTTATTTTCACTCTTTTTTCTGTAGTG---C--ACGGGGTTCGAACATG-CATGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGTCATCTAGGTTTACTCTGATACCCAGATTGATGGGTTCCGAT-AAGATT-----TTTTT-------G-AAAAA--TCGCATACCGACAAATATGA-----TT--------T-------TT-------TTCAAAATTGTT--AC-CATGCCTGGCAGCTTATTCCTAGCACTGTGGAGGTGATATTTATATCATTCCTTAGGGATTTCTAATGA---ATACAGCCCCCAGAAATCAAACATATCATATAGTAC-GTTATTGACCTGTCCGATAGGCTCAAGAAACATTCATTTTTTGCT-CAAAAACGAC-------------TA----------------------A---------------GTCCGAACG-TTTTTTCGGCACGGGTTGACCtttttgctcaaag
gi|7                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             tttggttAATTTTATTTTCACTCTTTTTGCTGTAGCG---C--ACGAGGTTCGAACAAG-CATGGGTGGTTGTTGGTAG-----TCGTTCAACTCGTACAGGGGACATCTAGGTACACTCTGATACCCAGATTGATGGCTTCCGAT-AAG-TATTTTTTTTTT-------TAAAAAA--TCGCATACCGGCAAATATGA----TTT--------TTTCAAAATT-------TTGACCA-TGTTCCACGCATCCCTGACACCTTATTCCTAGTACTATGGAGGTGATATTTACACCATTCCTTAGGGATTTCTAATGCCTACTACAGCCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTGTCCGGTAGGCTG---AAACA---------TACTCAAGAAATATT-------------CATTTTTT----------------G---------------CTCCGAACG-TTTTTTCAGTATGGGTTGACC
gi|8                          :                                                                                                                                                                                                                                                                                                                                                                tTG--TTTCTTGTA-CCATTTTTTATCGGAACATGTATATTTTCTTGATTTTACCACAAATAGTTTTTTAAAAAAATAATAAG----GACCCGTGCGACAAAGCCAAACATAGAACCTAAACGCAG-AAATCAATTTTATTTTCACTCTTTTTACTGTAGC---GT--AAGTGCTTCAAACATG-CACATGCGGTTGTTGGTAC-----TCCTTCAACTCGTACAGGGAACATCTAGGTGCACTATGATATACAGATTGAT------------AG-TA-----TTTTC-------GAAATAA--TCACACTCCGGCAAATATGAAATGTTCAAGA----T-------TT-------TTTACCA-TGTGCCACGCATTTCCGGGACCTTATCGGTAGCACTAGGG-GATGAT
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGTTTCGACAGATGTCATTAGCCCGATCTCGAACATAAACTCGGG--TTTTCTGCAAG-GTTTATGGTCTGA--TAAAGCAATT---GGAGTAA-GAAAA-TAATTCTTAACCA----------T----------ATACTTAGTGAATA-AGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAATCCGTGACCAAATCTTTATTAATTCACATAAACGGTTTAATTTGGTATCATT-ATT





Alignments
lowQualScore                  :                                                                                                                                                          999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999                 22222    11             222                                                                                                                                                                                                                           2222                                                                                                                 11111     1111111                             55555555555555555555555555555555555555555                                                                                    111                                                               111    222222222                 9999999999999999999999999999999999999999                                                                                                            1111111   111                       1111    6666666666666666                                                                                                                                                                                                                                       1        3333    1   2222                                                          11             
lowQualScore                  :                                                                     8   3   3      8                                                                     666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666                 00000    22       5     111      0                            2        1         1    66      3   3     3     0          0  11                          8     6         7777                          0            3    2                1            9999 44                3     0             88888                                                              4   4  11111     4444444       66  1   2             44444444444444444444444444444444444444444      5              3                     0  00                                    000            0     1                                   0     0  000    222222222    3         66 6666666666666666666666666666666666666666         5                                                 0          77   77           5      0  0         8888888   000       5     11     1  4444 1  6666666666666666   1       6  3                              1              0         7                       1                                                         1   2    4 4                                 3                   1     1       5   3  6 5555    5   4444                                       1               1  66 1           
lowQualScore                  :                                                                     .   .   .      .                                                                     ................................................................................................                 .....    ..       .     ...      .                            .        .         .    ..      .   .     .     .          .  ..                          .     .         ....                          .            .    .                .            .... ..                .     .             .....                                                              .   .  .....     .......       ..  .   .             .........................................      .              .                     .  ..                                    ...            .     .                                   .     .  ...    .........    .         .. ........................................         .                                                 .          ..   ..           .      .  .         .......   ...       .     ..     .  .... .  ................   .       .  .                              .              .         .                       .                                                         .   .    . .                                 .                   .     .       .   .  . ....    .   ....                                       .               .  .. .           
lowQualScore                  :                                                                     0   2   8      0                                                                     000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000                 33333    66       7     666      7                            2        0         3    11      6   6     6     5          4  55                          2     5         7777                          5            3    5                8            0000 22                1     8             33333                                                              4   4  11111     4444444       11  9   0             00000000000000000000000000000000000000000      0              4                     2  66                                    000            7     4                                   4     7  000    999999999    0         77 4444444444444444444444444444444444444444         7                                                 7          66   99           7      7  4         1111111   000       7     99     0  2222 0  0000000000000000   0       7  5                              0              2         0                       0                                                         0   5    0 0                                 0                   0     0       0   0  0 0000    0   5555                                       0               0  55 0           
consensus                     :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGTTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATGA----TTTA------T-------TT-------TT--------CACCAT-GTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTCAA---ACAT---------GCTCCAGAAATAGT-NA--TTTT------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAA----ACCA----------T-----ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAANATGTNTNCTTTCTGGATACTACAACCAATACTTTTCAAACNTTTGTCCTTGACCCGTGCGCCACGTNCACGCATGGTANACACACANACATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
Reference ( family-217 )      :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAATTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATGA----TTT-------T-------TT-------TT--------CACCAT-GTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTCAA---ACAT---------GCTCCAGAAATAGT-NA--TTTT------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAA----ANCA----------T-----ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGANAAACATGTTTATTTTCTGGATATTACAACCAATACTTTTCAAACATTTGTTCTTGACCCGTGCGNCACGTNCACGCATGGTAAACGCANAAATATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
gi|1                          :                                                      GTTATTTAATTTTTC-CGCCGCC-CATAAGTCTCCAACCCGGAATTTGGACCCACTGGCGCTGCCTAGCAGTGGAGACA
gi|1                          :                                                                                                                                                                                                                                                           tagtACAAGTCACGGCATTTCATG----TTTTTT-CACAA---GTCAAAGTTCACCATTTTCAACAAGTTCCACAGACCTTAATATTGGGTCTACAATTCTG--ATTTTG-GTA-CCATT-CTTTAGCGGAACATGTGTAGGTTCTGTTTTTTACAACAAATAATTTC-TAAAAATTCATTAAC----GACCCGTGCGGCACGTGCATACATGATACCTAAGCGCTA-AAATACATTTTAATTATACTATTTTTGCTGTAGCG---C--ACGGGGTTCGAACATG-CATGGGTGGCTGCTGGTAC-----TCGTTCAATTCGTACAGGGGACATCTATGCTCACTCTGGTACCCAGTTTTATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAAAATGA----TTT-------T-------TT-------TTTAATTTTTCACCAT-GTTCCACGCATCCCCGGCGCCTTATTCCTGGCACTAGGGAGGTGATTTTTACATCATTCCTTAGCGATTACCAATGC---CTACAGCCCCCATAA-TCAAACACATCATATACTACGGCTATTGACCTGTCCGGCAGGCCCAA---ACAT---------GGTCCAGAAATAGT-GA--TTTTTGGCTTGAA---------A---------------GTCCGAACG-TTTTTTCGGCATGGTTTGACCCGTTCCCCAGAGGTCATTAGCCCGATTTCAAACTTTAACCCGGG--TTTTCTGCAAG-GTTTATGGTCAGATAAAGC----C--ATT---GGTGTAA-GAAAAATAATGCTAA----ACCA----------T-----ACACTTAGCGA-TATAGGGTCATTTGAAATTAAGGAAAATCTGGGTTTTGGGCCATTTTCTGACCAAAAACAGCCGTTTTTCATCAATTTCAACACGCTCCAAATTCTTTATTATTTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAAAATGTATTCTTTCTGGATACTACAACCAATACTTTTCAAACCTTTGTCCTTGACCCGTGCGCCACGTGCACGCAT-GTACACAC-TAAATATGTCTAA--AAATTGTTTCTGTGACCACGGGGCTGATTTTCACTATATAATTTAACATATTTTTTATCTACACAATCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggacaacaagtcacggcatttcatgttttttcacaagtcaaagttcaccattttcaacaagttccacagaccttaatattgggtctacaattctgattttggtaccattctttagcggaacatgtgtaggttctgttttttacaacaaataatttctaaaaattcattaacgacccgtgcggcacgtgcatacatgatacctaagcgctaaaatacattttaattatactatttttgctgtagcgcacggggttcgaacatgcatgggtggctgctggtactcgttcaattcgtacaggggacatctatgctcactctggtacccagttttatgggttccgataagtattttcgaaaaaatcgcataccggcaaaaatgatttttttttaatttttcaccatgttccacgcatccccggcgccttattcctggcactagggaggtgatttttacatcattccttagcgattaccaatgcctacagcccccataatcaaacacatcatatactacggctattgacctgtccggcaggcccaaacatggtccagaaatagtgatttttggcttgaaagtccgaacgttttttcggcatggtttgacccgttccccagaggtcattagcccgatttcaaactttaacccgggttttctgcaaggtttatggtcagataaagccattggtgtaagaaaaataatgctaaaccatacacttagcgatatagggtcatttgaaattaaggaaaatctgggttttgggccattttctgaccaaaaacagccgtttttcatcaatttcaacacgctccaaattctttattatttcacataaacggctgattttggtatcattatttagagaaaaatgtattctttctggatactacaaccaatacttttcaaacctttgtccttgacccgtgcgccacgtgcacgcatgtacacactaaatatgtctaaaaattgtttctgtgaccacggggctgattttcactatataatttaacatattttttatctacacaatccacac
gi|10                         :                                                                                                                                                       tagtgttatttaatttttccgccgcccataagtctccaacccggaatttggacccactggcgctgcctagcagtggagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggaca--ATTGTT-GTA-CCATT-CTTTAGCGGAATATGTGTTAATTCATGTTTTAACCACAAATAAGTTTGCAAAG-TTCATTAAC----AACCCGTGCAATACGTGTAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGATAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATGTCGTACCCAGATTGATG
gi|11                         :                                                                                                                                                                                                                                                                                                                                                                     TTTG-GTAGCCATT-CTTTAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCAAAA-TTCATTAAC----GACCCGTGCAATACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCCAGATTGATG
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                        g-GTA-CCATT-CTTAAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCTAAA-TTCATTAAC----AACCCGTGTAATACGTGCAAACATAGTACCTAAGCACAA-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TTGTGTAATTCGTACAGGGGACATCTAGGAACAATCTCGTACCCAGATTGATG
gi|13                         :                                                                                                                                                                                                                                                                    TCACGGCTTTTCACAG--TTTTTTT-TAGAAAAAGTCAAATTTCATCATTTTCAACAAGTTCCACAAAATTCAATACATGGTCTACAGGTCTGTTATTTTT-GTA-CCATT-CTTTATCTGAACATGTATATTGTCTTGTTTTTACCACAAATAGTTTT-CAAAAAAATATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAA
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 caagtattaCCGTAGCG---C--ACATACTTCCAACATG-CACGGAT-GTTGTTGGTAAACTACTTGTTAAAATCGTACAA-------------ACACTCTGATATACAGATTAGTAGGTTCCAAT-AAG-TA-----TTTTTTGAAGAAGAAAAAAACTCTCAT--CTGCAAATATGA----
gi|15                         :                                                                                                                                                                                                                                                                                            aaaatttaacttattaagtatgtctgaatatctgaTTACACAGAC--------TTGGTCTACAGGTCTG--TTTTTTTGTA-CCATTTCTTTATCTGAACATGTTTATTGTCTTGTTTTTACCACAAATAGTTTTTAAAAAAAT-ATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAaatttcatgat
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     aaactATTAGCCTGGTCTGGAACTTTAACGGTGT--TTTTCTGCAAATGCTTATGGTTAGATAAAGC----G--ATT---GATGTAA-GAAAAACAATTCGAAGCATATTA----------TATATAATAATTAGTGA-TGTAGTGTCATTTGAAATTAAGGAAAA
gi|17                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       tcaATTAGCCTGACCTGGAACTTTAACGGCGT--TTTTCTGCAAT-GCTTATGGTTAGATAAAGT----G--ATT---GGTGTAA-GAAAAACAATTCGAA----AGCATAATATATATT-----ATGATTAGTGA-TGAAGTGTCATTTGAAATTAAGGAAAAA
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   aAATTTTATTTTCACTCATTTTGCTGTAGTG---C--ATGGGGTTCGAACATA-CACGGTTGGTTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCAAGATTGATG
gi|19                         :                                                                                                                                                                                                                                                                    TCACGGCTTTTCACAGC--TTTTTT-TAGAAAAAGTCAAATTTCTTCATTTTCAAAAAGTTCCACAGACTTTA
