lowQualScore : 1 111111 1 33 1 11111 33333 1 11111111111111111111111111 1
lowQualScore : 7 3 4 222222 5 6 88 7 4 7 7 4 11111 66666 1 9 6 6 6 3 88888 0 77777777777777777777777777 3 3 555 3 44 3 55 4 5
lowQualScore : . . . ...... . . .. . . . . . ..... ..... . . . . . . ..... . .......................... . . ... . .. . .. . .
lowQualScore : 0 7 4 888888 0 0 55 0 4 2 0 4 11111 88888 9 6 0 0 0 1 33333 4 33333333333333333333333333 3 3 888 3 66 3 55 1 0
consensus : AATCAAAGTACTNAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTTT-GTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGA-AA-GTTTTGTCACAATGCATTTAAATATCAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
Reference ( gi|85271 ) : AATCAAAGAACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAATTATAATAAGGAAGAGCGTTTTTAATTTTTTCCCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGGACAATTTGTTTTCTAGGCACAAACACTCTTTTT-GTCTAATAACTTCAGTCTACAGTTATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTG--AG-GTTTTGTCACAATGCATTTATATATCAGTTTCTCTGGCAACTCAAAAACTGACCGCGGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGACCCAAGAGGGTATGT
gi|85272 : AATCGAAGTACTTAAAAGTACTGGTGG------CCGATGCATGTTTTCACAGGGAAATATTTATTAAAGTTTCACGAAAGAAGTATATTAAGGAAGAGTGTTTTTAATGTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAAAACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTTTTGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGG-AA-GTTTTGTCACAATGCATTTAAATATCAATTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCAACACCCCA-----ACTA-------A-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAT-AA---AAGAGGCCCAAGAGGGT
gi|85273 : AATCAAAGTATTATAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAA-TATTTATTGAAAGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTCTTAACCAATTATTGAATTTATTTTTCACAATACAGTAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTTT-GTCTAACAACTTCAGTCTACAGTAATGACATAATTTCAGATTGTCATATCTCT-CCTACA-----GTGA-AA-GTTTTGTCACAATGCATTTAAATATTAGTTTGTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----CATA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-A--AAAAAAAA-TAC--AAGAGGCCCAAGAAGGTCTGTctat
gi|85274 : AATCAAAGTGCTCAAA-GTACTGGTGG------CTGGTGCATGTTTTTATAGGGAAATATTTATCGAAGGTTCATGAAGGAAGTATAATAAGAAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTTGGCACAAACACTCTTATT-GTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTTCATATCTCTGA-AA-GTTATGTCACAATGCATTTAAATATCAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGAAGAA-TTTAAACCCCA-----ACTG-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAACAAA-AAC--AAGAGGCCCAAAAGGGTCTGT
gi|85275 : AATCAAAGTACTTAAA-GTACTGGTGG------TCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTTACGAAGAAAGCATAATAAGGAAG--TGTTTTTA--TTTTTTCCCTTTCTTATCCAATAATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTCTTT-ATATAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGA-AA-GTTTTGTCACAATGCATTTAAATATCAGTCTCTCTGGCGACTCAAAAACTGACCACAGAGGACATACCATGAGATGAT-GCTACA-CCCA-----ACTA-------T-----C-----T---C--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAA----T-T--AAAAAAAA-AAC--AAGGG
