lowQualScore : 111111111
lowQualScore : 22222 11111 222222 1111111111111111 1111111 11 11 111 999999999999999999999999999999999999 33333333333333333333 6666666666666666 666666666 1
lowQualScore : 6 11111 55 3 88888 2 000000 8888888888888888 2 6666666 9 66 66 111 111111111111111111111111111111111111 11 4 3 44444444444444444444 3 9999999999999999 6 000000000 6 3 7 7 6
lowQualScore : . ..... .. . ..... . ...... ................ . ....... . .. .. ... .................................... .. . . .................... . ................ . ......... . . . . .
lowQualScore : 0 99999 00 3 22222 3 999999 7777777777777777 5 8888888 4 00 66 777 000000000000000000000000000000000000 66 0 2 00000000000000000000 0 1111111111111111 7 000000000 0 7 0 7 0
consensus : TTCATGTCTCATC----ATA--TGTACAA-----CAACATAG------AACATAGTACA-TTT-----ACATAAAATA-------ACATATGCCATTCT-NAAAAG-AATTATAAGAGACGATA---TACAA----------------------CTCATA--------AAATATTTCTTCTAATCACATATAAT------TATTACG-TTTATTTACAT-TCTTTTTTAAANA-AAAGTTGAAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAACGTACTTAA
Reference ( gi|2 ) : TTCGTGTCTCATC----CTA--TGCACAA-----CAACATAG------AACACAATGCA-TTT-----ACATAAAATA-------ACATATGCTATTCT-TAAAAT-AATTATAAGAGACAATA---TACAA----------------------CTTATA--------AAATATTTCTTCTAATCACATATAAT------TATTACGATTTATTTATATCTCTTTTTTAAATA-AAAGTTGAAAACCCATTGCTATCATTGTTTATCTTGACTTTCGTCTTAAAAGCACTTAATA
gi|4 : TTCATGTCTCATC----ATAAATTTACAT-----TTACATAG------AACATAGTAGA-TTT-----ACATAGAATA-------GCATATGCCTGTCT-AAAAAG-AATTATAAGAGACAATA---TACAA----------------------CTCATG--------AAATATTTCCTTTGAATATATATAAT------TATCACAATTTATTTACA----TTTTTTAGAGA-AAA
gi|18 : aTTCATGTCTCATC----ATA--TGCACAC-----CAGCATAT------AACATCGTACA-TGT-----ACATAAAATAAC-----ACATATGCCATTCT-AAAAAT-AATTATtaattatcatttgacaagcaat
gi|3 : aTGTCTCATT----ATA--TGTACAA-----CAACATAG------TACATAGTACA-TTT-----A------ATA-------ACATATGGCATTCT-AAAAAG-AATTATAAGAGACAATATAGTATAA----------------------TATATAATAATTATAAATA-TTCTTCTTATCACA------------TATTGTG---TATTTACA---CTATATTAAAAAGAAAGTTGTAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAACGTACTTAA
gi|5 : taaTGTCTCATC----ATA--TGCACAA-----TAACATAG------AACATAGTACA-TTTT----GCTCAAAATA-------ACATATGTCATTCT-TAACAG-AATTATAAGAGACGATA---TACAA----------------------ATCGTG--------AAATAT--------AT-GCAT----T------T-------TTTGTTTATA----------------AAAGTTAAAAACCCATTGCTA---------ATCTTGACTTCCTTCTAAAAAGTgcaa
gi|19 : atatttattaaTGTCTCATC----ATA--TGTAAAA-----CAACATAT------AACATAGTACA-TAT-----ACACAACATA-------GCATATGtc
gi|1 : GTCTCATCATAATTA--TGCAAAA-----CAATATAG------AATATAGTACA-ATT-----ACATAAAA-A-------ACATATGTCAATCT-AAAAAG-AATTATAAGAGACAATA---AACAATATACTCATAAAACATTCCTACCTCATA--------AAATATTTCTTCTAATCATATATAATAACGTGTATTACATTTTATTTACATTTTGTTTT--AATA-AACGTTGAAAA-CCATTTCTA---------ATCTTGACTTCCATCTAAAATGTTCTTAAaca
gi|16 : cattatcGTCTCATC----ATA--TGTACAA-----T--TATAG------AACACA--GTA-TTA-----AAAC-AAATA-------CTATATAC-ATTAT-TAAAAGAAATTACAAGAGACaggaatgaataacttccacaa
gi|6 : atagtttattaacGTCTTATC----ATA--TGTACAA-----T--CATA-----------CAATACAGTTTGTAAAACATAATATATGTCACAACATATGTCATTCCATATAAG-AATTATAAGAGACGATA---TACgg
gi|14 : atagcatattaacGTCTCATC----ATA--TGAACAATTAAACAATACAGTTTATAAACA-AATA-----------ACATAATACG-------ACATATGCCATTCTATATGAG-AATTATAAGAGACGAttactagtacacttaataaatacatttttaaagtatgttacatcagtgatctatccacatctatgtta
gi|13 : aatagtttatgaacGTCTCATC----ATA--TGAACAATTAAACAATACAGTTTATAAACA-AATA-----------ACATAATACG-------ACATATGCCATTCTATATGAG-AATTATAAGAGACGA
gi|10 : ttaatagtctatgaacTCTTATC----ATA--TGTACAA-----TAACACAG------AACATAGTACACTTT-----ACATAAAATA-------ACATATGCCATTCT-AAAAAG-AATTACAAGAGACAATA---T---A----------------------CT--TA--------AAATATTTCTTCTAACCACATATAAT------AATTACAGTTCATTCTCAT-TCTTTT
