lowQualScore : 1111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 222 1 1 1 11 1 4 3333333 22 1 222 2222222 1 1 22222 8888888888888888888888888888888888888888 11111111111 5555555555 11111 55555555555555555 1 222 4444444444444444444444444444444444 1 222 11 11 11 888888888888888888888888888888 11 1 111 333 7777777777777 111 1 111 333333333333 22222 333333 111 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1 1111 111 11 222222 1 222222 555555555555555555555555555555555555555555555555555555555555555555555555555555 11111 2222222222 111 22222
lowQualScore : 6 1 0 8 5 7 1 6 3 333 0 55 7 0 6 88 6 6 2 4 0 4 2 0 3 4444444 4 33 0 2 000 4444444 2 4 2 4 5 7 2 3 88888 4 7777777777777777777777777777777777777777 4 7 66666666666 0 0000000000 11111 99999999999999999 7 1 55 3 000 3 4444444444444444444444444444444444 3 9 4 7 6 7 444 6 6 6 7 55 99 88 44 4 999999999999999999999999999999 6 3 7 11 8 0 8 2 9 6 222 444 66 0 7777777777777 0 2 1 777 5 2 666 1 0 3 22 888888888888 55555 4 000000 444 0 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 6 99 0000 1 3 000 1 5 5 00 5 5 5 222222 9 2 5 0 888888 888888888888888888888888888888888888888888888888888888888888888888888888888888 1 5 66666 6 0000000000 111 1 66 0 9 55555 1 0 2 3
lowQualScore : . . . . . . . . . ... . .. . . . .. . . . . . . . . . ....... . .. . . ... ....... . . . . . . . . ..... . ........................................ . . ........... . .......... ..... ................. . . .. . ... . .................................. . . . . . . ... . . . . .. .. .. .. . .............................. . . . .. . . . . . . ... ... .. . ............. . . . ... . . ... . . . .. ............ ..... . ...... ... . ....................................................................................... . .. .... . . ... . . . .. . . . ...... . . . . ...... .............................................................................. . . ..... . .......... ... . .. . . ..... . . . .
lowQualScore : 0 0 7 3 0 3 0 0 7 333 5 00 0 5 0 00 0 0 5 0 5 0 5 0 0 0000000 0 00 5 5 555 0000000 5 0 5 0 0 0 5 0 55555 0 8888888888888888888888888888888888888888 0 0 00000000000 7 0000000000 33333 33333333333333333 0 0 00 0 555 0 0000000000000000000000000000000000 7 0 7 3 7 3 333 7 7 0 3 00 77 33 00 0 777777777777777777777777777777 5 5 0 22 3 7 3 3 0 7 333 333 22 2 5555555555555 2 5 2 555 0 2 000 0 8 2 44 444444444444 00000 0 222222 555 2 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 6 22 0000 0 7 000 4 7 0 77 7 0 0 222222 0 5 0 0 111111 111111111111111111111111111111111111111111111111111111111111111111111111111111 4 7 22222 7 8888888888 777 7 22 3 6 11111 9 7 1 7
consensus : CCGGTTGTCAAAGAATACAAACGTCTTAGATTAATCCGGAATAACAGACGGAAATCCCCTGCAAATGTAGACACGGTGCGT---CGAACCGCNCGNNGAACGNTGTTCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCCACCTTACCCGCTCAGACATGGTCACCGGCTTACTTGGGTTCACGTNATNAGAAGCATANANANACCTACAGAAGTTATC-TNCCTTGGTGCGCTATGCCGACNTAAAGCAACAGACGTTACGNTNCNNTTATTCCTNAGCCANACNTTACNAATGCNACAACAAGTGTANANAACGAGNAAAATGGCTTTANAAACGATATCCTACAAAGATTCAGAAAATACAANCTTGAACA-TACATCGAGCAAC-CATGTNATCAACCACGTTTCCTG-AAAAGAA-CACGAAAAGGTA-TTGT-AAAAAACAAT-ATAAACTTCGAAGAGCAGCA-T---GG--ATTACGAATAAACGCAGACGATGATTGCTTCCGGTTTCGAAGNNTCCACANTCGGCTNTCTCCNGGAATCGTTTGGCCCACTGCACTGGAGNACNCGTCTTCCATCGAATCCGTGACGTTCTTGGCCAAATTATGT--TGTGCANCAAAATCAAACCAAATAAAGAACTGTNTAACATGCGAGGCACA--ATATACAGATGAACTA-TTNCGTAA----------A-GTTTTTA----A----TTGTAGCNGTAATAA-ACTTCAATTCACGTGGGTAGAGTACTGGAATTNTCTCAATATTC---GTTTCCAAGTGACTTATGCTCA---T-TTCTACGAAACAGTACCAAANACATTCA---ACTACTATTCTTGCTTGGATATGTAGATACACTTTTATCTTCACTGTTAACATCAAAGCAAATCTCAGAATCTATGAACTTCAACGCTGCTTTCCTGAGAACA---------ATATGCGC-----TTGCTNATAAATGTATNTCTNNATGATTTACA-TT--TAAAGAACG--ATATA--TA-------------AAAGG-AAT-TAAAACTTG-ATACGATTTTGATA------TA------AACACATTAAA--CATT--TTCATGTTTCGTTTCGGTGAAA---TAACTT-AAATGTGNAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ANAACACGACAACANATTTAAATAATTTACTTT-A-ATTTACAA-ATAAAGACAATTATT--T----ATAT-C-----TACACCGATG---ATA--AAACCANT--GACTT---TATAAAN-AATAANTATT-ATTTTGTAATTCAT-AATG-TGAT-AATNG-TA---TTTATATTGTAATATTATTTGTGTAAAATTT-AAATGTTTGTAAAATCTCCAGANATGGAGGAATAAAAGTTGATAATAAT
Reference ( gi|1 ) : CCAGTCGTCAAAGAATACAAACATCTTGGAATAATCCAGAATAACAGACGGAACTCCCCTGCAAATGTAGATATGGTGCGT---CAAACTACGCGGGGATCGCTGTTCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCTACCCCATCTTACCCGCTCAGACATGGTCACCGGTTTACTTGGGTTTACGTCATTAGAAGCATACATAGACTTACAAAAGTTATCGTTCCTTGGTACGATTTGTAGACTTAAAGCAACAGACAATACGCTCCAGCTATTTCTCAA-TAGACTTTACCAATGCAAAAACATGTGTACAAAACG-AAACAATGGCTTTATAAACGATATCCTACAAATACTCAGAAAATACAAACTGGAACAATATATCGAGCAATTCATGTTATCAACAACATTTCCTGCAAAAGAACCATGGAAAAGTGTTTGTAAAAAAACAATAATAAACTTCGAAGAACAGCATT---GGTTATTACGAATTAACGCAAACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATAAACTATCTCCTGGAACAGTCTGGCTAACTGCATTAGAGAATCCGTCTTCCATCGAGTCCATGACATTCTTAGGCAAATTATGC--TGTGCAGCAAAACCAAACCAAATAAAGAACTGTTTAACATGCAAGGCACA--ATATACAGATGAACTG-TTTCATAA----------A-GTTTTTG----A----TTGTAGCAGTAATAA-ACATCAATCCACGAGGATGGCGTACTGGAACTCTCTCAATATTCA--GTTTCCAAGTGATTTATGCTCA---T-TTC-----AACAGTACCAAAGACATTCA---ATTACTATTCTTGATTGGATATGTAGATATACTTTTATCTTCACTGTTAACAGTAAAGCAAATCTCAGAATTTATGAACTTTAATGCTGCTTTCCTGAGATCA---------ATATACGC-----TTGTTAATAAATGCACGTCTATATGATTTACA-TG--TAGAGAATG--ATAT---TA-------------AAATG-AAT-TAAGACCTG-AAACAA----GATA------TA------CACACTTTAAA--CATT--TTCATGTTTCGTTTCGGTGAAA---TAACCT-AAATGTGCAT-ATAAA-TCAT-TCAAACTAGAGTCCT-ACAACAAGACAACAGATTTAAATAATTTACTTT-A-ATTCACGA-ATAAAGACAGTTATT--T----ATAT-C-----TACATCGATG---ATA--AAACCATA--GACTT---TGTAAAT-ATTAACTATT-ATTTTGTAATTCAC-AATG-TGAT-CATAG-TA---TTTATATTGTAATATTATATGTATAAAATCA-AAATGTTTGTAAAATCTCCAGAAATGGGGGAATAAAAGTTGATAATAAT
gi|14 : CCGGTTTCCAAAGAATACAAAGGTCTTGGAAAAATTCAGAGTAACAGACGACAATCCCCTACAAGTGTAGACACGTTTCGTTAGTAAACT
gi|2 : tCATTTGTCAATGAATACAAACATCTTAGATTAATCCAGAATAACAGACGGAAATCCCC-GCAAATGTAGACACGGTGGGT---CAAACTGCACATTGAACGTTGTTCTCGT
gi|3 : GTTGTCAAAGAATACAAACGTCTTAGTTTTATCCGGAATAACAGATGGAAATCCGCTGTAAATTTAGATACTGTGTGC---CGAACCACCCGGGGAACGGTGTTCTCGTtaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatattacctcaccttacccgctcagacatggttactggcttatttgggttcacgtcattagaagcatagaaatacttacagaagttatctgccttggtatgctatgccgacttaaaacaacagacgttacgttacatttattcctaagcatacattacaaatgctacaacaagtgtaaaaaacgaaaaaaatggctttataaacgatatcctacaaagattcagaaaatacaaacgttacaaaccacatttcctgaaaaagaaccacgaaaaggtattgtaaaaaacaataataaacttcaaagagcacgaataaacgcaagcgatgattgcttccggtttcaaaaaacgtcttccatcgaatctatgacattcttggcaaatatgttgtgcatcaaaatcaaaccaaataaagaactgtttgacatgcgaggtacaatatacagatgaactatttcgtaattgtttttaaagtagctgtagtaggcatcattccacgtggttgcgtactggaataacctcaatattccaagtgacatatgcttatttctaagaagcaatacaaaatacattcaataactattcttgcttggatttgtagatacactgctaacttaaatgtcaacattaatgcaaatctcagaagctatgaactgtaacgctgctttcatgagaacagtatacgcttgcttataaatgtatttcttaataatttacatttaaagactgttattttaagaaaataaaacttgaaaaaggtacgattttaatttatcacattaaagattttcatgtatctttttggtgaaataacttaaatgtggatataaatcattcaaactagagttttaaaacgagacaacatatttaaatagtttaccttaaa
gi|2 : TACCTCACCTTACCCGCTCAGACATGGTTACTGGCTTATTTGGGTTCACGTCATTAGAAGCATAGAAATACTTACAGAAGTTATC-TGCCTTGGTATGCTATGCCGACTTAAAACAACAGACGTTACGTTACATTTATTCCTAAG-CATACATTACAAATGCTACAACAAGTGTAAAAAACGAAAAAAATGGCTTTATAAACGATATCCTACAAAGATTCAGAAAATACAAAC-------------------------GTTACAAACCACATTTCCTGAAAAAGAACCACGAAAAGGTA-TTGT-AAAAAACAATAATAAACTTCAAAGAGC----------------ACGAATAAACGCAAGCGATGATTGCTTCCGGTTTCAAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttatccccaccttacccattcagacagtcaccggcttacttgggttcacatgataagaagcatatatagatctacaaaagttatcttccttggtgcgctatactgacataaagcaacagatgttacggtcctattattcttaactagactttaccaatgcaacaacaagtgtacacaacggtaaaatggctttaaaaacgatatcctacaaaaacaatcttgaacagtacatcgaataatgcatatcatcaagcacatttcctgcaaaagaaatatggaaaagtatttgtaaaaaacaattataaacttcgaagagcaacaatggtcattacgaataaacgcagacgataactgctttcggtttcgaagctttcacaatcagctatcttgggaactcgtcttccattgaatccatgactttcttggccaaattatgtcatgtgcaccaaaatcaaacca
gi|3 : catttgtcaatgaatacaaacatcttagattaatccagaataacagacggaaatccccgcaaatgtagacacggtgggtcaaactgcacattgaacgttgttctcgttaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatatCCCCACCTTACCCATTCAGACA--GTCACCGGCTTACTTGGGTTCACATGATAAGAAGCATATATAGATCTACAAAAGTTATC-TTCCTTGGTGCGCTATACTGACATAAAGCAACAGATGTTACGGTCCTATTATT-CTTAACTAGACTTTACCAATGCAACAACAAGTGTACACAACG-GTAAAATGGCTTTAAAAACGATATCCTACAAA-A----------ACAATCTTGAACAGTACATCGAATAATGCATATCATCAAGCACATTTCCTGCAAAAGAAATATGGAAAAGTATTTGT-AAAAAACAATTATAAACTTCGAAGAGCAACAAT---GGTCATTACGAATAAACGCAGACGATAACTGCTTTCGGTTTCGAAGCTTTCACAATCAGCTATCT--TGG------------------------GAACTCGTCTTCCATTGAATCCATGACTTTCTTGGCCAAATTATGTCATGTGCACCAAAATCAAACCAaaacgtcttccatcgaatctatgacattcttggcaaatatgttgtgcatcaaaatcaaaccaaataaagaactgtttgacatgcgaggtacaatatacagatgaactatttcgtaattgtttttaaagtagctgtagtaggcatcattccacgtggttgcgtactggaataacctcaatattccaagtgacatatgcttatttctaagaagcaatacaaaatacattcaataactattcttgcttggatttgtagatacactgctaacttaaatgtcaacattaatgcaaatctcagaagctatgaactgtaacgctgctttcatgagaacagtatacgcttgcttataaatgtatttcttaataatttacatttaaagactgttattttaagaaaataaaacttgaaaaaggtacgattttaatttatcacattaaagattttcatgtatctttttggtgaaataacttaaatgtggatataaatcattcaaactagagttttaaaacgagacaacatatttaaatagtttaccttaaa
gi|8 : gttgtcaaagaatacaaacgtcttagttttatccggaataacagatggaaatccgctgtaaatttagatactgtgtgccgaaccacccggggaacggtgttctcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttatAACATTACATTGAGCAACTCATGTGTTCAACAACGTTTTCT------------TGAAAA--------CAAAAAAA-----ATACATTTCGAA---CAGCATTAATGGGAATTACGAATACGCGCAGACGCTGATTGCTTCCGGTTTTGAAGGGTCTACACTTGGCTCTCTCCGGGAATCGTTTGGCCCACTGCACTGGAGTACACGTCTTCCATAGACTTCGTGACGTTCTTGGCCATATTATGT--TGTA-AGCAAAATC----------AAGAACTGTGTAACATGTCAGGCACA--ATATACATATGAACTG-TTCCATAAAGTCAAATGTA-GTTTTTGTGCTG----TTGCA-CAGTAATAA-A
gi|2 : tCGTCTTCCATCGAATCTATGACATTCTT-GGCAAAT-ATGT--TGTGCATCAAAATCAAACCAAATAAAGAACTGTTTGACATGCGAGGTACA--ATATACAGATGAACTA-TTTCGTAA----------TTGTTTTTA----A----A-GTAGCTGTAGTAG-GCATCATTCCACGTGG-TTGCGTACTGGAATAACCTCAATATTC--------CAAGTGACATATGCTTA---T-TTCTAAGAAGCAATACAAAATACATTCA---ATAACTATTCTTGCTTGGATTTGTAGATACACTGCTAACTTAAATGTCAACATTAATGCAAATCTCAGAAGCTATGAACTGTAACGCTGCTTTCATGAGAACA---------GTATACGC-----TTGCTTATAAATGTATTTCTTAATAATTTACA-TT--TAAAGACTG--TTAT---TT-------------TAAGA-AAA-TAAAACTTG-AAA-AA----GGTACGATTTTAATTTATCACA--TTAAA--GATT--TTCATGTATCTTTTTGGTGAAA---TAACTT-AAATGTGGAT-ATAAA-TCAT-TCAAACTAGAGTTTT-AAAACGAGACAACATATTTAAATAGTTTACCTT-A-A
gi|11 : catttgtcaatgaatacaaacatcttagattaatccagaataacagacggaaatccccgcaaatgtagacacggtgggtcaaactgcacattgaacgttgttctcgttaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatattacctcaccttacccgctcagacatggttactggcttatttgggttcacgtcattagaagcatagaaatacttacagaagttatctgccttggtatgctatgccgacttaaaacaacagacgttacgttacatttattcctaagcatacattacaaatgctacaacaagtgtaaaaaacgaaaaaaatggctttataaacgatatcctacaaagattcagaaaatacaaacgttacaaaccacatttcctgaaaaagaaccacgaaaaggtattgtaaaaaacaataataaacttcaaagagcacgaataaacgcaagcgatgattgcttccggtttcaaaaaaAAATAATAAAATGTA-AACATGTGAGGCACACTATATACAGATGAAAAAATTGAATGT----------A-GTTGTCA----AAAACTTGTCACCATA-TAAGACTGTAATTCACGTGGGTAGAGAACTGGACTTGTCTGAATATTTTTTGTTTCCAGGTGATTTATAATTAAACTATGC-----AACAGTACCAAATACATTCA---GCTACTATTa
