lowQualScore : 1 4 8 6
lowQualScore : . . . .
lowQualScore : 0 9 1 6
consensus : ATATTCGTAACCCCANATTTCTGATGCATAACATAANATAGGTTTAACCATTGA
Reference ( gi|36936 ) : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36940 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36939 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36938 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36937 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36935 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36941 : ATATTCGTAACCCCATATCTCTGATGCATAACACAATATAGGTTTTACCATTGA
gi|36926 : ATAATTATAACCCCAAATTTCTGATGCATAGCATAAAATAGGCTTAACCATTGA
gi|36927 : atcaacATAATTATAACCCCAAATTTCTGATGCATAGCATAAAATAGGCTTAACGATTGA
gi|36928 : atcaacATAATTATAACCCCAAATTTCTGATGCATAGCATGAAATAGGCTTAACTATTGA
gi|36932 : atcaacATATTTATAACCCCAACTTTCTGAACCATAACATAAAATGGGTTTAACCATTGA
gi|36929 : tcaacATAATTACAACCCTAAATTTCTGATGCATAGCATAAAATAGACTTAACCATTGA
gi|36930 : atcaacATAATTATAACCCCAAAATTCTGATGCATAGCATAAAATAGGCTTAAATATTGA
gi|36934 : atcaacTATTTGTAACCCCAAATTTCTGAACCATAACATAA-ATAGGTTTAACCATTGA
gi|36931 : cgGTGACCCCATATTTCTGACCCTTAACAGAAAATAGGCTTAACTATAGA
gi|36933 : atctacatagctTAACCCAAAATTTCTGAACCATAACATAAAATAGATTTAACCTTTGA
Alignments
lowQualScore : 0 1 3 2
lowQualScore : . . . .
lowQualScore : 3 0 4 4
consensus : ATATTCGTAACCCCANATCTCTGATGCATAACATAANATAGGTTTNACCATTGA
Reference ( family-918 ) : ATATTCGTAACCCCANATTTCTGATGCATAACATAANATAGGTTTAACCATTGA
gi|36926 : ATAATTATAACCCCAAATTTCTGATGCATAGCATAAAATAGGCTTAACCATTGA
gi|36927 : atcaacATAATTATAACCCCAAATTTCTGATGCATAGCATAAAATAGGCTTAACGATTGA
gi|36928 : atcaacATAATTATAACCCCAAATTTCTGATGCATAGCATGAAATAGGCTTAACTATTGA
gi|36929 : atcaacATAATTACAACCCTAAATTTCTGATGCATAGCATAAAATAGACTTAACCATTGA
gi|36930 : atcaacATAATTATAACCCCAAAATTCTGATGCATAGCATAAAATAGGCTTAAATATTGA
gi|36931 : atcaacGTGACCCCATATTTCTGACCCTTAACAGAAAATAGGCTTAACTATAGA
gi|36932 : atctacatagctATATTTATAACCCCAACTTTCTGAACCATAACATAAAATGGGTTTAACCATTGA
gi|36933 : tcaacTAACCCAAAATTTCTGAACCATAACATAAAATAGATTTAACCTTTGA
gi|36934 : tcaacgtatcatgtaTATTTGTAACCCCAAATTTCTGAACCATAACATAA-ATAGGTTTAACCATTGA
gi|36935 : cgATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36936 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36937 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36938 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36939 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36940 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36941 : ATATTCGTAACCCCATATCTCTGATGCATAACACAATATAGGTTTTACCATTGA
Alignments
lowQualScore : 0 1 3 1
lowQualScore : . . . .