gi|2                          :                                             caagtattaGTCATTTAATTTGTC-CGTGGCCCCTAAGG-CTCCAACGCGAAACTCGGACCCGCTGGCACCGCTTAGCGAAGAGGACATTGAACCATTTAGGCATCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAA---GTCAAAGTTCATCATTTTCAACAAGTGCCACAGACCTTAATATTAGGTCTACTATTCTG--ATTTTT-GTA-CCATT-CTTTAACGGAATATGTGAAGGTTCTTGTTTTTACCATAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCAGCACGTGCAAACAAAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTTTGCTGTAGCGAAGCGAACGGTGTTCGAACATA-CACGGTTGATTGTTGGTAG-----TCATTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCAAG-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATGA------T-------T-------TT-------TT--------CACCAA-GTTCCATGCATCCCCGACACCTTATTCCTAGCACTAAGGTAATGATTGTTATATAATTCCTTAGGGATTTTCAATGC---CTACAGTCCCCATAAATCGAACAT---ATATGCTACGGTTATTGATCTGTCCGGCAGGCTCAA---ACAT---------GGTCCACAAATGGT-GA------------------------A---------------GTCCGAACGTTTTTTTCGGCATGGGTTGACCGGTTCGACAGAGGTCATTAGCCCGATCTCGAACTTGAACTCGGG--TTTTCTGCAAG-GTTTATGGTCAGATAAATC----A--ATT---GGTGTAA-GAAAACTAATTCATA----ACCA----------T-----ATACTTAGGGA-TTTAGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCAGACCAAAAA-AGCTGTTTTTTATCGATTTCAACACGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAAAAACATGTTTATTTTCTGGATATTACAACCAATACTTTTCAAACATTTGTTCTTGACCCGTGCGTCACGTTCACGCATGGTAAACACAC-CACAT-TCT-AAGAAATTGTTTCTATGACCACGGGGCTGATTTTTACTACATTATTTAACATATTTTTAATA-AAACAATCCGTAC
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAATTAAGGAAAAACTTGGTTTTTGGCCACCTTCGGACCAAAAATATCTGTTTTTCATCAATTTCAACCCGTTC
gi|21                         :                                                      GTGATTTAATTTTTC-CGTCGCCTCACAGT-GTCCAACCCGAAATTGGTACCAGCTGGCGCCGCCTAGCGGTGAGttt
gi|22                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         t------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCa
gi|3                          :                                                   ctaGTGATTTAATTTTTC-CGTTGCTTCACAGG-CTCCAACCCAAAATTCAGACCCACTGGCACTGCTTAGCTGTGAGATGATTGAACCATTTAGGCATTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAAA---TCAAAGTTCATTATTTTCAACAAGTTCCACAGACCTTAATATTAGGTCTACAATTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGAATAGATTCTTGTTTTTACCACAAATAAATTTGTAAA--CTCGTTAAA----GACCAGTGCAGCACGTGCAAACATAGTACCTAAACGCAG-AAATAAATTTTATTTTTACTCTTTTTGCTGAAG-A--GC--CTGGTGTTCAAACATG-CATGTGTGGTTGTTGGCAG-----TCATTCAATTCGTACAGTGGACATATAGGTACACTCTGATATCCAGATTGATGGGTTCCGATTAAG-TA-----TTTTC-------GAAAAAA--TCTCATACCAACAAATATGA----TTTATTCAAAT-------TT-------TT--------TACCAT-GTTCCATGCATCCGGGGCACCTTATTCCTAGCGCTAATGAGATGATTGTTACATCATTTCTTAGGGATTTCCAATGA---CTACAGTCTACAGAAATCAAACATATCATATACTACAGTTATTGACCTGTCCGGTAGGCTGAA---ACAT---------CCCTTAGAAATAGT-TAT-TTTT------------------AGCTAAAAACAATTATGTTCGAACG-GTTTTTTGGCATGGGTTGACCGGTTTGCCAGAGGTCATTAGCCCGATCTCGAACTTTTACTTGGG--TTTTCTACAAG-GTTTAT----AAATAAAACTATAGTCATTAAAGGTCTAATGAAAAAAAA
gi|4                          :                                                                                                                                                                                                                                                                aagtTCACGGCTTTTCACGGC-TTTTTTT-TAGAAAAAGTCAAATTCCATAATTTTCAAAAAGTTCCACAGACTTCAATATTTGGTCGACAGGTCTG--TTTTTT-GTA-CCATT-CTTTATCGGAACATTTTTATTTTCTTGTTTTTACCACAGATAGTTTT-TAAAAATATATTAAA----GACCCGTGAGACACGGACAAACATAGAACCTAAACGCAG-AAATCAATTTTATGTTCACTATTTTTACTGTAGCG---C--ACGTGCTTCAAACATG-CACATGTGGTTGTTGGTAC-----TCCTTCAATTCGTACAGGGAACATCTAGGTACACTCTGATATACAGATTGATAGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAT--TCACACACCGGCAAATATGAAATGTTCAAGA---T-------TT-------TT--------CACTAT-TCGCCACGCATCTCCGGGACCACATCGGTAGCACTAGGGA-ATGAGTTTTACATCATTCATTAGAAAAACCCAATGC---CAACATCCACTATCAATCGGATATATCATATACTACGGATATTGCCCTGTCCGGCATGCTCGA---AC-----------GCTCCAGAAATAGT-AA--TTTTGACGTTTATTTGCCTCAAA---------------GTCCGAACG-TTTTTACGGCAATGTTCGACCGGCTCGCCTTAGGTCATTAGCCTGGCCGGGAACTTTAACG-GTGTTTTTTCTGCAAT-GCTTATCGTTAGATAAAGC----G--ATT---GATGTAA--AAAAACAATTCGAA----AGCATATTATATATT-----ATAATTAGTGA-AGTAGGGTCATTTGAAATTAAGGAAAAAaaac
gi|5                          :                                             caagtattaGTGATTTAATTTTTTTCGCGACCTCACAGG-CTCCAACCCGAAACTCGGACCCACTGTCGCCGCCTAGCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCGCTGC-----ACGGCATTTTTTTTCCGAAA---TCAAAGTTCATCATTTTCAACAAGTTCCACATACCTTAATATTGGGTCTACAATTCTG--ACTTTT-GTA-CCATT-CTTTAGCGGAACATGTACAGGTTCTTGTTTTTACCACAAATAATTTTGC-CGAATTCATTAACGGGTGACCCGTTCAGCACGTGCAAACATAGTACCTTAGCGCAGAAAATAAATTTTA-----ATTGTTTTTGCTGTGGC---AC--AC-GAGTTCGAACATGCCAC-GGTGGTTGTTGGTaacactacgtacaa
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           agaGGTTGATGGGTTCCGAT-AAG-TA-----ATTTC-------GAAAAAA--T---------------ATGA----TTT-------T-------TTCAAAATTTT--------TACCAT-GTTCCACGCATCCC-GGCACATTATTCCTAGCATTAGGGAAGTGATTTT-ACATCATTCTTTAGGAATTTCCAATGC---CTACAGTCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTG------------AA---ACAT---------GCTCCAGAAATATTCAA--TTTT------------------T---------------GCTCAAAtgatgggttccgataagtaatttcgaaaaaatatgattttttcaaaatttttaccatgttccacgcatcccggcacattattcctagcattagggaagtgattttacatcattctttaggaatttccaatgcctacagtccccagaaatcaaacatatcatatactacggttattgacctgaaacatgctccagaaatattcaatttttgctcaaag
gi|6                          : agagtgatttaatttttttcgcgacctcacaggctccaacccgaaactcggacccactgtcgccgcctagcggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctctacaagtcgctgcacggcattttttttccgaaatcaaagttcatcattttcaacaagttccacataccttaatattgggtctacaattctgacttttgtaccattctttagcggaacatgtacaggttcttgtttttaccacaaataattttgccgaattcattaacgggtgacccgttcagcacgtgcaaacatagtaccttagcgcagaaaataaattttaattgtttttgctgtggcacacgagttcgaacatgccacggtggttgttGCAT-AAAT-AATTTTATTTTCACTCTTTTTTCTGTAGTG---C--ACGGGGTTCGAACATG-CATGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGTCATCTAGGTTTACTCTGATACCCAGATTGATGGGTTCCGAT-AAGATT-----TTTTT-------GAAAAA---TCGCATACCGACAAATATGA----TTT-------T-------TT-------T---------CAAAATTGTT--AC-CATGCCTGGCAGCTTATTCCTAGCACTGTGGAGGTGATATTTATATCATTCCTTAGGGATTTCTAATGA---ATACAGCCCCCAGAAATCAAACATATCATATAGTACG-TTATTGACCTGTCCGATAGGCTCAAGAAACATTCATTTTTTGCTC-AAAAACGAC-TA------------------------A---------------GTCCGAACG-TTTTTTCGGCACGGGTTGACCg
gi|7                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             tttggttAATTTTATTTTCACTCTTTTTGCTGTAGCG---C--ACGAGGTTCGAACAAG-CATGGGTGGTTGTTGGTAG-----TCGTTCAACTCGTACAGGGGACATCTAGGTACACTCTGATACCCAGATTGATGGCTTCCGAT-AAG-TATTTTTTTTTT-------TAAAAAA--TCGCATACCGGCAAATATGA----TTT-------TTTCAAAATT-------TT--------GACCAT-GTTCCACGCATCCCTGACACCTTATTCCTAGTACTATGGAGGTGATATTTACACCATTCCTTAGGGATTTCTAATGCCTACTACAGCCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTGTCCGGTAGGCTGAA---ACAT---------ACTCAAGAAATATT-CATTTTTT------------------G---------------CTCCGAACG-TTTTTTCAGTATGGGTTGACC
gi|8                          :                                                                                                                                                                                                                                                                                                                                                              tTG--TTTCTT-GTA-CCATT-TTTTATCGGAACATGTATATTTTCTTGATTTTACCACAAATAGTTTTTTAAAAAAATAATAAG----GACCCGTGCGACAAAGCCAAACATAGAACCTAAACGCAG-AAATCAATTTTATTTTCACTCTTTTTACTGTAGC---GT--AAGTGCTTCAAACATG-CACATGCGGTTGTTGGTAC-----TCCTTCAACTCGTACAGGGAACATCTAGGTGCACTATGATATACAGATTGAT------------AG-TA-----TTTTC-------GAAATAA--TCACACTCCGGCAAATATGAAATGTTCAAGA---T-------TT-------TT--------TACCAT-GTGCCACGCATTTCCGGGACCTTATCGGTAGCACTAGGG-GATGAT
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGTTTCGACAGATGTCATTAGCCCGATCTCGAACATAAACTCGGG--TTTTCTGCAAG-GTTTATGGTCTGATAAAGC----A--ATT---GGAGTAA-GAAAA-TAATTCTTA----ACCA----------T-----ATACTTAGTGAATA-AGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAATCCGTGACCAAATCTTTATTAATTCACATAAACGGTTTAATTTGGTATCATTATT





Alignments
lowQualScore                  :                                                                                                                                                          999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999                 22222    11             222                                                                                                                                                                                                                           2222                                                                                                                 11111     1111111                             77777777777777   111111                                                                                       111                                                            1111     222222222                  9999999999999999999999999999999999999999                                                                                                            1111111   111                            7777777777777777777                                                                                                                                                                                                                                       1        3333    1   2222                                                          11             
lowQualScore                  :                                                                     8   3   3      8                                                                     666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666                 00000    22       5     111      0                            2        1         1    66      3   3     3     0          0  11                          8     6         7777                          0            3    2                1            9999 44                3     0             88888                                                              4   4  11111     4444444       66  1   2             55555555555555   444444   3    5               3                     0  00                                    000            0     1                                   0     0000     222222222               66 6666666666666666666666666666666666666666         5                                                 0          77   77           5      0  0         8888888   000       5     11     1    6  3333333333333333333   1       6  3                              1              0         7                       1                                                             1    1 1                                 1                         1       5   1    0000    5   4444                                       1               1  66 1           
lowQualScore                  :                                                                     .   .   .      .                                                                     ................................................................................................                 .....    ..       .     ...      .                            .        .         .    ..      .   .     .     .          .  ..                          .     .         ....                          .            .    .                .            .... ..                .     .             .....                                                              .   .  .....     .......       ..  .   .             ..............   ......   .    .               .                     .  ..                                    ...            .     .                                   .     ....     .........               .. ........................................         .                                                 .          ..   ..           .      .  .         .......   ...       .     ..     .    .  ...................   .       .  .                              .              .         .                       .                                                             .    . .                                 .                         .       .   .    ....    .   ....                                       .               .  .. .           
lowQualScore                  :                                                                     0   2   8      0                                                                     000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000                 33333    66       7     666      7                            2        0         3    11      6   6     6     5          4  55                          2     5         7777                          5            3    5                8            0000 22                1     8             33333                                                              4   4  11111     4444444       11  9   0             33333333333333   444444   4    0               4                     2  66                                    000            7     4                                   4     7777     999999999               77 4444444444444444444444444444444444444444         7                                                 7          66   99           7      7  4         1111111   000       7     99     0    7  5555555555555555555   0       7  5                              0              2         0                       0                                                             0    0 0                                 0                         0       0   0    0000    0   5555                                       0               0  55 0           
consensus                     :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGTTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATGA----TTT--T----ATT------TTTCACCA-TGTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTC---AAACA---------TGCTCCAGAAATAGT-NA--TTTT------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAAAC-CA----------T--------ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAANATGTNTNCTTTCTGGATACTACAACCAATACTTTTCAAACNTTTGTCCTTGACCCGTGCGCCACGTNCACGCATGGTANACACACANACATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
Reference ( family-217 )      :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGTTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATGA----TTT-------ATT------TTTCACCA-TGTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTC---AAACA---------TGCTCCAGAAATAGT-NA--TTTT------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAAAC-CA----------T--------ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAANATGTNTNCTTTCTGGATACTACAACCAATACTTTTCAAACNTTTGTCCTTGACCCGTGCGCCACGTNCACGCATGGTANACACACANACATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
gi|1                          :                                                      GTTATTTAATTTTTC-CGCCGCC-CATAAGTCTCCAACCCGGAATTTGGACCCACTGGCGCTGCCTAGCAGTGGAGACA
gi|1                          :                                                                                                                                                                                                                                                           tagtACAAGTCACGGCATTTCATG----TTTTTT-CACAA---GTCAAAGTTCACCATTTTCAACAAGTTCCACAGACCTTAATATTGGGTCTACAATTCTG--ATTTTG-GTA-CCATT-CTTTAGCGGAACATGTGTAGGTTCTGTTTTTTACAACAAATAATTTC-TAAAAATTCATTAAC----GACCCGTGCGGCACGTGCATACATGATACCTAAGCGCTA-AAATACATTTTAATTATACTATTTTTGCTGTAGCG---C--ACGGGGTTCGAACATG-CATGGGTGGCTGCTGGTAC-----TCGTTCAATTCGTACAGGGGACATCTATGCTCACTCTGGTACCCAGTTTTATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAAAATGA----TTTTTTTTTAATT------TTTCACCA-TGTTCCACGCATCCCCGGCGCCTTATTCCTGGCACTAGGGAGGTGATTTTTACATCATTCCTTAGCGATTACCAATGC---CTACAGCCCCCATAA-TCAAACACATCATATACTACGGCTATTGACCTGTCCGGCAGGCCC---AAACA---------TGGTCCAGAAATAGT-GA--TTTTTGGCTTGAA---------A---------------GTCCGAACG-TTTTTTCGGCATGGTTTGACCCGTTCCCCAGAGGTCATTAGCCCGATTTCAAACTTTAACCCGGG--TTTTCTGCAAG-GTTTATGGTCAGATAAAGC----C--ATT---GGTGTAA-GAAAAATAATGCTAAAC-CA----------T--------ACACTTAGCGA-TATAGGGTCATTTGAAATTAAGGAAAATCTGGGTTTTGGGCCATTTTCTGACCAAAAACAGCCGTTTTTCATCAATTTCAACACGCTCCAAATTCTTTATTATTTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAAAATGTATTCTTTCTGGATACTACAACCAATACTTTTCAAACCTTTGTCCTTGACCCGTGCGCCACGTGCACGCAT-GTACACAC-TAAATATGTCTAA--AAATTGTTTCTGTGACCACGGGGCTGATTTTCACTATATAATTTAACATATTTTTTATCTACACAATCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggacaacaagtcacggcatttcatgttttttcacaagtcaaagttcaccattttcaacaagttccacagaccttaatattgggtctacaattctgattttggtaccattctttagcggaacatgtgtaggttctgttttttacaacaaataatttctaaaaattcattaacgacccgtgcggcacgtgcatacatgatacctaagcgctaaaatacattttaattatactatttttgctgtagcgcacggggttcgaacatgcatgggtggctgctggtactcgttcaattcgtacaggggacatctatgctcactctggtacccagttttatgggttccgataagtattttcgaaaaaatcgcataccggcaaaaatgatttttttttaatttttcaccatgttccacgcatccccggcgccttattcctggcactagggaggtgatttttacatcattccttagcgattaccaatgcctacagcccccataatcaaacacatcatatactacggctattgacctgtccggcaggcccaaacatggtccagaaatagtgatttttggcttgaaagtccgaacgttttttcggcatggtttgacccgttccccagaggtcattagcccgatttcaaactttaacccgggttttctgcaaggtttatggtcagataaagccattggtgtaagaaaaataatgctaaaccatacacttagcgatatagggtcatttgaaattaaggaaaatctgggttttgggccattttctgaccaaaaacagccgtttttcatcaatttcaacacgctccaaattctttattatttcacataaacggctgattttggtatcattatttagagaaaaatgtattctttctggatactacaaccaatacttttcaaacctttgtccttgacccgtgcgccacgtgcacgcatgtacacactaaatatgtctaaaaattgtttctgtgaccacggggctgattttcactatataatttaacatattttttatctacacaatccacac
