lowQualScore : 111 1111 111 11111 1
lowQualScore : 0 4 1 55 7 55 4 55 4 1 4 4 3 3 3 99 44 2 3 555 555 000 1111 000 3 3 6 555 88 44 2 9 66666 1 0 3 0 1 999999 2 6 3 3 44 3 6 1 6 555 44 3 555 44 4 5 4 4 55 66 1 0 66 0 1
lowQualScore : . . . .. . .. . .. . . . . . . . .. .. . . ... ... ... .... ... . . . ... .. .. . . ..... . . . . . ...... . . . . .. . . . . ... .. . ... .. . . . . .. .. . . .. . .
lowQualScore : 7 0 2 55 9 55 0 55 0 4 0 0 0 3 3 22 22 4 3 444 444 888 9999 888 1 1 2 444 55 22 3 2 77777 8 4 3 4 8 666666 5 7 3 5 66 3 2 6 7 000 66 3 888 66 0 1 4 4 00 11 9 8 99 2 4
consensus : GCAGGAGATTTTCA-CTAAAGTACTG--TCTCC--ACAAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATNATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT-TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTG--TATTGCACTTTTCATTCAGATAATTTTT
Reference ( gi|35470 ) : GCAGGAGATTTTCA-CTAAAGTACTG--TCTAC--ACAAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTCAA--TG-GT-TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTG--TATTGCACTTTTCATTCAGATAATTTTT
gi|35471 : GCAGGAGATTTTCA-CTAAAGTACTG--TCTAC--ACAAAA-TAAGCA--AA-GAGGCCGTCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATAAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTTAATGTT-ATTTTTGGCAATACAGCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT-TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAAATGACCAGTCTGTATTTACTG--TATTGCACTTTTCATTCAGATAATTTTT
gi|35473 : GCAGGAGATTTTCA-TTAAAGTATTG--TCTCC--ACAAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATCT-----TTCCACCTCAATGTT-TTTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT-TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGGAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCA-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATCG--TATTGCACTTTTCATTCAGATAATTTTT
gi|35472 : GCAGGAAATTTTCA-CTGAAGTACTG--TCTAC--ACAAAA-AAAGCA--AA-GAGTCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AATATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAAAGGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATATATCGTTCTGTTTCA------TACATCATTT-T-AATATAGTGTTTGAA--TG-GT-TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTG--TATTGCACTTTTCATTCAGATAATTTTT
gi|35474 : GCTGGAGAATTTCA-CTGAAGTACTG--TCTCC--GCAAAAATAA-CA--AT-GAGGTCATCCTGGAGGGCATC-T-TTTATCATACAT-GA-ATCTGTGA--AAAAAGT-CAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ACAG--G--TTCCATAACAA-ATCAAGTTT-----TTCCACCTCAAGGTT-ATTTTTTGTAATTAATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT-CCAGAAATAGGAAT-ATTG--TTTTTCATCT--GTTGACAGTATATGTAG-TG---TTCAGCAGTAT--ACAGCAGCCTATTCA-AAACTGTTTCG-A-ATTCCATACTGCAAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTG--TATAACACGTTTCATTCAGATATTTTTT
gi|35475 : GCAAGATATTTTCA-CTAAAGTACTG--TCTAC--ACAAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGACT---TT---AT----TT---TTAAGAT-ATAA-GAGGAGTGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTAA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT-GCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-AG---TTTAGCAGTAT--ATAGCAGCCTATTCATAAA
gi|35476 : GCATGAGATTT-CA-CTCAAGTTCTG--TCTCC--ACAAAA-TTAGAA--AT-GAGGCCATCCTGGAGGGCATC-T-TTTATCACACTT-GA-ATCTGTGA--AAAATGT-AAAATTAA---CAGTCT---TT---ATTAT-TT---TTAAGAT-ATAA-GGGGAATGT---ACAG--G--TTCCATAACAA-ATCATTTTT-----TTCAACCTCAAGGTT-GTTTTTGGCAGTACATCGTTCTGTTTCA------TACAAAATTT-T-AATATAGTGTTTGAA--TG-GT-TCAAAAATAGGAAT-ATTGTTTTTTTTATTT--TTTGACAGTATATGAAG-TG---TTTAGCAATAT--ACAGCAGCCTATTTT-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATG-----------TT--TTG--TATTGAACTTTTCTTTTAGATAATTTTT
gi|35477 : GCAGGAGATTTTCA-CTAAAGTAATG--TCT-C--GCAAAA-TTAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTACAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTACGAT-GTAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAGTGTT-ATTTTTGGCAATATATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT-TCAAAAATTGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--
gi|35478 : GCATGAGATTTTCA-CTCAAGTACTG--TCTCC--ACAAAA-TTAGAA--AA-GAAGTCATCCTGGAGGGCATC-T-TTTATCATACATTAATATGTG--A--AAACTGT-TAAATTAA---TAGTCT---TT---GT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATTAA
gi|35479 : GCATGAGATTTTCA-CTCAAGTACTGTCTCTAC--A-AAAA-TA--CA--AATGAAGCCATTGTGGAGGGCATC-T-TTTATCATTCAT-TT-ATCTG--T--AAAAT