9 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|7 ): TTTACTATTATTTATAACGACAATTTAGCTGGATGTTCCAAGTCATCAATGTGTTTCTCTGCCGTTTTACTTTAAAAATGCCATTTTGTAATACCATGTGGCATCAAATATTCGATTACATGGTACCTCTAATTCATATATACGATATCAAGTATTCAAAATGGATATGATTTTTTC
Unaligned ( gi|8 ): ATTATTAGTTTTATTATTAATGACAATAACTGGATGTTCCAAGTCATCAATGTTTTCTCCGCCATTTTACTTTTTAATGCCATTTTGTAAGACCACGTGACACCAAATATTTGATTACATGATACCTCTAATTCGTATAAACCATATCAAGTTTTCAGAATGAATATGTTTT
Unaligned ( gi|9 ): AGTAGTAGTAGTATTAGGCAACAGCTGGATAATCCAAGTCATCAACGTGTTTCTCCGCCGTTTTACCTTTTAATGTCATTTTGTGAAACGTGACAGTACACTTAATATATACAGTTTTTAAAGTATGTAACATATGAAATGGTATCACGTTTTCGTATATGTGATATCACA
Unaligned ( gi|11 ): GCCGTTTTACTTTTTAATGCGATTTTGTAATACCACACGTTCAGTCACGTGATATCGAATATTCGATTACATGATATCAATTATATATATATTAATTATTCACATGCTATGTTAT
Unaligned ( gi|12 ): ACTTGATAGCTTATTAACATCTTTTCATATGTATAATTATAATGCAATTTCAAATACAAGTAACAGCTTACAACATAAGTAAGTATTCAAATCAGAATTATAAGAGACTA
Unaligned ( gi|15 ): ATTAAGTAGAGAGAGTATTATCCTCCATATACGACCTTGTCAAATTAAGTTATGAAGGGCATCATATATACGTTGTAAATGTGACATAGACAGAAT
Unaligned ( gi|17 ): GTAAAAAACATTTTTAATTGTTAAACACTTTTTAAATACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATACACGCAACTATGTTGT
Unaligned ( gi|20 ): TGATTCAATAATCGACAGCATACACTAAAATATAATTTA
Unaligned ( gi|21 ): TATGCATATATAATATATATATCGGCATGTGTACGAT
Alignments
lowQualScore : 1111 22222 3333333 111111111 5555555555555555555555555555 444444444444444 2222 444444444
lowQualScore : 2 1111 0 55555 0000000 1 88888 3 1 1 44 2 88 3 3 555555555 3 5555555555555555555555555555 3 1 1 3 444444444444444 6666 3 5 3 8 2 000000000 0 6
lowQualScore : . .... . ..... ....... . ..... . . . .. . .. . . ......... . ............................ . . . . ............... .... . . . . . ......... . .
lowQualScore : 5 7777 3 00000 0000000 7 88888 3 8 3 66 3 33 6 6 000000000 7 3333333333333333333333333333 2 8 0 2 222222222222222 2222 3 6 8 0 5 000000000 2 5
consensus : TTNACGTCTCATCATA----TGTACAA-----CAACATAG-------AACATAGTACA-T-TT-ACATAAAATA--ACATATGCCATTCT-NAA-AAG-AATTATAAGAGACGATATA---CA----ACTCATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTAC-G-TTTATTTACAT-TCTTTTTTAAANA-AAAGTTGAAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAANGTACTTAA
Reference ( family-13476 ) : TTCATGTCTCATCATA----TGTACAA-----CAACATAG-------AACATAGTACA-T-TT-ACATAAAATA--ACATATGCCATTCT-NAA-AAG-AATTATAAGAGACGATATA---CA----ACTCATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTAC-G-TTTATTTACAT-TCTTTTTTAAANA-AAAGTTGAAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAACGTACTTAA
gi|1 : GTCTCATCATAATTATGCAAAA-----CAATATAG-------AATATAGTACA-A-TT-ACATAAAA-A--ACATATGTCAATCT-AAA-AAG-AATTATAAGAGACAATAAA---CAATATACTCATAA--------AACATTCCTACCTCATAAAATATTTCTTCTAATCATATATAATAACGTGTATTAC-ATTTTATTTACAT-TTTGTTTT-AATA-AACGTTGAAAA-CCATTTCTA---------ATCTTGACTTCCATCTAAAATGTTCTTAA
gi|10 : cattatcTCTTATCATA----TGTACAA-----TAACACAG-------AACATAGTACACT-TT-ACATAAAATA--ACATATGCCATTCT-AAA-AAG-AATTACAAGAGACAATAT----------ACT--TAA--------AA------------------TATTTCTTCTAACCACATATAAT------AATTACAG-TTCATTCTCAT-TCTTTTaggaatgaataacttccacaa
gi|13 : ACGTCTCATCATA----TGAACAATTAAACAATACAGTTTATA-AACA-AATA--------ACATAATACG--ACATATGCCATTCTATAT-GAG-AATTATAAGAGACGAc
gi|14 : ttaatagtctatgaACGTCTCATCATA----TGAACAATTAAACAATACAGTTTATA-AACA-AATA--------ACATAATACG--ACATATGCCATTCTATAT-GAG-AATTATAAGAGACGA
gi|16 : aatagtttatgaTTAACGTCTCATCATA----TGTACAA-----T--TATAG-------AACACAGTA-----TT-AAAACAAATA--CTATATA-CATTAT-TAA-AAGAAATTACAAGAGACG
gi|18 : atagtttaTTCATGTCTCATCATA----TGCACAC-----CAGCATAT-------AACATCGTACA-T-GT-ACATAAAATAACACATATGCCATTCT-AAA-AAT-AATTATg
gi|19 : aTGTCTCATCATA----TGTAAAA-----CAACATAT-------AACATAGTACA-T-AT-ACACAACATA--GCATATGACA
gi|2 : TTCGTGTCTCATCCTA----TGCACAA-----CAACATAG-------AACACAATGCA-T-TT-ACATAAAATA--ACATATGCTATTCT-TAA-AAT-AATTATAAGAGACAATATA---CA----ACTTATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTAC-GATTTATTTATATCTCTTTTTTAAATA-AAAGTTGAAAACCCATTGCTATCATTGTTTATCTTGACTTTCGTCTTAAAAGCACTTAA