gi|10                         :                                                                                                                                                       tagtgttatttaatttttccgccgcccataagtctccaacccggaatttggacccactggcgctgcctagcagtggagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggaca--ATTGTT-GTA-CCATT-CTTTAGCGGAATATGTGTTAATTCATGTTTTAACCACAAATAAGTTTGCAAAG-TTCATTAAC----AACCCGTGCAATACGTGTAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGATAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATGTCGTACCCAGATTGATG
gi|11                         :                                                                                                                                                                                                                                                                                                                                                                     TTTG-GTAGCCATT-CTTTAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCAAAA-TTCATTAAC----GACCCGTGCAATACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCCAGATTGATG
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                        g-GTA-CCATT-CTTAAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCTAAA-TTCATTAAC----AACCCGTGTAATACGTGCAAACATAGTACCTAAGCACAA-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TTGTGTAATTCGTACAGGGGACATCTAGGAACAATCTCGTACCCAGATTGATG
gi|13                         :                                                                                                                                                                                                                                                                    TCACGGCTTTTCACAG--TTTTTTT-TAGAAAAAGTCAAATTTCATCATTTTCAACAAGTTCCACAAAATTCAATACATGGTCTACAGGTCTGTTATTTTT-GTA-CCATT-CTTTATCTGAACATGTATATTGTCTTGTTTTTACCACAAATAGTTTT-CAAAAAAATATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAA
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 caagtattaCCGTAGCG---C--ACATACTTCCAACATG-CACGGAT-GTTGTTGGTAAACTACTTGTTAAAATCGTACAA-------------ACACTCTGATATACAGATTAGTAGGTTCCAAT-AAG-TA-----TTTTTTGAAGAAGAAAAAAACTCTCAT--CTGCAAATATGA----
gi|15                         :                                                                                                                                                                                                                                                                                            aaaatttaacttattaagtatgtctgaatatctgaTTACACAGAC--------TTGGTCTACAGGTCTG--TTTTTTTGTA-CCATTTCTTTATCTGAACATGTTTATTGTCTTGTTTTTACCACAAATAGTTTTTAAAAAAAT-ATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAaatttcatgat
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aaactATTAGCCTGGTCTGGAACTTTAACGGTGT--TTTTCTGCAAATGCTTATGGTTAGATAAAGC----G--ATT---GATGTAA-GAAAAACAATTCGAAGCATA----------TTATATATAATAATTAGTGA-TGTAGTGTCATTTGAAATTAAGGAAAA
gi|17                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        tcaATTAGCCTGACCTGGAACTTTAACGGCGT--TTTTCTGCAAT-GCTTATGGTTAGATAAAGT----G--ATT---GGTGTAA-GAAAAACAATTCGAAAG-CATAATATATATT--------ATGATTAGTGA-TGAAGTGTCATTTGAAATTAAGGAAAAA
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   aAATTTTATTTTCACTCATTTTGCTGTAGTG---C--ATGGGGTTCGAACATA-CACGGTTGGTTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCAAGATTGATG
gi|19                         :                                                                                                                                                                                                                                                                    TCACGGCTTTTCACAGC--TTTTTT-TAGAAAAAGTCAAATTTCTTCATTTTCAAAAAGTTCCACAGACTTTA
gi|2                          :                                             caagtattaGTCATTTAATTTGTC-CGTGGCCCCTAAGG-CTCCAACGCGAAACTCGGACCCGCTGGCACCGCTTAGCGAAGAGGACATTGAACCATTTAGGCATCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAA---GTCAAAGTTCATCATTTTCAACAAGTGCCACAGACCTTAATATTAGGTCTACTATTCTG--ATTTTT-GTA-CCATT-CTTTAACGGAATATGTGAAGGTTCTTGTTTTTACCATAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCAGCACGTGCAAACAAAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTTTGCTGTAGCGAAGCGAACGGTGTTCGAACATA-CACGGTTGATTGTTGGTAG-----TCATTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCAAG-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATGA----T----------TT------TTTCACCA-AGTTCCATGCATCCCCGACACCTTATTCCTAGCACTAAGGTAATGATTGTTATATAATTCCTTAGGGATTTTCAATGC---CTACAGTCCCCATAAATCGAACAT---ATATGCTACGGTTATTGATCTGTCCGGCAGGCTC---AAACA---------TGGTCCACAAATGGT-GA------------------------A---------------GTCCGAACGTTTTTTTCGGCATGGGTTGACCGGTTCGACAGAGGTCATTAGCCCGATCTCGAACTTGAACTCGGG--TTTTCTGCAAG-GTTTATGGTCAGATAAATC----A--ATT---GGTGTAA-GAAAACTAATTCATAAC-CA----------T--------ATACTTAGGGA-TTTAGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCAGACCAAAAA-AGCTGTTTTTTATCGATTTCAACACGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAAAAACATGTTTATTTTCTGGATATTACAACCAATACTTTTCAAACATTTGTTCTTGACCCGTGCGTCACGTTCACGCATGGTAAACACAC-CACAT-TCT-AAGAAATTGTTTCTATGACCACGGGGCTGATTTTTACTACATTATTTAACATATTTTTAATA-AAACAATCCGTAC
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAATTAAGGAAAAACTTGGTTTTTGGCCACCTTCGGACCAAAAATATCTGTTTTTCATCAATTTCAACCCGTTC
gi|21                         :                                                      GTGATTTAATTTTTC-CGTCGCCTCACAGT-GTCCAACCCGAAATTGGTACCAGCTGGCGCCGCCTAGCGGTGAGttt
gi|22                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          t------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCa
gi|3                          :                                                   ctaGTGATTTAATTTTTC-CGTTGCTTCACAGG-CTCCAACCCAAAATTCAGACCCACTGGCACTGCTTAGCTGTGAGATGATTGAACCATTTAGGCATTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAAA---TCAAAGTTCATTATTTTCAACAAGTTCCACAGACCTTAATATTAGGTCTACAATTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGAATAGATTCTTGTTTTTACCACAAATAAATTTGTAAA--CTCGTTAAA----GACCAGTGCAGCACGTGCAAACATAGTACCTAAACGCAG-AAATAAATTTTATTTTTACTCTTTTTGCTGAAG-A--GC--CTGGTGTTCAAACATG-CATGTGTGGTTGTTGGCAG-----TCATTCAATTCGTACAGTGGACATATAGGTACACTCTGATATCCAGATTGATGGGTTCCGATTAAG-TA-----TTTTC-------GAAAAAA--TCTCATACCAACAAATATGA----TTT-------ATTCAAATTTTTTACCA-TGTTCCATGCATCCGGGGCACCTTATTCCTAGCGCTAATGAGATGATTGTTACATCATTTCTTAGGGATTTCCAATGA---CTACAGTCTACAGAAATCAAACATATCATATACTACAGTTATTGACCTGTCCGGTAGGCTG---AAACA---------TCCCTTAGAAATAGT-TAT-TTTT------------------AGCTAAAAACAATTATGTTCGAACG-GTTTTTTGGCATGGGTTGACCGGTTTGCCAGAGGTCATTAGCCCGATCTCGAACTTTTACTTGGG--TTTTCTACAAG-GTTTAT----AAATAAAACTATAGTCATTAAAGGTCTAATGAAAAAAAA
gi|4                          :                                                                                                                                                                                                                                                                aagtTCACGGCTTTTCACGGC-TTTTTTT-TAGAAAAAGTCAAATTCCATAATTTTCAAAAAGTTCCACAGACTTCAATATTTGGTCGACAGGTCTG--TTTTTT-GTA-CCATT-CTTTATCGGAACATTTTTATTTTCTTGTTTTTACCACAGATAGTTTT-TAAAAATATATTAAA----GACCCGTGAGACACGGACAAACATAGAACCTAAACGCAG-AAATCAATTTTATGTTCACTATTTTTACTGTAGCG---C--ACGTGCTTCAAACATG-CACATGTGGTTGTTGGTAC-----TCCTTCAATTCGTACAGGGAACATCTAGGTACACTCTGATATACAGATTGATAGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAT--TCACACACCGGCAAATATGAAATGTTCAAG----ATT------TTTCACTA-TTCGCCACGCATCTCCGGGACCACATCGGTAGCACTAGGGA-ATGAGTTTTACATCATTCATTAGAAAAACCCAATGC---CAACATCCACTATCAATCGGATATATCATATACTACGGATATTGCCCTGTCCGGCATGCTC---GAAC-----------GCTCCAGAAATAGT-AA--TTTTGACGTTTATTTGCCTCAAA---------------GTCCGAACG-TTTTTACGGCAATGTTCGACCGGCTCGCCTTAGGTCATTAGCCTGGCCGGGAACTTTAACG-GTGTTTTTTCTGCAAT-GCTTATCGTTAGATAAAGC----G--ATT---GATGTAA--AAAAACAATTCGAAAG-CATATTATATATT--------ATAATTAGTGA-AGTAGGGTCATTTGAAATTAAGGAAAAAaaac
gi|5                          :                                             caagtattaGTGATTTAATTTTTTTCGCGACCTCACAGG-CTCCAACCCGAAACTCGGACCCACTGTCGCCGCCTAGCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCGCTGC-----ACGGCATTTTTTTTCCGAAA---TCAAAGTTCATCATTTTCAACAAGTTCCACATACCTTAATATTGGGTCTACAATTCTG--ACTTTT-GTA-CCATT-CTTTAGCGGAACATGTACAGGTTCTTGTTTTTACCACAAATAATTTTGC-CGAATTCATTAACGGGTGACCCGTTCAGCACGTGCAAACATAGTACCTTAGCGCAGAAAATAAATTTTA-----ATTGTTTTTGCTGTGGC---AC--AC-GAGTTCGAACATGCCAC-GGTGGTTGTTGGTaacactacgtacaa
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           agaGGTTGATGGGTTCCGAT-AAG-TA-----ATTTC-------GAAAAAA--T---------------ATGA----TTTTTTCAAAATT------TTT-ACCA-TGTTCCACGCATCCC-GGCACATTATTCCTAGCATTAGGGAAGTGATTTT-ACATCATTCTTTAGGAATTTCCAATGC---CTACAGTCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTG---------------AAACA---------TGCTCCAGAAATATTCAA--TTTT------------------T---------------GCTCAAAtgatgggttccgataagtaatttcgaaaaaatatgattttttcaaaatttttaccatgttccacgcatcccggcacattattcctagcattagggaagtgattttacatcattctttaggaatttccaatgcctacagtccccagaaatcaaacatatcatatactacggttattgacctgaaacatgctccagaaatattcaatttttgctcaaag
gi|6                          : agagtgatttaatttttttcgcgacctcacaggctccaacccgaaactcggacccactgtcgccgcctagcggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctctacaagtcgctgcacggcattttttttccgaaatcaaagttcatcattttcaacaagttccacataccttaatattgggtctacaattctgacttttgtaccattctttagcggaacatgtacaggttcttgtttttaccacaaataattttgccgaattcattaacgggtgacccgttcagcacgtgcaaacatagtaccttagcgcagaaaataaattttaattgtttttgctgtggcacacgagttcgaacatgccacggtggttgttGCAT-AAAT-AATTTTATTTTCACTCTTTTTTCTGTAGTG---C--ACGGGGTTCGAACATG-CATGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGTCATCTAGGTTTACTCTGATACCCAGATTGATGGGTTCCGAT-AAGATT-----TTTTT-------G-AAAAA--TCGCATACCGACAAATATGA----TT---------TT------TTTCAAAATTGTT--AC-CATGCCTGGCAGCTTATTCCTAGCACTGTGGAGGTGATATTTATATCATTCCTTAGGGATTTCTAATGA---ATACAGCCCCCAGAAATCAAACATATCATATAGTAC-GTTATTGACCTGTCCGATAGGCTCAAGAAACATTCATTTTTTGCT-CAAAAACGAC-TA------------------------A---------------GTCCGAACG-TTTTTTCGGCACGGGTTGACCg
gi|7                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             tttggttAATTTTATTTTCACTCTTTTTGCTGTAGCG---C--ACGAGGTTCGAACAAG-CATGGGTGGTTGTTGGTAG-----TCGTTCAACTCGTACAGGGGACATCTAGGTACACTCTGATACCCAGATTGATGGCTTCCGAT-AAG-TATTTTTTTTTT-------TAAAAAA--TCGCATACCGGCAAATATGA----TTTTTTCAA-AAT------TTTGACCA-TGTTCCACGCATCCCTGACACCTTATTCCTAGTACTATGGAGGTGATATTTACACCATTCCTTAGGGATTTCTAATGCCTACTACAGCCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTGTCCGGTAGGCTG---AAACA---------TACTCAAGAAATATT-CATTTTTT------------------G---------------CTCCGAACG-TTTTTTCAGTATGGGTTGACC
gi|8                          :                                                                                                                                                                                                                                                                                                                                                              tTG--TTTCTT-GTA-CCATT-TTTTATCGGAACATGTATATTTTCTTGATTTTACCACAAATAGTTTTTTAAAAAAATAATAAG----GACCCGTGCGACAAAGCCAAACATAGAACCTAAACGCAG-AAATCAATTTTATTTTCACTCTTTTTACTGTAGC---GT--AAGTGCTTCAAACATG-CACATGCGGTTGTTGGTAC-----TCCTTCAACTCGTACAGGGAACATCTAGGTGCACTATGATATACAGATTGAT------------AG-TA-----TTTTC-------GAAATAA--TCACACTCCGGCAAATATGAAATGTTCAAG----ATT------TTTTACCA-TGTGCCACGCATTTCCGGGACCTTATCGGTAGCACTAGGG-GATGAT
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGTTTCGACAGATGTCATTAGCCCGATCTCGAACATAAACTCGGG--TTTTCTGCAAG-GTTTATGGTCTGATAAAGC----A--ATT---GGAGTAA-GAAAA-TAATTCTTAAC-CA----------T--------ATACTTAGTGAATA-AGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAATCCGTGACCAAATCTTTATTAATTCACATAAACGGTTTAATTTGGTATCATTATT





Alignments
lowQualScore                  :                                                                                                                                                          999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999                 22222    11             222                                                                                                                                                                                                                           2222                                                                                                                 11111     1111111                            666666666666666                                                                                          111                                                            1111     222222222                  9999999999999999999999999999999999999999                                                                                                            1111111   111                            7777777777777777777                                                                                                                                                                                                                                       1        3333    1   2222                                                          11             
lowQualScore                  :                                                                     8   3   3      8                                                                     666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666                 00000    22       5     111      0                            2        1         1    66      3   3     3     0          0  11                          8     6         7777                          0            3    2                1            9999 44                3     0             88888                                                              4   4  11111     4444444       66  1   2            888888888888888      3    5               3                     0  00                                    000            0     1                                   0     0000     222222222               66 6666666666666666666666666666666666666666         5                                                 0          77   77           5      0  0         8888888   000       5     11     1    6  3333333333333333333   1       6  3                              1              0         7                       1                                                             1    1 1                                 1                         1       5   1    0000    5   4444                                       1               1  66 1           
lowQualScore                  :                                                                     .   .   .      .                                                                     ................................................................................................                 .....    ..       .     ...      .                            .        .         .    ..      .   .     .     .          .  ..                          .     .         ....                          .            .    .                .            .... ..                .     .             .....                                                              .   .  .....     .......       ..  .   .            ...............      .    .               .                     .  ..                                    ...            .     .                                   .     ....     .........               .. ........................................         .                                                 .          ..   ..           .      .  .         .......   ...       .     ..     .    .  ...................   .       .  .                              .              .         .                       .                                                             .    . .                                 .                         .       .   .    ....    .   ....                                       .               .  .. .           
