lowQualScore                  :               2                5                                     
lowQualScore                  :               .                .                                     
lowQualScore                  :               4                6                                     
consensus                     :  CATCAAGTTCAAT-GAAGTCGTGTTTGACTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
Reference ( gi|7 )            :  CATCAAGTTCAAT-GAAGTCGTGTTTGACTCCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|1                          :  CATCAAGTTCAAT-GTAGTCGTGTTTGTCTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|5                          : tCATCAAGTTCAAT-GACGTCATGTTTGACTTCACTAGAGAGGACACATAGGATATCTTTAGGTGAAAT
gi|9                          :  CATCAAGTTCAAT-GAAGTGGTATTTGACTTCACTAGATAGGACACATAGGATATCTTCAGGTGAAA
gi|3                          :  CATTAAGTTCAAT-GAAGTCGTCTTTGGCATCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|14                         : tCATCAAGTTCAAT-GAAGTCCTGTTT---TTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|2                          : tCATTAAGTTGAAT-GAAGTCGTGTTTGGCTTCACTAAAGAGGAAACATAGGATATCTTCTGGTGAAAT
gi|16                         : tCATTAAGTCCAAT-GAAGTCGTAT-------CACTAGAGAGGACACAAAGGATAACTTCAGGTGAAGT
gi|6                          :  tATCAAATTCAAT-GAAGTCGAGTTTGACTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|4                          :  tATCAAGTTCAAT-GAAGTCGCGTTTGACTCTACTAGAGAGGACACATAGGATATATTTAGGTGAAAT
gi|11                         :  tATCAAGTTCAAT-GACGTCGTGTTTGACTTCACTAGAGAGGACACATATGATATCTTCAGGTGAAA
gi|13                         :  gATCAAGTTCAAT-GAAATTGTGTTTAACTTCACTAGAGATGACACATAGGATATCTTCAGGTGAAA
gi|12                         :   ATCAAGTTCAAT-GAAATCGTGTTTGACCTCACTAGAGAGGACACATATGATAACCTTGGGTGAAAT
gi|8                          :   ATCAAATTCAAT-GAAGTCGTGTTTGATTTCACTAGAGAGGACCCATAGGCTATCTTACGGTGAAAT
gi|15                         :  tATCAAGTTCAATAGAAGT---GTTTTACTTTACTAGAGAGGACACATAGGATATCTTCAG
gi|18                         :  aATCAAGTTCAAT-GAATTT-TGTTTGACTTCACCAGTGAGGAaggta
gi|10                         :     CAAGTTCAAT-GAAGTCGTGTTTGACTTCACTAGAGAGGACACATAGGATATATTCAGGTGAa
gi|17                         :   tcgAAGTTCAAT-GAAATTGTGTTTGACTTCACTAGAG---------AGGATATCTTCAGGTCAAAca