gi|5 : GTAGCAGCAATAT-ACTTCAATTCACGAGGATAGAATACTGCAACTTTCTCAATATTCA--GTTTCCAAGTGAACTGTGTTCA---T-TTCTACAAAATAAAACCAAAGACAATCA---ATTATTATTCTTACTTGGATATGTGGATACAATTTCATCGTCACTGCCAACATCCAAGTAAATCTCA--------GAACTTCAACGAGGCTTTCCTGAGAACA---------ACATGCGCATGTTTTGTGTTTAAA-----GTCTGT-TTATTTTTA------AGATAACGGAACATA--CA-------------ACAAG-AATGT--GACTTT-----------GATA------TA------GACACATTAAAACCGTTGCCGCATGTTTCGTTTCGTGGAAA---TGCCCT-AAAGATGTTT-ATAAA-TCAT-TCAAACTAGATTTTT-AGAAAACGACAATATATTTAAATAATTTACTTT-ATATT-AC------AAGAC-----TT--T----ATAT-T-----T------------------------------TT---TATAAAT-CTTA----------TTGTGAT-----AATT-T------TA---A---TT-ATAT--TAATATTGAA---ATAAAA-CATAAATGTTTGTATACTCTACAGAAATGGAGGAATAATAGTTGATt
gi|4 : aTTCTAACGGACTTATGCTCG---T-GTCTACGAAACGGTATTAAAGACGCTCAGGTACTACTATTCTTGCTTGGGTATGTAGATATACTTTTATCTTCACTGTTAACATTAAAGTAAATCTCAGAATTCATGAACTTTAATGCTGCTTTCCTGAAAACT---------ATATGCGT-----TTGCTAATAAATGTATTTCTAGATGATTTACA-TT--TAAAGAA-A--ATCA---AA-------------AAAGG-AA--CAA----TG-ATACGATTTTGATA------GA------AACACATTTAA--CA-T--TTCATGTTTCGTTTCTGCTAAA---TAACTT-AAATGTGCAT-ATAAA-TCAT-TCAAACTAGAGTTTT----ACAAGACAACATCTTTAAATAATTTACTTA-A-ATTTTCAA-ATAAAGACAAGTAAT--A----ATAT-TTGCAGTACACCGATG---ATA--AAACCAAT--GACTA---TGTAAACGAATAATTATT-ATTTTGTAATTCAG-AATG-TGAT-AATTG-TA---TTTATATTGTAATATTATTTGTATAAAATTT-AAATGTTTATACAATAT-CAGAAATGGAGGAGTAAAA
gi|15 : TACATACACTTTTATCTTCACTGTTAACATCAACGCAA-TTTCTAAATTTATAATCTTCAATGCTGCTTTCCTGAGAATA---------ATATtg
gi|6 : TGCTAATATCTAAGCAAATCTCAGAATCTATCAACTTCATTGTTGTTTTCATAAGAACATAATTTATTATATACGC-----TTTTTAACAAAT--ATGTGTTTATGGTTTATACTAATTGAAGAATA--ATATAAGTACTGATGTTGAACGAAACGAAAT-TGAAACATGTATATGATTTTAATA------TA------AACACATTAAA--TATT--TTCATA-------TCCGTGAAATATTAACCT-AAATG---ATAATTAA-TTTTATCAAACTAGAATTTA-ACACCACGACATTAGTCTTAACTTATAGACGTTAA-ATTCA--ATATAAATATACTAATG--T----ATAT-T-----AACACTGATG---CT-----ACCGTATCAACT--------GAT-GATAACCATTGATTTTATAAtc
gi|7 : ATA------TA------AACACATAAAA--CAC--------GTTTAGTTTCAGTGAAA---TTACTT-AAATGTGAAT-ATAAA-TCAT-TCACACTAGAGTTG--GCAACACGTCAACAGATTTAAATAATTTACTTT-A-ATTTATAA-GTAAAGACAATTATTATT----ATTTGCAG---TACACCGGTG---ATA--AAACCATT--GACTT---TTTAAAA-AACAA-TATT-ATTTTGTAACTCCT-AATG-TGAT-AATTA-TA---TCTATATTGTGATATCATTTGTATAAAATAC-AAATATTTGTTTAATCTCCAGTTATGGGAGAATAAagaaaaggttat
gi|9 : gcacacgattgctatttattaaatctatttctgaaaggtaatctatcggcatagaagaactcttcaaaacgatttta--CATT--TTCATGTTTTGTTTCAGTGAAA---TGACTTAAAATG-GTTT-ATAAG-TCAT-TCAAACTAAAGTTTTGAAAAC-CGACACTATATTTGAATAATTTACTTT-ATATT-ACAA-ATAAAG------ATT--T----ACAT-C-----TGTA---ATACACATA--TAACCAGA--GAATT---TATAAA-----AAATATT-GTTTTATGATTTAT-ATTG-TGAT-AATTG-TA---TTTATATT------TTATATGTGTAAAATTT-AAATGCTTGTAAAATGTCTAGAAATAGAGTATTAAAAGTTGA
gi|10 : GAAA---TAACTT-AGATGTGGCT-ATAAAATCAT-TCGAACTAGAGAATT-ACGACACGACAACGGATTTAAATAGTTTACTTT-A-ATTTAC------AAG-----TATT--T----GCA--C-----TACACCGATG---ATT--AAACCATT--GACGT---T-TAAA
gi|12 : -TCAT-TCAAACTAAAGTCTT-AGAAGACGTCTATAGATTTAGATAATTTACTTT-A-TGTTACAA-ATAAAGACAATTATT--TACAAATATAG-----TACATAGATATTCATATTGAACTAC-----CTTTTGTGTAAAA-CTTAAATA-----CTTGTAATaaaaaagaagtaatcttcttctttttttcttcttcttctgattgtaattattgttattaaaattatgttgttataagcaaattacctttctatataa
gi|12 : atgtT---TACAAAT-AAAGACAATT-ATTT--------ACAAATA-TAGTACATAGATA---TTCATATTGAACTACCTTTTGTGTAAAACTT-AAATACTTGTAATATCTCCGGATATGGAGGAATACAATTTTATAATAatctccggatatggaggaatacaattttataata
gi|13 : atgttcattcaaactaaagtcttagaagacgtctatagatttagataatttactttatgGTAATTCAT-AACGATAAA-TGTAT-TAATTTCTATAGTGAAATAGAATTTATGTAAATTCT-TAATGTTTGTAAAATCTCCAAATATGGAGGAATAAAAGATGATAATAA
gi|16 : ATTTGAATAAA--TG-AAATCTCTG--AAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAATcaataatccat
Alignments
lowQualScore : 1 1 222 222 111 222 33 1 3 2222222222222222222222 222222222 666666666666 1111111111 111 11 11 1 1 222222 11 111 22 11 111 222222222 111 111 7777777777777777777777777777777777777777777777777777 1111 555555555555555555555555555555 22222222 111111
lowQualScore : 4 2 3 0 0 11 1 22 1 7 1 1 1 1 1 0 0 3 1 0 3 1 1 1 22 2 1 444 1 1 1 1 1 1 000 1 555 1 6 111 33 00 44 0 88 2 2 0 0 6666666666666666666666 444444444 777777777777 22 1 44 1 5555555555 777 666 1 1 0 0 2 4 2 3 33 2 1 3 44 0 33 0 1 2 0 3 3 888888 1 7 11 4 4 4 7 3 1 777 22 1 3 11 0 3 0 1 444 1 2 0 666666666 11 5 1 22 444 3 444 8 5555555555555555555555555555555555555555555555555555 1 77 0 77 1 888 5 3 33 5 4 4 4 1 11 1 3 0 5 0 0 1111 66 111111111111111111111111111111 0 5 44 5 11111111 1 3 3 3 5 1 5 666666 5 1 2 0 1 0 1 0 1
lowQualScore : . . . . . .. . .. . . . . . . . . . . . . . . . . .. . . ... . . . . . . ... . ... . . ... .. .. .. . .. . . . . ...................... ......... ............ .. . .. . .......... ... ... . . . . . . . . .. . . . .. . .. . . . . . . ...... . . .. . . . . . . ... .. . . .. . . . . ... . . . ......... .. . . .. ... . ... . .................................................... . .. . .. . ... . . .. . . . . . .. . . . . . . .... .. .............................. . . .. . ........ . . . . . . . ...... . . . . . . . . .
lowQualScore : 0 0 2 2 7 33 0 00 0 3 0 0 0 0 0 7 7 3 0 7 7 0 0 0 00 0 0 777 0 0 0 0 0 0 333 0 000 0 7 000 55 55 22 2 00 5 0 0 0 0000000000000000000000 555555555 888888888888 00 0 33 0 0000000000 000 333 0 0 2 8 0 2 5 2 88 5 0 2 22 2 88 0 0 0 0 2 0 555555 0 0 22 0 0 2 0 0 0 555 55 4 2 00 8 2 6 0 000 0 2 7 777777777 88 0 0 00 000 8 000 0 4444444444444444444444444444444444444444444444444444 7 99 1 99 7 888 0 2 22 0 4 4 4 0 99 0 8 4 0 1 1 2222 99 444444444444444444444444444444 3 7 99 7 22222222 4 6 6 0 7 0 7 444444 6 4 4 5 1 4 2 5 0
consensus : CCGGTTGTCAAAGAATACAAACGTCTTGGANTAATCCAGAATAACAGACGGAAATCCCCTGCAAATGTAGACACGGTGCGTCGAACTACGCGGGGAACGNTGTTCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCCACCTTACCCGCTCAGACATGGTCACCGGCTTACTTGGGTTCACGTCATTAGAAGCATANATAGACTTACAAAAGTTATC-TTCCTTGGTACGCTATGCCGACTTAAAGCAACAGACGTTACGNTCCANTTATTCCTNAACCAGACTTTACCAATGCAACAACAAGTGTACAAAACGAGAAAAATGGCTTTATAAACGATATCCTACAAANACTCAGAAAATACAAACTTGAACAGT-ACATCGAGCAATTCATGTNATCAACNACATTTCCT-GCAAAAG-AA-C-ACGGAAAAGTA-TT-GTAAAAAA-CAA-T-A-TAAACTTCGAAGAGCANC-A-T-GGTNATTACGAATAAACGCAGACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATCGGCTATCTCC-GGAAC-GTTTGGCC-ACTGCACTGGAGAACNCGTCTTCCATCGAATCCATGACGTTCTTGGCCAAATTATGT--TGTGCANCAAAATCAAACCAAATAAAGAACTGTNTAACATGCGAGGCACA--ATATACAGATGAACTG-TTTCATAAA-GTTTTCAA----NTGTAGCNGTAATAA-ACNTCAATCCACGNGGATAGCGTACTGGAACTNTCTCAATA---TTCAGTTTCCAAGTGACTTATGCTCATT--TCTACGAAACAGTACCAAAGACATTCA---ATTACTATTCTTGCTTGGATATGTAGATACACTTTTATCTTCACTGTTAACATCAAAGCAAATCTCAGAATTTATGAACTTCAACGCTGCTTTCCTGAGAACA---------ATATACGCTTGTTAATAAATGTATGTCTANA---TGATTTACATT---TAA-AGAATG--ATATA--TA-------------AAA-GGAATTAAAAC-TG-A------TACGATTTTGATATAAACACATTAAA--CATT--TTCATGTTTCGTTTCGGTGAAA---TAACTT-AAATGTGNAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ACAACACGACAACAGATTTAAATAATTTACTTTAANTTACAA-ATAAAGACAATTATT--TATAT-C-G---TACACCGA---------------TGATAA-AACCATTGAC-TTTATAAA-NAA-AACTATTATTTTGTAATTCATAATGTGATA-ATTG-TATT------TATATTGNAATATTATTTGTGTAAAATTTAAATGTTTGTAAAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAAT
Reference ( family-1139 ) : CCGGTTGTCAAAGAATACAAACGTCTTAGATTAATCCGGAATAACAGACGGAAATCCCCTGCAAATGTAGACACGGTGCGTCGAACCGCNCGNNGAACGNTGTTCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCCACCTTACCCGCTCAGACATGGTCACCGGCTTACTTGGGTTCACGTNATNAGAAGCATANANANACCTACAGAAGTTATC-TNCCTTGGTGCGCTATGCCGACNTAAAGCAACAGACGTTACGNTNCNNTTATTCCTNAGCCANACNTTACNAATGCNACAACAAGTGTANANAACGAGNAAAATGGCTTTANAAACGATATCCTACAAAGATTCAGAAAATACAANCTTGAACA-T-ACATCGAGCAAC-CATGTNATCAACCACGTTTCCT-G-AAAAG-AA-C-ACGAAAAGGTA-TT-GTAAAAAA-CAA-T-A-TAAACTTCGAAGAGCAGC-A-T-GG--ATTACGAATAAACGCAGACGATGATTGCTTCCGGTTTCGAAGNNTCCACANTCGGCTNTCTCCNGGAATCGTTTGGCCCACTGCACTGGAGNACNCGTCTTCCATCGAATCCGTGACGTTCTTGGCCAAATTATGT--TGTGCANCAAAATCAAACCAAATAAAGAACTGTNTAACATGCGAGGCACA--ATATACAGATGAACTA-TTNCGTAAA-GTTTTTAA----TTGTAGCNGTAATAA-ACTTCAATTCACGTGGGTAGAGTACTGGAATTNTCTCAATA---TTC-GTTTCCAAGTGACTTATGCTCATT--TCTACGAAACAGTACCAAANACATTCA---ACTACTATTCTTGCTTGGATATGTAGATACACTTTTATCTTCACTGTTAACATCAAAGCAAATCTCAGAATCTATGAACTTCAACGCTGCTTTCCTGAGAACA---------ATATGCGCTTGCTNATAAATGTATNTCTNNA---TGATTTACATT---TAA-AGAACG--ATATA--TA-------------AAA-GGAATTAAAACTTG-A------TACGATTTTGATATAAACACATTAAA--CATT--TTCATGTTTCGTTTCGGTGAAA---TAACTT-AAATGTGNAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ANAACACGACAACANATTTAAATAATTTACTTTAATTTACAA-ATAAAGACAATTATT--TATAT-C-----TACACCGA---------------TGATAA-AACCANTGAC-TTTATAAA-NAATAANTATTATTTTGTAATTCATAATGTGATA-ATNG-TATT------TATATTGTAATATTATTTGTGTAAAATTTAAATGTTTGTAAAATCTCCAGANATGGAGGAATAAAAGTTGATAATAAT
gi|1 : CCAGTCGTCAAAGAATACAAACATCTTGGAATAATCCAGAATAACAGACGGAACTCCCCTGCAAATGTAGATATGGTGCGTCAAACTACGCGGGGATCGCTGTTCTCGT
gi|1 : TACCCCATCTTACCCGCTCAGACATGGTCACCGGTTTACTTGGGTTTACGTCATTAGAAGCATACATAGACTTACAAAAGTTATCGTTCCTTGGTACGATTTGTAGACTTAAAGCAACAGACAATACGCTCCAGCTATTTCTCAAT-AGACTTTACCAATGCAAAAACATGTGTACAAAACGA-AACAATGGCTTTATAAACGATATCCTACAAATACTCAGAAAATACAAACTGGAACAAT-ATATCGAGCAATTCATGTTATCAACAACATTTCCT-GCAAAAG-AA-CCATGGAAAAGTG-TTTGTAAAAAAACAA-T-AATAAACTTCGAAGAACAGC-A-TTGGTTATTACGAATTAACGCAAACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATAAACTATCTCCTGGAACAGTCTGGCTAACTGCATTAGAGAATCCGTCTTCCATCGAGTCCATGACATTCTTAGGCAAATTATGC--TGTGCAGCAAAACCAAACCAAATAAAGAACTGTTTAACATGCAAGGCACA--ATATACAGATGAACTG-TTTCATAAA-GTTTTTGA----TTGTAGCAGTAATAA-ACATCAATCCACGAGGATGGCGTACTGGAACTCTCTCAATA---TTCAGTTTCCAAGTGATTTATGCTCATT--TC-----AACAGTACCAAAGACATTCA---ATTACTATTCTTGATTGGATATGTAGATATACTTTTATCTTCACTGTTAACAGTAAAGCAAATCTCAGAATTTATGAACTTTAATGCTGCTTTCCTGAGATCA---------ATATACGCTTGTTAATAAATGCACGTCTATA---TGATTTACATG---TAG-AGAATG--ATAT---TA-------------AAA-TGAATTAAGACCTG-A------AACAA----GATATACACACTTTAAA--CATT--TTCATGTTTCGTTTCGGTGAAA---TAACCT-AAATGTGCAT-ATAAA-TCAT-TCAAACTAGAGTCCT-ACAACAAGACAACAGATTTAAATAATTTACTTTAATTCACGA-ATAAAGACAGTTATT--TATAT-C-----TACATCGA---------------TGATAA-AACCATAGAC-TTTGTAAA-TATTAACTATTATTTTGTAATTCACAATGTGATC-ATAG-TATT------TATATTGTAATATTATATGTATAAAATCAAAATGTTTGTAAAATCTCCAGAAATGGGGGAATAAAAGTTGATAATAATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacctaccccatcttacccgctcagacatggtcaccggtttacttgggtttacgtcattagaagcatacatagacttacaaaagttatcgttccttggtacgatttgtagacttaaagcaacagacaatacgctccagctatttctcaatagactttaccaatgcaaaaacatgtgtacaaaacgaaacaatggctttataaacgatatcctacaaatactcagaaaatacaaactggaacaatatatcgagcaattcatgttatcaacaacatttcctgcaaaagaaccatggaaaagtgtttgtaaaaaaacaataataaacttcgaagaacagcattggttattacgaattaacgcaaacgatgattgcttccggtttcgaagggtccacaataaactatctcctggaacagtctggctaactgcattagagaatccgtcttccatcgagtccatgacattcttaggcaaattatgctgtgcagcaaaaccaaaccaaataaagaactgtttaacatgcaaggcacaatatacagatgaactgtttcataaagtttttgattgtagcagtaataaacatcaatccacgaggatggcgtactggaactctctcaatattcagtttccaagtgatttatgctcatttcaacagtaccaaagacattcaattactattcttgattggatatgtagatatacttttatcttcactgttaacagtaaagcaaatctcagaatttatgaactttaatgctgctttcctgagatcaatatacgcttgttaataaatgcacgtctatatgatttacatgtagagaatgatattaaaatgaattaagacctgaaacaagatatacacactttaaacattttcatgtttcgtttcggtgaaataacctaaatgtgcatataaatcattcaaactagagtcctacaacaagacaacagatttaaataatttactttaattcacgaataaagacagttatttatatctacatcgatgataaaaccatagactttgtaaatattaactattattttgtaattcacaatgtgatcatagtatttatattgtaatattatatgtataaaatcaaaatgtttgtaaaatctccagaaatgggggaataaaagttgataataat