gi|85276 : AATCAAAGTACTATAC-GTACTGGTGG------CCGGTGCATGTTTTTAT----------------------TACGATGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTCTTACCCAGTTATTGAGTT-ATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTT-CTAGGCACAAACACTCTTTTT-GTCTTAAAACTTTATTCTACAGTAATGACATAATTTCAGATTGTCATATCTCT-GCTACA-----GTG--AAAGTTTTGTCACAATGCATTTAAATATCAGTT-CTCTGGCGACTCAAAA-CTGACCACAGAGG-CATATCATGAGATGAT-ACTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAATA-AAC--AAGAGGCCCAAGAGGGTgtc
gi|85277 : AATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATACGGAAATATTTATTGAAGGTTCGCGAA-AAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCAAATTATTGAATTTATT---CACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACTCTCTTTTT-GTCAAACAACTTCAGTCTACAGTAATGACATCACTTCAGATTGTGATATCTCT-ATTACA-----GTGAAAG-G-TTTGTCACAATGCATTTA-ATATCAGTTTCTCCGGCGACTCAAAAACTGACCACAGATGA-----CATGAGATGAT-GCTACACCCCc
gi|85278 : AATCAAACTACTTAAA-GCACTGGTGGTTAATTCTTGT-CATATTTTT-TAGGGAAATATCTATTGAAGGTT--CGGAGA
gi|85279 : ATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTGT--CCTTTTTTTACCCAATTAATGAATTTATTTCTCACAATACAGCAACAACAAATGG---------------------CACAAACACTCTTTTT-GTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTTTGATATTTTTTACTACA-----GTG--AAAGTTTTGTCACAATGCATTTAAATATCAGTTTCTCTGGCGGCTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----A-----T---T--GACCAT-GTACTGGCGTCG-GAGATTTTTTAAATGAATGT--AAATAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
gi|85280 : ACTAAAA-GTACTGGTGG------CCTGTACATGTTTTTATAGTGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTT-AATTTTTTCCCCTTTTT-ATCCTATTATTGAATTTATTTCTCACACTACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTTT-GTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACAACA-----ATGA-AA-GTTTTGTCACAATGCATTTAAATATTAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCATCG-GAGATTTTTGAAAT---T-T--AAAAAAAACAAC--AAAAGGCCCAAGAGGGTCTGT
gi|85281 : tTTTTTACCAAATTATTGAAATTATTTCTC----T---GCAACAACAAATGGTTGAACGATTTGTTTTCTAGGCACAAACACTCTTTTT-GTCTAACAACTTCAGTCTACTGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAG-G-TTTGTCACAATGCATTTAAATATCAGTTTCCCTGGGGACTCAAA-----ACCACAGAGGACATATCATGAGATGATGGCTA
gi|85282 : TTATTAGATGAT-ACTACATGCAA-----AATA-------TAAAAGC-----T---CCAGGCCTT-GCACTTTCGGAG-AAGATTTTTGAAAT---T-TTGAAAAAAAA-A
gi|85283 : ATTAGGTGAT-ACTACACCATA-----A-TA-------T-----CAAAGCTCCAT--G-CCTT-GCACTTTCGGAG-AAGATTTTTGAAAT---T-T--AAAAAAAA-AA
gi|85284 : GATGAT-GTTATACCACATGCAAACTA-------T-----C-----A------AAGCATTGTACTTTCG--GAGAAATTTTTTAAAT---T-T--AAAAAAAA-AAA--AAAAaga
gi|85285 : TGAT-ACTACATGCAA-----AATAACAAAGTT-----C-----C---A--GGCCTT-GCACTTTCATAG-AAGATTTTTAAAAT---T-T--GAAAGAAA-AACTGATAAGACCCTGGAGGGT
gi|85286 : TACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
Alignments
lowQualScore : 111111 11111 11111111111111111111111111
lowQualScore : 1 4 111111 66 4 4 00000 2 77777 33333333333333333333333333 3 3 555 3 44 3 55
lowQualScore : . . ...... .. . . ..... . ..... .......................... . . ... . .. . ..