gi|35480 : AAGAAATTCTAAACTAACATGCTG--TGTCCCAACAACA-CATACATGAT-AAAGCCATCCTAGCGGGTAATGTGTTTGCCATTCAG-TA-ACCTG--TGTAAACTGT-AAAATTAAATCTATTCTGTTTC---AT----TT---TT----T-AT---------TTTTTAATAT--G--ATTCATAACAA-ATAAAAGTT-----TTTCATCTCAAGGTT-ATTTTTGGCAATACATAGTACTGCATCG------TATAACATTT-T-AATATAATGTTTGAA--TGAGT-T
gi|35482 : T-AA-AACTG--A--AAGA-GT-AACATGAA---AAATGT---TTCAAAT----TTGTATCAAGAT-ATAA-GTGG--CTT---ATAGTCA--TTCCA-AATAATATCAAAATTGGGTATTTTA---CAAT-TT-ATTGTT-GCAAGATACCGTTCTGTATTA------TACAG-ATTTAT-AATAT-GTTTTTTAA--AG-TTGTCAAGTGTAGGTTTAACTG---TTTTAAGTT--TCTGGGTGTAAATAAAT-TT---CTTTGCAATTA--ATATTATTTTATTCA-AAAC--TT---------------TGTCAAAAATTTTATTTCCGAACATAAT--GTCTGTATTTGT
gi|35481 : T-AA-AACTG--A--AAGA-GT-AACATGAA---AAATGT---TTCAAAT----TTGTATCAAGAT-ATAA-GTGG--CTT---ATAGTCA--TTCCA-AATAATATCAAAATTGGGTATTTTA---CAAT-TT-ATTGTT-GCAAGATACCGTTCTGTATTA------TACAG-ATTTAT-AATATA-T-TTTTAA--AG-TTGTCAAGTGTAGGTTTAACTG---TTTTAAGTT--TCTGGGTGTAAATAAAT-TT---CTTTGCAATTA--ATATTATTTTATTCA-AAACTTTGTCA-A-AAATGTTATTTCCGAACA--TAATGTCTGTATGTGTCCAATTTA-AATTAGTGCCTA-TACATTTTTCGCTAAGATGGTT
gi|35483 : --AAAAGGTTAAAATT-----TACTTG---TT---ATACTGCT---TTAAGAT-GTAA-GAGGTATGT---AAAT--G--TTCCATAACAA-ATCAAACCT-----TTCCACCACAACGTT-ATTTTTGGCAAATCATTGTTCAGTATCATAATTTTATAGCATTT-T-ACTTTAGTGAATAAA--AT-GC-TCAAAAGTGGGGTT-ATTC--TTTTTTA--T--TTTGACAGAACATGAAA-TA---TTTAGCAGTAT--AAAGCA
gi|35484 : AAATCAA---TAATGT--------AT----CT---T--AGATTACAA-GAGG--TTT---ATAG--ACCTCCCA-AAGAGCATCAAATCC-----TACCAAATTAAAGTTTACTTTTG-CTATATATCTTTCTGTATTA------TA-AAGATTT-CGAATATAATGTTTAAAGTTT-GT-T---AAACAGAG----TTC--TTTTTTATTTAATTT-ATGGT---TGAAGATGATTTTTTGTGTTATCAATAATAATTTATTCA-ACACTGGGTCA-A-ACTCTTTGTTTCCAAATA--GAATATCAGTAATTGACCAGTTTGTAATAATAG--CACTGTTCTTTCCTTT--GATAA
gi|35485 : T-TGAAAATTAGGAAT-ATTC--CTTTTCATTC--TGTTACAGTATATGAAA-T----TTTAGCAGTAT--AGAGCAGCCGATTGA-ATACAGTACCATACATTT--TACTTCCAAAGA----GTGTCTGAACACGACCAGTTCAT-TTTA------ATT--ATTTTCTATTC
Alignments
lowQualScore : 111 1111 111 11111
lowQualScore : 3 0 55 3 3 55 3 0 3 3 1 3 3 88 33 1 3 555 555 000 1111 000 2 2 5 555 77 33 1 8 55555 0 3 1 888888 1 6 3 55555 77 0 6 44 44 3 555 44 3 3 4 4 22 55 0 4 0
lowQualScore : . . .. . . .. . . . . . . . .. .. . . ... ... ... .... ... . . . ... .. .. . . ..... . . . ...... . . . ..... .. . . .. .. . ... .. . . . . .. .. . . .
lowQualScore : 6 3 00 6 6 00 6 5 6 6 0 1 1 55 99 6 1 000 000 000 1111 000 9 9 1 000 99 99 5 6 44444 8 1 0 888888 5 2 1 55555 99 8 2 22 22 1 444 22 6 7 0 0 66 55 7 4 1
consensus : GCAGGAGATTTTCA-CTAAAGTACTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACA-TAA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
Reference ( family-935 ) : GCAGGAGATTTTCA-CTAAAGTACTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATNATACA-TAA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35470 : GCAGGAGATTTTCA-CTAAAGTACTGTCTAC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACA-TAA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTCAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35471 : GCAGGAGATTTTCA-CTAAAGTACTGTCTAC--AC-AAAA-TAAGCA--AA-GAGGCCGTCCTGGAGGGCAAC-T-TTTATAATACA-TAA-ATCTG--A--AAAATGT-AAAATAAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTTAATGTT-ATTTTTGGCAATACAGCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAAATGACCAGTCTGTATTTACTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35472 : GCAGGAAATTTTCA-CTGAAGTACTGTCTAC--AC-AAAA-AAAGCA--AA-GAGTCCATCCTGGAGGGCAAC-T-TTTATAATACA-TAA-ATCTG--A--AAAATGT-AATATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAAAGGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATATATCGTTCTGTTTCA------TACATCATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35473 : GCAGGAGATTTTCA-TTAAAGTATTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACA-TAA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATCT-----TTCCACCTCAATGTT-TTTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGGAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCA-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATCGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35474 : GCTGGAGAATTTCA-CTGAAGTACTGTCTCC--GC-AAAAATAA-CA--AT-GAGGTCATCCTGGAGGGCATC-T-TTTATCATACA-TGA-ATCTGTGA--AAAAAGT-CAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ACAG--G--TTCCATAACAA-ATCAAGTTT-----TTCCACCTCAAGGTT-ATTTTTTGTAATTAATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--CCAGAAATAGGAAT-ATTG--TTTTTCATCT--GTTGACAGTATATGTAG-TG---TTCAGCAGTAT--ACAGCAGCCTATTCA-AAACTGTTTCG-A-ATTCCATACTGCAAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-AACACGTTTCATTCAGATATTTTTT