gi|10 : ccagtcgtcaaagaatacaaacatcttggaataatccagaataacagacggaactcccctgcaaatgtagatatggtgcgtcaaactacgcggggatcgctgttctcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaccGAAA---TAACTT-AGATGTGGCT-ATAAAATCAT-TCGAACTAGAGAATT-ACGACACGACAACGGATTTAAATAGTTTACTTTAATTTACAA-G----------TATT--TGCA--C-----TACACCGA---------------TGATTA-AACCATTGACGTTTAAAAA-AAA
gi|11 : AAATAATAAAATGTA-AACATGTGAGGCACACTATATACAGATGAAAAAATTGAATGTA-GTTGTCAAAAACTTGTCACCATA-TAAGACTGTAATTCACGTGGGTAGAGAACTGGACTTGTCTGAATATTTTTT-GTTTCCAGGTGATTTATA---ATTAAACTATGCAACAGTACCAAATACATTCA---GCTACTATTagaagtaatcttcttctttttttcttcttcttctgattgtaattattgttattaaaattatgttgttataagcaaattacctttctatataa
gi|12 : -TCAT-TCAAACTAAAGTCTT-AGAAGACGTCTATAGATTTAGATAATTTACTTTATGTTACAA-ATAAAGACAATTATT--TACAt
gi|12 : atgtTTACAAA-TAAAGACAATTATTT----A--CA-AATATAGTACATAGATATT------CATATTGAACTACCTTTTGTGTAAAACTTAAATACTTGTAATATCTCCGGATATGGAGGAATACAATTTTATAATAaatatagtacatagatattcatattgaactaccttttgtgtaaaacttaaatacttgtaatatctccggatatggaggaatacaattttataata
gi|13 : atgttcattcaaactaaagtcttagaagacgtctatagatttagataatttactttatgGTAATTCATAACG--ATA-AATG-TATTAATTTCTATAGTGAAATAGAATTTATGTAAATTCTTAATGTTTGTAAAATCTCCAAATATGGAGGAATAAAAGATGATAATAA
gi|14 : CCGGTTTCCAAAGAATACAAAGGTCTTGGAAAAATTCAGAGTAACAGACGACAATCCCCTACAAGTGTAGACACGTTTCGTcaataatccat
gi|15 : tTACATACACTTTTATCTTCACTGTTAACATCAACGC-AATTTCTAAATTTATAATCTTCAATGCTGCTTTCCTGAGAATA---------ATATtagtaaact
gi|16 : ATTTGAATAAA--TGAAATCTCTG--AAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAATtc
gi|2 : TTGTCAATGAATACAAACATCTTAGATTAATCCAGAATAACAGACGGAAATCCCC-GCAAATGTAGACACGGTGGGTCAAACTGCACATTGAACGTTGTTCTCGTat
gi|2 : catTACCTCACCTTACCCGCTCAGACATGGTTACTGGCTTATTTGGGTTCACGTCATTAGAAGCATAGAAATACTTACAGAAGTTATC-TGCCTTGGTATGCTATGCCGACTTAAAACAACAGACGTTACGTTACATTTATTCCTAAG-CATACATTACAAATGCTACAACAAGTGTAAAAAACGAAAAAAATGGCTTTATAAACGATATCCTACAAAGATTCAGAAAATACAAACGT------T-ACA-------------------AACCACATTTCCT-GAAAAAG-AACC-ACGAAAAGGTA-TT-GTAAAAAA-CAA-TAA-TAAACTTCAAAGAGC---------------ACGAATAAACGCAAGCGATGATTGCTTCCGGTTTCAAAtaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatattacctcaccttacccgctcagacatggttactggcttatttgggttcacgtcattagaagcatagaaatacttacagaagttatctgccttggtatgctatgccgacttaaaacaacagacgttacgttacatttattcctaagcatacattacaaatgctacaacaagtgtaaaaaacgaaaaaaatggctttataaacgatatcctacaaagattcagaaaatacaaacgttacaaaccacatttcctgaaaaagaaccacgaaaaggtattgtaaaaaacaataataaacttcaaagagcacgaataaacgcaagcgatgattgcttccggtttcaaaaaacgtcttccatcgaatctatgacattcttggcaaatatgttgtgcatcaaaatcaaaccaaataaagaactgtttgacatgcgaggtacaatatacagatgaactatttcgtaattgtttttaaagtagctgtagtaggcatcattccacgtggttgcgtactggaataacctcaatattccaagtgacatatgcttatttctaagaagcaatacaaaatacattcaataactattcttgcttggatttgtagatacactgctaacttaaatgtcaacattaatgcaaatctcagaagctatgaactgtaacgctgctttcatgagaacagtatacgcttgcttataaatgtatttcttaataatttacatttaaagactgttattttaagaaaataaaacttgaaaaaggtacgattttaatttatcacattaaagattttcatgtatctttttggtgaaataacttaaatgtggatataaatcattcaaactagagttttaaaacgagacaacatatttaaatagtttaccttaaa
gi|2 : catttgtcaatgaatacaaacatcttagattaatccagaataacagacggaaatccccgcaaatgtagacacggtgggtcaaactgcacattgaacgttgttctcgttaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatatCGTCTTCCATCGAATCTATGACATTCTTGGC-AAAT-ATGT--TGTGCATCAAAATCAAACCAAATAAAGAACTGTTTGACATGCGAGGTACA--ATATACAGATGAACTA-TTTCGTAATTGTTTTTAA----A-GTAGCTGTAGTAG-GCATCATTCCACGTGGTT-GCGTACTGGAATAACCTCAATA---TTC------CAAGTGACATATGCTTATT--TCTAAGAAGCAATACAAAATACATTCA---ATAACTATTCTTGCTTGGATTTGTAGATACACTGCTAACTTAAATGTCAACATTAATGCAAATCTCAGAAGCTATGAACTGTAACGCTGCTTTCATGAGAACA---------GTATACGCTTGCTTATAAATGTATTTCTTAA---TAATTTACATT---TAA-AGACTG--TTAT---TT-------------TAA-GAAAATAAAACTTG-AAAAAGGTACGATTTTAAT-TTATCACATTAAA--GATT--TTCATGTATCTTTTTGGTGAAA---TAACTT-AAATGTGGAT-ATAAA-TCAT-TCAAACTAGAGTTTT-AAAACGAGACAACATATTTAAATAGTTTACCTTAAaaacgtcttccatcgaatctatgacattcttggcaaatatgttgtgcatcaaaatcaaaccaaataaagaactgtttgacatgcgaggtacaatatacagatgaactatttcgtaattgtttttaaagtagctgtagtaggcatcattccacgtggttgcgtactggaataacctcaatattccaagtgacatatgcttatttctaagaagcaatacaaaatacattcaataactattcttgcttggatttgtagatacactgctaacttaaatgtcaacattaatgcaaatctcagaagctatgaactgtaacgctgctttcatgagaacagtatacgcttgcttataaatgtatttcttaataatttacatttaaagactgttattttaagaaaataaaacttgaaaaaggtacgattttaatttatcacattaaagattttcatgtatctttttggtgaaataacttaaatgtggatataaatcattcaaactagagttttaaaacgagacaacatatttaaatagtttaccttaaa
gi|3 : catttgtcaatgaatacaaacatcttagattaatccagaataacagacggaaatccccgcaaatgtagacacggtgggtcaaactgcacattgaacgttgttctcgttaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatattacctcaccttacccgctcagacatggttactggcttatttgggttcacgtcattagaagcatagaaatacttacagaagttatctgccttggtatgctatgccgacttaaaacaacagacgttacgttacatttattcctaagcatacattacaaatgctacaacaagtgtaaaaaacgaaaaaaatggctttataaacgatatcctacaaagattcagaaaatacaaacgttacaaaccacatttcctgaaaaagaaccacgaaaaggtattgtaaaaaacaataataaacttcaaagagcacgaataaacgcaagcgatgattgcttccggtttcaaaaaaGTTGTCAAAGAATACAAACGTCTTAGTTTTATCCGGAATAACAGATGGAAATCCGCTGTAAATTTAGATACTGTGTGCCGAACCACCCGGGGAACGGTGTTCTCGTa
gi|3 : CCCCACCTTACCCATTCAGACA--GTCACCGGCTTACTTGGGTTCACATGATAAGAAGCATATATAGATCTACAAAAGTTATC-TTCCTTGGTGCGCTATACTGACATAAAGCAACAGATGTTACGGTCCTATTATT-CTTAACTAGACTTTACCAATGCAACAACAAGTGTACACAACG-GTAAAATGGCTTTAAAAACGATATCCTACAAAA-----------ACAATCTTGAACAGT-ACATCGAATAATGCATATCATCAAGCACATTTCCT-GCAAAAGAAA-T-ATGGAAAAGTATTT-GTAAAAAA-CAATT-A-TAAACTTCGAAGAGCAACAA-T-GGTCATTACGAATAAACGCAGACGATAACTGCTTTCGGTTTCGAAGCTTTCACAATCAGCTATC------------TTGG--------------GAACTCGTCTTCCATTGAATCCATGACTTTCTTGGCCAAATTATGTCATGTGCACCAAAATCAAACCAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttatccccaccttacccattcagacagtcaccggcttacttgggttcacatgataagaagcatatatagatctacaaaagttatcttccttggtgcgctatactgacataaagcaacagatgttacggtcctattattcttaactagactttaccaatgcaacaacaagtgtacacaacggtaaaatggctttaaaaacgatatcctacaaaaacaatcttgaacagtacatcgaataatgcatatcatcaagcacatttcctgcaaaagaaatatggaaaagtatttgtaaaaaacaattataaacttcgaagagcaacaatggtcattacgaataaacgcagacgataactgctttcggtttcgaagctttcacaatcagctatcttgggaactcgtcttccattgaatccatgactttcttggccaaattatgtcatgtgcaccaaaatcaaacca
gi|4 : gttgtcaaagaatacaaacgtcttagttttatccggaataacagatggaaatccgctgtaaatttagatactgtgtgccgaaccacccggggaacggtgttctcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttatTTCTAACGGACTTATGCTCGTG--TCTACGAAACGGTATTAAAGACGCTCAGGTACTACTATTCTTGCTTGGGTATGTAGATATACTTTTATCTTCACTGTTAACATTAAAGTAAATCTCAGAATTCATGAACTTTAATGCTGCTTTCCTGAAAACT---------ATATGCGTTTGCTAATAAATGTATTTCTAGA---TGATTTACATT---TAA-AGAA-A--AT-CA--AA-------------AAA-GGAA-CAA----TG-A------TACGATTTTGATAGAAACACATTTAA--CA-T--TTCATGTTTCGTTTCTGCTAAA---TAACTT-AAATGTGCAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ACAA---GACAACATCTTTAAATAATTTACTTAAATTTTCAA-ATAAAGACAAGTAAT--AATAT-TTGCAGTACACCGA---------------TGATAA-AACCAATGAC-TATGTAAACGAATAATTATTATTTTGTAATTCAGAATGTGATA-ATTG-TATT------TATATTGTAATATTATTTGTATAAAATTTAAATGTTTATACAATAT-CAGAAATGGAGGAGTAAAA
gi|5 : GTAGCAGCAATAT-ACTTCAATTCACGAGGATAGAATACTGCAACTTTCTCAATA---TTCAGTTTCCAAGTGAACTGTGTTCATT--TCTACAAAATAAAACCAAAGACAATCA---ATTATTATTCTTACTTGGATATGTGGATACAATTTCATCGTCACTGCCAACATCCAAGTAAATCTCA--------GAACTTCAACGAGGCTTTCCTGAGAACA---------ACATGCGCATGTTT-------TGTGTTTAAAGTCTG-TTTATTTT---TAAGATAACGGAACATA--CA-------------ACA-AGA------------A------TGTGACTTTGATATAGACACATTAAAACCGTTGCCGCATGTTTCGTTTCGTGGAAA---TGCCCT-AAAGATGTTT-ATAAA-TCAT-TCAAACTAGATTTTT-AGAAAACGACAATATATTTAAATAATTTACTTTATATTAC------AAGAC-----TT--TATAT-T-----T----------------------------------------TTTATAAA--------TCTTATTGTG------ATAATTT--TA-ATTA-TATT------AATATTGAAA-----------TAAAACATAAATGTTTGTATACTCTACAGAAATGGAGGAATAATAGTTGATtg
gi|6 : aTGCTAATATCTAAGCAAATCTCAGAATCTATCAACTTCATTGTTGTTTTCATAAGAACATAATTTATTATATACGCTTTTTAACAAAT--ATGTGTTTA---TGGTTTATACTAATTGA-AGAATA--ATATAAGTACTGATGTTGAACGAAACGAAATTGAAACATGTA------TATGATTTTAATATAAACACATTAAA--TATT--TTCATA-------TCCGTGAAATATTAACCT-AAATG---ATAATTAA-TTTTATCAAACTAGAATTTA-ACACCACGACATTAGTCTTAACTTATAGACGTTAAATT-CAATATAAATATACTAATG--TATAT-T-----AACACTGATGCTACCGTATCAACTGATGATAACCATTGAT-TTTATAAA-GAA
gi|7 : ACGATTTTAATATAAACACATAAAA--CAC--------GTTTAGTTTCAGTGAAA---TTACTT-AAATGTGAAT-ATAAA-TCAT-TCACACTAGAGTTG--GCAACACGTCAACAGATTTAAATAATTTACTTTAATTTATAA-GTAAAGACAATTATTATTATTTGCAG---TACACCGG---------------TGATAA-AACCATTGAC-TTTTTAAA-AAACAA-TATTATTTTGTAACTCCTAATGTGATA-ATTA-TATC------TATATTGTGATATCATTTGTATAAAATACAAATATTTGTTTAATCTCCAGTTATGGGAGAATAAaaggttat
gi|8 : gcacacgattgctatttattaaatctatttctgaaaggtaatctatcggcatagaagaactcttcaaaAACA-TTACATTGAGCAACTCATGTGTTCAACAACGTTTTCTTG-AAAA-----C-A----------------AAAAAA-------A-TACATTTCGAACAGCATT-AAT-GGGAATTACGAATACGCGCAGACGCTGATTGCTTCCGGTTTTGAAGGGTCTACACTTGGCTCTCTCCGGGAATCGTTTGGCCCACTGCACTGGAGTACACGTCTTCCATAGACTTCGTGACGTTCTTGGCCATATTATGT--TGTA-AGCAAAATC----------AAGAACTGTGTAACATGTCAGGCACA--ATATACATATGAACTG-TTCCATAAA-G---TCAA----ATGTAG
gi|9 : t--CATT--TTCATGTTTTGTTTCAGTGAAA---TGACTTAAAATG-GTTT-ATAAG-TCAT-TCAAACTAAAGTTTTGAAAAC-CGACACTATATTTGAATAATTTACTTTATATTACAA-ATAAAG------ATT--TACAT-CTGTAATACAC--------------------ATAT-AACCAGAGAA-TTTATAAA-----AAATATTGTTTTATGATTTATATTGTGATA-ATTG-TATT------TATATT------TTATATGTGTAAAATTTAAATGCTTGTAAAATGTCTAGAAATAGAGTATTAAAAGTTGAtttttgtgctgttgcacagtaataaa
Alignments
lowQualScore : 1 1 1 11 11 222222222 11111 222222222 33333333 44444444444444444444444 11 11 1 1 222222 11 222 11 111 222222222 11111 111 1111 888888888888888888888888888888888888888888888 1111 1111111 777777777777777777777 11111 2222222222 111111
lowQualScore : 1 3 0 0 3 1 7 1 3 3 1 1 2 4 55 99 1 7 7 6 6 33 00 33 0 88 1 2 222222222 0 0 44444 444444444 22222222 77 44 77777777777777777777777 666 11 0 0 4 2 3 33 2 1 3 44 0 33 0 0 0 3 3 555555 1 7 11 1 1 1 7 2 1 333 1 3 11 0 3 0 444 3 1 0 666666666 6 3 88888 3 444 8 1111 0 333333333333333333333333333333333333333333333 1 1 77 0 77 1 888 5 3 33 5 4 4 4 1 11 1 1 0 5 0 4444 1111111 444444444444444444444 66 4 66 4 22222 1111111111 1 3 3 3 5 5 666666 3 1 2 0 1 0 1 0 0
lowQualScore : . . . . . . . . . . . . . . .. .. . . . . . .. .. .. . .. . . ......... . . ..... ......... ........ .. .. ....................... ... .. . . . . . .. . . . .. . .. . . . . . ...... . . .. . . . . . . ... . . .. . . . ... . . . ......... . . ..... . ... . .... . ............................................. . . .. . .. . ... . . .. . . . . . .. . . . . . .... ....... ..................... .. . .. . ..... .......... . . . . . . ...... . . . . . . . . .