lowQualScore : 0 0 555555 11 0 0 00000 9 77777 22222222222222222222222222 1 1 444 1 22 1 00
consensus : AATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
Reference ( family-912 ) : AATCAAAGTACTNAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
gi|85271 : AATCAAAGAACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAATTATAATAAGGAAGAGCGTTTTTAATTTTTTCCCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGGACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAATAACTTCAGTCTACAGTTATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAG-GTTTTGTCACAATGCATTTATATATCAGTTTCTCTGGCAACTCAAAAACTGACCGCGGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGACCCAAGAGGGTATGT
gi|85272 : AATCGAAGTACTTAAAAGTACTGGTGG------CCGATGCATGTTTTCACAGGGAAATATTTATTAAAGTTTCACGAAAGAAGTATATTAAGGAAGAGTGTTTTTAATGTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAAAACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTTTTGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGGAAGTTTTGTCACAATGCATTTAAATATCAATTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCAACACCCCA-----ACTA-------A-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAT-AA---AAGAGGCCCAAGAGGGTCTAT
gi|85273 : AATCAAAGTATTATAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAA-TATTTATTGAAAGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTCTTAACCAATTATTGAATTTATTTTTCACAATACAGTAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATAATTTCAGATTGTCATATCTCT-CCTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATTAGTTTGTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----CATA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-A--AAAAAAAA-TAC--AAGAGGCCCAAGAAGGTCTGT
gi|85274 : AATCAAAGTGCTCAAA-GTACTGGTGG------CTGGTGCATGTTTTTATAGGGAAATATTTATCGAAGGTTCATGAAGGAAGTATAATAAGAAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTTGGCACAAACACTCTTAT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTTCATATCTCTGAAAGTTATGTCACAATGCATTTAAATATCAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGAAGAA-TTTAAACCCCA-----ACTG-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAACAAA-AAC--AAGAGGCCCAAAAGGGTCTGT
gi|85275 : AATCAAAGTACTTAAA-GTACTGGTGG------TCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTTACGAAGAAAGCATAATAAGGAAG--TGTTTTTATTTTTT--CCCTTTCTTATCCAATAATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTCTT-TATATAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTCTCTCTGGCGACTCAAAAACTGACCACAGAGGACATACCATGAGATGAT-GCTACA-CCCA-----ACTA-------T-----C-----T---C--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAA----T-T--AAAAAAAA-AAC--AAGGGGTC
gi|85276 : AATCAAAGTACTATAC-GTACTGGTGG------CCGGTGCATGTTTTTAT----------------------TACGATGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTCTTACCCAGTTATTGAGTT-ATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTT-CTAGGCACAAACACTCTTTT-TGTCTTAAAACTTTATTCTACAGTAATGACATAATTTCAGATTGTCATATCTCT-GCTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAG-TTCTCTGGCGACTC-AAAACTGACCACAGAGG-CATATCATGAGATGAT-ACTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAATA-AAC--AAGAGGCCCAAGAGGGTC
gi|85277 : AATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATACGGAAATATTTATTGAAGGTTCGCGAA-AAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCAAATTATTGAATTTATT---CACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACTCTCTTTT-TGTCAAACAACTTCAGTCTACAGTAATGACATCACTTCAGATTGTGATATCTCT-ATTACA-----GTGAAAGGTTTGTCACAATGCATTT-AATATCAGTTTCTCCGGCGACTCAAAAACTGACCACAGATGA-----CATGAGATGAT-GCTACACCCC
gi|85278 : AATCAAACTACTTAAA-GCACTGGTGGTTAATTCTTGT-CATATTTTT-TAGGGAAATATCTATTGAAGGTT--CGGAGA