gi|35475 : GCAAGATATTTTCA-CTAAAGTACTGTCTAC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACA-TAA-ATCTG--A--AAAATGT-AAAATTAA---TAGACT---TT---AT----TT---TTAAGAT-ATAA-GAGGAGTGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTAA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--GCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-AG---TTTAGCAGTAT--ATAGCAGCCTATTCATAAA
gi|35476 : GCATGAGATTT-CA-CTCAAGTTCTGTCTCC--AC-AAAA-TTAGAA--AT-GAGGCCATCCTGGAGGGCATC-T-TTTATCACACT-TGA-ATCTGTGA--AAAATGT-AAAATTAA---CAGTCT---TT---ATTAT-TT---TTAAGAT-ATAA-GGGGAATGT---ACAG--G--TTCCATAACAA-ATCATTTTT-----TTCAACCTCAAGGTT-GTTTTTGGCAGTACATCGTTCTGTTTCA------TACAAAATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTGTTTTTTTTATTT--TTTGACAGTATATGAAG-TG---TTTAGCAATAT--ACAGCAGCCTATTTT-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATG-----------TT--TTGTAT-TGAACTTTTCTTTTAGATAATTTTT
gi|35477 : GCAGGAGATTTTCA-CTAAAGTAATGTCTC---GC-AAAA-TTAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTACAATACA-TAA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTACGAT-GTAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAGTGTT-ATTTTTGGCAATATATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATTGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--
gi|35478 : GCATGAGATTTTCA-CTCAAGTACTGTCTCC--AC-AAAA-TTAGAA--AA-GAAGTCATCCTGGAGGGCATC-T-TTTATCATACATTAATATGTG--A--AAACTGT-TAAATTAA---TAGTCT---TT---GT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATTAA
gi|35479 : GCATGAGATTTTCA-CTCAAGTACTGTCTCT--ACAAAAA-TA--CA--AATGAAGCCATTGTGGAGGGCATC-T-TTTATCATTCA-TTT-ATCTG--T--AAAAT
gi|35480 : AAGAAATTCTAAACTAACATGCTGTGTCCCAAC-AACA-CATACATGAT-AAAGCCATCCTAGCGGGTAATGTGTTTGCCATTCA-GTA-ACCTG--TGTAAACTGT-AAAATTAAATCTATTCTGTTTC---AT----TT---TT----T-AT---------TTTTTAATAT--G--ATTCATAACAA-ATAAAAGTT-----TTTCATCTCAAGGTT-ATTTTTGGCAATACATAGTACTGCATCG------TATAACATTT-T-AATATAATGTTTGAA--TGAGT--T
gi|35481 : -TAA-AACTG--A--AAGA-GT-AACATGAA---AAATGT---TTCAAAT----TTGTATCAAGAT-ATAA-GTGG--CTT---ATAGTCA--TTCCA-AATAATATCAAAATTGGGTATTTTA---CAAT-TT-ATTGTT-GCAAGATACCGTTCTGTATTA------TACAG-ATTTAT-AATATA-TTTTTAAA-----GTTGTCAAGTGTAGGTTTAACTG---TTTTAAGTT--TCTGGGTGTAAATAAAT-TT---CTTTGCAATTA--ATATTATTTTATTCA-AAACTTTGTCA-A-AAATGTTATTTCCGAACA--TAATGTCTGTATGTGTCCAATTTA-AATTAGTGCCTATACATTTTTCGCTAAGATGGTT
gi|35482 : -TAA-AACTG--A--AAGA-GT-AACATGAA---AAATGT---TTCAAAT----TTGTATCAAGAT-ATAA-GTGG--CTT---ATAGTCA--TTCCA-AATAATATCAAAATTGGGTATTTTA---CAAT-TT-ATTGTT-GCAAGATACCGTTCTGTATTA------TACAG-ATTTAT-AATATGTTTTTTAAA-----GTTGTCAAGTGTAGGTTTAACTG---TTTTAAGTT--TCTGGGTGTAAATAAAT-TT---CTTTGCAATTA--ATATTATTTTATTCA-AAAC--TT---------------TGTCAAAAATTTTATTTCCGAACATAAT--GTCTGTATTTGT
gi|35483 : --AAAAGGTTAAAATT-----TACTTG---TT---ATACTGCT---TTAAGAT-GTAA-GAGGTATGT---AAAT--G--TTCCATAACAA-ATCAAACCT-----TTCCACCACAACGTT-ATTTTTGGCAAATCATTGTTCAGTATCATAATTTTATAGCATTT-T-ACTTTAGTGAATAAA--AT-GC--TCAAAAGTGGGGTT-ATTC--TTTTTTA--T--TTTGACAGAACATGAAA-TA---TTTAGCAGTAT--AAAGCA
gi|35484 : AAATCAA---TAATGT--------AT----CT---T--AGATTACAA-GAGG--TTT---ATAG--ACCTCCCA-AAGAGCATCAAATCC-----TACCAAATTAAAGTTTACTTTTG-CTATATATCTTTCTGTATTA------TA-AAGATTT-CGAATATAATGTTTAAAGTTT-GT--T---AAACAGAG----TTC--TTTTTTATTTAATTT-ATGGT---TGAAGATGATTTTTTGTGTTATCAATAATAATTTATTCA-ACACTGGGTCA-A-ACTCTTTGTTTCCAAATA--GAATATCAGTAATTGACCAGTTTGTAATAATAGCAC-TGTTCTTTCCTTT--GATAA
gi|35485 : T--TGAAAATTAGGAAT-ATTC--CTTTTCATTC--TGTTACAGTATATGAAA-T----TTTAGCAGTAT--AGAGCAGCCGATTGA-ATACAGTACCATACATTT--TACTTCCAAAGA----GTGTCTGAACACGACCAGTTCAT-TTTA----AT-T--ATTTTCTATTC
Alignments
lowQualScore : 111 1111 111 11111
lowQualScore : 3 0 55 3 3 55 3 0 3 3 1 3 3 88 33 1 3 555 555 000 1111 000 2 2 5 555 77 33 1 8 55555 0 3 1 888888 1 6 3 55555 77 0 6 44 44 3 555 44 3 3 4 4 22 55 0 4 0
lowQualScore : . . .. . . .. . . . . . . . .. .. . . ... ... ... .... ... . . . ... .. .. . . ..... . . . ...... . . . ..... .. . . .. .. . ... .. . . . . .. .. . . .