lowQualScore                  :                                                                     0   2   8      0                                                                     000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000                 33333    66       7     666      7                            2        0         3    11      6   6     6     5          4  55                          2     5         7777                          5            3    5                8            0000 22                1     8             33333                                                              4   4  11111     4444444       11  9   0            777777777777777      4    0               4                     2  66                                    000            7     4                                   4     7777     999999999               77 4444444444444444444444444444444444444444         7                                                 7          66   99           7      7  4         1111111   000       7     99     0    7  5555555555555555555   0       7  5                              0              2         0                       0                                                             0    0 0                                 0                         0       0   0    0000    0   5555                                       0               0  55 0           
consensus                     :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGTTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--ATTT--TC-----ATTTTTCACCA-TGTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTC---AAACA---------TGCTCCAGAAATAGT-NA--TTTT------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAAAC-CA----------T--------ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAANATGTNTNCTTTCTGGATACTACAACCAATACTTTTCAAACNTTTGTCCTTGACCCGTGCGCCACGTNCACGCATGGTANACACACANACATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
Reference ( family-217 )      :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGTTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--ATTT--T------ATTTTTCACCA-TGTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTC---AAACA---------TGCTCCAGAAATAGT-NA--TTTT------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAAAC-CA----------T--------ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAANATGTNTNCTTTCTGGATACTACAACCAATACTTTTCAAACNTTTGTCCTTGACCCGTGCGCCACGTNCACGCATGGTANACACACANACATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
gi|1                          :                                                      GTTATTTAATTTTTC-CGCCGCC-CATAAGTCTCCAACCCGGAATTTGGACCCACTGGCGCTGCCTAGCAGTGGAGACA
gi|1                          :                                                                                                                                                                                                                                                           tagtACAAGTCACGGCATTTCATG----TTTTTT-CACAA---GTCAAAGTTCACCATTTTCAACAAGTTCCACAGACCTTAATATTGGGTCTACAATTCTG--ATTTTG-GTA-CCATT-CTTTAGCGGAACATGTGTAGGTTCTGTTTTTTACAACAAATAATTTC-TAAAAATTCATTAAC----GACCCGTGCGGCACGTGCATACATGATACCTAAGCGCTA-AAATACATTTTAATTATACTATTTTTGCTGTAGCG---C--ACGGGGTTCGAACATG-CATGGGTGGCTGCTGGTAC-----TCGTTCAATTCGTACAGGGGACATCTATGCTCACTCTGGTACCCAGTTTTATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAAAATG--ATTT--TTTTTTAATTTTTCACCA-TGTTCCACGCATCCCCGGCGCCTTATTCCTGGCACTAGGGAGGTGATTTTTACATCATTCCTTAGCGATTACCAATGC---CTACAGCCCCCATAA-TCAAACACATCATATACTACGGCTATTGACCTGTCCGGCAGGCCC---AAACA---------TGGTCCAGAAATAGT-GA--TTTTTGGCTTGAA---------A---------------GTCCGAACG-TTTTTTCGGCATGGTTTGACCCGTTCCCCAGAGGTCATTAGCCCGATTTCAAACTTTAACCCGGG--TTTTCTGCAAG-GTTTATGGTCAGATAAAGC----C--ATT---GGTGTAA-GAAAAATAATGCTAAAC-CA----------T--------ACACTTAGCGA-TATAGGGTCATTTGAAATTAAGGAAAATCTGGGTTTTGGGCCATTTTCTGACCAAAAACAGCCGTTTTTCATCAATTTCAACACGCTCCAAATTCTTTATTATTTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAAAATGTATTCTTTCTGGATACTACAACCAATACTTTTCAAACCTTTGTCCTTGACCCGTGCGCCACGTGCACGCAT-GTACACAC-TAAATATGTCTAA--AAATTGTTTCTGTGACCACGGGGCTGATTTTCACTATATAATTTAACATATTTTTTATCTACACAATCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggacaacaagtcacggcatttcatgttttttcacaagtcaaagttcaccattttcaacaagttccacagaccttaatattgggtctacaattctgattttggtaccattctttagcggaacatgtgtaggttctgttttttacaacaaataatttctaaaaattcattaacgacccgtgcggcacgtgcatacatgatacctaagcgctaaaatacattttaattatactatttttgctgtagcgcacggggttcgaacatgcatgggtggctgctggtactcgttcaattcgtacaggggacatctatgctcactctggtacccagttttatgggttccgataagtattttcgaaaaaatcgcataccggcaaaaatgatttttttttaatttttcaccatgttccacgcatccccggcgccttattcctggcactagggaggtgatttttacatcattccttagcgattaccaatgcctacagcccccataatcaaacacatcatatactacggctattgacctgtccggcaggcccaaacatggtccagaaatagtgatttttggcttgaaagtccgaacgttttttcggcatggtttgacccgttccccagaggtcattagcccgatttcaaactttaacccgggttttctgcaaggtttatggtcagataaagccattggtgtaagaaaaataatgctaaaccatacacttagcgatatagggtcatttgaaattaaggaaaatctgggttttgggccattttctgaccaaaaacagccgtttttcatcaatttcaacacgctccaaattctttattatttcacataaacggctgattttggtatcattatttagagaaaaatgtattctttctggatactacaaccaatacttttcaaacctttgtccttgacccgtgcgccacgtgcacgcatgtacacactaaatatgtctaaaaattgtttctgtgaccacggggctgattttcactatataatttaacatattttttatctacacaatccacac
gi|10                         :                                                                                                                                                       tagtgttatttaatttttccgccgcccataagtctccaacccggaatttggacccactggcgctgcctagcagtggagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggaca--ATTGTT-GTA-CCATT-CTTTAGCGGAATATGTGTTAATTCATGTTTTAACCACAAATAAGTTTGCAAAG-TTCATTAAC----AACCCGTGCAATACGTGTAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGATAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATGTCGTACCCAGATTGATG
gi|11                         :                                                                                                                                                                                                                                                                                                                                                                     TTTG-GTAGCCATT-CTTTAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCAAAA-TTCATTAAC----GACCCGTGCAATACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCCAGATTGATG
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                        g-GTA-CCATT-CTTAAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCTAAA-TTCATTAAC----AACCCGTGTAATACGTGCAAACATAGTACCTAAGCACAA-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TTGTGTAATTCGTACAGGGGACATCTAGGAACAATCTCGTACCCAGATTGATG
gi|13                         :                                                                                                                                                                                                                                                                    TCACGGCTTTTCACAG--TTTTTTT-TAGAAAAAGTCAAATTTCATCATTTTCAACAAGTTCCACAAAATTCAATACATGGTCTACAGGTCTGTTATTTTT-GTA-CCATT-CTTTATCTGAACATGTATATTGTCTTGTTTTTACCACAAATAGTTTT-CAAAAAAATATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAA
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 caagtattaCCGTAGCG---C--ACATACTTCCAACATG-CACGGAT-GTTGTTGGTAAACTACTTGTTAAAATCGTACAA-------------ACACTCTGATATACAGATTAGTAGGTTCCAAT-AAG-TA-----TTTTTTGAAGAAGAAAAAAACTCTCAT--CTGCAAATATGAAATTT--C------AT
gi|15                         :                                                                                                                                                                                                                                                                                            aaaatttaacttattaagtatgtctgaatatctgaTTACACAGAC--------TTGGTCTACAGGTCTG--TTTTTTTGTA-CCATTTCTTTATCTGAACATGTTTATTGTCTTGTTTTTACCACAAATAGTTTTTAAAAAAAT-ATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAgat
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                aaactATTAGCCTGGTCTGGAACTTTAACGGTGT--TTTTCTGCAAATGCTTATGGTTAGATAAAGC----G--ATT---GATGTAA-GAAAAACAATTCGAAGCATA----------TTATATATAATAATTAGTGA-TGTAGTGTCATTTGAAATTAAGGAAAA
gi|17                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  tcaATTAGCCTGACCTGGAACTTTAACGGCGT--TTTTCTGCAAT-GCTTATGGTTAGATAAAGT----G--ATT---GGTGTAA-GAAAAACAATTCGAAAG-CATAATATATATT--------ATGATTAGTGA-TGAAGTGTCATTTGAAATTAAGGAAAAA
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   aAATTTTATTTTCACTCATTTTGCTGTAGTG---C--ATGGGGTTCGAACATA-CACGGTTGGTTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCAAGATTGATG
gi|19                         :                                                                                                                                                                                                                                                                    TCACGGCTTTTCACAGC--TTTTTT-TAGAAAAAGTCAAATTTCTTCATTTTCAAAAAGTTCCACAGACTTTA
gi|2                          :                                             caagtattaGTCATTTAATTTGTC-CGTGGCCCCTAAGG-CTCCAACGCGAAACTCGGACCCGCTGGCACCGCTTAGCGAAGAGGACATTGAACCATTTAGGCATCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAA---GTCAAAGTTCATCATTTTCAACAAGTGCCACAGACCTTAATATTAGGTCTACTATTCTG--ATTTTT-GTA-CCATT-CTTTAACGGAATATGTGAAGGTTCTTGTTTTTACCATAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCAGCACGTGCAAACAAAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTTTGCTGTAGCGAAGCGAACGGTGTTCGAACATA-CACGGTTGATTGTTGGTAG-----TCATTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCAAG-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--AT------------TTTTTCACCA-AGTTCCATGCATCCCCGACACCTTATTCCTAGCACTAAGGTAATGATTGTTATATAATTCCTTAGGGATTTTCAATGC---CTACAGTCCCCATAAATCGAACAT---ATATGCTACGGTTATTGATCTGTCCGGCAGGCTC---AAACA---------TGGTCCACAAATGGT-GA------------------------A---------------GTCCGAACGTTTTTTTCGGCATGGGTTGACCGGTTCGACAGAGGTCATTAGCCCGATCTCGAACTTGAACTCGGG--TTTTCTGCAAG-GTTTATGGTCAGATAAATC----A--ATT---GGTGTAA-GAAAACTAATTCATAAC-CA----------T--------ATACTTAGGGA-TTTAGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCAGACCAAAAA-AGCTGTTTTTTATCGATTTCAACACGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAAAAACATGTTTATTTTCTGGATATTACAACCAATACTTTTCAAACATTTGTTCTTGACCCGTGCGTCACGTTCACGCATGGTAAACACAC-CACAT-TCT-AAGAAATTGTTTCTATGACCACGGGGCTGATTTTTACTACATTATTTAACATATTTTTAATA-AAACAATCCGTAC
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAATTAAGGAAAAACTTGGTTTTTGGCCACCTTCGGACCAAAAATATCTGTTTTTCATCAATTTCAACCCGTTC
gi|21                         :                                                      GTGATTTAATTTTTC-CGTCGCCTCACAGT-GTCCAACCCGAAATTGGTACCAGCTGGCGCCGCCTAGCGGTGAGttt
gi|22                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    t------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCa
gi|3                          :                                                   ctaGTGATTTAATTTTTC-CGTTGCTTCACAGG-CTCCAACCCAAAATTCAGACCCACTGGCACTGCTTAGCTGTGAGATGATTGAACCATTTAGGCATTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAAA---TCAAAGTTCATTATTTTCAACAAGTTCCACAGACCTTAATATTAGGTCTACAATTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGAATAGATTCTTGTTTTTACCACAAATAAATTTGTAAA--CTCGTTAAA----GACCAGTGCAGCACGTGCAAACATAGTACCTAAACGCAG-AAATAAATTTTATTTTTACTCTTTTTGCTGAAG-A--GC--CTGGTGTTCAAACATG-CATGTGTGGTTGTTGGCAG-----TCATTCAATTCGTACAGTGGACATATAGGTACACTCTGATATCCAGATTGATGGGTTCCGATTAAG-TA-----TTTTC-------GAAAAAA--TCTCATACCAACAAATATG--ATTTATTCAA---ATTTTTTACCA-TGTTCCATGCATCCGGGGCACCTTATTCCTAGCGCTAATGAGATGATTGTTACATCATTTCTTAGGGATTTCCAATGA---CTACAGTCTACAGAAATCAAACATATCATATACTACAGTTATTGACCTGTCCGGTAGGCTG---AAACA---------TCCCTTAGAAATAGT-TAT-TTTT------------------AGCTAAAAACAATTATGTTCGAACG-GTTTTTTGGCATGGGTTGACCGGTTTGCCAGAGGTCATTAGCCCGATCTCGAACTTTTACTTGGG--TTTTCTACAAG-GTTTAT----AAATAAAACTATAGTCATTAAAGGTCTAATGAAAAAAAA
gi|4                          :                                                                                                                                                                                                                                                                aagtTCACGGCTTTTCACGGC-TTTTTTT-TAGAAAAAGTCAAATTCCATAATTTTCAAAAAGTTCCACAGACTTCAATATTTGGTCGACAGGTCTG--TTTTTT-GTA-CCATT-CTTTATCGGAACATTTTTATTTTCTTGTTTTTACCACAGATAGTTTT-TAAAAATATATTAAA----GACCCGTGAGACACGGACAAACATAGAACCTAAACGCAG-AAATCAATTTTATGTTCACTATTTTTACTGTAGCG---C--ACGTGCTTCAAACATG-CACATGTGGTTGTTGGTAC-----TCCTTCAATTCGTACAGGGAACATCTAGGTACACTCTGATATACAGATTGATAGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAT--TCACACACCGGCAAATATGAAATGT--TCAAG--ATTTTTCACTA-TTCGCCACGCATCTCCGGGACCACATCGGTAGCACTAGGGA-ATGAGTTTTACATCATTCATTAGAAAAACCCAATGC---CAACATCCACTATCAATCGGATATATCATATACTACGGATATTGCCCTGTCCGGCATGCTC---GAAC-----------GCTCCAGAAATAGT-AA--TTTTGACGTTTATTTGCCTCAAA---------------GTCCGAACG-TTTTTACGGCAATGTTCGACCGGCTCGCCTTAGGTCATTAGCCTGGCCGGGAACTTTAACG-GTGTTTTTTCTGCAAT-GCTTATCGTTAGATAAAGC----G--ATT---GATGTAA--AAAAACAATTCGAAAG-CATATTATATATT--------ATAATTAGTGA-AGTAGGGTCATTTGAAATTAAGGAAAAAaaac
gi|5                          :                                             caagtattaGTGATTTAATTTTTTTCGCGACCTCACAGG-CTCCAACCCGAAACTCGGACCCACTGTCGCCGCCTAGCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCGCTGC-----ACGGCATTTTTTTTCCGAAA---TCAAAGTTCATCATTTTCAACAAGTTCCACATACCTTAATATTGGGTCTACAATTCTG--ACTTTT-GTA-CCATT-CTTTAGCGGAACATGTACAGGTTCTTGTTTTTACCACAAATAATTTTGC-CGAATTCATTAACGGGTGACCCGTTCAGCACGTGCAAACATAGTACCTTAGCGCAGAAAATAAATTTTA-----ATTGTTTTTGCTGTGGC---AC--AC-GAGTTCGAACATGCCAC-GGTGGTTGTTGGTaacactacgtacaa
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           agaGGTTGATGGGTTCCGAT-AAG-TA-----ATTTC-------GAAAAAA--T---------------ATG--ATTT--TTTCAAAATTTTT-ACCA-TGTTCCACGCATCCC-GGCACATTATTCCTAGCATTAGGGAAGTGATTTT-ACATCATTCTTTAGGAATTTCCAATGC---CTACAGTCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTG---------------AAACA---------TGCTCCAGAAATATTCAA--TTTT------------------T---------------GCTCAAAtgatgggttccgataagtaatttcgaaaaaatatgattttttcaaaatttttaccatgttccacgcatcccggcacattattcctagcattagggaagtgattttacatcattctttaggaatttccaatgcctacagtccccagaaatcaaacatatcatatactacggttattgacctgaaacatgctccagaaatattcaatttttgctcaaag
gi|6                          : agagtgatttaatttttttcgcgacctcacaggctccaacccgaaactcggacccactgtcgccgcctagcggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctctacaagtcgctgcacggcattttttttccgaaatcaaagttcatcattttcaacaagttccacataccttaatattgggtctacaattctgacttttgtaccattctttagcggaacatgtacaggttcttgtttttaccacaaataattttgccgaattcattaacgggtgacccgttcagcacgtgcaaacatagtaccttagcgcagaaaataaattttaattgtttttgctgtggcacacgagttcgaacatgccacggtggttgttGCAT-AAAT-AATTTTATTTTCACTCTTTTTTCTGTAGTG---C--ACGGGGTTCGAACATG-CATGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGTCATCTAGGTTTACTCTGATACCCAGATTGATGGGTTCCGAT-AAGATT-----TTTTT-------G-AAAAA--TCGCATACCGACAAATATG--ATT-----------TTTTTCAAAATTGTT--AC-CATGCCTGGCAGCTTATTCCTAGCACTGTGGAGGTGATATTTATATCATTCCTTAGGGATTTCTAATGA---ATACAGCCCCCAGAAATCAAACATATCATATAGTAC-GTTATTGACCTGTCCGATAGGCTCAAGAAACATTCATTTTTTGCT-CAAAAACGAC-TA------------------------A---------------GTCCGAACG-TTTTTTCGGCACGGGTTGACCg
gi|7                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             tttggttAATTTTATTTTCACTCTTTTTGCTGTAGCG---C--ACGAGGTTCGAACAAG-CATGGGTGGTTGTTGGTAG-----TCGTTCAACTCGTACAGGGGACATCTAGGTACACTCTGATACCCAGATTGATGGCTTCCGAT-AAG-TATTTTTTTTTT-------TAAAAAA--TCGCATACCGGCAAATATG--ATTT--TTTCAA-AATTTTGACCA-TGTTCCACGCATCCCTGACACCTTATTCCTAGTACTATGGAGGTGATATTTACACCATTCCTTAGGGATTTCTAATGCCTACTACAGCCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTGTCCGGTAGGCTG---AAACA---------TACTCAAGAAATATT-CATTTTTT------------------G---------------CTCCGAACG-TTTTTTCAGTATGGGTTGACC
gi|8                          :                                                                                                                                                                                                                                                                                                                                                              tTG--TTTCTT-GTA-CCATT-TTTTATCGGAACATGTATATTTTCTTGATTTTACCACAAATAGTTTTTTAAAAAAATAATAAG----GACCCGTGCGACAAAGCCAAACATAGAACCTAAACGCAG-AAATCAATTTTATTTTCACTCTTTTTACTGTAGC---GT--AAGTGCTTCAAACATG-CACATGCGGTTGTTGGTAC-----TCCTTCAACTCGTACAGGGAACATCTAGGTGCACTATGATATACAGATTGAT------------AG-TA-----TTTTC-------GAAATAA--TCACACTCCGGCAAATATGAAATGT--TCAAG--ATTTTTTACCA-TGTGCCACGCATTTCCGGGACCTTATCGGTAGCACTAGGG-GATGAT
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGTTTCGACAGATGTCATTAGCCCGATCTCGAACATAAACTCGGG--TTTTCTGCAAG-GTTTATGGTCTGATAAAGC----A--ATT---GGAGTAA-GAAAA-TAATTCTTAAC-CA----------T--------ATACTTAGTGAATA-AGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAATCCGTGACCAAATCTTTATTAATTCACATAAACGGTTTAATTTGGTATCATTATT





Alignments
lowQualScore                  :                                                                                                                                                          999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999                 22222    11             222                                                                                                                                                                                                                           2222                                                                                                                 11111     1111111                            11       555555555                                                                                         111                                                               111    222222222                 9999999999999999999999999999999999999999                                                                                                            1111111   111                            7777777777777777777                                                                                                                                                                                                                                       1        3333    1   2222                                                          11             
lowQualScore                  :                                                                     8   3   3      8                                                                     666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666                 00000    22       5     111      0                            2        1         1    66      3   3     3     0          0  11                          8     6         7777                          0            3    2                1            9999 44                3     0             88888                                                              4   4  11111     4444444       66  1   2            66  1 66 333333333     3     5              3                     0  00                                    000            0     1                                   0     0  000    222222222    3         66 6666666666666666666666666666666666666666         5                                                 0          77   77           5      0  0         8888888   000       5     11     1    6  3333333333333333333   1       6  3                              1              0         7                       1                                                             1    1 1                                 1                         1       5   1    0000    5   4444                                       1               1  66 1           
lowQualScore                  :                                                                     .   .   .      .                                                                     ................................................................................................                 .....    ..       .     ...      .                            .        .         .    ..      .   .     .     .          .  ..                          .     .         ....                          .            .    .                .            .... ..                .     .             .....                                                              .   .  .....     .......       ..  .   .            ..  . .. .........     .     .              .                     .  ..                                    ...            .     .                                   .     .  ...    .........    .         .. ........................................         .                                                 .          ..   ..           .      .  .         .......   ...       .     ..     .    .  ...................   .       .  .                              .              .         .                       .                                                             .    . .                                 .                         .       .   .    ....    .   ....                                       .               .  .. .           