gi|3 : ATGTCTCATTATA----TGTACAA-----CAACATAG-------TACATAGTACA-T-TT-A------ATA--ACATATGGCATTCT-AAA-AAG-AATTATAAGAGACAATATAGTATA----ATATATAATAATTATAAA------------------TATT-CTTCTTATCACATAT--------------T-G-TGTATTTACA---CTATATTAAAAAGAAAGTTGTAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAACGTACTTAAta
gi|4 : taTTCATGTCTCATCATAAA--TTTACAT-----TTACATAG-------AACATAGTAGA-T-TT-ACATAGAATA--GCATATGCCTGTCT-AAA-AAG-AATTATAAGAGACAATATA---CA----ACTCATGA--------AA------------------TATTTCCTTTGAATATATATAAT------TATCACAA-TTTATTTACA----TTTTTTAGAGA-AAAgcaa
gi|5 : aTTAATGTCTCATCATA----TGCACAA-----TAACATAG-------AACATAGTACA-T-TTTGCTCAAAATA--ACATATGTCATTCT-TAA-CAG-AATTATAAGAGACGATATA---CA----AATCGTGA--------AA------------------TAT--------AT-GCAT----T------T--------TTTGTTTATA----------------AAAGTTAAAAACCCATTGCTA---------ATCTTGACTTCCTTCTAAAAAGTAtaattatcatttgacaagcaat
gi|6 : atatttaTTAACGTCTTATCATA----TGTACAATCATACAATACAGTTTGTAAAACATAATATA-TGTC-ACA---------ACATATGTCATTCC-ATATAAG-AATTATAAGAGACGATATA---Ctc
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|7 ): TTTACTATTATTTATAACGACAATTTAGCTGGATGTTCCAAGTCATCAATGTGTTTCTCTGCCGTTTTACTTTAAAAATGCCATTTTGTAATACCATGTGGCATCAAATATTCGATTACATGGTACCTCTAATTCATATATACGATATCAAGTATTCAAAATGGATATGATTTTTTC
Unaligned ( gi|8 ): ATTATTAGTTTTATTATTAATGACAATAACTGGATGTTCCAAGTCATCAATGTTTTCTCCGCCATTTTACTTTTTAATGCCATTTTGTAAGACCACGTGACACCAAATATTTGATTACATGATACCTCTAATTCGTATAAACCATATCAAGTTTTCAGAATGAATATGTTTT
Unaligned ( gi|9 ): AGTAGTAGTAGTATTAGGCAACAGCTGGATAATCCAAGTCATCAACGTGTTTCTCCGCCGTTTTACCTTTTAATGTCATTTTGTGAAACGTGACAGTACACTTAATATATACAGTTTTTAAAGTATGTAACATATGAAATGGTATCACGTTTTCGTATATGTGATATCACA
Unaligned ( gi|11 ): GCCGTTTTACTTTTTAATGCGATTTTGTAATACCACACGTTCAGTCACGTGATATCGAATATTCGATTACATGATATCAATTATATATATATTAATTATTCACATGCTATGTTAT
Unaligned ( gi|12 ): ACTTGATAGCTTATTAACATCTTTTCATATGTATAATTATAATGCAATTTCAAATACAAGTAACAGCTTACAACATAAGTAAGTATTCAAATCAGAATTATAAGAGACTA
Unaligned ( gi|15 ): ATTAAGTAGAGAGAGTATTATCCTCCATATACGACCTTGTCAAATTAAGTTATGAAGGGCATCATATATACGTTGTAAATGTGACATAGACAGAAT
Unaligned ( gi|17 ): GTAAAAAACATTTTTAATTGTTAAACACTTTTTAAATACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATACACGCAACTATGTTGT
Unaligned ( gi|20 ): TGATTCAATAATCGACAGCATACACTAAAATATAATTTA
Unaligned ( gi|21 ): TATGCATATATAATATATATATCGGCATGTGTACGAT
Alignments
lowQualScore : 1111 22222 3333333 111111111 5555555555555555555555555555 444444444444444 2222 444444444
lowQualScore : 1 1111 0 55555 0000000 1 88888 3 1 1 44 2 88 3 3 555555555 3 5555555555555555555555555555 3 1 1 3 444444444444444 6666 3 5 3 8 2 000000000 0 1
lowQualScore : . .... . ..... ....... . ..... . . . .. . .. . . ......... . ............................ . . . . ............... .... . . . . . ......... . .
lowQualScore : 0 7777 3 00000 0000000 7 88888 3 8 3 66 3 33 6 6 000000000 7 3333333333333333333333333333 2 8 0 2 222222222222222 2222 3 6 8 0 5 000000000 2 0
consensus : TTAACGTCTCATCATA----TGTACAA-----CAACATAG-------AACATAGTACA-T-TT-ACATAAAATA--ACATATGCCATTCT-NAA-AAG-AATTATAAGAGACGATATA---CA----ACTCATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTAC-G-TTTATTTACAT-TCTTTTTTAAANA-AAAGTTGAAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAANGTACTTAA
Reference ( family-13476 ) : TTNACGTCTCATCATA----TGTACAA-----CAACATAG-------AACATAGTACA-T-TT-ACATAAAATA--ACATATGCCATTCT-NAA-AAG-AATTATAAGAGACGATATA---CA----ACTCATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTAC-G-TTTATTTACAT-TCTTTTTTAAANA-AAAGTTGAAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAANGTACTTAA
gi|1 : CGTCTCATCATAATTATGCAAAA-----CAATATAG-------AATATAGTACA-A-TT-ACATAAAA-A--ACATATGTCAATCT-AAA-AAG-AATTATAAGAGACAATAAA---CAATATACTCATAA--------AACATTCCTACCTCATAAAATATTTCTTCTAATCATATATAATAACGTGTATTAC-ATTTTATTTACAT-TTTGTTTT-AATA-AACGTTGAAAA-CCATTTCTA---------ATCTTGACTTCCATCTAAAATGTTCTTAA