lowQualScore : 6 3 00 6 6 00 6 5 6 6 9 1 1 55 99 6 1 000 000 000 1111 000 9 9 1 000 99 99 5 6 44444 8 1 0 888888 5 2 1 55555 99 8 2 22 22 1 444 22 6 7 0 0 66 55 7 4 1
consensus : GCAGGAGATTTTCA-CTAAAGTACTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
Reference ( family-935 ) : GCAGGAGATTTTCA-CTAAAGTACTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35470 : GCAGGAGATTTTCA-CTAAAGTACTGTCTAC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTCAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35471 : GCAGGAGATTTTCA-CTAAAGTACTGTCTAC--AC-AAAA-TAAGCA--AA-GAGGCCGTCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATAAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTTAATGTT-ATTTTTGGCAATACAGCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAAATGACCAGTCTGTATTTACTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35472 : GCAGGAAATTTTCA-CTGAAGTACTGTCTAC--AC-AAAA-AAAGCA--AA-GAGTCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AATATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAAAGGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATATATCGTTCTGTTTCA------TACATCATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35473 : GCAGGAGATTTTCA-TTAAAGTATTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATCT-----TTCCACCTCAATGTT-TTTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGGAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCA-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATCGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35474 : GCTGGAGAATTTCA-CTGAAGTACTGTCTCC--GC-AAAAATAA-CA--AT-GAGGTCATCCTGGAGGGCATC-T-TTTATCATACAT-GA-ATCTGTGA--AAAAAGT-CAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ACAG--G--TTCCATAACAA-ATCAAGTTT-----TTCCACCTCAAGGTT-ATTTTTTGTAATTAATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--CCAGAAATAGGAAT-ATTG--TTTTTCATCT--GTTGACAGTATATGTAG-TG---TTCAGCAGTAT--ACAGCAGCCTATTCA-AAACTGTTTCG-A-ATTCCATACTGCAAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-AACACGTTTCATTCAGATATTTTTT
gi|35475 : GCAAGATATTTTCA-CTAAAGTACTGTCTAC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGACT---TT---AT----TT---TTAAGAT-ATAA-GAGGAGTGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTAA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--GCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-AG---TTTAGCAGTAT--ATAGCAGCCTATTCATAAA
gi|35476 : GCATGAGATTT-CA-CTCAAGTTCTGTCTCC--AC-AAAA-TTAGAA--AT-GAGGCCATCCTGGAGGGCATC-T-TTTATCACACTT-GA-ATCTGTGA--AAAATGT-AAAATTAA---CAGTCT---TT---ATTAT-TT---TTAAGAT-ATAA-GGGGAATGT---ACAG--G--TTCCATAACAA-ATCATTTTT-----TTCAACCTCAAGGTT-GTTTTTGGCAGTACATCGTTCTGTTTCA------TACAAAATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTGTTTTTTTTATTT--TTTGACAGTATATGAAG-TG---TTTAGCAATAT--ACAGCAGCCTATTTT-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATG-----------TT--TTGTAT-TGAACTTTTCTTTTAGATAATTTTT
gi|35477 : GCAGGAGATTTTCA-CTAAAGTAATGTCTC---GC-AAAA-TTAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTACAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTACGAT-GTAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAGTGTT-ATTTTTGGCAATATATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATTGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--
gi|35478 : GCATGAGATTTTCA-CTCAAGTACTGTCTCC--AC-AAAA-TTAGAA--AA-GAAGTCATCCTGGAGGGCATC-T-TTTATCATACATTAATATGTG--A--AAACTGT-TAAATTAA---TAGTCT---TT---GT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATTAA
gi|35479 : GCATGAGATTTTCA-CTCAAGTACTGTCTCT--ACAAAAA-TA--CA--AATGAAGCCATTGTGGAGGGCATC-T-TTTATCATTCAT-TT-ATCTG--T--AAAAT
gi|35480 : AAGAAATTCTAAACTAACATGCTGTGTCCCAAC-AACA-CATACATGAT-AAAGCCATCCTAGCGGGTAATGTGTTTGCCATTCAG-TA-ACCTG--TGTAAACTGT-AAAATTAAATCTATTCTGTTTC---AT----TT---TT----T-AT---------TTTTTAATAT--G--ATTCATAACAA-ATAAAAGTT-----TTTCATCTCAAGGTT-ATTTTTGGCAATACATAGTACTGCATCG------TATAACATTT-T-AATATAATGTTTGAA--TGAGT--T