lowQualScore                  :                                                                     0   2   8      0                                                                     000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000                 33333    66       7     666      7                            2        0         3    11      6   6     6     5          4  55                          2     5         7777                          5            3    5                8            0000 22                1     8             33333                                                              4   4  11111     4444444       11  9   0            77  8 11 333333333     4     0              4                     2  66                                    000            7     4                                   4     7  000    999999999    0         77 4444444444444444444444444444444444444444         7                                                 7          66   99           7      7  4         1111111   000       7     99     0    7  5555555555555555555   0       7  5                              0              2         0                       0                                                             0    0 0                                 0                         0       0   0    0000    0   5555                                       0               0  55 0           
consensus                     :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGTTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--ATTT--TC-----A--TTTTTCACCAT-GTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTCAA---ACAT---------GCTCCAGAAATAGT-NA--TTTT------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAAAC-CA----------T--------ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAANATGTNTNCTTTCTGGATACTACAACCAATACTTTTCAAACNTTTGTCCTTGACCCGTGCGCCACGTNCACGCATGGTANACACACANACATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
Reference ( family-217 )      :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGTTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--ATTT--TC-----A--TTTTTCACCAT-GTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTCAA---ACAT---------GCTCCAGAAATAGT-NA--TTTT------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAAAC-CA----------T--------ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAANATGTNTNCTTTCTGGATACTACAACCAATACTTTTCAAACNTTTGTCCTTGACCCGTGCGCCACGTNCACGCATGGTANACACACANACATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
gi|1                          :                                                      GTTATTTAATTTTTC-CGCCGCC-CATAAGTCTCCAACCCGGAATTTGGACCCACTGGCGCTGCCTAGCAGTGGAGACA
gi|1                          :                                                                                                                                                                                                                                                           tagtACAAGTCACGGCATTTCATG----TTTTTT-CACAA---GTCAAAGTTCACCATTTTCAACAAGTTCCACAGACCTTAATATTGGGTCTACAATTCTG--ATTTTG-GTA-CCATT-CTTTAGCGGAACATGTGTAGGTTCTGTTTTTTACAACAAATAATTTC-TAAAAATTCATTAAC----GACCCGTGCGGCACGTGCATACATGATACCTAAGCGCTA-AAATACATTTTAATTATACTATTTTTGCTGTAGCG---C--ACGGGGTTCGAACATG-CATGGGTGGCTGCTGGTAC-----TCGTTCAATTCGTACAGGGGACATCTATGCTCACTCTGGTACCCAGTTTTATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAAAATG--ATTT--TTTTTTAA--TTTTTCACCAT-GTTCCACGCATCCCCGGCGCCTTATTCCTGGCACTAGGGAGGTGATTTTTACATCATTCCTTAGCGATTACCAATGC---CTACAGCCCCCATAA-TCAAACACATCATATACTACGGCTATTGACCTGTCCGGCAGGCCCAA---ACAT---------GGTCCAGAAATAGT-GA--TTTTTGGCTTGAA---------A---------------GTCCGAACG-TTTTTTCGGCATGGTTTGACCCGTTCCCCAGAGGTCATTAGCCCGATTTCAAACTTTAACCCGGG--TTTTCTGCAAG-GTTTATGGTCAGATAAAGC----C--ATT---GGTGTAA-GAAAAATAATGCTAAAC-CA----------T--------ACACTTAGCGA-TATAGGGTCATTTGAAATTAAGGAAAATCTGGGTTTTGGGCCATTTTCTGACCAAAAACAGCCGTTTTTCATCAATTTCAACACGCTCCAAATTCTTTATTATTTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAAAATGTATTCTTTCTGGATACTACAACCAATACTTTTCAAACCTTTGTCCTTGACCCGTGCGCCACGTGCACGCAT-GTACACAC-TAAATATGTCTAA--AAATTGTTTCTGTGACCACGGGGCTGATTTTCACTATATAATTTAACATATTTTTTATCTACACAATCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggacaacaagtcacggcatttcatgttttttcacaagtcaaagttcaccattttcaacaagttccacagaccttaatattgggtctacaattctgattttggtaccattctttagcggaacatgtgtaggttctgttttttacaacaaataatttctaaaaattcattaacgacccgtgcggcacgtgcatacatgatacctaagcgctaaaatacattttaattatactatttttgctgtagcgcacggggttcgaacatgcatgggtggctgctggtactcgttcaattcgtacaggggacatctatgctcactctggtacccagttttatgggttccgataagtattttcgaaaaaatcgcataccggcaaaaatgatttttttttaatttttcaccatgttccacgcatccccggcgccttattcctggcactagggaggtgatttttacatcattccttagcgattaccaatgcctacagcccccataatcaaacacatcatatactacggctattgacctgtccggcaggcccaaacatggtccagaaatagtgatttttggcttgaaagtccgaacgttttttcggcatggtttgacccgttccccagaggtcattagcccgatttcaaactttaacccgggttttctgcaaggtttatggtcagataaagccattggtgtaagaaaaataatgctaaaccatacacttagcgatatagggtcatttgaaattaaggaaaatctgggttttgggccattttctgaccaaaaacagccgtttttcatcaatttcaacacgctccaaattctttattatttcacataaacggctgattttggtatcattatttagagaaaaatgtattctttctggatactacaaccaatacttttcaaacctttgtccttgacccgtgcgccacgtgcacgcatgtacacactaaatatgtctaaaaattgtttctgtgaccacggggctgattttcactatataatttaacatattttttatctacacaatccacac
gi|10                         :                                                                                                                                                       tagtgttatttaatttttccgccgcccataagtctccaacccggaatttggacccactggcgctgcctagcagtggagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggaca--ATTGTT-GTA-CCATT-CTTTAGCGGAATATGTGTTAATTCATGTTTTAACCACAAATAAGTTTGCAAAG-TTCATTAAC----AACCCGTGCAATACGTGTAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGATAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATGTCGTACCCAGATTGATG
gi|11                         :                                                                                                                                                                                                                                                                                                                                                                     TTTG-GTAGCCATT-CTTTAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCAAAA-TTCATTAAC----GACCCGTGCAATACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCCAGATTGATG
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                        g-GTA-CCATT-CTTAAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCTAAA-TTCATTAAC----AACCCGTGTAATACGTGCAAACATAGTACCTAAGCACAA-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TTGTGTAATTCGTACAGGGGACATCTAGGAACAATCTCGTACCCAGATTGATG
gi|13                         :                                                                                                                                                                                                                                                                    TCACGGCTTTTCACAG--TTTTTTT-TAGAAAAAGTCAAATTTCATCATTTTCAACAAGTTCCACAAAATTCAATACATGGTCTACAGGTCTGTTATTTTT-GTA-CCATT-CTTTATCTGAACATGTATATTGTCTTGTTTTTACCACAAATAGTTTT-CAAAAAAATATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAA
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 caagtattaCCGTAGCG---C--ACATACTTCCAACATG-CACGGAT-GTTGTTGGTAAACTACTTGTTAAAATCGTACAA-------------ACACTCTGATATACAGATTAGTAGGTTCCAAT-AAG-TA-----TTTTTTGAAGAAGAAAAAAACTCTCAT--CTGCAAATATGA-AATT--TC-----A--T
gi|15                         :                                                                                                                                                                                                                                                                                            aaaatttaacttattaagtatgtctgaatatctgaTTACACAGAC--------TTGGTCTACAGGTCTG--TTTTTTTGTA-CCATTTCTTTATCTGAACATGTTTATTGTCTTGTTTTTACCACAAATAGTTTTTAAAAAAAT-ATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAgat
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  aaactATTAGCCTGGTCTGGAACTTTAACGGTGT--TTTTCTGCAAATGCTTATGGTTAGATAAAGC----G--ATT---GATGTAA-GAAAAACAATTCGAAGCATA----------TTATATATAATAATTAGTGA-TGTAGTGTCATTTGAAATTAAGGAAAA
gi|17                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    tcaATTAGCCTGACCTGGAACTTTAACGGCGT--TTTTCTGCAAT-GCTTATGGTTAGATAAAGT----G--ATT---GGTGTAA-GAAAAACAATTCGAAAG-CATAATATATATT--------ATGATTAGTGA-TGAAGTGTCATTTGAAATTAAGGAAAAA
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   aAATTTTATTTTCACTCATTTTGCTGTAGTG---C--ATGGGGTTCGAACATA-CACGGTTGGTTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCAAGATTGATG
gi|19                         :                                                                                                                                                                                                                                                                    TCACGGCTTTTCACAGC--TTTTTT-TAGAAAAAGTCAAATTTCTTCATTTTCAAAAAGTTCCACAGACTTTA
gi|2                          :                                             caagtattaGTCATTTAATTTGTC-CGTGGCCCCTAAGG-CTCCAACGCGAAACTCGGACCCGCTGGCACCGCTTAGCGAAGAGGACATTGAACCATTTAGGCATCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAA---GTCAAAGTTCATCATTTTCAACAAGTGCCACAGACCTTAATATTAGGTCTACTATTCTG--ATTTTT-GTA-CCATT-CTTTAACGGAATATGTGAAGGTTCTTGTTTTTACCATAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCAGCACGTGCAAACAAAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTTTGCTGTAGCGAAGCGAACGGTGTTCGAACATA-CACGGTTGATTGTTGGTAG-----TCATTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCAAG-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--AT--------------TTTTTCACCAA-GTTCCATGCATCCCCGACACCTTATTCCTAGCACTAAGGTAATGATTGTTATATAATTCCTTAGGGATTTTCAATGC---CTACAGTCCCCATAAATCGAACAT---ATATGCTACGGTTATTGATCTGTCCGGCAGGCTCAA---ACAT---------GGTCCACAAATGGT-GA------------------------A---------------GTCCGAACGTTTTTTTCGGCATGGGTTGACCGGTTCGACAGAGGTCATTAGCCCGATCTCGAACTTGAACTCGGG--TTTTCTGCAAG-GTTTATGGTCAGATAAATC----A--ATT---GGTGTAA-GAAAACTAATTCATAAC-CA----------T--------ATACTTAGGGA-TTTAGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCAGACCAAAAA-AGCTGTTTTTTATCGATTTCAACACGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAAAAACATGTTTATTTTCTGGATATTACAACCAATACTTTTCAAACATTTGTTCTTGACCCGTGCGTCACGTTCACGCATGGTAAACACAC-CACAT-TCT-AAGAAATTGTTTCTATGACCACGGGGCTGATTTTTACTACATTATTTAACATATTTTTAATA-AAACAATCCGTAC
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAATTAAGGAAAAACTTGGTTTTTGGCCACCTTCGGACCAAAAATATCTGTTTTTCATCAATTTCAACCCGTTC
gi|21                         :                                                      GTGATTTAATTTTTC-CGTCGCCTCACAGT-GTCCAACCCGAAATTGGTACCAGCTGGCGCCGCCTAGCGGTGAGttt
gi|22                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      t------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCa
gi|3                          :                                                   ctaGTGATTTAATTTTTC-CGTTGCTTCACAGG-CTCCAACCCAAAATTCAGACCCACTGGCACTGCTTAGCTGTGAGATGATTGAACCATTTAGGCATTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAAA---TCAAAGTTCATTATTTTCAACAAGTTCCACAGACCTTAATATTAGGTCTACAATTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGAATAGATTCTTGTTTTTACCACAAATAAATTTGTAAA--CTCGTTAAA----GACCAGTGCAGCACGTGCAAACATAGTACCTAAACGCAG-AAATAAATTTTATTTTTACTCTTTTTGCTGAAG-A--GC--CTGGTGTTCAAACATG-CATGTGTGGTTGTTGGCAG-----TCATTCAATTCGTACAGTGGACATATAGGTACACTCTGATATCCAGATTGATGGGTTCCGATTAAG-TA-----TTTTC-------GAAAAAA--TCTCATACCAACAAATATG--ATTTATTC-----AAATTTTTTACCAT-GTTCCATGCATCCGGGGCACCTTATTCCTAGCGCTAATGAGATGATTGTTACATCATTTCTTAGGGATTTCCAATGA---CTACAGTCTACAGAAATCAAACATATCATATACTACAGTTATTGACCTGTCCGGTAGGCTGAA---ACAT---------CCCTTAGAAATAGT-TAT-TTTT------------------AGCTAAAAACAATTATGTTCGAACG-GTTTTTTGGCATGGGTTGACCGGTTTGCCAGAGGTCATTAGCCCGATCTCGAACTTTTACTTGGG--TTTTCTACAAG-GTTTAT----AAATAAAACTATAGTCATTAAAGGTCTAATGAAAAAAAA
gi|4                          :                                                                                                                                                                                                                                                                aagtTCACGGCTTTTCACGGC-TTTTTTT-TAGAAAAAGTCAAATTCCATAATTTTCAAAAAGTTCCACAGACTTCAATATTTGGTCGACAGGTCTG--TTTTTT-GTA-CCATT-CTTTATCGGAACATTTTTATTTTCTTGTTTTTACCACAGATAGTTTT-TAAAAATATATTAAA----GACCCGTGAGACACGGACAAACATAGAACCTAAACGCAG-AAATCAATTTTATGTTCACTATTTTTACTGTAGCG---C--ACGTGCTTCAAACATG-CACATGTGGTTGTTGGTAC-----TCCTTCAATTCGTACAGGGAACATCTAGGTACACTCTGATATACAGATTGATAGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAT--TCACACACCGGCAAATATGAAATGT--TCAAG--A--TTTTTCACTAT-TCGCCACGCATCTCCGGGACCACATCGGTAGCACTAGGGA-ATGAGTTTTACATCATTCATTAGAAAAACCCAATGC---CAACATCCACTATCAATCGGATATATCATATACTACGGATATTGCCCTGTCCGGCATGCTCGA---AC-----------GCTCCAGAAATAGT-AA--TTTTGACGTTTATTTGCCTCAAA---------------GTCCGAACG-TTTTTACGGCAATGTTCGACCGGCTCGCCTTAGGTCATTAGCCTGGCCGGGAACTTTAACG-GTGTTTTTTCTGCAAT-GCTTATCGTTAGATAAAGC----G--ATT---GATGTAA--AAAAACAATTCGAAAG-CATATTATATATT--------ATAATTAGTGA-AGTAGGGTCATTTGAAATTAAGGAAAAAaaac
gi|5                          :                                             caagtattaGTGATTTAATTTTTTTCGCGACCTCACAGG-CTCCAACCCGAAACTCGGACCCACTGTCGCCGCCTAGCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCGCTGC-----ACGGCATTTTTTTTCCGAAA---TCAAAGTTCATCATTTTCAACAAGTTCCACATACCTTAATATTGGGTCTACAATTCTG--ACTTTT-GTA-CCATT-CTTTAGCGGAACATGTACAGGTTCTTGTTTTTACCACAAATAATTTTGC-CGAATTCATTAACGGGTGACCCGTTCAGCACGTGCAAACATAGTACCTTAGCGCAGAAAATAAATTTTA-----ATTGTTTTTGCTGTGGC---AC--AC-GAGTTCGAACATGCCAC-GGTGGTTGTTGGTaacactacgtacaa
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           agaGGTTGATGGGTTCCGAT-AAG-TA-----ATTTC-------GAAAAAA--T---------------ATG--ATTT--TTTCAAAA--TTTTT-ACCAT-GTTCCACGCATCCC-GGCACATTATTCCTAGCATTAGGGAAGTGATTTT-ACATCATTCTTTAGGAATTTCCAATGC---CTACAGTCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTG------------AA---ACAT---------GCTCCAGAAATATTCAA--TTTT------------------T---------------GCTCAAAtgatgggttccgataagtaatttcgaaaaaatatgattttttcaaaatttttaccatgttccacgcatcccggcacattattcctagcattagggaagtgattttacatcattctttaggaatttccaatgcctacagtccccagaaatcaaacatatcatatactacggttattgacctgaaacatgctccagaaatattcaatttttgctcaaag
gi|6                          : agagtgatttaatttttttcgcgacctcacaggctccaacccgaaactcggacccactgtcgccgcctagcggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctctacaagtcgctgcacggcattttttttccgaaatcaaagttcatcattttcaacaagttccacataccttaatattgggtctacaattctgacttttgtaccattctttagcggaacatgtacaggttcttgtttttaccacaaataattttgccgaattcattaacgggtgacccgttcagcacgtgcaaacatagtaccttagcgcagaaaataaattttaattgtttttgctgtggcacacgagttcgaacatgccacggtggttgttGCAT-AAAT-AATTTTATTTTCACTCTTTTTTCTGTAGTG---C--ACGGGGTTCGAACATG-CATGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGTCATCTAGGTTTACTCTGATACCCAGATTGATGGGTTCCGAT-AAGATT-----TTTTT-------GAAAAA---TCGCATACCGACAAATATG--ATTT--T-----------TTTCAAAATTGTT--AC-CATGCCTGGCAGCTTATTCCTAGCACTGTGGAGGTGATATTTATATCATTCCTTAGGGATTTCTAATGA---ATACAGCCCCCAGAAATCAAACATATCATATAGTACG-TTATTGACCTGTCCGATAGGCTCAAGAAACATTCATTTTTTGCTC-AAAAACGAC-TA------------------------A---------------GTCCGAACG-TTTTTTCGGCACGGGTTGACCg
gi|7                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             tttggttAATTTTATTTTCACTCTTTTTGCTGTAGCG---C--ACGAGGTTCGAACAAG-CATGGGTGGTTGTTGGTAG-----TCGTTCAACTCGTACAGGGGACATCTAGGTACACTCTGATACCCAGATTGATGGCTTCCGAT-AAG-TATTTTTTTTTT-------TAAAAAA--TCGCATACCGGCAAATATG--ATTT--TTTCAA-A--ATTTTGACCAT-GTTCCACGCATCCCTGACACCTTATTCCTAGTACTATGGAGGTGATATTTACACCATTCCTTAGGGATTTCTAATGCCTACTACAGCCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTGTCCGGTAGGCTGAA---ACAT---------ACTCAAGAAATATT-CATTTTTT------------------G---------------CTCCGAACG-TTTTTTCAGTATGGGTTGACC
gi|8                          :                                                                                                                                                                                                                                                                                                                                                              tTG--TTTCTT-GTA-CCATT-TTTTATCGGAACATGTATATTTTCTTGATTTTACCACAAATAGTTTTTTAAAAAAATAATAAG----GACCCGTGCGACAAAGCCAAACATAGAACCTAAACGCAG-AAATCAATTTTATTTTCACTCTTTTTACTGTAGC---GT--AAGTGCTTCAAACATG-CACATGCGGTTGTTGGTAC-----TCCTTCAACTCGTACAGGGAACATCTAGGTGCACTATGATATACAGATTGAT------------AG-TA-----TTTTC-------GAAATAA--TCACACTCCGGCAAATATGAAATGT--TCAAG--A--TTTTTTACCAT-GTGCCACGCATTTCCGGGACCTTATCGGTAGCACTAGGG-GATGAT
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGTTTCGACAGATGTCATTAGCCCGATCTCGAACATAAACTCGGG--TTTTCTGCAAG-GTTTATGGTCTGATAAAGC----A--ATT---GGAGTAA-GAAAA-TAATTCTTAAC-CA----------T--------ATACTTAGTGAATA-AGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAATCCGTGACCAAATCTTTATTAATTCACATAAACGGTTTAATTTGGTATCATTATT





Alignments
lowQualScore                  :                                                                                                                                                          999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999                 22222    11             222                                                                                                                                                                                                                           2222                                                                                                                 11111     1111111                            11       555555555                                                                                         111                                                               111    222222222                 9999999999999999999999999999999999999999                                                                                                            1111111   111                            7777777777777777777                                                                                                                                                                                                                                       1        3333    1   2222                                                          11             
lowQualScore                  :                                                                     8   3   3      8                                                                     666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666                 00000    22       5     111      0                            2        1         1    66      3   3     3     0          0  11                          8     6         7777                          0            3    2                1            9999 44                3     0             88888                                                              4   4  11111     4444444       66  1   2            66  1 66 333333333     3     5              3                     0  00                                    000            0     1                                   0     0  000    222222222    3         66 6666666666666666666666666666666666666666         5                                                 0          77   77           5      0  0         8888888   000       5     11     1    6  3333333333333333333   1       6  3                              1              0         7                       1                                                             1    1 1                                 1                         1       5   1    0000    5   4444                                       1               1  66 1           
lowQualScore                  :                                                                     .   .   .      .                                                                     ................................................................................................                 .....    ..       .     ...      .                            .        .         .    ..      .   .     .     .          .  ..                          .     .         ....                          .            .    .                .            .... ..                .     .             .....                                                              .   .  .....     .......       ..  .   .            ..  . .. .........     .     .              .                     .  ..                                    ...            .     .                                   .     .  ...    .........    .         .. ........................................         .                                                 .          ..   ..           .      .  .         .......   ...       .     ..     .    .  ...................   .       .  .                              .              .         .                       .                                                             .    . .                                 .                         .       .   .    ....    .   ....                                       .               .  .. .           