lowQualScore : 0 2 2 7 7 0 3 0 3 7 0 0 0 0 77 33 0 3 3 7 5 55 55 88 2 00 0 5 000000000 2 8 88888 555555555 00000000 55 33 33333333333333333333333 333 22 2 8 2 5 2 88 5 0 2 22 2 88 0 8 0 2 0 555555 0 0 22 0 0 2 0 5 0 555 4 2 00 8 2 6 000 2 0 7 777777777 0 2 66666 8 000 0 2222 8 000000000000000000000000000000000000000000000 0 7 99 1 99 7 888 0 2 22 0 4 4 4 1 99 1 0 4 0 1 2222 8888888 666666666666666666666 99 5 77 1 55555 2222222222 4 6 6 0 7 7 444444 0 4 4 5 1 4 2 5 8
consensus : CCGGTTGTCAAAGAATACAAACGTCTTGGANTAATCCAGAATAACAGACGGAAATCCCCTGCAAATGTAGACACGGTGCGTCGAACTACGCGGGGAACGNTGTTCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCCACCTTACCCGCTCAGACATGGTCACCGGCTTACTTGGGTTCACGTCATTAGAAGCATANATAGACTTACAAAAGTTATC-TTCCTTGGTACGCTATGCCGACTTAAAGCAACAGACGTTACGNTCCANTTATTCCTCAANCAGACTTTACCAATGCAACAACAAGTGTACAAAACGAGAAAAATGGCTTTATAAACGATATCCTACAAANACTCAGAAAATACAAACTTGAACANTACATCGAGCAATTCATGTNATCAACNACATTTCCTGNAAAAG-AA-C-ACGGAAAAGTA-TT-GTAAAAAA-CAA-T-A-TAAACTTCGAAGAGCANC-A-T-GGTNATTACGAATAAACGCAGACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATCGGCTATCTCC-GGGA--C-GTTTGG-CCA-CTGCACTGGAGAACNCGTCTTCCATCGAATCCATGACGTTCTTGGCCAAATTATGT--TGTGCANCAAAATCAAACCAAATAAAGAACTGTNTAACATGCGAGGCACA--ATATACAGATGAACTG-TTTCATAAA-GTTTTCAAA----TGTAGCNGTAATAA-ACNTCAATCCACGNGGATAGCGTACTGGAACTNTCTCAATATTCA--GTTTCCAAGTGACTTATGCTCATTT--CTACGAAACAGTACCAAAGACATTCA---ATTACTATTCTTGCTTGGATATGTAGATACACTTTTATCTTCACTGTTAACATCAAAGCAAATCTCAGAATTTATGAACTTCAACGCTGCTTTCCTGAGAACA---------ATATACGCTTGTTAATAAATGTATGTCTAAA---TGATTTACATT---TAA-AGAATG--ATATA--TA-------------AAA-GGAATTAAAA-C-T-------G-ATACGATTTTGATATAAACACATTAAA--CATTTTC--ATGTTTCGTTTCGGTGAAA---TAACTT-AAATGTGNAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ACAACACGACAACAGATTTAAATAATTTACTTTAANTTACAA-ATAAAGACAATTATT--T----ATAT---------------C----GTAC--ACCGATGATAAAACCATTGACTTTAT-----AAANA-A--A-ACTATTATTTTGTAATTCATAATGTGATA-ATTG-TATT------TATATTGNAATATTATTTGTGTAAAATTTAAATGTTTGTAAAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAAT
Reference ( family-1139 ) : CCGGTTGTCAAAGAATACAAACGTCTTGGANTAATCCAGAATAACAGACGGAAATCCCCTGCAAATGTAGACACGGTGCGTCGAACTACGCGGGGAACGNTGTTCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCCACCTTACCCGCTCAGACATGGTCACCGGCTTACTTGGGTTCACGTCATTAGAAGCATANATAGACTTACAAAAGTTATC-TTCCTTGGTACGCTATGCCGACTTAAAGCAACAGACGTTACGNTCCANTTATTCCTNAACCAGACTTTACCAATGCAACAACAAGTGTACAAAACGAGAAAAATGGCTTTATAAACGATATCCTACAAANACTCAGAAAATACAAACTTGAACAGTACATCGAGCAATTCATGTNATCAACNACATTTCCTGCAAAAG-AA-C-ACGGAAAAGTA-TT-GTAAAAAA-CAA-T-A-TAAACTTCGAAGAGCANC-A-T-GGTNATTACGAATAAACGCAGACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATCGGCTATCTCC-GGAA--C-GTTTGG-CCA-CTGCACTGGAGAACNCGTCTTCCATCGAATCCATGACGTTCTTGGCCAAATTATGT--TGTGCANCAAAATCAAACCAAATAAAGAACTGTNTAACATGCGAGGCACA--ATATACAGATGAACTG-TTTCATAAA-GTTTTCAAN----TGTAGCNGTAATAA-ACNTCAATCCACGNGGATAGCGTACTGGAACTNTCTCAATATTCA--GTTTCCAAGTGACTTATGCTCATTT--CTACGAAACAGTACCAAAGACATTCA---ATTACTATTCTTGCTTGGATATGTAGATACACTTTTATCTTCACTGTTAACATCAAAGCAAATCTCAGAATTTATGAACTTCAACGCTGCTTTCCTGAGAACA---------ATATACGCTTGTTAATAAATGTATGTCTANA---TGATTTACATT---TAA-AGAATG--ATATA--TA-------------AAA-GGAATTAAAA-C-T-------G-ATACGATTTTGATATAAACACATTAAA--CATTTTC--ATGTTTCGTTTCGGTGAAA---TAACTT-AAATGTGNAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ACAACACGACAACAGATTTAAATAATTTACTTTAANTTACAA-ATAAAGACAATTATT--T----ATAT---------------C----GTAC--ACCGATGATAAAACCATTGACTTTAT-----AAANA-A--A-ACTATTATTTTGTAATTCATAATGTGATA-ATTG-TATT------TATATTGNAATATTATTTGTGTAAAATTTAAATGTTTGTAAAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAAT
gi|1 : CCAGTCGTCAAAGAATACAAACATCTTGGAATAATCCAGAATAACAGACGGAACTCCCCTGCAAATGTAGATATGGTGCGTCAAACTACGCGGGGATCGCTGTTCTCGT
gi|1 : TACCCCATCTTACCCGCTCAGACATGGTCACCGGTTTACTTGGGTTTACGTCATTAGAAGCATACATAGACTTACAAAAGTTATCGTTCCTTGGTACGATTTGTAGACTTAAAGCAACAGACAATACGCTCCAGCTATTTCTCAAT-AGACTTTACCAATGCAAAAACATGTGTACAAAACGA-AACAATGGCTTTATAAACGATATCCTACAAATACTCAGAAAATACAAACTGGAACAATATATCGAGCAATTCATGTTATCAACAACATTTCCTGCAAAAG-AA-CCATGGAAAAGTG-TTTGTAAAAAAACAA-T-AATAAACTTCGAAGAACAGC-A-TTGGTTATTACGAATTAACGCAAACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATAAACTATCTCCTGGAA--CAGTCTGG-CTAACTGCATTAGAGAATCCGTCTTCCATCGAGTCCATGACATTCTTAGGCAAATTATGC--TGTGCAGCAAAACCAAACCAAATAAAGAACTGTTTAACATGCAAGGCACA--ATATACAGATGAACTG-TTTCATAAA-GTTTTTGAT----TGTAGCAGTAATAA-ACATCAATCCACGAGGATGGCGTACTGGAACTCTCTCAATATTCA--GTTTCCAAGTGATTTATGCTCATTT--C-----AACAGTACCAAAGACATTCA---ATTACTATTCTTGATTGGATATGTAGATATACTTTTATCTTCACTGTTAACAGTAAAGCAAATCTCAGAATTTATGAACTTTAATGCTGCTTTCCTGAGATCA---------ATATACGCTTGTTAATAAATGCACGTCTATA---TGATTTACATG---TAG-AGAATG--ATAT---TA-------------AAA-TGAATTAAGACC-T-------G-AAACAA----GATATACACACTTTAAA--CATTTTC--ATGTTTCGTTTCGGTGAAA---TAACCT-AAATGTGCAT-ATAAA-TCAT-TCAAACTAGAGTCCT-ACAACAAGACAACAGATTTAAATAATTTACTTTAATTCACGA-ATAAAGACAGTTATT--T----ATAT---------------C-----TAC--ATCGATGATAAAACCATAGACTTTGT-----AAATATT--A-ACTATTATTTTGTAATTCACAATGTGATC-ATAG-TATT------TATATTGTAATATTATATGTATAAAATCAAAATGTTTGTAAAATCTCCAGAAATGGGGGAATAAAAGTTGATAATAATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacctaccccatcttacccgctcagacatggtcaccggtttacttgggtttacgtcattagaagcatacatagacttacaaaagttatcgttccttggtacgatttgtagacttaaagcaacagacaatacgctccagctatttctcaatagactttaccaatgcaaaaacatgtgtacaaaacgaaacaatggctttataaacgatatcctacaaatactcagaaaatacaaactggaacaatatatcgagcaattcatgttatcaacaacatttcctgcaaaagaaccatggaaaagtgtttgtaaaaaaacaataataaacttcgaagaacagcattggttattacgaattaacgcaaacgatgattgcttccggtttcgaagggtccacaataaactatctcctggaacagtctggctaactgcattagagaatccgtcttccatcgagtccatgacattcttaggcaaattatgctgtgcagcaaaaccaaaccaaataaagaactgtttaacatgcaaggcacaatatacagatgaactgtttcataaagtttttgattgtagcagtaataaacatcaatccacgaggatggcgtactggaactctctcaatattcagtttccaagtgatttatgctcatttcaacagtaccaaagacattcaattactattcttgattggatatgtagatatacttttatcttcactgttaacagtaaagcaaatctcagaatttatgaactttaatgctgctttcctgagatcaatatacgcttgttaataaatgcacgtctatatgatttacatgtagagaatgatattaaaatgaattaagacctgaaacaagatatacacactttaaacattttcatgtttcgtttcggtgaaataacctaaatgtgcatataaatcattcaaactagagtcctacaacaagacaacagatttaaataatttactttaattcacgaataaagacagttatttatatctacatcgatgataaaaccatagactttgtaaatattaactattattttgtaattcacaatgtgatcatagtatttatattgtaatattatatgtataaaatcaaaatgtttgtaaaatctccagaaatgggggaataaaagttgataataat
gi|10 : ccagtcgtcaaagaatacaaacatcttggaataatccagaataacagacggaactcccctgcaaatgtagatatggtgcgtcaaactacgcggggatcgctgttctcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaccGAAA---TAACTT-AGATGTGGCT-ATAAAATCAT-TCGAACTAGAGAATT-ACGACACGACAACGGATTTAAATAGTTTACTTTAATTTACAA-GTA----------TT--T----GCAC---------------------TAC--ACCGATGATTAAACCATTGACGTT-T-----AAAAA-A--A-A
gi|11 : AAATAATAAAATGTA-AACATGTGAGGCACACTATATACAGATGAAAAAATTGAATGTA-GTTGTCAAAAACTTGTCACCATA-TAAGACTGTAATTCACGTGGGTAGAGAACTGGACTTGTCTGAATATTTTTTGTTTCCAGGTGATTTATA---ATTAAACTATGCAACAGTACCAAATACATTCA---GCTACTATTagaagtaatcttcttctttttttcttcttcttctgattgtaattattgttattaaaattatgttgttataagcaaattacctttctatataa
gi|12 : -TCAT-TCAAACTAAAGTCTT-AGAAGACGTCTATAGATTTAGATAATTTACTTTATGTTACAA-ATAAAGACAATTATT--TACAAATAT---------------A----GTAC--ATAGATt
gi|12 : atgtATTTACTTTATGTTACAAATA-A--AGACAATTATTT----A--CA-AATATAGTACATAGATATT------CATATTGAACTACCTTTTGTGTAAAACTTAAATACTTGTAATATCTCCGGATATGGAGGAATACAATTTTATAATAattcatattgaactaccttttgtgtaaaacttaaatacttgtaatatctccggatatggaggaatacaattttataata
gi|13 : atgttcattcaaactaaagtcttagaagacgtctatagatttagataGTAATTCATAACG--ATA-AATG-TATTAATTTCTATAGTGAAATAGAATTTATGTAAATTCTTAATGTTTGTAAAATCTCCAAATATGGAGGAATAAAAGATGATAATAA
gi|14 : CCGGTTTCCAAAGAATACAAAGGTCTTGGAAAAATTCAGAGTAACAGACGACAATCCCCTACAAGTGTAGACACGTTTCGTcaataatccat
gi|15 : tTACATACACTTTTATCTTCACTGTTAACATCAACGCAA-TTTCTAAATTTATAATCTTCAATGCTGCTTTCCTGAGAATA---------ATATtagtaaact
gi|16 : ATTTGAATAAA--TGAAATCTCTG--AAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAATtc
gi|2 : TTGTCAATGAATACAAACATCTTAGATTAATCCAGAATAACAGACGGAAATCCCC-GCAAATGTAGACACGGTGGGTCAAACTGCACATTGAACGTTGTTCTCGTat
gi|2 : catTACCTCACCTTACCCGCTCAGACATGGTTACTGGCTTATTTGGGTTCACGTCATTAGAAGCATAGAAATACTTACAGAAGTTATC-TGCCTTGGTATGCTATGCCGACTTAAAACAACAGACGTTACGTTACATTTATTCCT-AAGCATACATTACAAATGCTACAACAAGTGTAAAAAACGAAAAAAATGGCTTTATAAACGATATCCTACAAAGATTCAGAAAATACAAACGT------TACA-------------------AACCACATTTCCTGAAAAAG-AACC-ACGAAAAGGTA-TT-GTAAAAAA-CAA-TAA-TAAACTTCAAAGAGC---------------ACGAATAAACGCAAGCGATGATTGCTTCCGGTTTCAAAtaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatattacctcaccttacccgctcagacatggttactggcttatttgggttcacgtcattagaagcatagaaatacttacagaagttatctgccttggtatgctatgccgacttaaaacaacagacgttacgttacatttattcctaagcatacattacaaatgctacaacaagtgtaaaaaacgaaaaaaatggctttataaacgatatcctacaaagattcagaaaatacaaacgttacaaaccacatttcctgaaaaagaaccacgaaaaggtattgtaaaaaacaataataaacttcaaagagcacgaataaacgcaagcgatgattgcttccggtttcaaaaaacgtcttccatcgaatctatgacattcttggcaaatatgttgtgcatcaaaatcaaaccaaataaagaactgtttgacatgcgaggtacaatatacagatgaactatttcgtaattgtttttaaagtagctgtagtaggcatcattccacgtggttgcgtactggaataacctcaatattccaagtgacatatgcttatttctaagaagcaatacaaaatacattcaataactattcttgcttggatttgtagatacactgctaacttaaatgtcaacattaatgcaaatctcagaagctatgaactgtaacgctgctttcatgagaacagtatacgcttgcttataaatgtatttcttaataatttacatttaaagactgttattttaagaaaataaaacttgaaaaaggtacgattttaatttatcacattaaagattttcatgtatctttttggtgaaataacttaaatgtggatataaatcattcaaactagagttttaaaacgagacaacatatttaaatagtttaccttaaa
gi|2 : catttgtcaatgaatacaaacatcttagattaatccagaataacagacggaaatccccgcaaatgtagacacggtgggtcaaactgcacattgaacgttgttctcgttaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatatAAAAAACGTCTTCCATCGAATCTATGACATTCTTGGC-AAAT-ATGT--TGTGCATCAAAATCAAACCAAATAAAGAACTGTTTGACATGCGAGGTACA--ATATACAGATGAACTA-TTTCGTAATTGTTTTTAAA-----GTAGCTGTAGTAG-GCATCATTCCACGTGGTT-GCGTACTGGAATAACCTCAATATTC--------CAAGTGACATATGCTTATTT--CTAAGAAGCAATACAAAATACATTCA---ATAACTATTCTTGCTTGGATTTGTAGATACACTGCTAACTTAAATGTCAACATTAATGCAAATCTCAGAAGCTATGAACTGTAACGCTGCTTTCATGAGAACA---------GTATACGCTTGCTTATAAATGTATTTCTTAA---TAATTTACATT---TAA-AGACTG--TTAT---TT-------------TAA-GAAAATAAAA-C-TTGAAAAAG-GTACGATTTTAAT-TTATCACATTAAA--GATTTTC--ATGTATCTTTTTGGTGAAA---TAACTT-AAATGTGGAT-ATAAA-TCAT-TCAAACTAGAGTTTT-AAAACGAGACAACATATTTAAATAGTTTACCTTAAaaacgtcttccatcgaatctatgacattcttggcaaatatgttgtgcatcaaaatcaaaccaaataaagaactgtttgacatgcgaggtacaatatacagatgaactatttcgtaattgtttttaaagtagctgtagtaggcatcattccacgtggttgcgtactggaataacctcaatattccaagtgacatatgcttatttctaagaagcaatacaaaatacattcaataactattcttgcttggatttgtagatacactgctaacttaaatgtcaacattaatgcaaatctcagaagctatgaactgtaacgctgctttcatgagaacagtatacgcttgcttataaatgtatttcttaataatttacatttaaagactgttattttaagaaaataaaacttgaaaaaggtacgattttaatttatcacattaaagattttcatgtatctttttggtgaaataacttaaatgtggatataaatcattcaaactagagttttaaaacgagacaacatatttaaatagtttaccttaaa