gi|85279 : ATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTGT--CCTTTTTTTACCCAATTAATGAATTTATTTCTCACAATACAGCAACAACAAATGG---------------------CACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTTTGATATTTTTTACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTTTCTCTGGCGGCTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----A-----T---T--GACCAT-GTACTGGCGTCG-GAGATTTTTTAAATGAATGT--AAATAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
gi|85280 : TACTAAAA-GTACTGGTGG------CCTGTACATGTTTTTATAGTGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTAATTTTTT--CCCCTTTTTATCCTATTATTGAATTTATTTCTCACACTACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACAACA-----ATGAAAGTTTTGTCACAATGCATTTAAATATTAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCATCG-GAGATTTTTGAAAT---T-T--AAAAAAAACAAC--AAAAGGCCCAAGAGGGTCTGT
gi|85281 : TTTTTACCAAATTATTGAAATTATTTCTC----T---GCAACAACAAATGGTTGAACGATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACTGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGGTTTGTCACAATGCATTTAAATATCAGTTTCCCTGGGGACTCAAA-----ACCACAGAGGACATATCATGAGATGATGGCTA
gi|85282 : TTATTAGATGAT-ACTACATGCAA-----AATA-------TAAAAGC-----T---CCAGGCCTT-GCACTTTCGGAG-AAGATTTTTGAAAT---T-TTGAAAAAAAA-A
gi|85283 : ATTAGGTGAT-ACTACACCATA-----A-TA-------T-----CAAAGCTCCAT--G-CCTT-GCACTTTCGGAG-AAGATTTTTGAAAT---T-T--AAAAAAAA-AA
gi|85284 : GATGAT-GTTATACCACATGCAAACTA-------T-----C-----A------AAGCATTGTACTTTCG--GAGAAATTTTTTAAAT---T-T--AAAAAAAA-AAA--AAAAaga
gi|85285 : TGAT-ACTACATGCAA-----AATAACAAAGTT-----C-----C---A--GGCCTT-GCACTTTCATAG-AAGATTTTTAAAAT---T-T--GAAAGAAA-AACTGATAAGACCCTGGAGGGT
gi|85286 : TACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
Alignments
lowQualScore : 111111 11111 11111111111111111111111111
lowQualScore : 2 4 111111 66 4 4 00000 2 77777 33333333333333333333333333 3 3 555 3 44 3 55
lowQualScore : . . ...... .. . . ..... . ..... .......................... . . ... . .. . ..
lowQualScore : 3 0 555555 11 0 0 00000 9 77777 22222222222222222222222222 1 1 444 1 22 1 00
consensus : AATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
Reference ( family-912 ) : AATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
gi|85271 : AATCAAAGAACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAATTATAATAAGGAAGAGCGTTTTTAATTTTTTCCCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGGACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAATAACTTCAGTCTACAGTTATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAG-GTTTTGTCACAATGCATTTATATATCAGTTTCTCTGGCAACTCAAAAACTGACCGCGGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGACCCAAGAGGGTATGT
gi|85272 : AATCGAAGTACTTAAAAGTACTGGTGG------CCGATGCATGTTTTCACAGGGAAATATTTATTAAAGTTTCACGAAAGAAGTATATTAAGGAAGAGTGTTTTTAATGTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAAAACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTTTTGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGGAAGTTTTGTCACAATGCATTTAAATATCAATTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCAACACCCCA-----ACTA-------A-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAT-AA---AAGAGGCCCAAGAGGGTCTAT
gi|85273 : AATCAAAGTATTATAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAA-TATTTATTGAAAGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTCTTAACCAATTATTGAATTTATTTTTCACAATACAGTAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATAATTTCAGATTGTCATATCTCT-CCTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATTAGTTTGTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----CATA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-A--AAAAAAAA-TAC--AAGAGGCCCAAGAAGGTCTGT