lowQualScore                  :                2                                                      
lowQualScore                  :                .                                                      
lowQualScore                  :                2                                                      
consensus                     :   CATCAAGTTCAAT-GAAGTCGTGTTTGACTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
Reference ( family-496 )      :   CATCAAGTTCAAT-GAAGTCGTGTTTGACTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|1                          :   CATCAAGTTCAAT-GTAGTCGTGTTTGTCTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|10                         :     tCAAGTTCAAT-GAAGTCGTGTTTGACTTCACTAGAGAGGACACATAGGATATATTCAGGTGA
gi|11                         : tcgATCAAGTTCAAT-GACGTCGTGTTTGACTTCACTAGAGAGGACACATATGATATCTTCAGGTGAAAca
gi|12                         :   gATCAAGTTCAAT-GAAATCGTGTTTGACCTCACTAGAGAGGACACATATGATAACCTTGGGTGAAAT
gi|13                         :    ATCAAGTTCAAT-GAAATTGTGTTTAACTTCACTAGAGATGACACATAGGATATCTTCAGGTGAAA
gi|14                         :   CATCAAGTTCAAT-GAAGTCCTGTTT---TTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|15                         :   tATCAAGTTCAATAGAAGT---GTTTTACTTTACTAGAGAGGACACATAGGATATCTTCAG
gi|16                         :  aCATTAAGTCCAAT-GAAGTCGTAT-------CACTAGAGAGGACACAAAGGATAACTTCAGGTGAAGTaggta
gi|17                         :      tAAGTTCAAT-GAAATTGTGTTTGACTTCACTAGAG---------AGGATATCTTCAGGTCAAA
gi|18                         : acgATCAAGTTCAAT-GAATTT-TGTTTGACTTCACCAGTGAGGA
gi|2                          :   CATTAAGTTGAAT-GAAGTCGTGTTTGGCTTCACTAAAGAGGAAACATAGGATATCTTCTGGTGAAATa
gi|3                          :  tCATTAAGTTCAAT-GAAGTCGTCTTTGGCATCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|4                          :   tATCAAGTTCAAT-GAAGTCGCGTTTGACTCTACTAGAGAGGACACATAGGATATATTTAGGTGAAAT
gi|5                          :  tCATCAAGTTCAAT-GACGTCATGTTTGACTTCACTAGAGAGGACACATAGGATATCTTTAGGTGAAAT
gi|6                          :    ATCAAATTCAAT-GAAGTCGAGTTTGACTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|7                          :  tCATCAAGTTCAAT-GAAGTCGTGTTTGACTCCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|8                          :    ATCAAATTCAAT-GAAGTCGTGTTTGATTTCACTAGAGAGGACCCATAGGCTATCTTACGGTGAAAT
gi|9                          :  tCATCAAGTTCAAT-GAAGTGGTATTTGACTTCACTAGATAGGACACATAGGATATCTTCAGGTGAAA

lowQualScore                  :                2                                                      
lowQualScore                  :                .                                                      
lowQualScore                  :                2                                                      
consensus                     :   CATCAAGTTCAAT-GAAGTCGTGTTTGACTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
Reference ( family-496 )      :   CATCAAGTTCAAT-GAAGTCGTGTTTGACTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|1                          :   CATCAAGTTCAAT-GTAGTCGTGTTTGTCTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|10                         :     tCAAGTTCAAT-GAAGTCGTGTTTGACTTCACTAGAGAGGACACATAGGATATATTCAGGTGA
gi|11                         : tcgATCAAGTTCAAT-GACGTCGTGTTTGACTTCACTAGAGAGGACACATATGATATCTTCAGGTGAAAca
gi|12                         :   gATCAAGTTCAAT-GAAATCGTGTTTGACCTCACTAGAGAGGACACATATGATAACCTTGGGTGAAAT
gi|13                         :    ATCAAGTTCAAT-GAAATTGTGTTTAACTTCACTAGAGATGACACATAGGATATCTTCAGGTGAAA
gi|14                         :   CATCAAGTTCAAT-GAAGTCCTGTTT---TTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|15                         :   tATCAAGTTCAATAGAAGT---GTTTTACTTTACTAGAGAGGACACATAGGATATCTTCAG
gi|16                         :  aCATTAAGTCCAAT-GAAGTCGTAT-------CACTAGAGAGGACACAAAGGATAACTTCAGGTGAAGTaggta
gi|17                         :      tAAGTTCAAT-GAAATTGTGTTTGACTTCACTAGAG---------AGGATATCTTCAGGTCAAA
gi|18                         : acgATCAAGTTCAAT-GAATTT-TGTTTGACTTCACCAGTGAGGA
gi|2                          :   CATTAAGTTGAAT-GAAGTCGTGTTTGGCTTCACTAAAGAGGAAACATAGGATATCTTCTGGTGAAATa
gi|3                          :  tCATTAAGTTCAAT-GAAGTCGTCTTTGGCATCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|4                          :   tATCAAGTTCAAT-GAAGTCGCGTTTGACTCTACTAGAGAGGACACATAGGATATATTTAGGTGAAAT
gi|5                          :  tCATCAAGTTCAAT-GACGTCATGTTTGACTTCACTAGAGAGGACACATAGGATATCTTTAGGTGAAAT
gi|6                          :    ATCAAATTCAAT-GAAGTCGAGTTTGACTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|7                          :  tCATCAAGTTCAAT-GAAGTCGTGTTTGACTCCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|8                          :    ATCAAATTCAAT-GAAGTCGTGTTTGATTTCACTAGAGAGGACCCATAGGCTATCTTACGGTGAAAT
gi|9                          :  tCATCAAGTTCAAT-GAAGTGGTATTTGACTTCACTAGATAGGACACATAGGATATCTTCAGGTGAAA