lowQualScore                  :                                                                     0   2   8      0                                                                     000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000                 33333    66       7     666      7                            2        0         3    11      6   6     6     5          4  55                          2     5         7777                          5            3    5                8            0000 22                1     8             33333                                                              4   4  11111     4444444       11  9   0            77  8 11 333333333     4     0              4                     2  66                                    000            7     4                                   4     7  000    999999999    0         77 4444444444444444444444444444444444444444         7                                                 7          66   99           7      7  4         1111111   000       7     99     0    7  5555555555555555555   0       7  5                              0              2         0                       0                                                             0    0 0                                 0                         0       0   0    0000    0   5555                                       0               0  55 0           
consensus                     :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGTTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--ATTT--TC-----A--TTTTTCACCAT-GTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTCAA---ACAT---------GCTCCAGAAATAGT-NA--TTTT------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAAAC-CA----------T--------ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAANATGTNTNCTTTCTGGATACTACAACCAATACTTTTCAAACNTTTGTCCTTGACCCGTGCGCCACGTNCACGCATGGTANACACACANACATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
Reference ( family-217 )      :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGTTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--ATTT--TC-----A--TTTTTCACCAT-GTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTCAA---ACAT---------GCTCCAGAAATAGT-NA--TTTT------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAAAC-CA----------T--------ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAANATGTNTNCTTTCTGGATACTACAACCAATACTTTTCAAACNTTTGTCCTTGACCCGTGCGCCACGTNCACGCATGGTANACACACANACATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
gi|1                          :                                                      GTTATTTAATTTTTC-CGCCGCC-CATAAGTCTCCAACCCGGAATTTGGACCCACTGGCGCTGCCTAGCAGTGGAGACA
gi|1                          :                                                                                                                                                                                                                                                           tagtACAAGTCACGGCATTTCATG----TTTTTT-CACAA---GTCAAAGTTCACCATTTTCAACAAGTTCCACAGACCTTAATATTGGGTCTACAATTCTG--ATTTTG-GTA-CCATT-CTTTAGCGGAACATGTGTAGGTTCTGTTTTTTACAACAAATAATTTC-TAAAAATTCATTAAC----GACCCGTGCGGCACGTGCATACATGATACCTAAGCGCTA-AAATACATTTTAATTATACTATTTTTGCTGTAGCG---C--ACGGGGTTCGAACATG-CATGGGTGGCTGCTGGTAC-----TCGTTCAATTCGTACAGGGGACATCTATGCTCACTCTGGTACCCAGTTTTATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAAAATG--ATTT--TTTTTTAA--TTTTTCACCAT-GTTCCACGCATCCCCGGCGCCTTATTCCTGGCACTAGGGAGGTGATTTTTACATCATTCCTTAGCGATTACCAATGC---CTACAGCCCCCATAA-TCAAACACATCATATACTACGGCTATTGACCTGTCCGGCAGGCCCAA---ACAT---------GGTCCAGAAATAGT-GA--TTTTTGGCTTGAA---------A---------------GTCCGAACG-TTTTTTCGGCATGGTTTGACCCGTTCCCCAGAGGTCATTAGCCCGATTTCAAACTTTAACCCGGG--TTTTCTGCAAG-GTTTATGGTCAGATAAAGC----C--ATT---GGTGTAA-GAAAAATAATGCTAAAC-CA----------T--------ACACTTAGCGA-TATAGGGTCATTTGAAATTAAGGAAAATCTGGGTTTTGGGCCATTTTCTGACCAAAAACAGCCGTTTTTCATCAATTTCAACACGCTCCAAATTCTTTATTATTTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAAAATGTATTCTTTCTGGATACTACAACCAATACTTTTCAAACCTTTGTCCTTGACCCGTGCGCCACGTGCACGCAT-GTACACAC-TAAATATGTCTAA--AAATTGTTTCTGTGACCACGGGGCTGATTTTCACTATATAATTTAACATATTTTTTATCTACACAATCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggacaacaagtcacggcatttcatgttttttcacaagtcaaagttcaccattttcaacaagttccacagaccttaatattgggtctacaattctgattttggtaccattctttagcggaacatgtgtaggttctgttttttacaacaaataatttctaaaaattcattaacgacccgtgcggcacgtgcatacatgatacctaagcgctaaaatacattttaattatactatttttgctgtagcgcacggggttcgaacatgcatgggtggctgctggtactcgttcaattcgtacaggggacatctatgctcactctggtacccagttttatgggttccgataagtattttcgaaaaaatcgcataccggcaaaaatgatttttttttaatttttcaccatgttccacgcatccccggcgccttattcctggcactagggaggtgatttttacatcattccttagcgattaccaatgcctacagcccccataatcaaacacatcatatactacggctattgacctgtccggcaggcccaaacatggtccagaaatagtgatttttggcttgaaagtccgaacgttttttcggcatggtttgacccgttccccagaggtcattagcccgatttcaaactttaacccgggttttctgcaaggtttatggtcagataaagccattggtgtaagaaaaataatgctaaaccatacacttagcgatatagggtcatttgaaattaaggaaaatctgggttttgggccattttctgaccaaaaacagccgtttttcatcaatttcaacacgctccaaattctttattatttcacataaacggctgattttggtatcattatttagagaaaaatgtattctttctggatactacaaccaatacttttcaaacctttgtccttgacccgtgcgccacgtgcacgcatgtacacactaaatatgtctaaaaattgtttctgtgaccacggggctgattttcactatataatttaacatattttttatctacacaatccacac
gi|10                         :                                                                                                                                                       tagtgttatttaatttttccgccgcccataagtctccaacccggaatttggacccactggcgctgcctagcagtggagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggaca--ATTGTT-GTA-CCATT-CTTTAGCGGAATATGTGTTAATTCATGTTTTAACCACAAATAAGTTTGCAAAG-TTCATTAAC----AACCCGTGCAATACGTGTAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGATAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATGTCGTACCCAGATTGATG
gi|11                         :                                                                                                                                                                                                                                                                                                                                                                     TTTG-GTAGCCATT-CTTTAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCAAAA-TTCATTAAC----GACCCGTGCAATACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCCAGATTGATG
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                        g-GTA-CCATT-CTTAAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCTAAA-TTCATTAAC----AACCCGTGTAATACGTGCAAACATAGTACCTAAGCACAA-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TTGTGTAATTCGTACAGGGGACATCTAGGAACAATCTCGTACCCAGATTGATG
gi|13                         :                                                                                                                                                                                                                                                                    TCACGGCTTTTCACAG--TTTTTTT-TAGAAAAAGTCAAATTTCATCATTTTCAACAAGTTCCACAAAATTCAATACATGGTCTACAGGTCTGTTATTTTT-GTA-CCATT-CTTTATCTGAACATGTATATTGTCTTGTTTTTACCACAAATAGTTTT-CAAAAAAATATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAA
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 caagtattaCCGTAGCG---C--ACATACTTCCAACATG-CACGGAT-GTTGTTGGTAAACTACTTGTTAAAATCGTACAA-------------ACACTCTGATATACAGATTAGTAGGTTCCAAT-AAG-TA-----TTTTTTGAAGAAGAAAAAAACTCTCAT--CTGCAAATATGA-AATT--TC-----A--T
gi|15                         :                                                                                                                                                                                                                                                                                            aaaatttaacttattaagtatgtctgaatatctgaTTACACAGAC--------TTGGTCTACAGGTCTG--TTTTTTTGTA-CCATTTCTTTATCTGAACATGTTTATTGTCTTGTTTTTACCACAAATAGTTTTTAAAAAAAT-ATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAgat
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  aaactATTAGCCTGGTCTGGAACTTTAACGGTGT--TTTTCTGCAAATGCTTATGGTTAGATAAAGC----G--ATT---GATGTAA-GAAAAACAATTCGAAGCATA----------TTATATATAATAATTAGTGA-TGTAGTGTCATTTGAAATTAAGGAAAA
gi|17                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    tcaATTAGCCTGACCTGGAACTTTAACGGCGT--TTTTCTGCAAT-GCTTATGGTTAGATAAAGT----G--ATT---GGTGTAA-GAAAAACAATTCGAAAG-CATAATATATATT--------ATGATTAGTGA-TGAAGTGTCATTTGAAATTAAGGAAAAA
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   aAATTTTATTTTCACTCATTTTGCTGTAGTG---C--ATGGGGTTCGAACATA-CACGGTTGGTTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCAAGATTGATG
gi|19                         :                                                                                                                                                                                                                                                                    TCACGGCTTTTCACAGC--TTTTTT-TAGAAAAAGTCAAATTTCTTCATTTTCAAAAAGTTCCACAGACTTTA
gi|2                          :                                             caagtattaGTCATTTAATTTGTC-CGTGGCCCCTAAGG-CTCCAACGCGAAACTCGGACCCGCTGGCACCGCTTAGCGAAGAGGACATTGAACCATTTAGGCATCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAA---GTCAAAGTTCATCATTTTCAACAAGTGCCACAGACCTTAATATTAGGTCTACTATTCTG--ATTTTT-GTA-CCATT-CTTTAACGGAATATGTGAAGGTTCTTGTTTTTACCATAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCAGCACGTGCAAACAAAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTTTGCTGTAGCGAAGCGAACGGTGTTCGAACATA-CACGGTTGATTGTTGGTAG-----TCATTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCAAG-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--AT--------------TTTTTCACCAA-GTTCCATGCATCCCCGACACCTTATTCCTAGCACTAAGGTAATGATTGTTATATAATTCCTTAGGGATTTTCAATGC---CTACAGTCCCCATAAATCGAACAT---ATATGCTACGGTTATTGATCTGTCCGGCAGGCTCAA---ACAT---------GGTCCACAAATGGT-GA------------------------A---------------GTCCGAACGTTTTTTTCGGCATGGGTTGACCGGTTCGACAGAGGTCATTAGCCCGATCTCGAACTTGAACTCGGG--TTTTCTGCAAG-GTTTATGGTCAGATAAATC----A--ATT---GGTGTAA-GAAAACTAATTCATAAC-CA----------T--------ATACTTAGGGA-TTTAGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCAGACCAAAAA-AGCTGTTTTTTATCGATTTCAACACGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAAAAACATGTTTATTTTCTGGATATTACAACCAATACTTTTCAAACATTTGTTCTTGACCCGTGCGTCACGTTCACGCATGGTAAACACAC-CACAT-TCT-AAGAAATTGTTTCTATGACCACGGGGCTGATTTTTACTACATTATTTAACATATTTTTAATA-AAACAATCCGTAC
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAATTAAGGAAAAACTTGGTTTTTGGCCACCTTCGGACCAAAAATATCTGTTTTTCATCAATTTCAACCCGTTC
gi|21                         :                                                      GTGATTTAATTTTTC-CGTCGCCTCACAGT-GTCCAACCCGAAATTGGTACCAGCTGGCGCCGCCTAGCGGTGAGttt
gi|22                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      t------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCa
gi|3                          :                                                   ctaGTGATTTAATTTTTC-CGTTGCTTCACAGG-CTCCAACCCAAAATTCAGACCCACTGGCACTGCTTAGCTGTGAGATGATTGAACCATTTAGGCATTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAAA---TCAAAGTTCATTATTTTCAACAAGTTCCACAGACCTTAATATTAGGTCTACAATTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGAATAGATTCTTGTTTTTACCACAAATAAATTTGTAAA--CTCGTTAAA----GACCAGTGCAGCACGTGCAAACATAGTACCTAAACGCAG-AAATAAATTTTATTTTTACTCTTTTTGCTGAAG-A--GC--CTGGTGTTCAAACATG-CATGTGTGGTTGTTGGCAG-----TCATTCAATTCGTACAGTGGACATATAGGTACACTCTGATATCCAGATTGATGGGTTCCGATTAAG-TA-----TTTTC-------GAAAAAA--TCTCATACCAACAAATATG--ATTTATTC-----AAATTTTTTACCAT-GTTCCATGCATCCGGGGCACCTTATTCCTAGCGCTAATGAGATGATTGTTACATCATTTCTTAGGGATTTCCAATGA---CTACAGTCTACAGAAATCAAACATATCATATACTACAGTTATTGACCTGTCCGGTAGGCTGAA---ACAT---------CCCTTAGAAATAGT-TAT-TTTT------------------AGCTAAAAACAATTATGTTCGAACG-GTTTTTTGGCATGGGTTGACCGGTTTGCCAGAGGTCATTAGCCCGATCTCGAACTTTTACTTGGG--TTTTCTACAAG-GTTTAT----AAATAAAACTATAGTCATTAAAGGTCTAATGAAAAAAAA
gi|4                          :                                                                                                                                                                                                                                                                aagtTCACGGCTTTTCACGGC-TTTTTTT-TAGAAAAAGTCAAATTCCATAATTTTCAAAAAGTTCCACAGACTTCAATATTTGGTCGACAGGTCTG--TTTTTT-GTA-CCATT-CTTTATCGGAACATTTTTATTTTCTTGTTTTTACCACAGATAGTTTT-TAAAAATATATTAAA----GACCCGTGAGACACGGACAAACATAGAACCTAAACGCAG-AAATCAATTTTATGTTCACTATTTTTACTGTAGCG---C--ACGTGCTTCAAACATG-CACATGTGGTTGTTGGTAC-----TCCTTCAATTCGTACAGGGAACATCTAGGTACACTCTGATATACAGATTGATAGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAT--TCACACACCGGCAAATATGAAATGT--TCAAG--A--TTTTTCACTAT-TCGCCACGCATCTCCGGGACCACATCGGTAGCACTAGGGA-ATGAGTTTTACATCATTCATTAGAAAAACCCAATGC---CAACATCCACTATCAATCGGATATATCATATACTACGGATATTGCCCTGTCCGGCATGCTCGA---AC-----------GCTCCAGAAATAGT-AA--TTTTGACGTTTATTTGCCTCAAA---------------GTCCGAACG-TTTTTACGGCAATGTTCGACCGGCTCGCCTTAGGTCATTAGCCTGGCCGGGAACTTTAACG-GTGTTTTTTCTGCAAT-GCTTATCGTTAGATAAAGC----G--ATT---GATGTAA--AAAAACAATTCGAAAG-CATATTATATATT--------ATAATTAGTGA-AGTAGGGTCATTTGAAATTAAGGAAAAAaaac
gi|5                          :                                             caagtattaGTGATTTAATTTTTTTCGCGACCTCACAGG-CTCCAACCCGAAACTCGGACCCACTGTCGCCGCCTAGCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCGCTGC-----ACGGCATTTTTTTTCCGAAA---TCAAAGTTCATCATTTTCAACAAGTTCCACATACCTTAATATTGGGTCTACAATTCTG--ACTTTT-GTA-CCATT-CTTTAGCGGAACATGTACAGGTTCTTGTTTTTACCACAAATAATTTTGC-CGAATTCATTAACGGGTGACCCGTTCAGCACGTGCAAACATAGTACCTTAGCGCAGAAAATAAATTTTA-----ATTGTTTTTGCTGTGGC---AC--AC-GAGTTCGAACATGCCAC-GGTGGTTGTTGGTaacactacgtacaa
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           agaGGTTGATGGGTTCCGAT-AAG-TA-----ATTTC-------GAAAAAA--T---------------ATG--ATTT--TTTCAAAA--TTTTT-ACCAT-GTTCCACGCATCCC-GGCACATTATTCCTAGCATTAGGGAAGTGATTTT-ACATCATTCTTTAGGAATTTCCAATGC---CTACAGTCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTG------------AA---ACAT---------GCTCCAGAAATATTCAA--TTTT------------------T---------------GCTCAAAtgatgggttccgataagtaatttcgaaaaaatatgattttttcaaaatttttaccatgttccacgcatcccggcacattattcctagcattagggaagtgattttacatcattctttaggaatttccaatgcctacagtccccagaaatcaaacatatcatatactacggttattgacctgaaacatgctccagaaatattcaatttttgctcaaag
gi|6                          : agagtgatttaatttttttcgcgacctcacaggctccaacccgaaactcggacccactgtcgccgcctagcggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctctacaagtcgctgcacggcattttttttccgaaatcaaagttcatcattttcaacaagttccacataccttaatattgggtctacaattctgacttttgtaccattctttagcggaacatgtacaggttcttgtttttaccacaaataattttgccgaattcattaacgggtgacccgttcagcacgtgcaaacatagtaccttagcgcagaaaataaattttaattgtttttgctgtggcacacgagttcgaacatgccacggtggttgttGCAT-AAAT-AATTTTATTTTCACTCTTTTTTCTGTAGTG---C--ACGGGGTTCGAACATG-CATGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGTCATCTAGGTTTACTCTGATACCCAGATTGATGGGTTCCGAT-AAGATT-----TTTTT-------GAAAAA---TCGCATACCGACAAATATG--ATTT--T-----------TTTCAAAATTGTT--AC-CATGCCTGGCAGCTTATTCCTAGCACTGTGGAGGTGATATTTATATCATTCCTTAGGGATTTCTAATGA---ATACAGCCCCCAGAAATCAAACATATCATATAGTACG-TTATTGACCTGTCCGATAGGCTCAAGAAACATTCATTTTTTGCTC-AAAAACGAC-TA------------------------A---------------GTCCGAACG-TTTTTTCGGCACGGGTTGACCg
gi|7                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             tttggttAATTTTATTTTCACTCTTTTTGCTGTAGCG---C--ACGAGGTTCGAACAAG-CATGGGTGGTTGTTGGTAG-----TCGTTCAACTCGTACAGGGGACATCTAGGTACACTCTGATACCCAGATTGATGGCTTCCGAT-AAG-TATTTTTTTTTT-------TAAAAAA--TCGCATACCGGCAAATATG--ATTT--TTTCAA-A--ATTTTGACCAT-GTTCCACGCATCCCTGACACCTTATTCCTAGTACTATGGAGGTGATATTTACACCATTCCTTAGGGATTTCTAATGCCTACTACAGCCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTGTCCGGTAGGCTGAA---ACAT---------ACTCAAGAAATATT-CATTTTTT------------------G---------------CTCCGAACG-TTTTTTCAGTATGGGTTGACC
gi|8                          :                                                                                                                                                                                                                                                                                                                                                              tTG--TTTCTT-GTA-CCATT-TTTTATCGGAACATGTATATTTTCTTGATTTTACCACAAATAGTTTTTTAAAAAAATAATAAG----GACCCGTGCGACAAAGCCAAACATAGAACCTAAACGCAG-AAATCAATTTTATTTTCACTCTTTTTACTGTAGC---GT--AAGTGCTTCAAACATG-CACATGCGGTTGTTGGTAC-----TCCTTCAACTCGTACAGGGAACATCTAGGTGCACTATGATATACAGATTGAT------------AG-TA-----TTTTC-------GAAATAA--TCACACTCCGGCAAATATGAAATGT--TCAAG--A--TTTTTTACCAT-GTGCCACGCATTTCCGGGACCTTATCGGTAGCACTAGGG-GATGAT
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGTTTCGACAGATGTCATTAGCCCGATCTCGAACATAAACTCGGG--TTTTCTGCAAG-GTTTATGGTCTGATAAAGC----A--ATT---GGAGTAA-GAAAA-TAATTCTTAAC-CA----------T--------ATACTTAGTGAATA-AGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAATCCGTGACCAAATCTTTATTAATTCACATAAACGGTTTAATTTGGTATCATTATT