gi|85274 : AATCAAAGTGCTCAAA-GTACTGGTGG------CTGGTGCATGTTTTTATAGGGAAATATTTATCGAAGGTTCATGAAGGAAGTATAATAAGAAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTTGGCACAAACACTCTTAT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTTCATATCTCTGAAAGTTATGTCACAATGCATTTAAATATCAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGAAGAA-TTTAAACCCCA-----ACTG-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAACAAA-AAC--AAGAGGCCCAAAAGGGTCTGT
gi|85275 : AATCAAAGTACTTAAA-GTACTGGTGG------TCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTTACGAAGAAAGCATAATAAGGAAG--TGTTTTTATTTTTT--CCCTTTCTTATCCAATAATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTCTT-TATATAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTCTCTCTGGCGACTCAAAAACTGACCACAGAGGACATACCATGAGATGAT-GCTACA-CCCA-----ACTA-------T-----C-----T---C--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAA----T-T--AAAAAAAA-AAC--AAGGGGTC
gi|85276 : AATCAAAGTACTATAC-GTACTGGTGG------CCGGTGCATGTTTTTAT----------------------TACGATGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTCTTACCCAGTTATTGAGTT-ATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTT-CTAGGCACAAACACTCTTTT-TGTCTTAAAACTTTATTCTACAGTAATGACATAATTTCAGATTGTCATATCTCT-GCTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAG-TTCTCTGGCGACTC-AAAACTGACCACAGAGG-CATATCATGAGATGAT-ACTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAATA-AAC--AAGAGGCCCAAGAGGGTC
gi|85277 : AATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATACGGAAATATTTATTGAAGGTTCGCGAA-AAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCAAATTATTGAATTTATT---CACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACTCTCTTTT-TGTCAAACAACTTCAGTCTACAGTAATGACATCACTTCAGATTGTGATATCTCT-ATTACA-----GTGAAAGGTTTGTCACAATGCATTT-AATATCAGTTTCTCCGGCGACTCAAAAACTGACCACAGATGA-----CATGAGATGAT-GCTACACCCC
gi|85278 : AATCAAACTACTTAAA-GCACTGGTGGTTAATTCTTGT-CATATTTTT-TAGGGAAATATCTATTGAAGGTT--CGGAGA
gi|85279 : ATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTGT--CCTTTTTTTACCCAATTAATGAATTTATTTCTCACAATACAGCAACAACAAATGG---------------------CACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTTTGATATTTTTTACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTTTCTCTGGCGGCTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----A-----T---T--GACCAT-GTACTGGCGTCG-GAGATTTTTTAAATGAATGT--AAATAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
gi|85280 : TACTAAAA-GTACTGGTGG------CCTGTACATGTTTTTATAGTGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTAATTTTTT--CCCCTTTTTATCCTATTATTGAATTTATTTCTCACACTACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACAACA-----ATGAAAGTTTTGTCACAATGCATTTAAATATTAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCATCG-GAGATTTTTGAAAT---T-T--AAAAAAAACAAC--AAAAGGCCCAAGAGGGTCTGT
gi|85281 : TTTTTACCAAATTATTGAAATTATTTCTC----T---GCAACAACAAATGGTTGAACGATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACTGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGGTTTGTCACAATGCATTTAAATATCAGTTTCCCTGGGGACTCAAA-----ACCACAGAGGACATATCATGAGATGATGGCTA
gi|85282 : TTATTAGATGAT-ACTACATGCAA-----AATA-------TAAAAGC-----T---CCAGGCCTT-GCACTTTCGGAG-AAGATTTTTGAAAT---T-TTGAAAAAAAA-A
gi|85283 : ATTAGGTGAT-ACTACACCATA-----A-TA-------T-----CAAAGCTCCAT--G-CCTT-GCACTTTCGGAG-AAGATTTTTGAAAT---T-T--AAAAAAAA-AA
gi|85284 : GATGAT-GTTATACCACATGCAAACTA-------T-----C-----A------AAGCATTGTACTTTCG--GAGAAATTTTTTAAAT---T-T--AAAAAAAA-AAA--AAAAaga
gi|85285 : TGAT-ACTACATGCAA-----AATAACAAAGTT-----C-----C---A--GGCCTT-GCACTTTCATAG-AAGATTTTTAAAAT---T-T--GAAAGAAA-AACTGATAAGACCCTGGAGGGT
gi|85286 : TACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
blockSeqs : T A TTAATT . T T TATCT G TGCAA TCAAAGCTCCAT T A GAA G TG C TG
blockSeqs : A . . . . . . . . TAAAAGCTCCA . . . . . . .
blockSeqs : C . . . . . . . . ACAAAGTTCCA . . . . . . .
blockSeqs : T . . . . . . . . ACTT . . . . . . .