gi|10 : cattatTCTTATCATA----TGTACAA-----TAACACAG-------AACATAGTACACT-TT-ACATAAAATA--ACATATGCCATTCT-AAA-AAG-AATTACAAGAGACAATAT----------ACT--TAA--------AA------------------TATTTCTTCTAACCACATATAAT------AATTACAG-TTCATTCTCAT-TCTTTTaggaatgaataacttccacaa
gi|13 : ACGTCTCATCATA----TGAACAATTAAACAATACAGTTTATA-AACA-AATA--------ACATAATACG--ACATATGCCATTCTATAT-GAG-AATTATAAGAGACGAc
gi|14 : ttaatagtctatgaACGTCTCATCATA----TGAACAATTAAACAATACAGTTTATA-AACA-AATA--------ACATAATACG--ACATATGCCATTCTATAT-GAG-AATTATAAGAGACGA
gi|16 : aatagtttatgaTTAACGTCTCATCATA----TGTACAA-----T--TATAG-------AACACAGTA-----TT-AAAACAAATA--CTATATA-CATTAT-TAA-AAGAAATTACAAGAGACG
gi|18 : atagtttaTTCATGTCTCATCATA----TGCACAC-----CAGCATAT-------AACATCGTACA-T-GT-ACATAAAATAACACATATGCCATTCT-AAA-AAT-AATTATg
gi|19 : aGTCTCATCATA----TGTAAAA-----CAACATAT-------AACATAGTACA-T-AT-ACACAACATA--GCATATGACA
gi|2 : tTTCGTGTCTCATCCTA----TGCACAA-----CAACATAG-------AACACAATGCA-T-TT-ACATAAAATA--ACATATGCTATTCT-TAA-AAT-AATTATAAGAGACAATATA---CA----ACTTATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTAC-GATTTATTTATATCTCTTTTTTAAATA-AAAGTTGAAAACCCATTGCTATCATTGTTTATCTTGACTTTCGTCTTAAAAGCACTTAA
gi|3 : TAATGTCTCATTATA----TGTACAA-----CAACATAG-------TACATAGTACA-T-TT-A------ATA--ACATATGGCATTCT-AAA-AAG-AATTATAAGAGACAATATAGTATA----ATATATAATAATTATAAA------------------TATT-CTTCTTATCACATAT--------------T-G-TGTATTTACA---CTATATTAAAAAGAAAGTTGTAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAACGTACTTAAta
gi|4 : TTCATGTCTCATCATAAA--TTTACAT-----TTACATAG-------AACATAGTAGA-T-TT-ACATAGAATA--GCATATGCCTGTCT-AAA-AAG-AATTATAAGAGACAATATA---CA----ACTCATGA--------AA------------------TATTTCCTTTGAATATATATAAT------TATCACAA-TTTATTTACA----TTTTTTAGAGA-AAAgcaa
gi|5 : aTTAATGTCTCATCATA----TGCACAA-----TAACATAG-------AACATAGTACA-T-TTTGCTCAAAATA--ACATATGTCATTCT-TAA-CAG-AATTATAAGAGACGATATA---CA----AATCGTGA--------AA------------------TAT--------AT-GCAT----T------T--------TTTGTTTATA----------------AAAGTTAAAAACCCATTGCTA---------ATCTTGACTTCCTTCTAAAAAGTAtaattatcatttgacaagcaat
gi|6 : atatttaTTAACGTCTTATCATA----TGTACAATCATACAATACAGTTTGTAAAACATAATATA-TGTC-ACA---------ACATATGTCATTCC-ATATAAG-AATTATAAGAGACGATATA---Ctc
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|7 ): TTTACTATTATTTATAACGACAATTTAGCTGGATGTTCCAAGTCATCAATGTGTTTCTCTGCCGTTTTACTTTAAAAATGCCATTTTGTAATACCATGTGGCATCAAATATTCGATTACATGGTACCTCTAATTCATATATACGATATCAAGTATTCAAAATGGATATGATTTTTTC
Unaligned ( gi|8 ): ATTATTAGTTTTATTATTAATGACAATAACTGGATGTTCCAAGTCATCAATGTTTTCTCCGCCATTTTACTTTTTAATGCCATTTTGTAAGACCACGTGACACCAAATATTTGATTACATGATACCTCTAATTCGTATAAACCATATCAAGTTTTCAGAATGAATATGTTTT
Unaligned ( gi|9 ): AGTAGTAGTAGTATTAGGCAACAGCTGGATAATCCAAGTCATCAACGTGTTTCTCCGCCGTTTTACCTTTTAATGTCATTTTGTGAAACGTGACAGTACACTTAATATATACAGTTTTTAAAGTATGTAACATATGAAATGGTATCACGTTTTCGTATATGTGATATCACA
Unaligned ( gi|11 ): GCCGTTTTACTTTTTAATGCGATTTTGTAATACCACACGTTCAGTCACGTGATATCGAATATTCGATTACATGATATCAATTATATATATATTAATTATTCACATGCTATGTTAT
Unaligned ( gi|12 ): ACTTGATAGCTTATTAACATCTTTTCATATGTATAATTATAATGCAATTTCAAATACAAGTAACAGCTTACAACATAAGTAAGTATTCAAATCAGAATTATAAGAGACTA
Unaligned ( gi|15 ): ATTAAGTAGAGAGAGTATTATCCTCCATATACGACCTTGTCAAATTAAGTTATGAAGGGCATCATATATACGTTGTAAATGTGACATAGACAGAAT
Unaligned ( gi|17 ): GTAAAAAACATTTTTAATTGTTAAACACTTTTTAAATACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATACACGCAACTATGTTGT
Unaligned ( gi|20 ): TGATTCAATAATCGACAGCATACACTAAAATATAATTTA
Unaligned ( gi|21 ): TATGCATATATAATATATATATCGGCATGTGTACGAT
Alignments
lowQualScore : 1111 11111 3333333 111111111 5555555555555555555555555555 444444444444444 2222 444444444
lowQualScore : 1111 0 66666 88888 0000000 1 88888 3 1 1 44 2 88 3 3 555555555 3 5555555555555555555555555555 3 1 1 3 444444444444444 6666 3 5 3 8 2 000000000 0 1
lowQualScore : .... . ..... ..... ....... . ..... . . . .. . .. . . ......... . ............................ . . . . ............... .... . . . . . ......... . .