blockSeqs                     :                A
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .
blockSeqs                     :                .


blockSeqCons                  :   
originalCons                  :   CATCAAGTTCAAT-GAAGTCGTGTTTGACTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
finalCons                     :   CATCAAGTTCAAT-GAAGTCGTGTTTGACTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT

lowQualScore                  :                2                                                      
lowQualScore                  :                .                                                      
lowQualScore                  :                2                                                      
consensus                     :   CATCAAGTTCAAT-GAAGTCGTGTTTGACTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
Reference ( family-496 )      :   CATCAAGTTCAAT-GAAGTCGTGTTTGACTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|1                          :   CATCAAGTTCAAT-GTAGTCGTGTTTGTCTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|10                         :     tCAAGTTCAAT-GAAGTCGTGTTTGACTTCACTAGAGAGGACACATAGGATATATTCAGGTGA
gi|11                         : tcgATCAAGTTCAAT-GACGTCGTGTTTGACTTCACTAGAGAGGACACATATGATATCTTCAGGTGAAAca
gi|12                         :   gATCAAGTTCAAT-GAAATCGTGTTTGACCTCACTAGAGAGGACACATATGATAACCTTGGGTGAAAT
gi|13                         :    ATCAAGTTCAAT-GAAATTGTGTTTAACTTCACTAGAGATGACACATAGGATATCTTCAGGTGAAA
gi|14                         :   CATCAAGTTCAAT-GAAGTCCTGTTT---TTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|15                         :   tATCAAGTTCAATAGAAGT---GTTTTACTTTACTAGAGAGGACACATAGGATATCTTCAG
gi|16                         :  aCATTAAGTCCAAT-GAAGTCGTAT-------CACTAGAGAGGACACAAAGGATAACTTCAGGTGAAGTaggta
gi|17                         :      tAAGTTCAAT-GAAATTGTGTTTGACTTCACTAGAG---------AGGATATCTTCAGGTCAAA
gi|18                         : acgATCAAGTTCAAT-GAATTT-TGTTTGACTTCACCAGTGAGGA
gi|2                          :   CATTAAGTTGAAT-GAAGTCGTGTTTGGCTTCACTAAAGAGGAAACATAGGATATCTTCTGGTGAAATa
gi|3                          :  tCATTAAGTTCAAT-GAAGTCGTCTTTGGCATCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|4                          :   tATCAAGTTCAAT-GAAGTCGCGTTTGACTCTACTAGAGAGGACACATAGGATATATTTAGGTGAAAT
gi|5                          :  tCATCAAGTTCAAT-GACGTCATGTTTGACTTCACTAGAGAGGACACATAGGATATCTTTAGGTGAAAT
gi|6                          :    ATCAAATTCAAT-GAAGTCGAGTTTGACTTCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|7                          :  tCATCAAGTTCAAT-GAAGTCGTGTTTGACTCCACTAGAGAGGACACATAGGATATCTTCAGGTGAAAT
gi|8                          :    ATCAAATTCAAT-GAAGTCGTGTTTGATTTCACTAGAGAGGACCCATAGGCTATCTTACGGTGAAAT
gi|9                          :  tCATCAAGTTCAAT-GAAGTGGTATTTGACTTCACTAGATAGGACACATAGGATATCTTCAGGTGAAA