gi|3 : catttgtcaatgaatacaaacatcttagattaatccagaataacagacggaaatccccgcaaatgtagacacggtgggtcaaactgcacattgaacgttgttctcgttaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatattacctcaccttacccgctcagacatggttactggcttatttgggttcacgtcattagaagcatagaaatacttacagaagttatctgccttggtatgctatgccgacttaaaacaacagacgttacgttacatttattcctaagcatacattacaaatgctacaacaagtgtaaaaaacgaaaaaaatggctttataaacgatatcctacaaagattcagaaaatacaaacgttacaaaccacatttcctgaaaaagaaccacgaaaaggtattgtaaaaaacaataataaacttcaaagagcacgaataaacgcaagcgatgattgcttccggtttcGTTGTCAAAGAATACAAACGTCTTAGTTTTATCCGGAATAACAGATGGAAATCCGCTGTAAATTTAGATACTGTGTGCCGAACCACCCGGGGAACGGTGTTCTCGTa
gi|3 : CCCCACCTTACCCATTCAGACA--GTCACCGGCTTACTTGGGTTCACATGATAAGAAGCATATATAGATCTACAAAAGTTATC-TTCCTTGGTGCGCTATACTGACATAAAGCAACAGATGTTACGGTCCTATTATT-CTTAACTAGACTTTACCAATGCAACAACAAGTGTACACAACG-GTAAAATGGCTTTAAAAACGATATCCTACAAAAAC------AAT-----CTTGAACAGTACATCGAATAATGCATATCATCAAGCACATTTCCTGCAAAAGAAA-T-ATGGAAAAGTATTT-GTAAAAAA-CAATT-A-TAAACTTCGAAGAGCAACAA-T-GGTCATTACGAATAAACGCAGACGATAACTGCTTTCGGTTTCGAAGCTTTCACAATCAGCTATC--------------TTGG---------------GAACTCGTCTTCCATTGAATCCATGACTTTCTTGGCCAAATTATGTCATGTGCACCAAAATCAAACCAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttatccccaccttacccattcagacagtcaccggcttacttgggttcacatgataagaagcatatatagatctacaaaagttatcttccttggtgcgctatactgacataaagcaacagatgttacggtcctattattcttaactagactttaccaatgcaacaacaagtgtacacaacggtaaaatggctttaaaaacgatatcctacaaaaacaatcttgaacagtacatcgaataatgcatatcatcaagcacatttcctgcaaaagaaatatggaaaagtatttgtaaaaaacaattataaacttcgaagagcaacaatggtcattacgaataaacgcagacgataactgctttcggtttcgaagctttcacaatcagctatcttgggaactcgtcttccattgaatccatgactttcttggccaaattatgtcatgtgcaccaaaatcaaacca
gi|4 : gttgtcaaagaatacaaacgtcttagttttatccggaataacagatggaaatccgctgtaaatttagatactgtgtgccgaaccacccggggaacggtgttctcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttatTTCTAACGGACTTATGCTCGTGT--CTACGAAACGGTATTAAAGACGCTCAGGTACTACTATTCTTGCTTGGGTATGTAGATATACTTTTATCTTCACTGTTAACATTAAAGTAAATCTCAGAATTCATGAACTTTAATGCTGCTTTCCTGAAAACT---------ATATGCGTTTGCTAATAAATGTATTTCTAGA---TGATTTACATT---TAA-AGAA-A--AT-CA--AA-------------AAA-GGAA-CAA-----T-------G-ATACGATTTTGATAGAAACACATTTAA--CA-TTTC--ATGTTTCGTTTCTGCTAAA---TAACTT-AAATGTGCAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ACAA---GACAACATCTTTAAATAATTTACTTAAATTTTCAA-ATAAAGACAAGTAAT--A----ATAT---------------TTGCAGTAC--ACCGATGATAAAACCAATGACTATGT-----AAACG-AATA-ATTATTATTTTGTAATTCAGAATGTGATA-ATTG-TATT------TATATTGTAATATTATTTGTATAAAATTTAAATGTTTATACAATAT-CAGAAATGGAGGAGTAAAA
gi|5 : GTAGCAGCAATAT-ACTTCAATTCACGAGGATAGAATACTGCAACTTTCTCAATATTCA--GTTTCCAAGTGAACTGTGTTCATTT--CTACAAAATAAAACCAAAGACAATCA---ATTATTATTCTTACTTGGATATGTGGATACAATTTCATCGTCACTGCCAACATCCAAGTAAATCTCAGAA--------CTTCAACGAGGCTTTCCTGAGAACA---------ACATGCGCATGTT------T-TGTGTTTAAAGTCTG-TTTATTTT---TAAGATAACGGAACATA--CA-------------ACA-AGAAT--------------------GTGACTTTGATATAGACACATTAAAACCGTTGCCGCATGTTTCGTTTCGTGGAAA---TGCCCT-AAAGATGTTT-ATAAA-TCAT-TCAAACTAGATTTTT-AGAAAACGACAATATATTTAAATAATTTACTTTATATTAC------AAGAC-----TT--T----ATAT------------------------------------------TT---TTTAT-----AAA----------TCTTATTGTG------ATAATTT--TA-ATTA-TATT------AATATTGAAA-----------TAAAACATAAATGTTTGTATACTCTACAGAAATGGAGGAATAATAGTTGATtg
gi|6 : aTGCTAATATCTAAGCAAATCTCAGAATCTATCAACTTCATTGTTGTTTTCATAAGAACATAATTTATTATATACGCTTTTTAACAAATATGTGTTTA-----TGGTTTATACTAATTGA-AGAATA--ATATAAGTACTGATGTTGAACGAAACGAAATTGAAA-CAT-------GTATATGATTTTAATATAAACACATTAAA--TATTTTC--ATA-------TCCGTGAAATATTAACCT-AAATG---ATAATTAA-TTTTATCAAACTAGAATTTA-ACACCACGACATTAGTCTTAACTTATAGACGTTAAATT-CAATATAAATATACTAATG--T----ATATTAACACTGATGCTACC----GTATCAACTGATGAT--AACCATTGATTTTAT-----AAAGA-A--A-A
gi|7 : ACGATTTTAATATAAACACATAAAA--CAC--------GTTTAGTTTCAGTGAAA---TTACTT-AAATGTGAAT-ATAAA-TCAT-TCACACTAGAGTTG--GCAACACGTCAACAGATTTAAATAATTTACTTTAATTTATAA-GTAAAGACAATTATTATT----ATTTG--------------CA---GTAC--ACCGGTGATAAAACCATTGACTTTTT-----AAAAA-A--C-AATATTATTTTGTAACTCCTAATGTGATA-ATTA-TATC------TATATTGTGATATCATTTGTATAAAATACAAATATTTGTTTAATCTCCAGTTATGGGAGAATAAggttat
gi|8 : gcacacgattgctatttattaaatctatttctgaaaggtaatctatcggcatagaagaactcttcaaaAACATTACATTGAGCAACTCATGTGTTCAACAACGTTTTCTTGAAAA-----C-A----------------AAAAAA-------A-TACATTTCGAACAGCATT-AAT-GGGAATTACGAATACGCGCAGACGCTGATTGCTTCCGGTTTTGAAGGGTCTACACTTGGCTCTCTCC-GGGAATC-GTTTGGCCCA-CTGCACTGGAGTACACGTCTTCCATAGACTTCGTGACGTTCTTGGCCATATTATGT--TGTA-AGCAAAATC----------AAGAACTGTGTAACATGTCAGGCACA--ATATACATATGAACTG-TTCCATAAA-G---TCAAA----TGTAG
gi|9 : t--CATTTTC--ATGTTTTGTTTCAGTGAAA---TGACTTAAAATG-GTTT-ATAAG-TCAT-TCAAACTAAAGTTTTGAAAAC-CGACACTATATTTGAATAATTTACTTTATATTACAA-ATAAAG------ATT--T----ACAT---------------CTGTAATAC--AC-----ATATAACCAGAGAATTTAT-----AAAAA-A------TATTGTTTTATGATTTATATTGTGATA-ATTG-TATT------TATATT------TTATATGTGTAAAATTTAAATGCTTGTAAAATGTCTAGAAATAGAGTATTAAAAGTTGAtttttgtgctgttgcacagtaataaa
Alignments
lowQualScore : 1 1 1 11 11 222222222 11111 222222222 33333333 44444444444444444444444 11 11 1 1 22222 11 222 11 111 222222222 11111 111 1111 888888888888888888888888888888888888888888888 1111 1111111 777777777777777777777 11111 2222222222 111111
lowQualScore : 1 3 0 0 3 1 7 1 3 3 1 1 2 2 33 99 1 7 7 6 4 33 00 33 0 88 1 1 222222222 0 0 44444 444444444 22222222 77 44 77777777777777777777777 666 11 0 0 4 2 3 33 2 1 3 44 0 33 0 0 0 3 3 44444 1 7 11 1 1 1 7 2 1 333 1 3 11 0 3 0 444 3 1 0 666666666 6 3 88888 3 444 8 1111 0 333333333333333333333333333333333333333333333 1 1 77 0 77 1 888 5 3 33 5 4 4 4 1 11 1 1 0 5 0 4444 1111111 444444444444444444444 66 4 66 4 22222 1111111111 1 3 3 3 5 5 666666 3 1 2 0 1 0 1 0 0
lowQualScore : . . . . . . . . . . . . . . .. .. . . . . . .. .. .. . .. . . ......... . . ..... ......... ........ .. .. ....................... ... .. . . . . . .. . . . .. . .. . . . . . ..... . . .. . . . . . . ... . . .. . . . ... . . . ......... . . ..... . ... . .... . ............................................. . . .. . .. . ... . . .. . . . . . .. . . . . . .... ....... ..................... .. . .. . ..... .......... . . . . . . ...... . . . . . . . . .
lowQualScore : 0 2 2 7 7 0 3 0 3 7 0 0 0 0 00 33 0 3 3 7 5 55 55 88 2 00 0 0 000000000 2 8 88888 555555555 00000000 55 33 00000000000000000000000 333 22 2 8 2 5 2 88 5 0 2 22 2 88 0 8 0 2 0 55555 0 0 22 0 0 2 0 5 0 555 4 2 00 8 2 6 000 2 0 7 777777777 0 2 88888 8 000 0 2222 8 000000000000000000000000000000000000000000000 0 7 99 1 99 7 888 0 2 22 0 4 4 4 1 99 1 0 4 0 1 2222 8888888 666666666666666666666 99 5 77 1 55555 2222222222 4 6 6 0 7 7 444444 0 4 4 5 1 4 2 5 8
consensus : CCGGTTGTCAAAGAATACAAACGTCTTGGANTAATCCAGAATAACAGACGGAAATCCCCTGCAAATGTAGACACGGTGCGTCGAACTACGCGGGGAACGNTGTTCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCCACCTTACCCGCTCAGACATGGTCACCGGCTTACTTGGGTTCACGTCATTAGAAGCATANATAGACTTACAAAAGTTATC-TTCCTTGGTACGCTATGCCGACTTAAAGCAACAGACGTTACGNTCCANTTATTCCTCAANCAGACTTTACCAATGCAACAACAAGTGTACAAAACGAGAAAAATGGCTTTATAAACGATATCCTACAAANACTCAGAAAATACAAACTTGAACANTACATCGAGCAATTCATGTNATCAACNACATTTCCTGNAAAAG-AA-C-ACGGAAAAGTA-TT-GTAAAAAA-CAA-T-A-TAAACTTCGAAGAGCANC-A-T-GGTNATTACGAATAAACGCAGACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATCGGCTATCTCC-GGGA--C-GTTTGG-CCA-CTGCACTGGAGAACNCGTCTTCCATCGAATCCATGACGTTCTTGGCCAAATTATGT--TGTGCANCAAAATCAAACCAAATAAAGAACTGTNTAACATGCGAGGCACA--ATATACAGATGAACTG-TTTCATAAA-GTTTTCAAA----TGTAGCNGTAATAA-ACNTCAATCCACGNGGATAGCGTACTGGAACTNTCTCAATATTCA--GTTTCCAAGTGACTTATGCTCATTT--CTACGAAACAGTACCAAAGACATTCA---ATTACTATTCTTGCTTGGATATGTAGATACACTTTTATCTTCACTGTTAACATCAAAGCAAATCTCAGAATTTATGAACTTCAACGCTGCTTTCCTGAGAACA---------ATATACGCTTGTTAATAAATGTATGTCTAAA---TGATTTACATT---TAA-AGAATG--ATATA--TA-------------AAA-GGAATTAAAA-C-T-------G-ATACGATTTTGATATAAACACATTAAA--CATTTTC--ATGTTTCGTTTCGGTGAAA---TAACTT-AAATGTGNAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ACAACACGACAACAGATTTAAATAATTTACTTTAANTTACAA-ATAAAGACAATTATT--T----ATAT---------------C----GTAC--ACCGATGATAAAACCATTGACTTTAT-----AAANA-A--A-ACTATTATTTTGTAATTCATAATGTGATA-ATTG-TATT------TATATTGNAATATTATTTGTGTAAAATTTAAATGTTTGTAAAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAAT
Reference ( family-1139 ) : CCGGTTGTCAAAGAATACAAACGTCTTGGANTAATCCAGAATAACAGACGGAAATCCCCTGCAAATGTAGACACGGTGCGTCGAACTACGCGGGGAACGNTGTTCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCCACCTTACCCGCTCAGACATGGTCACCGGCTTACTTGGGTTCACGTCATTAGAAGCATANATAGACTTACAAAAGTTATC-TTCCTTGGTACGCTATGCCGACTTAAAGCAACAGACGTTACGNTCCANTTATTCCTCAANCAGACTTTACCAATGCAACAACAAGTGTACAAAACGAGAAAAATGGCTTTATAAACGATATCCTACAAANACTCAGAAAATACAAACTTGAACANTACATCGAGCAATTCATGTNATCAACNACATTTCCTGNAAAAG-AA-C-ACGGAAAAGTA-TT-GTAAAAAA-CAA-T-A-TAAACTTCGAAGAGCANC-A-T-GGTNATTACGAATAAACGCAGACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATCGGCTATCTCC-GGGA--C-GTTTGG-CCA-CTGCACTGGAGAACNCGTCTTCCATCGAATCCATGACGTTCTTGGCCAAATTATGT--TGTGCANCAAAATCAAACCAAATAAAGAACTGTNTAACATGCGAGGCACA--ATATACAGATGAACTG-TTTCATAAA-GTTTTCAAA----TGTAGCNGTAATAA-ACNTCAATCCACGNGGATAGCGTACTGGAACTNTCTCAATATTCA--GTTTCCAAGTGACTTATGCTCATTT--CTACGAAACAGTACCAAAGACATTCA---ATTACTATTCTTGCTTGGATATGTAGATACACTTTTATCTTCACTGTTAACATCAAAGCAAATCTCAGAATTTATGAACTTCAACGCTGCTTTCCTGAGAACA---------ATATACGCTTGTTAATAAATGTATGTCTAAA---TGATTTACATT---TAA-AGAATG--ATATA--TA-------------AAA-GGAATTAAAA-C-T-------G-ATACGATTTTGATATAAACACATTAAA--CATTTTC--ATGTTTCGTTTCGGTGAAA---TAACTT-AAATGTGNAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ACAACACGACAACAGATTTAAATAATTTACTTTAANTTACAA-ATAAAGACAATTATT--T----ATAT---------------C----GTAC--ACCGATGATAAAACCATTGACTTTAT-----AAANA-A--A-ACTATTATTTTGTAATTCATAATGTGATA-ATTG-TATT------TATATTGNAATATTATTTGTGTAAAATTTAAATGTTTGTAAAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAAT
gi|1 : CCAGTCGTCAAAGAATACAAACATCTTGGAATAATCCAGAATAACAGACGGAACTCCCCTGCAAATGTAGATATGGTGCGTCAAACTACGCGGGGATCGCTGTTCTCGT