blockSeqs                     :                                                                     T   G   C      .                                                                     NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN                 TTTTC    CA       T     AAA                                   T        T         G    TT      T   G     T                   AA                          G     A         GGGT                                       A    C                A            GAAG GA                C                   ACTAC                                                              T   A  TTTTT     TGAAGAA       AC  T   A            AA  T AT TTCAAAA       C     T              C                                                              CTA                  G                                            GAA    TCATTTTTT    C         CA TTTTGACGTTTATTTGCCTCAAA                          T                                                            GG   TT           T                   TATAGTC   AAA       T     AC     G    A  TAATATATATT           A       A  T                              G                        T                       A                                                             C    T A                                 A                         T       G   A    ACC     .   AAG                                        T               A  A  A
blockSeqs                     :                                                                     .   C   T      .                                                                     NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN                 TTTTC    CA       .     AAA                                   T        T         G    .       .   .     .                   GA                          G     A         .                                          .    C                A            AG   .                 .                   .                                                                  .   .  .         .             .   G   A            AA  T .  TTCAAA        T     .              G                                                              .                    A                                            .      .            T         G  TTTTTAGCTAAAAACAATTAT                            .                                                            GG   .            .                   G         .         .     AC     G    .  TATTATATATT           A       .  A                              T                        T                       C                                                                                                                                                                                                                               
blockSeqs                     :                                                                     .   T   T      .                                                                                                                                                                                      TTTTC    CA       .     AAA                                   C        A         T    .       .   .     .                   GA                          G     A         .                                          .    C                A            G    .                 .                   .                                                                  .   .  .         .             .   T   A            A   G .  CAAGA         C     .              C                                                              .                    G                                            .      .            C         T  TTTTTTG                                          .                                                            TC   .            .                   G         .         .     CT     A    .  TTATATATA             C       .  T                              G                        .                       C                                                                                                                                                                                                                               
blockSeqs                     :                                                                     .   G   T      .                                                                                                                                                                                      .        C        .     A                                     C        A         T    .       .   .     .                   TT                          T     A         .                                          .    C                A            G    .                 .                   .                                                                  .   .  .         .             .   A   A            .   T .  CAAGA         C     .              T                                                              .                    A                                            .      .            C         A  TTTTT                                            .                                                            TT   .            .                   A         .         .     AA     G    .  T                     A       .  T                                                                                                                                                                                                                                                                                                               
blockSeqs                     :                                                                                                                                                                                                                                                                           .        C        .     A                                     T        T         G    .       .   .     .                   TT                          G     A         .                                          .    A                A            G    .                 .                   .                                                                  .   .  .         .             .   G   A            .   T .  CAAA          G     .              T                                                              .                    A                                            .      .            A         T  A                                                .                                                            TC   .            .                   G         .         .     AC     T    .  T                     C       .  .                                                                                                                                                                                                                                                                                                               
blockSeqs                     :                                                                                                                                                                                                                                                                           .        .        .     .                                     C        G         T    .       .   .     .                   GG                          G     A         .                                          .    C                T            G    .                 .                   .                                                                  .   .  .         .             .   G   T            .   T .  CA            T     .              C                                                              .                    A                                            .      .            .         C  A                                                .                                                            G    .            .                   A         .         .     T                                                                                                                                                                                                                                                                                                                                                               
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                         .                       .       .   .     .                   GA                          G     .         .                                          .    A                T            G    .                 .                   .                                                                  .   .  .         .             .   A   .            .   G .  .             .     .              .                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                 .       .   .     .                   TT                          T     .         .                                          .    C                T            G    .                 .                   .                                                                  .   .  .         .             .   .   .            .   . .  .                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                         .   .     .                   GG                          .     .         .                                          .    .                T            A    .                 .                   .                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                         .   .     .                   TT                          .     .         .                                          .                     T            G    .                 .                   .                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              .                     T            G    .                 .                   .                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 G    .                 .                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      


blockSeqCons                  :                                                                                                                                                                                                                                                                           TTTTC    CA             AAA                                                                                                                                                                                                                                                                                                                                                                                                      CAAA*****                                                                                                                                                                                            TTTTTGCAAA******************************                                                                                                                                                     TTATATATT**********
originalCons                  :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGTTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--ATTT--TC-----A--TTTTTCACCAT-GTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTCAA---ACAT---------GCTCCAGAAATAGT-NA--TTTT------------------A---------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAAAC-CA----------T--------ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAANATGTNTNCTTTCTGGATACTACAACCAATACTTTTCAAACNTTTGTCCTTGACCCGTGCGCCACGTNCACGCATGGTANACACACANACATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
finalCons                     :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGTTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--ATTT--TCAAA-----TTTTTCACCAT-GTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTCAA---ACAT---------GCTCCAGAAATAGT-NATTTTTGCAAA------------------------------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAAAC-CATTATATATT----------ATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAANATGTNTNCTTTCTGGATACTACAACCAATACTTTTCAAACNTTTGTCCTTGACCCGTGCGCCACGTNCACGCATGGTANACACACANACATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC





Alignments
lowQualScore                  :                                                                                                                                                          999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999                 22222    11             222                                                                                                                                                                                                                           2222                                                                                                                 11111     1111111                            222222          11111                                                                                         111                                                                                 1111    8888888888888888888888888888888888888888                                                                                                            1111111   111                               4444444444                                                                                                                                                                                                                                       1        3333    1   2222                                                          11             
lowQualScore                  :                                                                     8   3   3      8                                                                     666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666                 00000    22       5     111      0                            2        1         1    66      3   3     3     0          0  11                          8     6         7777                          0            3    2                1            9999 44                3     0             88888                                                              4   4  11111     4444444       66  1   2            111111 1 66 66  11111 0    1                   3                     0  0 2                                   000            0     1                                   0     0    1  0          0 6666    8888888888888888888888888888888888888888         5                                                 0          77   77           5      0  0         8888888   000       5     11     1    6 99  1111111111   1       6  3                              1              0         7                       1                                                             1    1 1                                 1                         1       5   1    0000    5   4444                                       1               1  66 1           
lowQualScore                  :                                                                     .   .   .      .                                                                     ................................................................................................                 .....    ..       .     ...      .                            .        .         .    ..      .   .     .     .          .  ..                          .     .         ....                          .            .    .                .            .... ..                .     .             .....                                                              .   .  .....     .......       ..  .   .            ...... . .. ..  ..... .    .                   .                     .  . .                                   ...            .     .                                   .     .    .  .          . ....    ........................................         .                                                 .          ..   ..           .      .  .         .......   ...       .     ..     .    . ..  ..........   .       .  .                              .              .         .                       .                                                             .    . .                                 .                         .       .   .    ....    .   ....                                       .               .  .. .           