blockSeqs : A . . . . . . . . TCTT . . . . . . .
blockSeqs : C . . . . . . . . TCTT . . . . . . .
blockSeqs : T . . . . . . . . TCTC . . . . . . .
blockSeqs : C . . . . . . . . TCTT . . . . . . .
blockSeqs : A . . . . . . . TATT . . . . . . .
blockSeqs : . . TCTT . . . . . . .
blockSeqs : . . TCTT . . . . . .
blockSeqs : . . TCA . . . . . .
blockSeqs : .
blockSeqCons : **
originalCons : AATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
finalCons : AATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
Alignments
lowQualScore : 111111 11111 11111111111111111111111111
lowQualScore : 2 4 111111 66 4 4 00000 2 77777 33333333333333333333333333 3 3 555 3 44 3 55
lowQualScore : . . ...... .. . . ..... . ..... .......................... . . ... . .. . ..
lowQualScore : 3 0 555555 11 0 0 00000 9 77777 22222222222222222222222222 1 1 444 1 22 1 00
consensus : AATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
Reference ( family-912 ) : AATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
gi|85271 : AATCAAAGAACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAATTATAATAAGGAAGAGCGTTTTTAATTTTTTCCCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGGACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAATAACTTCAGTCTACAGTTATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAG-GTTTTGTCACAATGCATTTATATATCAGTTTCTCTGGCAACTCAAAAACTGACCGCGGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGACCCAAGAGGGTATGT
gi|85272 : AATCGAAGTACTTAAAAGTACTGGTGG------CCGATGCATGTTTTCACAGGGAAATATTTATTAAAGTTTCACGAAAGAAGTATATTAAGGAAGAGTGTTTTTAATGTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAAAACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTTTTGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGGAAGTTTTGTCACAATGCATTTAAATATCAATTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCAACACCCCA-----ACTA-------A-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAT-AA---AAGAGGCCCAAGAGGGTCTAT
gi|85273 : AATCAAAGTATTATAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAA-TATTTATTGAAAGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTCTTAACCAATTATTGAATTTATTTTTCACAATACAGTAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATAATTTCAGATTGTCATATCTCT-CCTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATTAGTTTGTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----CATA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-A--AAAAAAAA-TAC--AAGAGGCCCAAGAAGGTCTGT
gi|85274 : AATCAAAGTGCTCAAA-GTACTGGTGG------CTGGTGCATGTTTTTATAGGGAAATATTTATCGAAGGTTCATGAAGGAAGTATAATAAGAAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCCAATTATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTTGGCACAAACACTCTTAT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTTCATATCTCTGAAAGTTATGTCACAATGCATTTAAATATCAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGAAGAA-TTTAAACCCCA-----ACTG-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAACAAA-AAC--AAGAGGCCCAAAAGGGTCTGT