gi|1 : TACCCCATCTTACCCGCTCAGACATGGTCACCGGTTTACTTGGGTTTACGTCATTAGAAGCATACATAGACTTACAAAAGTTATCGTTCCTTGGTACGATTTGTAGACTTAAAGCAACAGACAATACGCTCCAGCTATTTCTCAAT-AGACTTTACCAATGCAAAAACATGTGTACAAAACGA-AACAATGGCTTTATAAACGATATCCTACAAATACTCAGAAAATACAAACTGGAACAATATATCGAGCAATTCATGTTATCAACAACATTTCCTGCAAAAG-AA-CCATGGAAAAGTG-TTTGTAAAAAAACAA-T-AATAAACTTCGAAGAACAGC-A-TTGGTTATTACGAATTAACGCAAACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATAAACTATCTCCTGGAA--CAGTCTGG-CTAACTGCATTAGAGAATCCGTCTTCCATCGAGTCCATGACATTCTTAGGCAAATTATGC--TGTGCAGCAAAACCAAACCAAATAAAGAACTGTTTAACATGCAAGGCACA--ATATACAGATGAACTG-TTTCATAAA-GTTTTTGAT----TGTAGCAGTAATAA-ACATCAATCCACGAGGATGGCGTACTGGAACTCTCTCAATATTCA--GTTTCCAAGTGATTTATGCTCATTT--C-----AACAGTACCAAAGACATTCA---ATTACTATTCTTGATTGGATATGTAGATATACTTTTATCTTCACTGTTAACAGTAAAGCAAATCTCAGAATTTATGAACTTTAATGCTGCTTTCCTGAGATCA---------ATATACGCTTGTTAATAAATGCACGTCTATA---TGATTTACATG---TAG-AGAATG--ATAT---TA-------------AAA-TGAATTAAGACC-T-------G-AAACAA----GATATACACACTTTAAA--CATTTTC--ATGTTTCGTTTCGGTGAAA---TAACCT-AAATGTGCAT-ATAAA-TCAT-TCAAACTAGAGTCCT-ACAACAAGACAACAGATTTAAATAATTTACTTTAATTCACGA-ATAAAGACAGTTATT--T----ATAT---------------C-----TAC--ATCGATGATAAAACCATAGACTTTGT-----AAATATT--A-ACTATTATTTTGTAATTCACAATGTGATC-ATAG-TATT------TATATTGTAATATTATATGTATAAAATCAAAATGTTTGTAAAATCTCCAGAAATGGGGGAATAAAAGTTGATAATAATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacctaccccatcttacccgctcagacatggtcaccggtttacttgggtttacgtcattagaagcatacatagacttacaaaagttatcgttccttggtacgatttgtagacttaaagcaacagacaatacgctccagctatttctcaatagactttaccaatgcaaaaacatgtgtacaaaacgaaacaatggctttataaacgatatcctacaaatactcagaaaatacaaactggaacaatatatcgagcaattcatgttatcaacaacatttcctgcaaaagaaccatggaaaagtgtttgtaaaaaaacaataataaacttcgaagaacagcattggttattacgaattaacgcaaacgatgattgcttccggtttcgaagggtccacaataaactatctcctggaacagtctggctaactgcattagagaatccgtcttccatcgagtccatgacattcttaggcaaattatgctgtgcagcaaaaccaaaccaaataaagaactgtttaacatgcaaggcacaatatacagatgaactgtttcataaagtttttgattgtagcagtaataaacatcaatccacgaggatggcgtactggaactctctcaatattcagtttccaagtgatttatgctcatttcaacagtaccaaagacattcaattactattcttgattggatatgtagatatacttttatcttcactgttaacagtaaagcaaatctcagaatttatgaactttaatgctgctttcctgagatcaatatacgcttgttaataaatgcacgtctatatgatttacatgtagagaatgatattaaaatgaattaagacctgaaacaagatatacacactttaaacattttcatgtttcgtttcggtgaaataacctaaatgtgcatataaatcattcaaactagagtcctacaacaagacaacagatttaaataatttactttaattcacgaataaagacagttatttatatctacatcgatgataaaaccatagactttgtaaatattaactattattttgtaattcacaatgtgatcatagtatttatattgtaatattatatgtataaaatcaaaatgtttgtaaaatctccagaaatgggggaataaaagttgataataat
gi|10 : ccagtcgtcaaagaatacaaacatcttggaataatccagaataacagacggaactcccctgcaaatgtagatatggtgcgtcaaactacgcggggatcgctgttctcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaccGAAA---TAACTT-AGATGTGGCT-ATAAAATCAT-TCGAACTAGAGAATT-ACGACACGACAACGGATTTAAATAGTTTACTTTAATTTACAA-GTA----------TT--T----GCAC---------------------TAC--ACCGATGATTAAACCATTGACGTT-T-----AAAAA-A--A-A
gi|11 : AAATAATAAAATGTA-AACATGTGAGGCACACTATATACAGATGAAAAAATTGAATGTA-GTTGTCAAAAACTTGTCACCATA-TAAGACTGTAATTCACGTGGGTAGAGAACTGGACTTGTCTGAATATTTTTTGTTTCCAGGTGATTTATA---ATTAAACTATGCAACAGTACCAAATACATTCA---GCTACTATTagaagtaatcttcttctttttttcttcttcttctgattgtaattattgttattaaaattatgttgttataagcaaattacctttctatataa
gi|12 : -TCAT-TCAAACTAAAGTCTT-AGAAGACGTCTATAGATTTAGATAATTTACTTTATGTTACAA-ATAAAGACAATTATT--TACAAATAT---------------A----GTAC--ATAGATt
gi|12 : atgtATTTACTTTATGTTACAAATA-A--AGACAATTATTT----A--CA-AATATAGTACATAGATATT------CATATTGAACTACCTTTTGTGTAAAACTTAAATACTTGTAATATCTCCGGATATGGAGGAATACAATTTTATAATAattcatattgaactaccttttgtgtaaaacttaaatacttgtaatatctccggatatggaggaatacaattttataata
gi|13 : atgttcattcaaactaaagtcttagaagacgtctatagatttagataGTAATTCATAACG--ATA-AATG-TATTAATTTCTATAGTGAAATAGAATTTATGTAAATTCTTAATGTTTGTAAAATCTCCAAATATGGAGGAATAAAAGATGATAATAA
gi|14 : CCGGTTTCCAAAGAATACAAAGGTCTTGGAAAAATTCAGAGTAACAGACGACAATCCCCTACAAGTGTAGACACGTTTCGTcaataatccat
gi|15 : tTACATACACTTTTATCTTCACTGTTAACATCAACGCAA-TTTCTAAATTTATAATCTTCAATGCTGCTTTCCTGAGAATA---------ATATtagtaaact
gi|16 : ATTTGAATAAA--TGAAATCTCTG--AAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAATtc
gi|2 : TTGTCAATGAATACAAACATCTTAGATTAATCCAGAATAACAGACGGAAATCCCC-GCAAATGTAGACACGGTGGGTCAAACTGCACATTGAACGTTGTTCTCGTat
gi|2 : catTACCTCACCTTACCCGCTCAGACATGGTTACTGGCTTATTTGGGTTCACGTCATTAGAAGCATAGAAATACTTACAGAAGTTATC-TGCCTTGGTATGCTATGCCGACTTAAAACAACAGACGTTACGTTACATTTATTCCT-AAGCATACATTACAAATGCTACAACAAGTGTAAAAAACGAAAAAAATGGCTTTATAAACGATATCCTACAAAGATTCAGAAAATACAAACGT------TACA-------------------AACCACATTTCCTGAAAAAG-AACC-ACGAAAAGGTA-TT-GTAAAAAA-CAA-TAA-TAAACTTCAAAGAGC---------------ACGAATAAACGCAAGCGATGATTGCTTCCGGTTTCAAAtaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatattacctcaccttacccgctcagacatggttactggcttatttgggttcacgtcattagaagcatagaaatacttacagaagttatctgccttggtatgctatgccgacttaaaacaacagacgttacgttacatttattcctaagcatacattacaaatgctacaacaagtgtaaaaaacgaaaaaaatggctttataaacgatatcctacaaagattcagaaaatacaaacgttacaaaccacatttcctgaaaaagaaccacgaaaaggtattgtaaaaaacaataataaacttcaaagagcacgaataaacgcaagcgatgattgcttccggtttcaaaaaacgtcttccatcgaatctatgacattcttggcaaatatgttgtgcatcaaaatcaaaccaaataaagaactgtttgacatgcgaggtacaatatacagatgaactatttcgtaattgtttttaaagtagctgtagtaggcatcattccacgtggttgcgtactggaataacctcaatattccaagtgacatatgcttatttctaagaagcaatacaaaatacattcaataactattcttgcttggatttgtagatacactgctaacttaaatgtcaacattaatgcaaatctcagaagctatgaactgtaacgctgctttcatgagaacagtatacgcttgcttataaatgtatttcttaataatttacatttaaagactgttattttaagaaaataaaacttgaaaaaggtacgattttaatttatcacattaaagattttcatgtatctttttggtgaaataacttaaatgtggatataaatcattcaaactagagttttaaaacgagacaacatatttaaatagtttaccttaaa
gi|2 : catttgtcaatgaatacaaacatcttagattaatccagaataacagacggaaatccccgcaaatgtagacacggtgggtcaaactgcacattgaacgttgttctcgttaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatatAAAAAACGTCTTCCATCGAATCTATGACATTCTTGGC-AAAT-ATGT--TGTGCATCAAAATCAAACCAAATAAAGAACTGTTTGACATGCGAGGTACA--ATATACAGATGAACTA-TTTCGTAATTGTTTTTAAA-----GTAGCTGTAGTAG-GCATCATTCCACGTGGTT-GCGTACTGGAATAACCTCAATATTC--------CAAGTGACATATGCTTATTT--CTAAGAAGCAATACAAAATACATTCA---ATAACTATTCTTGCTTGGATTTGTAGATACACTGCTAACTTAAATGTCAACATTAATGCAAATCTCAGAAGCTATGAACTGTAACGCTGCTTTCATGAGAACA---------GTATACGCTTGCTTATAAATGTATTTCTTAA---TAATTTACATT---TAA-AGACTG--TTAT---TT-------------TAA-GAAAATAAAA-C-TTGAAAAAG-GTACGATTTTAAT-TTATCACATTAAA--GATTTTC--ATGTATCTTTTTGGTGAAA---TAACTT-AAATGTGGAT-ATAAA-TCAT-TCAAACTAGAGTTTT-AAAACGAGACAACATATTTAAATAGTTTACCTTAAaaacgtcttccatcgaatctatgacattcttggcaaatatgttgtgcatcaaaatcaaaccaaataaagaactgtttgacatgcgaggtacaatatacagatgaactatttcgtaattgtttttaaagtagctgtagtaggcatcattccacgtggttgcgtactggaataacctcaatattccaagtgacatatgcttatttctaagaagcaatacaaaatacattcaataactattcttgcttggatttgtagatacactgctaacttaaatgtcaacattaatgcaaatctcagaagctatgaactgtaacgctgctttcatgagaacagtatacgcttgcttataaatgtatttcttaataatttacatttaaagactgttattttaagaaaataaaacttgaaaaaggtacgattttaatttatcacattaaagattttcatgtatctttttggtgaaataacttaaatgtggatataaatcattcaaactagagttttaaaacgagacaacatatttaaatagtttaccttaaa
gi|3 : catttgtcaatgaatacaaacatcttagattaatccagaataacagacggaaatccccgcaaatgtagacacggtgggtcaaactgcacattgaacgttgttctcgttaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatattacctcaccttacccgctcagacatggttactggcttatttgggttcacgtcattagaagcatagaaatacttacagaagttatctgccttggtatgctatgccgacttaaaacaacagacgttacgttacatttattcctaagcatacattacaaatgctacaacaagtgtaaaaaacgaaaaaaatggctttataaacgatatcctacaaagattcagaaaatacaaacgttacaaaccacatttcctgaaaaagaaccacgaaaaggtattgtaaaaaacaataataaacttcaaagagcacgaataaacgcaagcgatgattgcttccggtttcGTTGTCAAAGAATACAAACGTCTTAGTTTTATCCGGAATAACAGATGGAAATCCGCTGTAAATTTAGATACTGTGTGCCGAACCACCCGGGGAACGGTGTTCTCGTa
gi|3 : CCCCACCTTACCCATTCAGACA--GTCACCGGCTTACTTGGGTTCACATGATAAGAAGCATATATAGATCTACAAAAGTTATC-TTCCTTGGTGCGCTATACTGACATAAAGCAACAGATGTTACGGTCCTATTATT-CTTAACTAGACTTTACCAATGCAACAACAAGTGTACACAACG-GTAAAATGGCTTTAAAAACGATATCCTACAAAAAC------AAT-----CTTGAACAGTACATCGAATAATGCATATCATCAAGCACATTTCCTGCAAAAGAAA-T-ATGGAAAAGTATTT-GTAAAAAA-CAATT-A-TAAACTTCGAAGAGCAACAA-T-GGTCATTACGAATAAACGCAGACGATAACTGCTTTCGGTTTCGAAGCTTTCACAATCAGCTATC--------------TTGG---------------GAACTCGTCTTCCATTGAATCCATGACTTTCTTGGCCAAATTATGTCATGTGCACCAAAATCAAACCAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttatccccaccttacccattcagacagtcaccggcttacttgggttcacatgataagaagcatatatagatctacaaaagttatcttccttggtgcgctatactgacataaagcaacagatgttacggtcctattattcttaactagactttaccaatgcaacaacaagtgtacacaacggtaaaatggctttaaaaacgatatcctacaaaaacaatcttgaacagtacatcgaataatgcatatcatcaagcacatttcctgcaaaagaaatatggaaaagtatttgtaaaaaacaattataaacttcgaagagcaacaatggtcattacgaataaacgcagacgataactgctttcggtttcgaagctttcacaatcagctatcttgggaactcgtcttccattgaatccatgactttcttggccaaattatgtcatgtgcaccaaaatcaaacca
gi|4 : gttgtcaaagaatacaaacgtcttagttttatccggaataacagatggaaatccgctgtaaatttagatactgtgtgccgaaccacccggggaacggtgttctcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttatTTCTAACGGACTTATGCTCGTGT--CTACGAAACGGTATTAAAGACGCTCAGGTACTACTATTCTTGCTTGGGTATGTAGATATACTTTTATCTTCACTGTTAACATTAAAGTAAATCTCAGAATTCATGAACTTTAATGCTGCTTTCCTGAAAACT---------ATATGCGTTTGCTAATAAATGTATTTCTAGA---TGATTTACATT---TAA-AGAA-A--AT-CA--AA-------------AAA-GGAA-CAA-----T-------G-ATACGATTTTGATAGAAACACATTTAA--CA-TTTC--ATGTTTCGTTTCTGCTAAA---TAACTT-AAATGTGCAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ACAA---GACAACATCTTTAAATAATTTACTTAAATTTTCAA-ATAAAGACAAGTAAT--A----ATAT---------------TTGCAGTAC--ACCGATGATAAAACCAATGACTATGT-----AAACG-AATA-ATTATTATTTTGTAATTCAGAATGTGATA-ATTG-TATT------TATATTGTAATATTATTTGTATAAAATTTAAATGTTTATACAATAT-CAGAAATGGAGGAGTAAAA
gi|5 : GTAGCAGCAATAT-ACTTCAATTCACGAGGATAGAATACTGCAACTTTCTCAATATTCA--GTTTCCAAGTGAACTGTGTTCATTT--CTACAAAATAAAACCAAAGACAATCA---ATTATTATTCTTACTTGGATATGTGGATACAATTTCATCGTCACTGCCAACATCCAAGTAAATCTCAGAA--------CTTCAACGAGGCTTTCCTGAGAACA---------ACATGCGCATGTT------T-TGTGTTTAAAGTCTG-TTTATTTT---TAAGATAACGGAACATA--CA-------------ACA-AGAAT--------------------GTGACTTTGATATAGACACATTAAAACCGTTGCCGCATGTTTCGTTTCGTGGAAA---TGCCCT-AAAGATGTTT-ATAAA-TCAT-TCAAACTAGATTTTT-AGAAAACGACAATATATTTAAATAATTTACTTTATATTAC------AAGAC-----TT--T----ATAT------------------------------------------TT---TTTAT-----AAA----------TCTTATTGTG------ATAATTT--TA-ATTA-TATT------AATATTGAAA-----------TAAAACATAAATGTTTGTATACTCTACAGAAATGGAGGAATAATAGTTGATtg
gi|6 : aTGCTAATATCTAAGCAAATCTCAGAATCTATCAACTTCATTGTTGTTTTCATAAGAACATAATTTATTATATACGCTTTTTAACAAATATGTGTTTA-----TGGTTTATACTAATTGA-AGAATA--ATATAAGTACTGATGTTGAACGAAACGAAATTGAAA-CAT-------GTATATGATTTTAATATAAACACATTAAA--TATTTTC--ATA-------TCCGTGAAATATTAACCT-AAATG---ATAATTAA-TTTTATCAAACTAGAATTTA-ACACCACGACATTAGTCTTAACTTATAGACGTTAAATT-CAATATAAATATACTAATG--T----ATATTAACACTGATGCTACC----GTATCAACTGATGAT--AACCATTGATTTTAT-----AAAGA-A--A-A
gi|7 : ACGATTTTAATATAAACACATAAAA--CAC--------GTTTAGTTTCAGTGAAA---TTACTT-AAATGTGAAT-ATAAA-TCAT-TCACACTAGAGTTG--GCAACACGTCAACAGATTTAAATAATTTACTTTAATTTATAA-GTAAAGACAATTATTATT----ATTTG--------------CA---GTAC--ACCGGTGATAAAACCATTGACTTTTT-----AAAAA-A--C-AATATTATTTTGTAACTCCTAATGTGATA-ATTA-TATC------TATATTGTGATATCATTTGTATAAAATACAAATATTTGTTTAATCTCCAGTTATGGGAGAATAAggttat
gi|8 : gcacacgattgctatttattaaatctatttctgaaaggtaatctatcggcatagaagaactcttcaaaAACATTACATTGAGCAACTCATGTGTTCAACAACGTTTTCTTGAAAA-----C-A----------------AAAAAA-------A-TACATTTCGAACAGCATT-AAT-GGGAATTACGAATACGCGCAGACGCTGATTGCTTCCGGTTTTGAAGGGTCTACACTTGGCTCTCTCC-GGGAATC-GTTTGGCCCA-CTGCACTGGAGTACACGTCTTCCATAGACTTCGTGACGTTCTTGGCCATATTATGT--TGTA-AGCAAAATC----------AAGAACTGTGTAACATGTCAGGCACA--ATATACATATGAACTG-TTCCATAAA-G---TCAAA----TGTAG
gi|9 : t--CATTTTC--ATGTTTTGTTTCAGTGAAA---TGACTTAAAATG-GTTT-ATAAG-TCAT-TCAAACTAAAGTTTTGAAAAC-CGACACTATATTTGAATAATTTACTTTATATTACAA-ATAAAG------ATT--T----ACAT---------------CTGTAATAC--AC-----ATATAACCAGAGAATTTAT-----AAAAA-A------TATTGTTTTATGATTTATATTGTGATA-ATTG-TATT------TATATT------TTATATGTGTAAAATTTAAATGCTTGTAAAATGTCTAGAAATAGAGTATTAAAAGTTGAtttttgtgctgttgcacagtaataaa
blockSeqs : A T A T T G . C T T C T GC AA G T A G G TC TG CA C A GAACCAC ATTT CAATAA AACAAT TC CA TCCGGGAATCGTTTGGCCCA CTG AA A C T CA C T A TT CT A T T G AACTT C G AG T T G A A G TTT T C AA T GGT T A TAATTTATT T G AAGTC A AAT G CGGA AAGTACTGATGTTGAACGAAACGAAATTGAAACATGT T T AC GC G TAT A T GC A A A G C CA G T T AATT TACAA TAACACTGATGCTACCG CA C TA A GTTAC CGAATAAT T T T A C A AATTTC A T C G T