lowQualScore                  :                                                                     0   2   8      0                                                                     000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000                 33333    66       7     666      7                            2        0         3    11      6   6     6     5          4  55                          2     5         7777                          5            3    5                8            0000 22                1     8             33333                                                              4   4  11111     4444444       11  9   0            666666 8 11 11  88888 8    1                   4                     2  4 2                                   000            7     4                                   4     7    4  7          7 1111    9999999999999999999999999999999999999999         7                                                 7          66   99           7      7  4         1111111   000       7     99     0    7 22  8888888888   0       7  5                              0              2         0                       0                                                             0    0 0                                 0                         0       0   0    0000    0   5555                                       0               0  55 0           
consensus                     :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGTTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--A---TTT--T--CA---A-ATTTTTCACCATGTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTCAAACATGCTCCAGAAATAGT-NA-TTTT----------T-G--C---A---------AA---------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAAAC-C--AT--TATATATTATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAANATGTNTNCTTTCTGGATACTACAACCAATACTTTTCAAACNTTTGTCCTTGACCCGTGCGCCACGTNCACGCATGGTANACACACANACATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
Reference ( family-217 )      :                                                      GTGATTTAATTTTTC-CGCCGCCTCACAGG-CTCCAACCCGAAATTCGGACCCGCTGGCGCCGCCTAGCGGTGAGGACATTGAACCATTTAGGCATCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGCTTTTCACGGCATTTTTTT-CAGAAAAAGTCAAAGTTCATCATTTTCAACAAGTTCCACAGACCTTAATATTNGGTCTACAGTTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGTGTAGNTTCTTGTTTTTACCACAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCGACACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCTTTTTGCTGTAGCG--GC--ACGGGGTTCGAACATG-CACGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--A---TTT--T--CA---A-ATTTTTCACCATGTTCCACGCATCCCCGGCACCTTATTCCTAGCACTAGGGAGGTGATTTTTACATCATTCCTTAGGGATTTCCAATGC---CTACAGCCCCCAGAAATCGAACATATCATATACTACGGTTATTGACCTGTCCGGCAGGCTCAAACATGCTCCAGAAATAGT-NA-TTTT----------T-G--C---A---------AA---------GTCCGAACG-TTTTTTCGGCATGGGTTGACCGGTTCGCCAGAGGTCATTAGCCCGATCTCGAACTTTAACNCGGG--TTTTCTGCAAG-GCTTATGGTCAGATAAAGC----G--ATT---GGTGTAA-GAAAAACAATTCGAAAC-C--AT--TATATATTATANTTAGTGA-TGTAGGGTCATTTGAAATTAAGGAAAAACTGGGNTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAACNCGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAANATGTNTNCTTTCTGGATACTACAACCAATACTTTTCAAACNTTTGTCCTTGACCCGTGCGCCACGTNCACGCATGGTANACACACANACATGTCTAAAGAAATTGTTTCTGTGACCACGGGGCTGATTTTCACTACATNATTTAACATATTTTTNATNTANACAATCCGCAC
gi|1                          :                                                      GTTATTTAATTTTTC-CGCCGCC-CATAAGTCTCCAACCCGGAATTTGGACCCACTGGCGCTGCCTAGCAGTGGAGACA
gi|1                          :                                                                                                                                                                                                                                                           tagtACAAGTCACGGCATTTCATG----TTTTTT-CACAA---GTCAAAGTTCACCATTTTCAACAAGTTCCACAGACCTTAATATTGGGTCTACAATTCTG--ATTTTG-GTA-CCATT-CTTTAGCGGAACATGTGTAGGTTCTGTTTTTTACAACAAATAATTTC-TAAAAATTCATTAAC----GACCCGTGCGGCACGTGCATACATGATACCTAAGCGCTA-AAATACATTTTAATTATACTATTTTTGCTGTAGCG---C--ACGGGGTTCGAACATG-CATGGGTGGCTGCTGGTAC-----TCGTTCAATTCGTACAGGGGACATCTATGCTCACTCTGGTACCCAGTTTTATGGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAAAATG--A---TTT--T--TTTTTA-ATTTTTCACCATGTTCCACGCATCCCCGGCGCCTTATTCCTGGCACTAGGGAGGTGATTTTTACATCATTCCTTAGCGATTACCAATGC---CTACAGCCCCCATAA-TCAAACACATCATATACTACGGCTATTGACCTGTCCGGCAGGCCCAAACATGGTCCAGAAATAGT-GA-TTTT----------T-GG-CTTGA---------AA---------GTCCGAACG-TTTTTTCGGCATGGTTTGACCCGTTCCCCAGAGGTCATTAGCCCGATTTCAAACTTTAACCCGGG--TTTTCTGCAAG-GTTTATGGTCAGATAAAGC----C--ATT---GGTGTAA-GAAAAATAATGCTAAAC-C--AT----------ACACTTAGCGA-TATAGGGTCATTTGAAATTAAGGAAAATCTGGGTTTTGGGCCATTTTCTGACCAAAAACAGCCGTTTTTCATCAATTTCAACACGCTCCAAATTCTTTATTATTTCACATAAACGGCTGATTTTGGTATCATTATTTAGAGAAAAATGTATTCTTTCTGGATACTACAACCAATACTTTTCAAACCTTTGTCCTTGACCCGTGCGCCACGTGCACGCAT-GTACACAC-TAAATATGTCTAA--AAATTGTTTCTGTGACCACGGGGCTGATTTTCACTATATAATTTAACATATTTTTTATCTACACAATCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggacaacaagtcacggcatttcatgttttttcacaagtcaaagttcaccattttcaacaagttccacagaccttaatattgggtctacaattctgattttggtaccattctttagcggaacatgtgtaggttctgttttttacaacaaataatttctaaaaattcattaacgacccgtgcggcacgtgcatacatgatacctaagcgctaaaatacattttaattatactatttttgctgtagcgcacggggttcgaacatgcatgggtggctgctggtactcgttcaattcgtacaggggacatctatgctcactctggtacccagttttatgggttccgataagtattttcgaaaaaatcgcataccggcaaaaatgatttttttttaatttttcaccatgttccacgcatccccggcgccttattcctggcactagggaggtgatttttacatcattccttagcgattaccaatgcctacagcccccataatcaaacacatcatatactacggctattgacctgtccggcaggcccaaacatggtccagaaatagtgatttttggcttgaaagtccgaacgttttttcggcatggtttgacccgttccccagaggtcattagcccgatttcaaactttaacccgggttttctgcaaggtttatggtcagataaagccattggtgtaagaaaaataatgctaaaccatacacttagcgatatagggtcatttgaaattaaggaaaatctgggttttgggccattttctgaccaaaaacagccgtttttcatcaatttcaacacgctccaaattctttattatttcacataaacggctgattttggtatcattatttagagaaaaatgtattctttctggatactacaaccaatacttttcaaacctttgtccttgacccgtgcgccacgtgcacgcatgtacacactaaatatgtctaaaaattgtttctgtgaccacggggctgattttcactatataatttaacatattttttatctacacaatccacac
gi|10                         :                                                                                                                                                       tagtgttatttaatttttccgccgcccataagtctccaacccggaatttggacccactggcgctgcctagcagtggagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttggaca--ATTGTT-GTA-CCATT-CTTTAGCGGAATATGTGTTAATTCATGTTTTAACCACAAATAAGTTTGCAAAG-TTCATTAAC----AACCCGTGCAATACGTGTAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGATAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATGTCGTACCCAGATTGATG
gi|11                         :                                                                                                                                                                                                                                                                                                                                                                     TTTG-GTAGCCATT-CTTTAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCAAAA-TTCATTAAC----GACCCGTGCAATACGTGCAAACATAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCCAGATTGATG
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                        g-GTA-CCATT-CTTAAGCGGAATATGTGTTGATTCTTGTTTTAACCACAAATAAGTTTGCTAAA-TTCATTAAC----AACCCGTGTAATACGTGCAAACATAGTACCTAAGCACAA-AAATCAATTTTATTTTCACTCATTGTGCTGTAGC---GC--ATGGGGTTCGAACATA-CACGGTTGATTATTGGTAG-----TTGTGTAATTCGTACAGGGGACATCTAGGAACAATCTCGTACCCAGATTGATG
gi|13                         :                                                                                                                                                                                                                                                                    TCACGGCTTTTCACAG--TTTTTTT-TAGAAAAAGTCAAATTTCATCATTTTCAACAAGTTCCACAAAATTCAATACATGGTCTACAGGTCTGTTATTTTT-GTA-CCATT-CTTTATCTGAACATGTATATTGTCTTGTTTTTACCACAAATAGTTTT-CAAAAAAATATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAA
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 caagtattaCCGTAGCG---C--ACATACTTCCAACATG-CACGGAT-GTTGTTGGTAAACTACTTGTTAAAATCGTACAA-------------ACACTCTGATATACAGATTAGTAGGTTCCAAT-AAG-TA-----TTTTTTGAAGAAGAAAAAAACTCTCAT--CTGCAAATATGA-A---ATT--T--CA---
gi|15                         :                                                                                                                                                                                                                                                                                            aaaatttaacttattaagtatgtctgaatatctgaTTACACAGAC--------TTGGTCTACAGGTCTG--TTTTTTTGTA-CCATTTCTTTATCTGAACATGTTTATTGTCTTGTTTTTACCACAAATAGTTTTTAAAAAAAT-ATTAAT----GACCCGTGCGACACGGCCAAACATAGAACCTAAACGCAG-AAtgat
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              aaactATTAGCCTGGTCTGGAACTTTAACGGTGT--TTTTCTGCAAATGCTTATGGTTAGATAAAGC----G--ATT---GATGTAA-GAAAAACAATTCGAAGCAT--AT--TATATATAATAATTAGTGA-TGTAGTGTCATTTGAAATTAAGGAAAA
gi|17                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                tcaATTAGCCTGACCTGGAACTTTAACGGCGT--TTTTCTGCAAT-GCTTATGGTTAGATAAAGT----G--ATT---GGTGTAA-GAAAAACAATTCGAAAG-C--ATAATATATATTATGATTAGTGA-TGAAGTGTCATTTGAAATTAAGGAAAAA
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   aAATTTTATTTTCACTCATTTTGCTGTAGTG---C--ATGGGGTTCGAACATA-CACGGTTGGTTATTGGTAG-----TCGTGTAATTCGTACAGGGGACATCTAGGTACAATCTCGTACCAAGATTGATG
gi|19                         :                                                                                                                                                                                                                                                                    TCACGGCTTTTCACAGC--TTTTTT-TAGAAAAAGTCAAATTTCTTCATTTTCAAAAAGTTCCACAGACTTTA
gi|2                          :                                             caagtattaGTCATTTAATTTGTC-CGTGGCCCCTAAGG-CTCCAACGCGAAACTCGGACCCGCTGGCACCGCTTAGCGAAGAGGACATTGAACCATTTAGGCATCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAA---GTCAAAGTTCATCATTTTCAACAAGTGCCACAGACCTTAATATTAGGTCTACTATTCTG--ATTTTT-GTA-CCATT-CTTTAACGGAATATGTGAAGGTTCTTGTTTTTACCATAAATAATTTTGCAAAAATTCATTAAC----GACCCGTGCAGCACGTGCAAACAAAGTACCTAAGCGCAG-AAATCAATTTTATTTTCACTCATTTTGCTGTAGCGAAGCGAACGGTGTTCGAACATA-CACGGTTGATTGTTGGTAG-----TCATTCAATTCGTACAGGGGACATCTAGGTACACTCTGGTACCCAGATTGATGGGTTCCAAG-AAG-TA-----TTTTC-------GAAAAAA--TCGCATACCGGCAAATATG--A---T---------------TTTTTCACCAAGTTCCATGCATCCCCGACACCTTATTCCTAGCACTAAGGTAATGATTGTTATATAATTCCTTAGGGATTTTCAATGC---CTACAGTCCCCATAAATCGAACAT---ATATGCTACGGTTATTGATCTGTCCGGCAGGCTCAAACATGGTCCACAAATGGT-G-----------------------------------AA---------GTCCGAACGTTTTTTTCGGCATGGGTTGACCGGTTCGACAGAGGTCATTAGCCCGATCTCGAACTTGAACTCGGG--TTTTCTGCAAG-GTTTATGGTCAGATAAATC----A--ATT---GGTGTAA-GAAAACTAATTCATAAC-C--A----------TATACTTAGGGA-TTTAGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCAGACCAAAAA-AGCTGTTTTTTATCGATTTCAACACGTTCCAAAATCTTTATTAATTCACATAAACGGCTGATTTTGGTATCATTATTTAGAAAAACATGTTTATTTTCTGGATATTACAACCAATACTTTTCAAACATTTGTTCTTGACCCGTGCGTCACGTTCACGCATGGTAAACACAC-CACAT-TCT-AAGAAATTGTTTCTATGACCACGGGGCTGATTTTTACTACATTATTTAACATATTTTTAATA-AAACAATCCGTAC
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAATTAAGGAAAAACTTGGTTTTTGGCCACCTTCGGACCAAAAATATCTGTTTTTCATCAATTTCAACCCGTTC
gi|21                         :                                                      GTGATTTAATTTTTC-CGTCGCCTCACAGT-GTCCAACCCGAAATTGGTACCAGCTGGCGCCGCCTAGCGGTGAGttt
gi|22                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                t---------AA---------GTCCGAACG-TTTTTTCGGCATGGGTTGACCa
gi|3                          :                                                    ctGTGATTTAATTTTTC-CGTTGCTTCACAGG-CTCCAACCCAAAATTCAGACCCACTGGCACTGCTTAGCTGTGAGATGATTGAACCATTTAGGCATTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCACGGC-----ACGGCATTTTTTT-CAGAAA---TCAAAGTTCATTATTTTCAACAAGTTCCACAGACCTTAATATTAGGTCTACAATTCTG--ATTTTT-GTA-CCATT-CTTTAGCGGAACATGAATAGATTCTTGTTTTTACCACAAATAAATTTGTAAA--CTCGTTAAA----GACCAGTGCAGCACGTGCAAACATAGTACCTAAACGCAG-AAATAAATTTTATTTTTACTCTTTTTGCTGAAG-A--GC--CTGGTGTTCAAACATG-CATGTGTGGTTGTTGGCAG-----TCATTCAATTCGTACAGTGGACATATAGGTACACTCTGATATCCAGATTGATGGGTTCCGATTAAG-TA-----TTTTC-------GAAAAAA--TCTCATACCAACAAATATG--A---TTTATT--CA---A-ATTTTTTACCATGTTCCATGCATCCGGGGCACCTTATTCCTAGCGCTAATGAGATGATTGTTACATCATTTCTTAGGGATTTCCAATGA---CTACAGTCTACAGAAATCAAACATATCATATACTACAGTTATTGACCTGTCCGGTAGGCTGAAACATCCCTTAGAAATAGT-TA-TTTT----------TAG--CT--A---------AAAACAATTATGTTCGAACG-GTTTTTTGGCATGGGTTGACCGGTTTGCCAGAGGTCATTAGCCCGATCTCGAACTTTTACTTGGG--TTTTCTACAAG-GTTTAT----AAATAAAACTATAGTCATTAAAGGTCTAATGAAAAAAAA
gi|4                          :                                                                                                                                                                                                                                                                aagtTCACGGCTTTTCACGGC-TTTTTTT-TAGAAAAAGTCAAATTCCATAATTTTCAAAAAGTTCCACAGACTTCAATATTTGGTCGACAGGTCTG--TTTTTT-GTA-CCATT-CTTTATCGGAACATTTTTATTTTCTTGTTTTTACCACAGATAGTTTT-TAAAAATATATTAAA----GACCCGTGAGACACGGACAAACATAGAACCTAAACGCAG-AAATCAATTTTATGTTCACTATTTTTACTGTAGCG---C--ACGTGCTTCAAACATG-CACATGTGGTTGTTGGTAC-----TCCTTCAATTCGTACAGGGAACATCTAGGTACACTCTGATATACAGATTGATAGGTTCCGAT-AAG-TA-----TTTTC-------GAAAAAT--TCACACACCGGCAAATATG--AAA-TGT--T--CA---AGATTTTTCACTATTCGCCACGCATCTCCGGGACCACATCGGTAGCACTAGGGAA-TGAGTTTTACATCATTCATTAGAAAAACCCAATGC---CAACATCCACTATCAATCGGATATATCATATACTACGGATATTGCCCTGTCCGGCATGCTCGAAC--GCTCCAGAAATAGT-AA-TTTTGACGTTTATTT-G--CCTCA---------AA---------GTCCGAACG-TTTTTACGGCAATGTTCGACCGGCTCGCCTTAGGTCATTAGCCTGGCCGGGAACTTTAACG-GTGTTTTTTCTGCAAT-GCTTATCGTTAGATAAAGC----G--ATT---GATGTAA--AAAAACAATTCGAAAG-CATAT--TATATATTATAATTAGTGA-AGTAGGGTCATTTGAAATTAAGGAAAAAaaac
gi|5                          :                                             caagtattaGTGATTTAATTTTTTTCGCGACCTCACAGG-CTCCAACCCGAAACTCGGACCCACTGTCGCCGCCTAGCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTACAAGTCGCTGC-----ACGGCATTTTTTTTCCGAAA---TCAAAGTTCATCATTTTCAACAAGTTCCACATACCTTAATATTGGGTCTACAATTCTG--ACTTTT-GTA-CCATT-CTTTAGCGGAACATGTACAGGTTCTTGTTTTTACCACAAATAATTTTGC-CGAATTCATTAACGGGTGACCCGTTCAGCACGTGCAAACATAGTACCTTAGCGCAGAAAATAAATTTTA-----ATTGTTTTTGCTGTGGC---AC--AC-GAGTTCGAACATGCCAC-GGTGGTTGTTGGTaacactacgtacaa
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           agaGGTTGATGGGTTCCGAT-AAG-TA-----ATTTC-------GAAAAAA--T---------------ATG--A---TTT--TTTCA---A-AATTTTTACCATGTTCCACGCATCCC-GGCACATTATTCCTAGCATTAGGGAAGTGATTTT-ACATCATTCTTTAGGAATTTCCAATGC---CTACAGTCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTG------------AAACATGCTCCAGAAATATTCAA-TTTT----------T-GCTC---A---------AA---------Gtgatgggttccgataagtaatttcgaaaaaatatgattttttcaaaatttttaccatgttccacgcatcccggcacattattcctagcattagggaagtgattttacatcattctttaggaatttccaatgcctacagtccccagaaatcaaacatatcatatactacggttattgacctgaaacatgctccagaaatattcaatttttgctcaaag
gi|6                          : agagtgatttaatttttttcgcgacctcacaggctccaacccgaaactcggacccactgtcgccgcctagcggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctctacaagtcgctgcacggcattttttttccgaaatcaaagttcatcattttcaacaagttccacataccttaatattgggtctacaattctgacttttgtaccattctttagcggaacatgtacaggttcttgtttttaccacaaataattttgccgaattcattaacgggtgacccgttcagcacgtgcaaacatagtaccttagcgcagaaaataaattttaattgtttttgctgtggcacacgagttcgaacatgccacggtggttgttGCAT-AAAT-AATTTTATTTTCACTCTTTTTTCTGTAGTG---C--ACGGGGTTCGAACATG-CATGGGTGGTTGTTGGTAG-----TCGTTCAATTCGTACAGGGGTCATCTAGGTTTACTCTGATACCCAGATTGATGGGTTCCGAT-AAGATT-----TTTTT-------G-AAAAA--TCGCATACCGACAAATATG--ATTTTTT--T--CA---A-AATTGTTACCATG-----------CCTGGCAGCTTATTCCTAGCACTGTGGAGGTGATATTTATATCATTCCTTAGGGATTTCTAATGA---ATACAGCCCCCAGAAATCAAACATATCATATAGTAC-GTTATTGACCTGTCCGATAGGCTCA----------AGAAACATT-CATTTTT----------T-GCTC---AAAAACGACTAA---------GTCCGAACG-TTTTTTCGGCACGGGTTGACC
gi|7                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             tttggttAATTTTATTTTCACTCTTTTTGCTGTAGCG---C--ACGAGGTTCGAACAAG-CATGGGTGGTTGTTGGTAG-----TCGTTCAACTCGTACAGGGGACATCTAGGTACACTCTGATACCCAGATTGATGGCTTCCGAT-AAG-TATTTTTTTTTT-------TAAAAAA--TCGCATACCGGCAAATATG--ATT-TTT--T--CA---A-AATTTTGACCATGTTCCACGCATCCCTGACACCTTATTCCTAGTACTATGGAGGTGATATTTACACCATTCCTTAGGGATTTCTAATGCCTACTACAGCCCCCAGAAATCAAACATATCATATACTACGGTTATTGACCTGTCCGGTAGGCTGAAACATACTCAAGAAATATT-CATTTTT----------T-G--C-------------------------TCCGAACG-TTTTTTCAGTATGGGTTGACC
gi|8                          :                                                                                                                                                                                                                                                                                                                                                              tTG--TTTCTT-GTA-CCATT-TTTTATCGGAACATGTATATTTTCTTGATTTTACCACAAATAGTTTTTTAAAAAAATAATAAG----GACCCGTGCGACAAAGCCAAACATAGAACCTAAACGCAG-AAATCAATTTTATTTTCACTCTTTTTACTGTAGC---GT--AAGTGCTTCAAACATG-CACATGCGGTTGTTGGTAC-----TCCTTCAACTCGTACAGGGAACATCTAGGTGCACTATGATATACAGATTGAT------------AG-TA-----TTTTC-------GAAATAA--TCACACTCCGGCAAATATGAAA---TGT--T--CA---AGATTTTTTACCATGTGCCACGCATTTCCGGGACCTTATCGGTAGCACTAGGG-GATGAT
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGTTTCGACAGATGTCATTAGCCCGATCTCGAACATAAACTCGGG--TTTTCTGCAAG-GTTTATGGTCTGATAAAGC----A--ATT---GGAGTAA-GAAAA-TAATTCTTAAC-C--AT----------ATACTTAGTGAATA-AGGGTCATTTGAAATTAAGGAAAAACTGGGGTTTTGGCCACTTTCGGACCAAAAATAGCTGTTTTTCATCAATTTCAATCCGTGACCAAATCTTTATTAATTCACATAAACGGTTTAATTTGGTATCATTATT