lowQualScore : 7777 3 77777 33333 0000000 7 88888 3 8 3 66 3 33 6 6 000000000 7 3333333333333333333333333333 2 8 0 2 222222222222222 2222 3 6 8 0 5 000000000 2 0
consensus : TTAACGTCTCATCATA----TGTAC-----AA-----CAACATAG-------AACATAGTACA-T-TT-ACATAAAATA--ACATATGCCATTCT-NAA-AAG-AATTATAAGAGACGATATA---CA----ACTCATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTAC-G-TTTATTTACAT-TCTTTTTTAAANA-AAAGTTGAAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAANGTACTTAA
Reference ( family-13476 ) : TTAACGTCTCATCATA----TGTAC-----AA-----CAACATAG-------AACATAGTACA-T-TT-ACATAAAATA--ACATATGCCATTCT-NAA-AAG-AATTATAAGAGACGATATA---CA----ACTCATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTAC-G-TTTATTTACAT-TCTTTTTTAAANA-AAAGTTGAAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAANGTACTTAA
gi|1 : TTATCGTCTCATCATAATTATGCAA-----AA-----CAATATAG-------AATATAGTACA-A-TT-ACATAAAA-A--ACATATGTCAATCT-AAA-AAG-AATTATAAGAGACAATAAA---CAATATACTCATAA--------AACATTCCTACCTCATAAAATATTTCTTCTAATCATATATAATAACGTGTATTAC-ATTTTATTTACAT-TTTGTTTT-AATA-AACGTTGAAAA-CCATTTCTA---------ATCTTGACTTCCATCTAAAATGTTCTTAA
gi|10 : caTCTTATCATA----TGTAC-----AA-----TAACACAG-------AACATAGTACACT-TT-ACATAAAATA--ACATATGCCATTCT-AAA-AAG-AATTACAAGAGACAATAT----------ACT--TAA--------AA------------------TATTTCTTCTAACCACATATAAT------AATTACAG-TTCATTCTCAT-TCTTTTaggaatgaataacttccacaa
gi|13 : AACGTCTCATCATA----TGAACAATTAAA-----CAATACAGTTTATA-AACA-AATA--------ACATAATACG--ACATATGCCATTCTATAT-GAG-AATTATAAGAGACGAc
gi|14 : ttaatagtctatgAACGTCTCATCATA----TGAACAATTAAA-----CAATACAGTTTATA-AACA-AATA--------ACATAATACG--ACATATGCCATTCTATAT-GAG-AATTATAAGAGACGA
gi|16 : aatagtttatgTTAACGTCTCATCATA----TGTAC-----AA-----T--TATAG-------AACACAGTA-----TT-AAAACAAATA--CTATATA-CATTAT-TAA-AAGAAATTACAAGAGACG
gi|18 : atagtttaTTCATGTCTCATCATA----TGCAC-----AC-----CAGCATAT-------AACATCGTACA-T-GT-ACATAAAATAACACATATGCCATTCT-AAA-AAT-AATTATg
gi|19 : aGTCTCATCATA----TGTAA-----AA-----CAACATAT-------AACATAGTACA-T-AT-ACACAACATA--GCATATGACA
gi|2 : tGTCTCATCCTA----TGCAC-----AA-----CAACATAG-------AACACAATGCA-T-TT-ACATAAAATA--ACATATGCTATTCT-TAA-AAT-AATTATAAGAGACAATATA---CA----ACTTATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTAC-GATTTATTTATATCTCTTTTTTAAATA-AAAGTTGAAAACCCATTGCTATCATTGTTTATCTTGACTTTCGTCTTAAAAGCACTTAA
gi|3 : ttcgtTAATGTCTCATTATA----TGTAC-----AA-----CAACATAG-------TACATAGTACA-T-TT-A------ATA--ACATATGGCATTCT-AAA-AAG-AATTATAAGAGACAATATAGTATA----ATATATAATAATTATAAA------------------TATT-CTTCTTATCACATAT--------------T-G-TGTATTTACA---CTATATTAAAAAGAAAGTTGTAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAACGTACTTAAta
gi|4 : TTCATGTCTCATCATAAA--TTTAC-----AT-----TTACATAG-------AACATAGTAGA-T-TT-ACATAGAATA--GCATATGCCTGTCT-AAA-AAG-AATTATAAGAGACAATATA---CA----ACTCATGA--------AA------------------TATTTCCTTTGAATATATATAAT------TATCACAA-TTTATTTACA----TTTTTTAGAGA-AAAgcaa
gi|5 : aTTAATGTCTCATCATA----TGCAC-----AA-----TAACATAG-------AACATAGTACA-T-TTTGCTCAAAATA--ACATATGTCATTCT-TAA-CAG-AATTATAAGAGACGATATA---CA----AATCGTGA--------AA------------------TAT--------AT-GCAT----T------T--------TTTGTTTATA----------------AAAGTTAAAAACCCATTGCTA---------ATCTTGACTTCCTTCTAAAAAGTAtaattatcatttgacaagcaat
gi|6 : atatttaTTAACGTCTTATCATA----TGTAC-----AATCATACAATACAGTTTGTAAAACATAATATA-TGTC-ACA---------ACATATGTCATTCC-ATATAAG-AATTATAAGAGACGATATA---Ctc
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|7 ): TTTACTATTATTTATAACGACAATTTAGCTGGATGTTCCAAGTCATCAATGTGTTTCTCTGCCGTTTTACTTTAAAAATGCCATTTTGTAATACCATGTGGCATCAAATATTCGATTACATGGTACCTCTAATTCATATATACGATATCAAGTATTCAAAATGGATATGATTTTTTC
Unaligned ( gi|8 ): ATTATTAGTTTTATTATTAATGACAATAACTGGATGTTCCAAGTCATCAATGTTTTCTCCGCCATTTTACTTTTTAATGCCATTTTGTAAGACCACGTGACACCAAATATTTGATTACATGATACCTCTAATTCGTATAAACCATATCAAGTTTTCAGAATGAATATGTTTT
Unaligned ( gi|9 ): AGTAGTAGTAGTATTAGGCAACAGCTGGATAATCCAAGTCATCAACGTGTTTCTCCGCCGTTTTACCTTTTAATGTCATTTTGTGAAACGTGACAGTACACTTAATATATACAGTTTTTAAAGTATGTAACATATGAAATGGTATCACGTTTTCGTATATGTGATATCACA
Unaligned ( gi|11 ): GCCGTTTTACTTTTTAATGCGATTTTGTAATACCACACGTTCAGTCACGTGATATCGAATATTCGATTACATGATATCAATTATATATATATTAATTATTCACATGCTATGTTAT
Unaligned ( gi|12 ): ACTTGATAGCTTATTAACATCTTTTCATATGTATAATTATAATGCAATTTCAAATACAAGTAACAGCTTACAACATAAGTAAGTATTCAAATCAGAATTATAAGAGACTA
Unaligned ( gi|15 ): ATTAAGTAGAGAGAGTATTATCCTCCATATACGACCTTGTCAAATTAAGTTATGAAGGGCATCATATATACGTTGTAAATGTGACATAGACAGAAT
Unaligned ( gi|17 ): GTAAAAAACATTTTTAATTGTTAAACACTTTTTAAATACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATACACGCAACTATGTTGT
Unaligned ( gi|20 ): TGATTCAATAATCGACAGCATACACTAAAATATAATTTA
Unaligned ( gi|21 ): TATGCATATATAATATATATATCGGCATGTGTACGAT
Alignments
lowQualScore : 1111 11111 3333333 111111111 5555555555555555555555555555 444444444444444 2222 444444444
lowQualScore : 1111 0 66666 88888 0000000 1 88888 3 1 1 44 2 88 3 3 555555555 3 5555555555555555555555555555 3 1 1 3 444444444444444 6666 3 5 3 8 2 000000000 0 1
lowQualScore : .... . ..... ..... ....... . ..... . . . .. . .. . . ......... . ............................ . . . . ............... .... . . . . . ......... . .