blockSeqs : T T C G . T . T G A . . CT G A . . . T TT CT GT C C GAAATAT ATT CAATTA ATTAAT GA TG TTGG . CT T C T . C C A GT . . . T T T T A G A T T A C A A C C . A . G G . A G AA A . . TG TTTAAGAAAATAAAACTTGAAAAAG T T . . T . . T GA . . . . G GA G G . AAGT ATT TTGCAG . A AA G . TAAAGAC T T G G . . . A T A G C
blockSeqs : T . . . . . A G CA . A . . CA G . . . . G . A . . . . . . A . T T A A . A T . C T . C . T G . A A GA G . . TA AAAAAAGGAACAATG T C . . G . . T CA . . . . A CG T T . ACTA T CTGTAA . C AA A . AAACAA T C T G . . . T T T A T
blockSeqs : A . . C . T C . . . . . . . A ACAACAAGAAT . T . . C . . T TT . . . . C AA T A . AATT A GCAG . T AT A . AAA T T T G . . . A T C A T
blockSeqs : . . . T . . A . . T AA . . . . G CA T A . . T AG . C . T . . . . T . . . . T . T A A
blockSeqs : . . A . . . TT . . . . C CA G T . . T . . . . A . . . . . . . . . . . G A
blockSeqs : . . . A . . . . C C G A . . T . . . . . . T
blockSeqs : . . . A . T
blockSeqCons : AAGAAGGNAACAAAAAG**************************** GCAG***************** CAAAAA****
originalCons : CCGGTTGTCAAAGAATACAAACGTCTTGGANTAATCCAGAATAACAGACGGAAATCCCCTGCAAATGTAGACACGGTGCGTCGAACTACGCGGGGAACGNTGTTCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCCACCTTACCCGCTCAGACATGGTCACCGGCTTACTTGGGTTCACGTCATTAGAAGCATANATAGACTTACAAAAGTTATC-TTCCTTGGTACGCTATGCCGACTTAAAGCAACAGACGTTACGNTCCANTTATTCCTCAANCAGACTTTACCAATGCAACAACAAGTGTACAAAACGAGAAAAATGGCTTTATAAACGATATCCTACAAANACTCAGAAAATACAAACTTGAACANTACATCGAGCAATTCATGTNATCAACNACATTTCCTGNAAAAG-AA-C-ACGGAAAAGTA-TT-GTAAAAAA-CAA-T-A-TAAACTTCGAAGAGCANC-A-T-GGTNATTACGAATAAACGCAGACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATCGGCTATCTCC-GGGA--C-GTTTGG-CCA-CTGCACTGGAGAACNCGTCTTCCATCGAATCCATGACGTTCTTGGCCAAATTATGT--TGTGCANCAAAATCAAACCAAATAAAGAACTGTNTAACATGCGAGGCACA--ATATACAGATGAACTG-TTTCATAAA-GTTTTCAAA----TGTAGCNGTAATAA-ACNTCAATCCACGNGGATAGCGTACTGGAACTNTCTCAATATTCA--GTTTCCAAGTGACTTATGCTCATTT--CTACGAAACAGTACCAAAGACATTCA---ATTACTATTCTTGCTTGGATATGTAGATACACTTTTATCTTCACTGTTAACATCAAAGCAAATCTCAGAATTTATGAACTTCAACGCTGCTTTCCTGAGAACA---------ATATACGCTTGTTAATAAATGTATGTCTAAA---TGATTTACATT---TAA-AGAATG--ATATA--TA-------------AAA-GGAATTAAAA-C-T-------G-ATACGATTTTGATATAAACACATTAAA--CATTTTC--ATGTTTCGTTTCGGTGAAA---TAACTT-AAATGTGNAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ACAACACGACAACAGATTTAAATAATTTACTTTAANTTACAA-ATAAAGACAATTATT--T----ATAT---------------C----GTAC--ACCGATGATAAAACCATTGACTTTAT-----AAANA-A--A-ACTATTATTTTGTAATTCATAATGTGATA-ATTG-TATT------TATATTGNAATATTATTTGTGTAAAATTTAAATGTTTGTAAAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAAT
finalCons : CCGGTTGTCAAAGAATACAAACGTCTTGGANTAATCCAGAATAACAGACGGAAATCCCCTGCAAATGTAGACACGGTGCGTCGAACTACGCGGGGAACGNTGTTCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCCACCTTACCCGCTCAGACATGGTCACCGGCTTACTTGGGTTCACGTCATTAGAAGCATANATAGACTTACAAAAGTTATC-TTCCTTGGTACGCTATGCCGACTTAAAGCAACAGACGTTACGNTCCANTTATTCCTCAANCAGACTTTACCAATGCAACAACAAGTGTACAAAACGAGAAAAATGGCTTTATAAACGATATCCTACAAANACTCAGAAAATACAAACTTGAACANTACATCGAGCAATTCATGTNATCAACNACATTTCCTGNAAAAG-AA-C-ACGGAAAAGTA-TT-GTAAAAAA-CAA-T-A-TAAACTTCGAAGAGCANC-A-T-GGTNATTACGAATAAACGCAGACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATCGGCTATCTCC-GGGA--C-GTTTGG-CCA-CTGCACTGGAGAACNCGTCTTCCATCGAATCCATGACGTTCTTGGCCAAATTATGT--TGTGCANCAAAATCAAACCAAATAAAGAACTGTNTAACATGCGAGGCACA--ATATACAGATGAACTG-TTTCATAAA-GTTTTCAAA----TGTAGCNGTAATAA-ACNTCAATCCACGNGGATAGCGTACTGGAACTNTCTCAATATTCA--GTTTCCAAGTGACTTATGCTCATTT--CTACGAAACAGTACCAAAGACATTCA---ATTACTATTCTTGCTTGGATATGTAGATACACTTTTATCTTCACTGTTAACATCAAAGCAAATCTCAGAATTTATGAACTTCAACGCTGCTTTCCTGAGAACA---------ATATACGCTTGTTAATAAATGTATGTCTAAA---TGATTTACATT---TAA-AGAATG--ATATAAGAAGGNAACAAAAAG----------------------------ATACGATTTTGATATAAACACATTAAA--CATTTTC--ATGTTTCGTTTCGGTGAAA---TAACTT-AAATGTGNAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ACAACACGACAACAGATTTAAATAATTTACTTTAANTTACAA-ATAAAGACAATTATT--T----ATATGCAG-----------------TAC--ACCGATGATAAAACCATTGACTTTAT-----AAACAAAAA----TATTATTTTGTAATTCATAATGTGATA-ATTG-TATT------TATATTGNAATATTATTTGTGTAAAATTTAAATGTTTGTAAAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAAT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11 11 222222222 11111 222222222 33333333 44444444444444444444444 11 11 1 1 22222 11 222 11 111 222222222 111111 111 0000000000000000000000000000000000000000000000000000 3333333333333333333333333333333333 11111 111111 111111
lowQualScore : 1 3 0 0 3 1 7 1 3 3 1 1 2 2 33 99 1 7 7 6 4 33 00 33 0 88 1 1 222222222 0 0 44444 444444444 22222222 77 44 77777777777777777777777 666 11 0 0 4 2 3 33 2 1 3 44 0 33 0 0 0 3 3 44444 1 7 11 1 1 1 7 2 1 333 1 3 11 0 3 0 444 1 0 666666666 6 0 555555 3 444 0 66 1111111111111111111111111111111111111111111111111111 1 77 0 77 1 888 5 3 33 5 4 4 4 1 11 1 1 0 5 0 5555555555555555555555555555555555 77 3 3 4 22222 55 6 5 5 000000 6 1 3 3 5 5 666666 99 0 0 1 0 0
lowQualScore : . . . . . . . . . . . . . . .. .. . . . . . .. .. .. . .. . . ......... . . ..... ......... ........ .. .. ....................... ... .. . . . . . .. . . . .. . .. . . . . . ..... . . .. . . . . . . ... . . .. . . . ... . . ......... . . ...... . ... . .. .................................................... . .. . .. . ... . . .. . . . . . .. . . . . . .................................. .. . . . ..... .. . . . ...... . . . . . . ...... .. . . . . .
lowQualScore : 0 2 2 7 7 0 3 0 3 7 0 0 0 0 00 33 0 3 3 7 5 55 55 88 2 00 0 0 000000000 2 8 88888 555555555 00000000 55 33 00000000000000000000000 333 22 2 8 2 5 2 88 5 0 2 22 2 88 0 8 0 2 0 55555 0 0 22 0 0 2 0 5 0 555 4 2 00 8 2 6 000 0 7 777777777 0 8 000000 8 000 8 22 2222222222222222222222222222222222222222222222222222 7 99 1 99 7 888 0 2 22 0 4 4 4 1 99 1 0 4 0 1 7777777777777777777777777777777777 99 0 5 1 55555 44 5 0 0 888888 7 7 9 6 7 7 444444 33 5 4 2 5 8
consensus : CCGGTTGTCAAAGAATACAAACGTCTTGGANTAATCCAGAATAACAGACGGAAATCCCCTGCAAATGTAGACACGGTGCGTCGAACTACGCGGGGAACGNTGTTCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCCACCTTACCCGCTCAGACATGGTCACCGGCTTACTTGGGTTCACGTCATTAGAAGCATANATAGACTTACAAAAGTTATC-TTCCTTGGTACGCTATGCCGACTTAAAGCAACAGACGTTACGNTCCANTTATTCCTCAANCAGACTTTACCAATGCAACAACAAGTGTACAAAACGAGAAAAATGGCTTTATAAACGATATCCTACAAANACTCAGAAAATACAAACTTGAACANTACATCGAGCAATTCATGTNATCAACNACATTTCCTGNAAAAG-AA-C-ACGGAAAAGTA-TT-GTAAAAAA-CAA-T-A-TAAACTTCGAAGAGCANC-A-T-GGTNATTACGAATAAACGCAGACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATCGGCTATCTCC-GGGA--C-GTTTGG-CCA-CTGCACTGGAGAACNCGTCTTCCATCGAATCCATGACGTTCTTGGCCAAATTATGT--TGTGCANCAAAATCAAACCAAATAAAGAACTGTNTAACATGCGAGGCACA--ATATACAGATGAACTG-TTTCATAAA-GTTTTCAAA----TGTAGCNGTAATAA-ACNTCAATCCACGNGGATAGCGTACTGGAACTNTCTCAATATTCA--GTTTCCAAGTGACTTATGCTCATTT--CTACGAAACAGTACCAAAGACATTCA---ATTACTATTCTTGCTTGGATATGTAGATACACTTTTATCTTCACTGTTAACATCAAAGCAAATCTCAGAATTTATGAACTTCAACGCTGCTTTCCTGAGAACA---------ATATACGCTTGTTAATAAATGTATGTCTAAA---TGATTTACAT---TTAAAGAATGATA---TAA-----------GAAN--GAA---AC---AAAA---A--GA-----ATACGATTTTGATATAAACACATTAAA--CATT--TTCATGTTTCGTTTCGGTGAAA---TAACTT-AAATGTGNAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ACAACACGACAACAGATTTAAATAATTTACTTTAANTTACAA-ATAAAGACAATTATT--TAT--A--T--GCA-----------GTAC--ACCGATGATAAAACCATTGACTTTAT-----AA-ANA-AA-A----A-TA-TTATTTTGTAATTCATAATGTGATA-ATTG-TATT------TATATTGTAATATTATTTGTATAAAATTTAAATGTTTGTAAAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAAT
Reference ( family-1139 ) : CCGGTTGTCAAAGAATACAAACGTCTTGGANTAATCCAGAATAACAGACGGAAATCCCCTGCAAATGTAGACACGGTGCGTCGAACTACGCGGGGAACGNTGTTCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCCCACCTTACCCGCTCAGACATGGTCACCGGCTTACTTGGGTTCACGTCATTAGAAGCATANATAGACTTACAAAAGTTATC-TTCCTTGGTACGCTATGCCGACTTAAAGCAACAGACGTTACGNTCCANTTATTCCTCAANCAGACTTTACCAATGCAACAACAAGTGTACAAAACGAGAAAAATGGCTTTATAAACGATATCCTACAAANACTCAGAAAATACAAACTTGAACANTACATCGAGCAATTCATGTNATCAACNACATTTCCTGNAAAAG-AA-C-ACGGAAAAGTA-TT-GTAAAAAA-CAA-T-A-TAAACTTCGAAGAGCANC-A-T-GGTNATTACGAATAAACGCAGACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATCGGCTATCTCC-GGGA--C-GTTTGG-CCA-CTGCACTGGAGAACNCGTCTTCCATCGAATCCATGACGTTCTTGGCCAAATTATGT--TGTGCANCAAAATCAAACCAAATAAAGAACTGTNTAACATGCGAGGCACA--ATATACAGATGAACTG-TTTCATAAA-GTTTTCAAA----TGTAGCNGTAATAA-ACNTCAATCCACGNGGATAGCGTACTGGAACTNTCTCAATATTCA--GTTTCCAAGTGACTTATGCTCATTT--CTACGAAACAGTACCAAAGACATTCA---ATTACTATTCTTGCTTGGATATGTAGATACACTTTTATCTTCACTGTTAACATCAAAGCAAATCTCAGAATTTATGAACTTCAACGCTGCTTTCCTGAGAACA---------ATATACGCTTGTTAATAAATGTATGTCTAAA---TGATTTACAT---TTAAAGAATGATA---TAA-----------GAAG--GNA---AC---AAAA---A--G------ATACGATTTTGATATAAACACATTAAA--CATT--TTCATGTTTCGTTTCGGTGAAA---TAACTT-AAATGTGNAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ACAACACGACAACAGATTTAAATAATTTACTTTAANTTACAA-ATAAAGACAATTATT--TAT--A--T--GCA-----------GTAC--ACCGATGATAAAACCATTGACTTTAT-----AA-ACA-AA-A----A-TA-TTATTTTGTAATTCATAATGTGATA-ATTG-TATT------TATATTGNAATATTATTTGTGTAAAATTTAAATGTTTGTAAAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAAT
gi|1 : CCAGTCGTCAAAGAATACAAACATCTTGGAATAATCCAGAATAACAGACGGAACTCCCCTGCAAATGTAGATATGGTGCGTCAAACTACGCGGGGATCGCTGTTCTCGT
gi|1 : TACCCCATCTTACCCGCTCAGACATGGTCACCGGTTTACTTGGGTTTACGTCATTAGAAGCATACATAGACTTACAAAAGTTATCGTTCCTTGGTACGATTTGTAGACTTAAAGCAACAGACAATACGCTCCAGCTATTTCTCAAT-AGACTTTACCAATGCAAAAACATGTGTACAAAACGA-AACAATGGCTTTATAAACGATATCCTACAAATACTCAGAAAATACAAACTGGAACAATATATCGAGCAATTCATGTTATCAACAACATTTCCTGCAAAAG-AA-CCATGGAAAAGTG-TTTGTAAAAAAACAA-T-AATAAACTTCGAAGAACAGC-A-TTGGTTATTACGAATTAACGCAAACGATGATTGCTTCCGGTTTCGAAGGGTCCACAATAAACTATCTCCTGGAA--CAGTCTGG-CTAACTGCATTAGAGAATCCGTCTTCCATCGAGTCCATGACATTCTTAGGCAAATTATGC--TGTGCAGCAAAACCAAACCAAATAAAGAACTGTTTAACATGCAAGGCACA--ATATACAGATGAACTG-TTTCATAAA-GTTTTTGAT----TGTAGCAGTAATAA-ACATCAATCCACGAGGATGGCGTACTGGAACTCTCTCAATATTCA--GTTTCCAAGTGATTTATGCTCATTT--C-----AACAGTACCAAAGACATTCA---ATTACTATTCTTGATTGGATATGTAGATATACTTTTATCTTCACTGTTAACAGTAAAGCAAATCTCAGAATTTATGAACTTTAATGCTGCTTTCCTGAGATCA---------ATATACGCTTGTTAATAAATGCACGTCTATA---TGATTTACAT---GTAGAGAATGATA---TTA-----------AAAT--GAA---TT---AAGA---CCTG------AAACAA----GATATACACACTTTAAA--CATT--TTCATGTTTCGTTTCGGTGAAA---TAACCT-AAATGTGCAT-ATAAA-TCAT-TCAAACTAGAGTCCT-ACAACAAGACAACAGATTTAAATAATTTACTTTAATTCACGA-ATAAAGACAGTTATT--TAT--A--T---C-------------TAC--ATCGATGATAAAACCATAGACTTTGT-----AA-ATATTA-A----C-TA-TTATTTTGTAATTCACAATGTGATC-ATAG-TATT------TATATTGTAATATTATATGTATAAAATCAAAATGTTTGTAAAATCTCCAGAAATGGGGGAATAAAAGTTGATAATAATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacctaccccatcttacccgctcagacatggtcaccggtttacttgggtttacgtcattagaagcatacatagacttacaaaagttatcgttccttggtacgatttgtagacttaaagcaacagacaatacgctccagctatttctcaatagactttaccaatgcaaaaacatgtgtacaaaacgaaacaatggctttataaacgatatcctacaaatactcagaaaatacaaactggaacaatatatcgagcaattcatgttatcaacaacatttcctgcaaaagaaccatggaaaagtgtttgtaaaaaaacaataataaacttcgaagaacagcattggttattacgaattaacgcaaacgatgattgcttccggtttcgaagggtccacaataaactatctcctggaacagtctggctaactgcattagagaatccgtcttccatcgagtccatgacattcttaggcaaattatgctgtgcagcaaaaccaaaccaaataaagaactgtttaacatgcaaggcacaatatacagatgaactgtttcataaagtttttgattgtagcagtaataaacatcaatccacgaggatggcgtactggaactctctcaatattcagtttccaagtgatttatgctcatttcaacagtaccaaagacattcaattactattcttgattggatatgtagatatacttttatcttcactgttaacagtaaagcaaatctcagaatttatgaactttaatgctgctttcctgagatcaatatacgcttgttaataaatgcacgtctatatgatttacatgtagagaatgatattaaaatgaattaagacctgaaacaagatatacacactttaaacattttcatgtttcgtttcggtgaaataacctaaatgtgcatataaatcattcaaactagagtcctacaacaagacaacagatttaaataatttactttaattcacgaataaagacagttatttatatctacatcgatgataaaaccatagactttgtaaatattaactattattttgtaattcacaatgtgatcatagtatttatattgtaatattatatgtataaaatcaaaatgtttgtaaaatctccagaaatgggggaataaaagttgataataat