lowQualScore : 3 0 6 0
consensus : ATATTCGTAACCCCANATCTCTGATGCATAACATAANATAGGTTTNACCATTGA
Reference ( family-918 ) : ATATTCGTAACCCCANATCTCTGATGCATAACATAANATAGGTTTNACCATTGA
gi|36926 : ATAATTATAACCCCAAATTTCTGATGCATAGCATAAAATAGGCTTAACCATTGA
gi|36927 : atcaacATAATTATAACCCCAAATTTCTGATGCATAGCATAAAATAGGCTTAACGATTGA
gi|36928 : atcaacATAATTATAACCCCAAATTTCTGATGCATAGCATGAAATAGGCTTAACTATTGA
gi|36929 : atcaacATAATTACAACCCTAAATTTCTGATGCATAGCATAAAATAGACTTAACCATTGA
gi|36930 : atcaacATAATTATAACCCCAAAATTCTGATGCATAGCATAAAATAGGCTTAAATATTGA
gi|36932 : atcaacATATTTATAACCCCAACTTTCTGAACCATAACATAAAATGGGTTTAACCATTGA
gi|36933 : tcaacTAACCCAAAATTTCTGAACCATAACATAAAATAGATTTAACCTTTGA
gi|36934 : tcaacgtatcatgtaTATTTGTAACCCCAAATTTCTGAACCATAACATAA-ATAGGTTTAACCATTGA
gi|36935 : cgATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36936 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36937 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36938 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36939 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36940 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36941 : ATATTCGTAACCCCATATCTCTGATGCATAACACAATATAGGTTTTACCATTGA
blockSeqs : A A A
blockSeqs : A A A
blockSeqs : A A A
blockSeqs : A A A
blockSeqs : A A A
blockSeqs : A A A
blockSeqs : A T A
blockSeqs : T T T
blockSeqs : T T T
blockSeqs : T T T
blockSeqs : T T T
blockSeqs : T T T
blockSeqs : T T T
blockSeqs : T . T
blockSeqCons :
originalCons : ATATTCGTAACCCCANATCTCTGATGCATAACATAANATAGGTTTNACCATTGA
finalCons : ATATTCGTAACCCCANATCTCTGATGCATAACATAANATAGGTTTNACCATTGA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|36931 ): ATCTACATAGCTGTGACCCCATATTTCTGACCCTTAACAGAAAATAGGCTTAACTATAGA
Alignments
lowQualScore : 0 1 3 1
lowQualScore : . . . .
lowQualScore : 3 0 6 0
consensus : ATATTCGTAACCCCANATCTCTGATGCATAACATAANATAGGTTTNACCATTGA
Reference ( family-918 ) : ATATTCGTAACCCCANATCTCTGATGCATAACATAANATAGGTTTNACCATTGA
gi|36926 : ATAATTATAACCCCAAATTTCTGATGCATAGCATAAAATAGGCTTAACCATTGA
gi|36927 : atcaacATAATTATAACCCCAAATTTCTGATGCATAGCATAAAATAGGCTTAACGATTGA
gi|36928 : atcaacATAATTATAACCCCAAATTTCTGATGCATAGCATGAAATAGGCTTAACTATTGA
gi|36929 : atcaacATAATTACAACCCTAAATTTCTGATGCATAGCATAAAATAGACTTAACCATTGA
gi|36930 : atcaacATAATTATAACCCCAAAATTCTGATGCATAGCATAAAATAGGCTTAAATATTGA
gi|36932 : atcaacATATTTATAACCCCAACTTTCTGAACCATAACATAAAATGGGTTTAACCATTGA
gi|36933 : tcaacTAACCCAAAATTTCTGAACCATAACATAAAATAGATTTAACCTTTGA
gi|36934 : tcaacgtatcatgtaTATTTGTAACCCCAAATTTCTGAACCATAACATAA-ATAGGTTTAACCATTGA
gi|36935 : cgATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36936 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36937 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36938 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36939 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36940 : ATATTCGTAACCCCATATCTCTGATGCATAACATAATATAGGTTTTACCATTGA
gi|36941 : ATATTCGTAACCCCATATCTCTGATGCATAACACAATATAGGTTTTACCATTGA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|36931 ): ATCTACATAGCTGTGACCCCATATTTCTGACCCTTAACAGAAAATAGGCTTAACTATAGA