lowQualScore : 7777 3 77777 33333 0000000 7 88888 3 8 3 66 3 33 6 6 000000000 7 3333333333333333333333333333 2 8 0 2 222222222222222 2222 3 6 8 0 5 000000000 2 0
consensus : TTAACGTCTCATCATA----TGTAC-----AA-----CAACATAG-------AACATAGTACA-T-TT-ACATAAAATA--ACATATGCCATTCT-NAA-AAG-AATTATAAGAGACGATATA---CA----ACTCATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTAC-G-TTTATTTACAT-TCTTTTTTAAANA-AAAGTTGAAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAANGTACTTAA
Reference ( family-13476 ) : TTAACGTCTCATCATA----TGTAC-----AA-----CAACATAG-------AACATAGTACA-T-TT-ACATAAAATA--ACATATGCCATTCT-NAA-AAG-AATTATAAGAGACGATATA---CA----ACTCATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTAC-G-TTTATTTACAT-TCTTTTTTAAANA-AAAGTTGAAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAANGTACTTAA
gi|1 : TTATCGTCTCATCATAATTATGCAA-----AA-----CAATATAG-------AATATAGTACA-A-TT-ACATAAAA-A--ACATATGTCAATCT-AAA-AAG-AATTATAAGAGACAATAAA---CAATATACTCATAA--------AACATTCCTACCTCATAAAATATTTCTTCTAATCATATATAATAACGTGTATTAC-ATTTTATTTACAT-TTTGTTTT-AATA-AACGTTGAAAA-CCATTTCTA---------ATCTTGACTTCCATCTAAAATGTTCTTAA
gi|10 : caTCTTATCATA----TGTAC-----AA-----TAACACAG-------AACATAGTACACT-TT-ACATAAAATA--ACATATGCCATTCT-AAA-AAG-AATTACAAGAGACAATAT----------ACT--TAA--------AA------------------TATTTCTTCTAACCACATATAAT------AATTACAG-TTCATTCTCAT-TCTTTTaggaatgaataacttccacaa
gi|13 : AACGTCTCATCATA----TGAACAATTAAA-----CAATACAGTTTATA-AACA-AATA--------ACATAATACG--ACATATGCCATTCTATAT-GAG-AATTATAAGAGACGAc
gi|14 : ttaatagtctatgAACGTCTCATCATA----TGAACAATTAAA-----CAATACAGTTTATA-AACA-AATA--------ACATAATACG--ACATATGCCATTCTATAT-GAG-AATTATAAGAGACGA
gi|16 : aatagtttatgTTAACGTCTCATCATA----TGTAC-----AA-----T--TATAG-------AACACAGTA-----TT-AAAACAAATA--CTATATA-CATTAT-TAA-AAGAAATTACAAGAGACG
gi|18 : atagtttaTTCATGTCTCATCATA----TGCAC-----AC-----CAGCATAT-------AACATCGTACA-T-GT-ACATAAAATAACACATATGCCATTCT-AAA-AAT-AATTATg
gi|19 : aGTCTCATCATA----TGTAA-----AA-----CAACATAT-------AACATAGTACA-T-AT-ACACAACATA--GCATATGACA
gi|2 : tGTCTCATCCTA----TGCAC-----AA-----CAACATAG-------AACACAATGCA-T-TT-ACATAAAATA--ACATATGCTATTCT-TAA-AAT-AATTATAAGAGACAATATA---CA----ACTTATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTAC-GATTTATTTATATCTCTTTTTTAAATA-AAAGTTGAAAACCCATTGCTATCATTGTTTATCTTGACTTTCGTCTTAAAAGCACTTAA
gi|3 : ttcgtTAATGTCTCATTATA----TGTAC-----AA-----CAACATAG-------TACATAGTACA-T-TT-A------ATA--ACATATGGCATTCT-AAA-AAG-AATTATAAGAGACAATATAGTATA----ATATATAATAATTATAAA------------------TATT-CTTCTTATCACATAT--------------T-G-TGTATTTACA---CTATATTAAAAAGAAAGTTGTAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAACGTACTTAAta
gi|4 : TTCATGTCTCATCATAAA--TTTAC-----AT-----TTACATAG-------AACATAGTAGA-T-TT-ACATAGAATA--GCATATGCCTGTCT-AAA-AAG-AATTATAAGAGACAATATA---CA----ACTCATGA--------AA------------------TATTTCCTTTGAATATATATAAT------TATCACAA-TTTATTTACA----TTTTTTAGAGA-AAAgcaa
gi|5 : aTTAATGTCTCATCATA----TGCAC-----AA-----TAACATAG-------AACATAGTACA-T-TTTGCTCAAAATA--ACATATGTCATTCT-TAA-CAG-AATTATAAGAGACGATATA---CA----AATCGTGA--------AA------------------TAT--------AT-GCAT----T------T--------TTTGTTTATA----------------AAAGTTAAAAACCCATTGCTA---------ATCTTGACTTCCTTCTAAAAAGTAtaattatcatttgacaagcaat
gi|6 : atatttaTTAACGTCTTATCATA----TGTAC-----AATCATACAATACAGTTTGTAAAACATAATATA-TGTC-ACA---------ACATATGTCATTCC-ATATAAG-AATTATAAGAGACGATATA---Ctc
blockSeqs : AA AATTA TCATA TTTGTAA T CACT T T A AC C AT T A GTATA T TAATTATAAA T A C A AATTACAG TCTC T A T G C TCATTGTTT A
blockSeqs : . AATTA . TTTATA C TATG . T T . C AT . . CA T AA T A C A TATTACGA TTC T A A . C . C
blockSeqs : . . . TTTATA T CAT . T T . C A . . CA C AA T T C A TATCACAA C A A G . C . A
blockSeqs : . . . . T CAT . A A . C T . . CA C AA . G T . TG . T . . .