gi|10 : ccagtcgtcaaagaatacaaacatcttggaataatccagaataacagacggaactcccctgcaaatgtagatatggtgcgtcaaactacgcggggatcgctgttctcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaccGAAA---TAACTT-AGATGTGGCT-ATAAAATCAT-TCGAACTAGAGAATT-ACGACACGACAACGGATTTAAATAGTTTACTTTAATTTACAA-GTA-----------T--T-------T--GCA-----------CTAC--ACCGATGATTAAACCATTGACGTT-T-----AA-AAA-AA-A----A-
gi|11 : AAATAATAAAATGTA-AACATGTGAGGCACACTATATACAGATGAAAAAATTGAATGTA-GTTGTCAAAAACTTGTCACCATA-TAAGACTGTAATTCACGTGGGTAGAGAACTGGACTTGTCTGAATATTTTTTGTTTCCAGGTGATTTATA---ATTAAACTATGCAACAGTACCAAATACATTCA---GCTACTATTgaagtaatcttcttctttttttcttcttcttctgattgtaattattgttattaaaattatgttgttataagcaaattacctttctatataa
gi|12 : -TCAT-TCAAACTAAAGTCTT-AGAAGACGTCTATAGATTTAGATAATTTACTTTATGTTACAA-ATAAAGACAATTATT--TACAAA--T--ATA-----------GTAC--ATAGATt
gi|12 : atgtATTTACTTTATGTTACAA-ATA-AA-G----A-CAATTATTT----A--CA-AATATAGTACATAGATATT------CATATTGAACTACCTTTTGTGTAAAACTTAAATACTTGTAATATCTCCGGATATGGAGGAATACAATTTTATAATAattcatattgaactaccttttgtgtaaaacttaaatacttgtaatatctccggatatggaggaatacaattttataata
gi|13 : atgttcattcaaactaaagtcttagaagacgtctatagatttagataGTAATTCATAACG--ATA-AATG-TATTAATTTCTATAGTGAAATAGAATTTATGTAAATTCTTAATGTTTGTAAAATCTCCAAATATGGAGGAATAAAAGATGATAATAA
gi|14 : CCGGTTTCCAAAGAATACAAAGGTCTTGGAAAAATTCAGAGTAACAGACGACAATCCCCTACAAGTGTAGACACGTTTCGTcaataatccat
gi|15 : tTACATACACTTTTATCTTCACTGTTAACATCAACGCAA-TTTCTAAATTTATAATCTTCAATGCTGCTTTCCTGAGAATA---------ATATtagtaaact
gi|16 : ATTTGAATAAA--TGAAATCTCTG--AAATCTCCAGAAATGGAGGAATAAAAGTTGATAATAATtc
gi|2 : TTGTCAATGAATACAAACATCTTAGATTAATCCAGAATAACAGACGGAAATCCCC-GCAAATGTAGACACGGTGGGTCAAACTGCACATTGAACGTTGTTCTCGTat
gi|2 : catTACCTCACCTTACCCGCTCAGACATGGTTACTGGCTTATTTGGGTTCACGTCATTAGAAGCATAGAAATACTTACAGAAGTTATC-TGCCTTGGTATGCTATGCCGACTTAAAACAACAGACGTTACGTTACATTTATTCCT-AAGCATACATTACAAATGCTACAACAAGTGTAAAAAACGAAAAAAATGGCTTTATAAACGATATCCTACAAAGATTCAGAAAATACAAACGT------TACA-------------------AACCACATTTCCTGAAAAAG-AACC-ACGAAAAGGTA-TT-GTAAAAAA-CAA-TAA-TAAACTTCAAAGAGC---------------ACGAATAAACGCAAGCGATGATTGCTTCCGGTTTCAAAtaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatattacctcaccttacccgctcagacatggttactggcttatttgggttcacgtcattagaagcatagaaatacttacagaagttatctgccttggtatgctatgccgacttaaaacaacagacgttacgttacatttattcctaagcatacattacaaatgctacaacaagtgtaaaaaacgaaaaaaatggctttataaacgatatcctacaaagattcagaaaatacaaacgttacaaaccacatttcctgaaaaagaaccacgaaaaggtattgtaaaaaacaataataaacttcaaagagcacgaataaacgcaagcgatgattgcttccggtttcaaaaaacgtcttccatcgaatctatgacattcttggcaaatatgttgtgcatcaaaatcaaaccaaataaagaactgtttgacatgcgaggtacaatatacagatgaactatttcgtaattgtttttaaagtagctgtagtaggcatcattccacgtggttgcgtactggaataacctcaatattccaagtgacatatgcttatttctaagaagcaatacaaaatacattcaataactattcttgcttggatttgtagatacactgctaacttaaatgtcaacattaatgcaaatctcagaagctatgaactgtaacgctgctttcatgagaacagtatacgcttgcttataaatgtatttcttaataatttacatttaaagactgttattttaagaaaataaaacttgaaaaaggtacgattttaatttatcacattaaagattttcatgtatctttttggtgaaataacttaaatgtggatataaatcattcaaactagagttttaaaacgagacaacatatttaaatagtttaccttaaa
gi|2 : catttgtcaatgaatacaaacatcttagattaatccagaataacagacggaaatccccgcaaatgtagacacggtgggtcaaactgcacattgaacgttgttctcgttaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatatAAAAAACGTCTTCCATCGAATCTATGACATTCTTGGC-AAAT-ATGT--TGTGCATCAAAATCAAACCAAATAAAGAACTGTTTGACATGCGAGGTACA--ATATACAGATGAACTA-TTTCGTAATTGTTTTTAAA-----GTAGCTGTAGTAG-GCATCATTCCACGTGGTT-GCGTACTGGAATAACCTCAATATTC--------CAAGTGACATATGCTTATTT--CTAAGAAGCAATACAAAATACATTCA---ATAACTATTCTTGCTTGGATTTGTAGATACACTGCTAACTTAAATGTCAACATTAATGCAAATCTCAGAAGCTATGAACTGTAACGCTGCTTTCATGAGAACA---------GTATACGCTTGCTTATAAATGTATTTCTTAA---TAATTTACAT---TTAAAGACTGTTATTTTAA-----------GAAAATAAA---ACTTGAAAA---A--G------GTACGATTTTAAT-TTATCACATTAAA--GATT--TTCATGTATCTTTTTGGTGAAA---TAACTT-AAATGTGGAT-ATAAA-TCAT-TCAAACTAGAGTTTT-AAAACGAGACAACATATTTAAATAGTTTACCTTAAaaacgtcttccatcgaatctatgacattcttggcaaatatgttgtgcatcaaaatcaaaccaaataaagaactgtttgacatgcgaggtacaatatacagatgaactatttcgtaattgtttttaaagtagctgtagtaggcatcattccacgtggttgcgtactggaataacctcaatattccaagtgacatatgcttatttctaagaagcaatacaaaatacattcaataactattcttgcttggatttgtagatacactgctaacttaaatgtcaacattaatgcaaatctcagaagctatgaactgtaacgctgctttcatgagaacagtatacgcttgcttataaatgtatttcttaataatttacatttaaagactgttattttaagaaaataaaacttgaaaaaggtacgattttaatttatcacattaaagattttcatgtatctttttggtgaaataacttaaatgtggatataaatcattcaaactagagttttaaaacgagacaacatatttaaatagtttaccttaaa
gi|3 : catttgtcaatgaatacaaacatcttagattaatccagaataacagacggaaatccccgcaaatgtagacacggtgggtcaaactgcacattgaacgttgttctcgttaataatctgtggtatcgctagtaacggtatcaaccccataacggcagcaaaactttacacatcgatgttcgtgcctcgcacgatgttttgttgtgaactatagaatagcataacacaaactgacatgactcacctagaagcttcacagcatatctgcttaaaactcagccagatattacctcaccttacccgctcagacatggttactggcttatttgggttcacgtcattagaagcatagaaatacttacagaagttatctgccttggtatgctatgccgacttaaaacaacagacgttacgttacatttattcctaagcatacattacaaatgctacaacaagtgtaaaaaacgaaaaaaatggctttataaacgatatcctacaaagattcagaaaatacaaacgttacaaaccacatttcctgaaaaagaaccacgaaaaggtattgtaaaaaacaataataaacttcaaagagcacgaataaacgcaagcgatgattgcttccggtttcGTTGTCAAAGAATACAAACGTCTTAGTTTTATCCGGAATAACAGATGGAAATCCGCTGTAAATTTAGATACTGTGTGCCGAACCACCCGGGGAACGGTGTTCTCGTa
gi|3 : CCCCACCTTACCCATTCAGACA--GTCACCGGCTTACTTGGGTTCACATGATAAGAAGCATATATAGATCTACAAAAGTTATC-TTCCTTGGTGCGCTATACTGACATAAAGCAACAGATGTTACGGTCCTATTATT-CTTAACTAGACTTTACCAATGCAACAACAAGTGTACACAACG-GTAAAATGGCTTTAAAAACGATATCCTACAAAAAC------AAT-----CTTGAACAGTACATCGAATAATGCATATCATCAAGCACATTTCCTGCAAAAGAAA-T-ATGGAAAAGTATTT-GTAAAAAA-CAATT-A-TAAACTTCGAAGAGCAACAA-T-GGTCATTACGAATAAACGCAGACGATAACTGCTTTCGGTTTCGAAGCTTTCACAATCAGCTATC--------------TTGG---------------GAACTCGTCTTCCATTGAATCCATGACTTTCTTGGCCAAATTATGTCATGTGCACCAAAATCAAACCAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttatccccaccttacccattcagacagtcaccggcttacttgggttcacatgataagaagcatatatagatctacaaaagttatcttccttggtgcgctatactgacataaagcaacagatgttacggtcctattattcttaactagactttaccaatgcaacaacaagtgtacacaacggtaaaatggctttaaaaacgatatcctacaaaaacaatcttgaacagtacatcgaataatgcatatcatcaagcacatttcctgcaaaagaaatatggaaaagtatttgtaaaaaacaattataaacttcgaagagcaacaatggtcattacgaataaacgcagacgataactgctttcggtttcgaagctttcacaatcagctatcttgggaactcgtcttccattgaatccatgactttcttggccaaattatgtcatgtgcaccaaaatcaaacca
gi|4 : gttgtcaaagaatacaaacgtcttagttttatccggaataacagatggaaatccgctgtaaatttagatactgtgtgccgaaccacccggggaacggtgttctcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttatTTCTAACGGACTTATGCTCGTGT--CTACGAAACGGTATTAAAGACGCTCAGGTACTACTATTCTTGCTTGGGTATGTAGATATACTTTTATCTTCACTGTTAACATTAAAGTAAATCTCAGAATTCATGAACTTTAATGCTGCTTTCCTGAAAACT---------ATATGCGTTTGCTAATAAATGTATTTCTAGA---TGATTTACAT---TTAAAGAA-AAT----CAA-----------AAAA--GGA---AC-----AA---T--G------ATACGATTTTGATAGAAACACATTTAA--CA-T--TTCATGTTTCGTTTCTGCTAAA---TAACTT-AAATGTGCAT-ATAAA-TCAT-TCAAACTAGAGTTTT-ACAA---GACAACATCTTTAAATAATTTACTTAAATTTTCAA-ATAAAGACAAGTAATAATAT--T--T--GCA-----------GTAC--ACCGATGATAAAACCAATGACTATGT-----AA-ACG-AATA----ATTA-TTATTTTGTAATTCAGAATGTGATA-ATTG-TATT------TATATTGTAATATTATTTGTATAAAATTTAAATGTTTATACAATAT-CAGAAATGGAGGAGTAAAA
gi|5 : GTAGCAGCAATAT-ACTTCAATTCACGAGGATAGAATACTGCAACTTTCTCAATATTCA--GTTTCCAAGTGAACTGTGTTCATTT--CTACAAAATAAAACCAAAGACAATCA---ATTATTATTCTTACTTGGATATGTGGATACAATTTCATCGTCACTGCCAACATCCAAGTAAATCTCA--------GAACTTCAACGAGGCTTTCCTGAGAACA---------ACATGCGCATGTT--T-----TGTGTTTAAAGTCTG-TTTATTT---TTAA-----GATA------------------ACG--GAACATAC---AACA---A--GA-----ATGTGACTTTGATATAGACACATTAAAACCGTTGCCGCATGTTTCGTTTCGTGGAAA---TGCCCT-AAAGATGTTT-ATAAA-TCAT-TCAAACTAGATTTTT-AGAAAACGACAATATATTTAAATAATTTACTTTATATTAC------AAGAC-----TT--TAT--A--T--tg
gi|5 : aAAATAATTTACTTTAT-----ATTACA-AG-ACTTTA-TA-TT-TTTTATAAATCTTATTGTGATA-ATTT-TAAT------TATATT--AATATTG---AAATAAAACATAAATGTTTGTATACTCTACAGAAATGGAGGAATAATAGTTGATtttttataaatcttattgtgataattttaattatattaatattgaaataaaacataaatgtttgtatactctacagaaatggaggaataatagttgat
gi|6 : agtagcagcaatatacttcaattcacgaggatagaatactgcaactttctcaatattcagtttccaagtgaactgtgttcatttctacaaaataaaaccaaagacaatcaattattattcttacttggatatgtggatacaatttcatcgtcactgccaacatccaagtaaatctcagaacttcaacgaggctttcctgagaacaacatgcgcatgttttgtgtttaaagtctgtttatttttaagataacggaacatacaacaagaatgtgactttgatatagacacattaaaaccgttgccgcatgtttcgtttcgtggaaatgccctaaagatgtttataaatcattcaaactagatttttagaaaacgacaatatatttTGCTAATATCTAAGCAAATCTCAGAATCTATCAACTTCATTGTTGTTTTCATAAGAACATAATTTATTATATACGCTTTTTAACAAATATGTGTTT--A---TGGTTTATACTAATTGAAGAATAATA---TAAGTACTGATGTTGAAC--GAA---AC---GAAATTGA--AACATGTATATGATTTTAATATAAACACATTAAA--TATT--TTCATA-------TCCGTGAAATATTAACCT-AAATG---ATAATTAA-TTTTATCAAACTAGAATTTA-ACACCACGACATTAGTCTTAACTTATAGACGTTAAATT-CAATATAAATATACTAATG--TAT--A--TTAACACTGATGCTACCGTATCAACTGATGAT--AACCATTGATTTTAT-----AA-AGA-AA-A----
gi|7 : ACGATTTTAATATAAACACATAAAA--CAC--------GTTTAGTTTCAGTGAAA---TTACTT-AAATGTGAAT-ATAAA-TCAT-TCACACTAGAGTTG--GCAACACGTCAACAGATTTAAATAATTTACTTTAATTTATAA-GTAAAGACAATTATTATTAT--T--T--GCA-----------GTAC--ACCGGTGATAAAACCATTGACTTTTT-----AA-AAA-AC-A----A-TA-TTATTTTGTAACTCCTAATGTGATA-ATTA-TATC------TATATTGTGATATCATTTGTATAAAATACAAATATTTGTTTAATCTCCAGTTATGGGAGAATAAggttat
gi|8 : gcacacgattgctatttattaaatctatttctgaaaggtaatctatcggcatagaagaactcttcaaaAACATTACATTGAGCAACTCATGTGTTCAACAACGTTTTCTTGAAAA-----C-A----------------AAAAAA-------A-TACATTTCGAACAGCATT-AAT-GGGAATTACGAATACGCGCAGACGCTGATTGCTTCCGGTTTTGAAGGGTCTACACTTGGCTCTCTCC-GGGAATC-GTTTGGCCCA-CTGCACTGGAGTACACGTCTTCCATAGACTTCGTGACGTTCTTGGCCATATTATGT--TGTA-AGCAAAATC----------AAGAACTGTGTAACATGTCAGGCACA--ATATACATATGAACTG-TTCCATAAA-G---TCAAA----TGTAG
gi|9 : t--CATT--TTCATGTTTTGTTTCAGTGAAA---TGACTTAAAATG-GTTT-ATAAG-TCAT-TCAAACTAAAGTTTTGAAAAC-CGACACTATATTTGAATAATTTACTTTATATTACAA-ATAAAG------ATT--TAC--ATCT--GTA-----------ATAC--AC-----ATATAACCAGAGAATTTAT-----A----A-AA-A----A-TA-TTGTTTTATGATTTATATTGTGATA-ATTG-TATT------TATATT------TTATATGTGTAAAATTTAAATGCTTGTAAAATGTCTAGAAATAGAGTATTAAAAGTTGAtttttgtgctgttgcacagtaataaa