gi|85275 : AATCAAAGTACTTAAA-GTACTGGTGG------TCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTTACGAAGAAAGCATAATAAGGAAG--TGTTTTTATTTTTT--CCCTTTCTTATCCAATAATTGAATTTATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTCTT-TATATAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTCTCTCTGGCGACTCAAAAACTGACCACAGAGGACATACCATGAGATGAT-GCTACA-CCCA-----ACTA-------T-----C-----T---C--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAA----T-T--AAAAAAAA-AAC--AAGGGGTC
gi|85276 : AATCAAAGTACTATAC-GTACTGGTGG------CCGGTGCATGTTTTTAT----------------------TACGATGAAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTCTTACCCAGTTATTGAGTT-ATTTCTCACAATACAGCAACAACAAATGGTTGAACAATTTGTTT-CTAGGCACAAACACTCTTTT-TGTCTTAAAACTTTATTCTACAGTAATGACATAATTTCAGATTGTCATATCTCT-GCTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAG-TTCTCTGGCGACTC-AAAACTGACCACAGAGG-CATATCATGAGATGAT-ACTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAATA-AAC--AAGAGGCCCAAGAGGGTC
gi|85277 : AATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATACGGAAATATTTATTGAAGGTTCGCGAA-AAAGTATAATAAGGAAGAGTGTTTTTAATTTTT--CCCTTTTTTACCAAATTATTGAATTTATT---CACAATACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACTCTCTTTT-TGTCAAACAACTTCAGTCTACAGTAATGACATCACTTCAGATTGTGATATCTCT-ATTACA-----GTGAAAGGTTTGTCACAATGCATTT-AATATCAGTTTCTCCGGCGACTCAAAAACTGACCACAGATGA-----CATGAGATGAT-GCTACACCCC
gi|85278 : AATCAAACTACTTAAA-GCACTGGTGGTTAATTCTTGT-CATATTTTT-TAGGGAAATATCTATTGAAGGTT--CGGAGA
gi|85279 : ATCAAAGTACTCAAA-GTACTGGTGG------CCGGTGCATGTTTTTATAGGGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTTAATTTGT--CCTTTTTTTACCCAATTAATGAATTTATTTCTCACAATACAGCAACAACAAATGG---------------------CACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTTTGATATTTTTTACTACA-----GTGAAAGTTTTGTCACAATGCATTTAAATATCAGTTTCTCTGGCGGCTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----A-----T---T--GACCAT-GTACTGGCGTCG-GAGATTTTTTAAATGAATGT--AAATAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT
gi|85280 : TACTAAAA-GTACTGGTGG------CCTGTACATGTTTTTATAGTGAAATATTTATTGAAGGTTCACGAAGAAAGTATAATAAGGAAGAGTGTTTTAATTTTTT--CCCCTTTTTATCCTATTATTGAATTTATTTCTCACACTACAGCAACAACAAATGGTTGAACAATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACAGTAATGACATCATTTCAGATTGTGATATCTCT-ACAACA-----ATGAAAGTTTTGTCACAATGCATTTAAATATTAGTTTCTCTGGCGACTCAAAAACTGACCACAGAGGACATATCATGAGATGAT-GCTACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCATCG-GAGATTTTTGAAAT---T-T--AAAAAAAACAAC--AAAAGGCCCAAGAGGGTCTGT
gi|85281 : TTTTTACCAAATTATTGAAATTATTTCTC----T---GCAACAACAAATGGTTGAACGATTTGTTTTCTAGGCACAAACACTCTTTT-TGTCTAACAACTTCAGTCTACTGTAATGACATCATTTCAGATTGTGATATCTCT-ACTACA-----GTGAAAGGTTTGTCACAATGCATTTAAATATCAGTTTCCCTGGGGACTCAAA-----ACCACAGAGGACATATCATGAGATGATGGCTA
gi|85282 : TTATTAGATGAT-ACTACATGCAA-----AATA-------TAAAAGC-----T---CCAGGCCTT-GCACTTTCGGAG-AAGATTTTTGAAAT---T-TTGAAAAAAAA-A
gi|85283 : ATTAGGTGAT-ACTACACCATA-----A-TA-------T-----CAAAGCTCCAT--G-CCTT-GCACTTTCGGAG-AAGATTTTTGAAAT---T-T--AAAAAAAA-AA
gi|85284 : GATGAT-GTTATACCACATGCAAACTA-------T-----C-----A------AAGCATTGTACTTTCG--GAGAAATTTTTTAAAT---T-T--AAAAAAAA-AAA--AAAAaga
gi|85285 : TGAT-ACTACATGCAA-----AATAACAAAGTT-----C-----C---A--GGCCTT-GCACTTTCATAG-AAGATTTTTAAAAT---T-T--GAAAGAAA-AACTGATAAGACCCTGGAGGGT
gi|85286 : TACACCCCA-----ACTA-------T-----C-----T---T--GACCAT-GTACTGTCGTCG-GAGATTTTTGAAAT---T-T--AAAAAAAA-AAC--AAGAGGCCCAAGAGGGTCTGT