blockSeqs : . . . . C CAT . T A . A A . . . . AA . . . . T . .
blockSeqs : . . . . T CAT . C C . C T . .
blockSeqs : . . . . T GAT . T A . G A . .
blockSeqs : . . . . T CAT . T A . C A . .
blockSeqs : . . . . T . . C A . T T . .
blockSeqs : . . . . . . . . . . T A . .
blockSeqs : . . . . . . . . . . .
blockSeqCons : **** CA******* AA************************** TATTACGA******* C***
originalCons : TTAACGTCTCATCATA----TGTAC-----AA-----CAACATAG-------AACATAGTACA-T-TT-ACATAAAATA--ACATATGCCATTCT-NAA-AAG-AATTATAAGAGACGATATA---CA----ACTCATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTAC-G-TTTATTTACAT-TCTTTTTTAAANA-AAAGTTGAAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAANGTACTTAA
finalCons : TTAACGTCTCATCATA----TGTAC-----AA-----CAACATAG-------AACATAGTACA-T-TT-ACATAAAATA--ACATATGCCATTCT-NAA-AAG-AATTATAAGAGACGATATACA-------ACTCATAAAA--------------------------TATTTCTTCTAATCACATATAATTATTACGA-------TTTATTTACAC---TTTTTTAAANA-AAAGTTGAAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAANGTACTTAA
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|7 ): TTTACTATTATTTATAACGACAATTTAGCTGGATGTTCCAAGTCATCAATGTGTTTCTCTGCCGTTTTACTTTAAAAATGCCATTTTGTAATACCATGTGGCATCAAATATTCGATTACATGGTACCTCTAATTCATATATACGATATCAAGTATTCAAAATGGATATGATTTTTTC
Unaligned ( gi|8 ): ATTATTAGTTTTATTATTAATGACAATAACTGGATGTTCCAAGTCATCAATGTTTTCTCCGCCATTTTACTTTTTAATGCCATTTTGTAAGACCACGTGACACCAAATATTTGATTACATGATACCTCTAATTCGTATAAACCATATCAAGTTTTCAGAATGAATATGTTTT
Unaligned ( gi|9 ): AGTAGTAGTAGTATTAGGCAACAGCTGGATAATCCAAGTCATCAACGTGTTTCTCCGCCGTTTTACCTTTTAATGTCATTTTGTGAAACGTGACAGTACACTTAATATATACAGTTTTTAAAGTATGTAACATATGAAATGGTATCACGTTTTCGTATATGTGATATCACA
Unaligned ( gi|11 ): GCCGTTTTACTTTTTAATGCGATTTTGTAATACCACACGTTCAGTCACGTGATATCGAATATTCGATTACATGATATCAATTATATATATATTAATTATTCACATGCTATGTTAT
Unaligned ( gi|12 ): ACTTGATAGCTTATTAACATCTTTTCATATGTATAATTATAATGCAATTTCAAATACAAGTAACAGCTTACAACATAAGTAAGTATTCAAATCAGAATTATAAGAGACTA
Unaligned ( gi|15 ): ATTAAGTAGAGAGAGTATTATCCTCCATATACGACCTTGTCAAATTAAGTTATGAAGGGCATCATATATACGTTGTAAATGTGACATAGACAGAAT
Unaligned ( gi|17 ): GTAAAAAACATTTTTAATTGTTAAACACTTTTTAAATACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATACACGCAACTATGTTGT
Unaligned ( gi|20 ): TGATTCAATAATCGACAGCATACACTAAAATATAATTTA
Unaligned ( gi|21 ): TATGCATATATAATATATATATCGGCATGTGTACGAT
Alignments
lowQualScore : 1111 11111 3333333 111111111 5555555555555555555555555555 22222222222222 1111 444444444
lowQualScore : 1111 0 66666 88888 0000000 1 88888 3 1 1 44 2 88 3 3 555555555 3 5555555555555555555555555555 3 1 1 3 44444444444444 1 9999 1 6 1 1 8 2 000000000 0 1
lowQualScore : .... . ..... ..... ....... . ..... . . . .. . .. . . ......... . ............................ . . . . .............. . .... . . . . . . ......... . .