gi|35481 : T-AA-AACTG--A--AAGA-GT-AACATGAA---AAATGT---TTCAAAT----TTGTATCAAGAT-ATAA-GTGG--CTT---ATAGTCA--TTCCA-AATAATATCAAAATTGGGTATTTTA---CAAT-TT-ATTGTT-GCAAGATACCGTTCTGTATTA------TACAG-ATTTAT-AATATA-TTTTTAAA-----GTTGTCAAGTGTAGGTTTAACTG---TTTTAAGTT--TCTGGGTGTAAATAAAT-TT---CTTTGCAATTA--ATATTATTTTATTCA-AAACTTTGTCA-A-AAATGTTATTTCCGAACA--TAATGTCTGTATGTGTCCAATTTA-AATTAGTGCCTATACATTTTTCGCTAAGATGGTT
gi|35482 : T-AA-AACTG--A--AAGA-GT-AACATGAA---AAATGT---TTCAAAT----TTGTATCAAGAT-ATAA-GTGG--CTT---ATAGTCA--TTCCA-AATAATATCAAAATTGGGTATTTTA---CAAT-TT-ATTGTT-GCAAGATACCGTTCTGTATTA------TACAG-ATTTAT-AATATGTTTTTTAAA-----GTTGTCAAGTGTAGGTTTAACTG---TTTTAAGTT--TCTGGGTGTAAATAAAT-TT---CTTTGCAATTA--ATATTATTTTATTCA-AAAC--TT---------------TGTCAAAAATTTTATTTCCGAACATAAT--GTCTGTATTTGT
gi|35483 : --AAAAGGTTAAAATT-----TACTTG---TT---ATACTGCT---TTAAGAT-GTAA-GAGGTATGT---AAAT--G--TTCCATAACAA-ATCAAACCT-----TTCCACCACAACGTT-ATTTTTGGCAAATCATTGTTCAGTATCATAATTTTATAGCATTT-T-ACTTTAGTGAATAAA--AT-GC--TCAAAAGTGGGGTT-ATTC--TTTTTTA--T--TTTGACAGAACATGAAA-TA---TTTAGCAGTAT--AAAGCA
gi|35484 : AAATCAA---TAATGT--------AT----CT---T--AGATTACAA-GAGG--TTT---ATAG--ACCTCCCA-AAGAGCATCAAATCC-----TACCAAATTAAAGTTTACTTTTG-CTATATATCTTTCTGTATTA------TA-AAGATTT-CGAATATAATGTTTAAAGTTT-GT--T---AAACAGAG----TTC--TTTTTTATTTAATTT-ATGGT---TGAAGATGATTTTTTGTGTTATCAATAATAATTTATTCA-ACACTGGGTCA-A-ACTCTTTGTTTCCAAATA--GAATATCAGTAATTGACCAGTTTGTAATAATAGCAC-TGTTCTTTCCTTT--GATAA
gi|35485 : T--TGAAAATTAGGAAT-ATTC--CTTTTCATTC--TGTTACAGTATATGAAA-T----TTTAGCAGTAT--AGAGCAGCCGATTGA-ATACAGTACCATACATTT--TACTTCCAAAGA----GTGTCTGAACACGACCAGTTCAT-TTTA----AT-T--ATTTTCTATTC
Alignments
lowQualScore : 111 1111 111 11111
lowQualScore : 3 0 55 3 3 55 3 0 3 3 1 3 3 88 33 1 3 555 555 000 1111 000 2 2 5 555 77 33 1 8 55555 0 3 1 888888 1 6 3 55555 77 0 6 44 44 3 555 44 3 3 4 4 22 55 0 4 0
lowQualScore : . . .. . . .. . . . . . . . .. .. . . ... ... ... .... ... . . . ... .. .. . . ..... . . . ...... . . . ..... .. . . .. .. . ... .. . . . . .. .. . . .
lowQualScore : 6 3 00 6 6 00 6 5 6 6 9 1 1 55 99 6 1 000 000 000 1111 000 9 9 1 000 99 99 5 6 44444 8 1 0 888888 5 2 1 55555 99 8 2 22 22 1 444 22 6 7 0 0 66 55 7 4 1
consensus : GCAGGAGATTTTCA-CTAAAGTACTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
Reference ( family-935 ) : GCAGGAGATTTTCA-CTAAAGTACTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35470 : GCAGGAGATTTTCA-CTAAAGTACTGTCTAC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTCAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35471 : GCAGGAGATTTTCA-CTAAAGTACTGTCTAC--AC-AAAA-TAAGCA--AA-GAGGCCGTCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATAAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTTAATGTT-ATTTTTGGCAATACAGCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAAATGACCAGTCTGTATTTACTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35472 : GCAGGAAATTTTCA-CTGAAGTACTGTCTAC--AC-AAAA-AAAGCA--AA-GAGTCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AATATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAAAGGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATATATCGTTCTGTTTCA------TACATCATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35473 : GCAGGAGATTTTCA-TTAAAGTATTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATCT-----TTCCACCTCAATGTT-TTTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGGAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCA-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATCGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35474 : GCTGGAGAATTTCA-CTGAAGTACTGTCTCC--GC-AAAAATAA-CA--AT-GAGGTCATCCTGGAGGGCATC-T-TTTATCATACAT-GA-ATCTGTGA--AAAAAGT-CAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ACAG--G--TTCCATAACAA-ATCAAGTTT-----TTCCACCTCAAGGTT-ATTTTTTGTAATTAATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--CCAGAAATAGGAAT-ATTG--TTTTTCATCT--GTTGACAGTATATGTAG-TG---TTCAGCAGTAT--ACAGCAGCCTATTCA-AAACTGTTTCG-A-ATTCCATACTGCAAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-AACACGTTTCATTCAGATATTTTTT