lowQualScore : 7777 3 77777 33333 0000000 7 88888 3 8 3 66 3 33 6 6 000000000 7 3333333333333333333333333333 2 8 0 2 77777777777777 0 5555 8 7 0 0 0 5 000000000 2 0
consensus : TTAACGTCTCATCATA----TGTAC-----AA-----CAACATAG-------AACATAGTACA-T-TT-ACATAAAATA--ACATATGCCATTCT-NAA-AAG-AATTATAAGAGACGATATA---CA----ACTCATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTACG-TTTATTTACA---CTTT-TTTAAATA-AAAGTTGAAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAANGTACTTAA
Reference ( family-13476 ) : TTAACGTCTCATCATA----TGTAC-----AA-----CAACATAG-------AACATAGTACA-T-TT-ACATAAAATA--ACATATGCCATTCT-NAA-AAG-AATTATAAGAGACGATATA---CA----ACTCATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTACGATTTATTTACA---CTTT-TTTAAANA-AAAGTTGAAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAANGTACTTAA
gi|1 : TTATCGTCTCATCATAATTATGCAA-----AA-----CAATATAG-------AATATAGTACA-A-TT-ACATAAAA-A--ACATATGTCAATCT-AAA-AAG-AATTATAAGAGACAATAAA---CAATATACTCATAA--------AACATTCCTACCTCATAAAATATTTCTTCTAATCATATATAATAACGTGTATTACATTTTATTTACA---TTTTGTTTTAATA-AACGTTGAAAA-CCATTTCTA---------ATCTTGACTTCCATCTAAAATGTTCTTAA
gi|10 : caTCTTATCATA----TGTAC-----AA-----TAACACAG-------AACATAGTACACT-TT-ACATAAAATA--ACATATGCCATTCT-AAA-AAG-AATTACAAGAGACAATAT----------ACT--TAA--------AA------------------TATTTCTTCTAACCACATATAAT------AATTACAGTTCATTCTCA---TTCT-TTTaggaatgaataacttccacaa
gi|13 : AACGTCTCATCATA----TGAACAATTAAA-----CAATACAGTTTATA-AACA-AATA--------ACATAATACG--ACATATGCCATTCTATAT-GAG-AATTATAAGAGACGAc
gi|14 : ttaatagtctatgAACGTCTCATCATA----TGAACAATTAAA-----CAATACAGTTTATA-AACA-AATA--------ACATAATACG--ACATATGCCATTCTATAT-GAG-AATTATAAGAGACGA
gi|16 : aatagtttatgTTAACGTCTCATCATA----TGTAC-----AA-----T--TATAG-------AACACAGTA-----TT-AAAACAAATA--CTATATA-CATTAT-TAA-AAGAAATTACAAGAGACG
gi|18 : atagtttaTTCATGTCTCATCATA----TGCAC-----AC-----CAGCATAT-------AACATCGTACA-T-GT-ACATAAAATAACACATATGCCATTCT-AAA-AAT-AATTATg
gi|19 : aGTCTCATCATA----TGTAA-----AA-----CAACATAT-------AACATAGTACA-T-AT-ACACAACATA--GCATATGACA
gi|2 : tGTCTCATCCTA----TGCAC-----AA-----CAACATAG-------AACACAATGCA-T-TT-ACATAAAATA--ACATATGCTATTCT-TAA-AAT-AATTATAAGAGACAATATA---CA----ACTTATAA--------AA------------------TATTTCTTCTAATCACATATAAT------TATTACGATTTATTTATATCTCTTT-TTTAAATA-AAAGTTGAAAACCCATTGCTATCATTGTTTATCTTGACTTTCGTCTTAAAAGCACTTAA
gi|3 : ttcgtTAATGTCTCATTATA----TGTAC-----AA-----CAACATAG-------TACATAGTACA-T-TT-A------ATA--ACATATGGCATTCT-AAA-AAG-AATTATAAGAGACAATATAGTATA----ATATATAATAATTATAAA------------------TATT-CTTCTTATCACATAT------------TGTG---TATTTACA---CTAT-ATTAAAAAGAAAGTTGTAAACCCATTGCTA---------ATCTTGACTTCCGTCTAAAACGTACTTAAta
gi|4 : TTCATGTCTCATCATAAA--TTTAC-----AT-----TTACATAG-------AACATAGTAGA-T-TT-ACATAGAATA--GCATATGCCTGTCT-AAA-AAG-AATTATAAGAGACAATATA---CA----ACTCATGA--------AA------------------TATTTCCTTTGAATATATATAAT------TATCACAATTTATTTACA----TTT-TTTAGAGA-AAAgcaa
gi|5 : aTTAATGTCTCATCATA----TGCAC-----AA-----TAACATAG-------AACATAGTACA-T-TTTGCTCAAAATA--ACATATGTCATTCT-TAA-CAG-AATTATAAGAGACGATATA---CA----AATCGTGA--------AA------------------TAT--------AT-GCAT----T------T-------TTTGTTTA----------------TA-AAAGTTAAAAACCCATTGCTA---------ATCTTGACTTCCTTCTAAAAAGTAtaattatcatttgacaagcaat
gi|6 : atatttaTTAACGTCTTATCATA----TGTAC-----AATCATACAATACAGTTTGTAAAACATAATATA-TGTC-ACA---------ACATATGTCATTCC-ATATAAG-AATTATAAGAGACGATATA---Ctc
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|7 ): TTTACTATTATTTATAACGACAATTTAGCTGGATGTTCCAAGTCATCAATGTGTTTCTCTGCCGTTTTACTTTAAAAATGCCATTTTGTAATACCATGTGGCATCAAATATTCGATTACATGGTACCTCTAATTCATATATACGATATCAAGTATTCAAAATGGATATGATTTTTTC
Unaligned ( gi|8 ): ATTATTAGTTTTATTATTAATGACAATAACTGGATGTTCCAAGTCATCAATGTTTTCTCCGCCATTTTACTTTTTAATGCCATTTTGTAAGACCACGTGACACCAAATATTTGATTACATGATACCTCTAATTCGTATAAACCATATCAAGTTTTCAGAATGAATATGTTTT
Unaligned ( gi|9 ): AGTAGTAGTAGTATTAGGCAACAGCTGGATAATCCAAGTCATCAACGTGTTTCTCCGCCGTTTTACCTTTTAATGTCATTTTGTGAAACGTGACAGTACACTTAATATATACAGTTTTTAAAGTATGTAACATATGAAATGGTATCACGTTTTCGTATATGTGATATCACA
Unaligned ( gi|11 ): GCCGTTTTACTTTTTAATGCGATTTTGTAATACCACACGTTCAGTCACGTGATATCGAATATTCGATTACATGATATCAATTATATATATATTAATTATTCACATGCTATGTTAT
Unaligned ( gi|12 ): ACTTGATAGCTTATTAACATCTTTTCATATGTATAATTATAATGCAATTTCAAATACAAGTAACAGCTTACAACATAAGTAAGTATTCAAATCAGAATTATAAGAGACTA
Unaligned ( gi|15 ): ATTAAGTAGAGAGAGTATTATCCTCCATATACGACCTTGTCAAATTAAGTTATGAAGGGCATCATATATACGTTGTAAATGTGACATAGACAGAAT
Unaligned ( gi|17 ): GTAAAAAACATTTTTAATTGTTAAACACTTTTTAAATACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATACACGCAACTATGTTGT
Unaligned ( gi|20 ): TGATTCAATAATCGACAGCATACACTAAAATATAATTTA
Unaligned ( gi|21 ): TATGCATATATAATATATATATCGGCATGTGTACGAT