gi|35475 : GCAAGATATTTTCA-CTAAAGTACTGTCTAC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGACT---TT---AT----TT---TTAAGAT-ATAA-GAGGAGTGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTAA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--GCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-AG---TTTAGCAGTAT--ATAGCAGCCTATTCATAAA
gi|35476 : GCATGAGATTT-CA-CTCAAGTTCTGTCTCC--AC-AAAA-TTAGAA--AT-GAGGCCATCCTGGAGGGCATC-T-TTTATCACACTT-GA-ATCTGTGA--AAAATGT-AAAATTAA---CAGTCT---TT---ATTAT-TT---TTAAGAT-ATAA-GGGGAATGT---ACAG--G--TTCCATAACAA-ATCATTTTT-----TTCAACCTCAAGGTT-GTTTTTGGCAGTACATCGTTCTGTTTCA------TACAAAATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTGTTTTTTTTATTT--TTTGACAGTATATGAAG-TG---TTTAGCAATAT--ACAGCAGCCTATTTT-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATG-----------TT--TTGTAT-TGAACTTTTCTTTTAGATAATTTTT
gi|35477 : GCAGGAGATTTTCA-CTAAAGTAATGTCTC---GC-AAAA-TTAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTACAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTACGAT-GTAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAGTGTT-ATTTTTGGCAATATATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATTGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--
gi|35478 : GCATGAGATTTTCA-CTCAAGTACTGTCTCC--AC-AAAA-TTAGAA--AA-GAAGTCATCCTGGAGGGCATC-T-TTTATCATACATTAATATGTG--A--AAACTGT-TAAATTAA---TAGTCT---TT---GT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATTAA
gi|35479 : GCATGAGATTTTCA-CTCAAGTACTGTCTCT--ACAAAAA-TA--CA--AATGAAGCCATTGTGGAGGGCATC-T-TTTATCATTCAT-TT-ATCTG--T--AAAAT
gi|35480 : AAGAAATTCTAAACTAACATGCTGTGTCCCAAC-AACA-CATACATGAT-AAAGCCATCCTAGCGGGTAATGTGTTTGCCATTCAG-TA-ACCTG--TGTAAACTGT-AAAATTAAATCTATTCTGTTTC---AT----TT---TT----T-AT---------TTTTTAATAT--G--ATTCATAACAA-ATAAAAGTT-----TTTCATCTCAAGGTT-ATTTTTGGCAATACATAGTACTGCATCG------TATAACATTT-T-AATATAATGTTTGAA--TGAGT--T
gi|35481 : T-AA-AACTG--A--AAGA-GT-AACATGAA---AAATGT---TTCAAAT----TTGTATCAAGAT-ATAA-GTGG--CTT---ATAGTCA--TTCCA-AATAATATCAAAATTGGGTATTTTA---CAAT-TT-ATTGTT-GCAAGATACCGTTCTGTATTA------TACAG-ATTTAT-AATATA-TTTTTAAA-----GTTGTCAAGTGTAGGTTTAACTG---TTTTAAGTT--TCTGGGTGTAAATAAAT-TT---CTTTGCAATTA--ATATTATTTTATTCA-AAACTTTGTCA-A-AAATGTTATTTCCGAACA--TAATGTCTGTATGTGTCCAATTTA-AATTAGTGCCTATACATTTTTCGCTAAGATGGTT
gi|35482 : T-AA-AACTG--A--AAGA-GT-AACATGAA---AAATGT---TTCAAAT----TTGTATCAAGAT-ATAA-GTGG--CTT---ATAGTCA--TTCCA-AATAATATCAAAATTGGGTATTTTA---CAAT-TT-ATTGTT-GCAAGATACCGTTCTGTATTA------TACAG-ATTTAT-AATATGTTTTTTAAA-----GTTGTCAAGTGTAGGTTTAACTG---TTTTAAGTT--TCTGGGTGTAAATAAAT-TT---CTTTGCAATTA--ATATTATTTTATTCA-AAAC--TT---------------TGTCAAAAATTTTATTTCCGAACATAAT--GTCTGTATTTGT
gi|35483 : --AAAAGGTTAAAATT-----TACTTG---TT---ATACTGCT---TTAAGAT-GTAA-GAGGTATGT---AAAT--G--TTCCATAACAA-ATCAAACCT-----TTCCACCACAACGTT-ATTTTTGGCAAATCATTGTTCAGTATCATAATTTTATAGCATTT-T-ACTTTAGTGAATAAA--AT-GC--TCAAAAGTGGGGTT-ATTC--TTTTTTA--T--TTTGACAGAACATGAAA-TA---TTTAGCAGTAT--AAAGCA
gi|35484 : AAATCAA---TAATGT--------AT----CT---T--AGATTACAA-GAGG--TTT---ATAG--ACCTCCCA-AAGAGCATCAAATCC-----TACCAAATTAAAGTTTACTTTTG-CTATATATCTTTCTGTATTA------TA-AAGATTT-CGAATATAATGTTTAAAGTTT-GT--T---AAACAGAG----TTC--TTTTTTATTTAATTT-ATGGT---TGAAGATGATTTTTTGTGTTATCAATAATAATTTATTCA-ACACTGGGTCA-A-ACTCTTTGTTTCCAAATA--GAATATCAGTAATTGACCAGTTTGTAATAATAGCAC-TGTTCTTTCCTTT--GATAA
gi|35485 : T--TGAAAATTAGGAAT-ATTC--CTTTTCATTC--TGTTACAGTATATGAAA-T----TTTAGCAGTAT--AGAGCAGCCGATTGA-ATACAGTACCATACATTT--TACTTCCAAAGA----GTGTCTGAACACGACCAGTTCAT-TTTA----AT-T--ATTTTCTATTC
blockSeqs : A CA A A TG T G G A T T TG GT T T ATC GTT CAA ACTG GTA T A A TTA TC CC T T GGGTA T T TAATTT C A G GTTT TG A TT AA A ATT CA T A T C CA TT A
blockSeqs : . . . . . . . . A . . TG . T . . . CAA TAT GTA . . A . TC . T T GGGTA . T . C A . TGA TG A . . . . . . A . . CA . .
blockSeqs : . . . . . . . . A . . . . T . . . . . . . . A . . . T C . . T . C . . TG . . . . . . . . A . . CA . .
blockSeqs : . . . . . . . . C . . . . A . . . . . . . . A . . . T . . . T . C . . TG . . . . . . . . T . . CA . .
blockSeqs : . . . . . . . . A . . . . T . . . . . . . . A . . . T . . . T . C . . TG . . . . . . . . A . . CA . .
blockSeqs : . . . . . . . . C . . . . T . . . . . . . . A . . . T . . . T . A . . TG . . . . . . . . T . . GT . .
blockSeqs : . . . . . . . . A . . . . T . . . . . . . . A . . . T . . . T . C . . TG . . . . . . . . T . . TT . .
blockSeqs : . . . . . . . . C . . . . T . . . . . . . . A . . . T . . . A . C . . TG . . . . . . . . A . . . . .
blockSeqs : . . . . . . . . C . . . . T . . . . . . . . T . . . T . . . A . C . . TG . . . . . . . . . . . . .
blockSeqs : . . . . . . . . C . . . . T . . . . . . . . . . . . T . . . A . G . . AT . . . . . . . .
blockSeqs : . . . . G . . . . . . . . . . . . . . . . A . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . .
blockSeqCons :
originalCons : GCAGGAGATTTTCA-CTAAAGTACTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
finalCons : GCAGGAGATTTTCA-CTAAAGTACTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
Alignments
lowQualScore : 111 1111 111 11111
lowQualScore : 3 0 55 3 3 55 3 0 3 3 1 3 3 88 33 1 3 555 555 000 1111 000 2 2 5 555 77 33 1 8 55555 0 3 1 888888 1 6 3 55555 77 0 6 44 44 3 555 44 3 3 4 4 22 55 0 4 0
lowQualScore : . . .. . . .. . . . . . . . .. .. . . ... ... ... .... ... . . . ... .. .. . . ..... . . . ...... . . . ..... .. . . .. .. . ... .. . . . . .. .. . . .
lowQualScore : 6 3 00 6 6 00 6 5 6 6 9 1 1 55 99 6 1 000 000 000 1111 000 9 9 1 000 99 99 5 6 44444 8 1 0 888888 5 2 1 55555 99 8 2 22 22 1 444 22 6 7 0 0 66 55 7 4 1
consensus : GCAGGAGATTTTCA-CTAAAGTACTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
Reference ( family-935 ) : GCAGGAGATTTTCA-CTAAAGTACTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35470 : GCAGGAGATTTTCA-CTAAAGTACTGTCTAC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTCAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35471 : GCAGGAGATTTTCA-CTAAAGTACTGTCTAC--AC-AAAA-TAAGCA--AA-GAGGCCGTCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATAAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTTAATGTT-ATTTTTGGCAATACAGCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAAATGACCAGTCTGTATTTACTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35472 : GCAGGAAATTTTCA-CTGAAGTACTGTCTAC--AC-AAAA-AAAGCA--AA-GAGTCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AATATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAAAGGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATATATCGTTCTGTTTCA------TACATCATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35473 : GCAGGAGATTTTCA-TTAAAGTATTGTCTCC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATCT-----TTCCACCTCAATGTT-TTTTTTGGCAATACATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGGAG-TG---TTTAGCAGTAT--ATAGCAGCCTATTCA-AAACAGTTTCA-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATCGTAT-TGCACTTTTCATTCAGATAATTTTT
gi|35474 : GCTGGAGAATTTCA-CTGAAGTACTGTCTCC--GC-AAAAATAA-CA--AT-GAGGTCATCCTGGAGGGCATC-T-TTTATCATACAT-GA-ATCTGTGA--AAAAAGT-CAAATTAA---TAGTCT---TT---AT----TT---TTAAGAT-ATAA-GGGGAATGT---ACAG--G--TTCCATAACAA-ATCAAGTTT-----TTCCACCTCAAGGTT-ATTTTTTGTAATTAATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--CCAGAAATAGGAAT-ATTG--TTTTTCATCT--GTTGACAGTATATGTAG-TG---TTCAGCAGTAT--ACAGCAGCCTATTCA-AAACTGTTTCG-A-ATTCCATACTGCAAAAGA--TTATGTCTGAAGATGACCAGTCTGTATTTATTGTAT-AACACGTTTCATTCAGATATTTTTT
gi|35475 : GCAAGATATTTTCA-CTAAAGTACTGTCTAC--AC-AAAA-TAAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTATAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGACT---TT---AT----TT---TTAAGAT-ATAA-GAGGAGTGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAATGTT-ATTTTTGGCAATACATCGTTCTGTTTAA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--GCAAAAATAGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-AG---TTTAGCAGTAT--ATAGCAGCCTATTCATAAA
gi|35476 : GCATGAGATTT-CA-CTCAAGTTCTGTCTCC--AC-AAAA-TTAGAA--AT-GAGGCCATCCTGGAGGGCATC-T-TTTATCACACTT-GA-ATCTGTGA--AAAATGT-AAAATTAA---CAGTCT---TT---ATTAT-TT---TTAAGAT-ATAA-GGGGAATGT---ACAG--G--TTCCATAACAA-ATCATTTTT-----TTCAACCTCAAGGTT-GTTTTTGGCAGTACATCGTTCTGTTTCA------TACAAAATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATAGGAAT-ATTGTTTTTTTTATTT--TTTGACAGTATATGAAG-TG---TTTAGCAATAT--ACAGCAGCCTATTTT-AAACAGTTTCG-A-ATTTCATACTGCCAAAGA--TTATGTCTGAAGATG-----------TT--TTGTAT-TGAACTTTTCTTTTAGATAATTTTT
gi|35477 : GCAGGAGATTTTCA-CTAAAGTAATGTCTC---GC-AAAA-TTAGCA--AA-GAGGCCATCCTGGAGGGCAAC-T-TTTACAATACAT-AA-ATCTG--A--AAAATGT-AAAATTAA---TAGTCT---TT---AT----TT---TTACGAT-GTAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATCAAATTT-----TTCCACCTCAGTGTT-ATTTTTGGCAATATATCGTTCTGTTTCA------TACAACATTT-T-AATATAGTGTTTGAA--TG-GT--TCAAAAATTGGAAT-ATTG--TTTTTCATTT--TTTGACAGTATATGAAG-TG---TTTAGCAGTAT--
gi|35478 : GCATGAGATTTTCA-CTCAAGTACTGTCTCC--AC-AAAA-TTAGAA--AA-GAAGTCATCCTGGAGGGCATC-T-TTTATCATACATTAATATGTG--A--AAACTGT-TAAATTAA---TAGTCT---TT---GT----TT---TTAAGAT-ATAA-GGGGAATGT---ATAG--G--TTCCATAACAA-ATTAA
gi|35479 : GCATGAGATTTTCA-CTCAAGTACTGTCTCT--ACAAAAA-TA--CA--AATGAAGCCATTGTGGAGGGCATC-T-TTTATCATTCAT-TT-ATCTG--T--AAAAT
gi|35480 : AAGAAATTCTAAACTAACATGCTGTGTCCCAAC-AACA-CATACATGAT-AAAGCCATCCTAGCGGGTAATGTGTTTGCCATTCAG-TA-ACCTG--TGTAAACTGT-AAAATTAAATCTATTCTGTTTC---AT----TT---TT----T-AT---------TTTTTAATAT--G--ATTCATAACAA-ATAAAAGTT-----TTTCATCTCAAGGTT-ATTTTTGGCAATACATAGTACTGCATCG------TATAACATTT-T-AATATAATGTTTGAA--TGAGT--T
gi|35481 : T-AA-AACTG--A--AAGA-GT-AACATGAA---AAATGT---TTCAAAT----TTGTATCAAGAT-ATAA-GTGG--CTT---ATAGTCA--TTCCA-AATAATATCAAAATTGGGTATTTTA---CAAT-TT-ATTGTT-GCAAGATACCGTTCTGTATTA------TACAG-ATTTAT-AATATA-TTTTTAAA-----GTTGTCAAGTGTAGGTTTAACTG---TTTTAAGTT--TCTGGGTGTAAATAAAT-TT---CTTTGCAATTA--ATATTATTTTATTCA-AAACTTTGTCA-A-AAATGTTATTTCCGAACA--TAATGTCTGTATGTGTCCAATTTA-AATTAGTGCCTATACATTTTTCGCTAAGATGGTT
gi|35482 : T-AA-AACTG--A--AAGA-GT-AACATGAA---AAATGT---TTCAAAT----TTGTATCAAGAT-ATAA-GTGG--CTT---ATAGTCA--TTCCA-AATAATATCAAAATTGGGTATTTTA---CAAT-TT-ATTGTT-GCAAGATACCGTTCTGTATTA------TACAG-ATTTAT-AATATGTTTTTTAAA-----GTTGTCAAGTGTAGGTTTAACTG---TTTTAAGTT--TCTGGGTGTAAATAAAT-TT---CTTTGCAATTA--ATATTATTTTATTCA-AAAC--TT---------------TGTCAAAAATTTTATTTCCGAACATAAT--GTCTGTATTTGT
gi|35483 : --AAAAGGTTAAAATT-----TACTTG---TT---ATACTGCT---TTAAGAT-GTAA-GAGGTATGT---AAAT--G--TTCCATAACAA-ATCAAACCT-----TTCCACCACAACGTT-ATTTTTGGCAAATCATTGTTCAGTATCATAATTTTATAGCATTT-T-ACTTTAGTGAATAAA--AT-GC--TCAAAAGTGGGGTT-ATTC--TTTTTTA--T--TTTGACAGAACATGAAA-TA---TTTAGCAGTAT--AAAGCA
gi|35484 : AAATCAA---TAATGT--------AT----CT---T--AGATTACAA-GAGG--TTT---ATAG--ACCTCCCA-AAGAGCATCAAATCC-----TACCAAATTAAAGTTTACTTTTG-CTATATATCTTTCTGTATTA------TA-AAGATTT-CGAATATAATGTTTAAAGTTT-GT--T---AAACAGAG----TTC--TTTTTTATTTAATTT-ATGGT---TGAAGATGATTTTTTGTGTTATCAATAATAATTTATTCA-ACACTGGGTCA-A-ACTCTTTGTTTCCAAATA--GAATATCAGTAATTGACCAGTTTGTAATAATAGCAC-TGTTCTTTCCTTT--GATAA
gi|35485 : T--TGAAAATTAGGAAT-ATTC--CTTTTCATTC--TGTTACAGTATATGAAA-T----TTTAGCAGTAT--AGAGCAGCCGATTGA-ATACAGTACCATACATTT--TACTTCCAAAGA----GTGTCTGAACACGACCAGTTCAT-TTTA----AT-T--ATTTTCTATTC