lowQualScore                  :     3                        777777                 2     33        
lowQualScore                  :     .                        ......                 .     ..        
lowQualScore                  :     3                        222222                 5     44        
consensus                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
Reference ( gi|142179 )       : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCATCCTCTTTTTC-ATGCC--CACATTTT
gi|142180                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCATCCTCTTTTTC-ATGCC--CATATTTT
gi|142178                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCAGCATCCTCTTTTTC-ATGCC--CACATTTT
gi|142182                     : AAAA-GAAGGACATTGCATGAAAAAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
gi|142183                     : AAAA-GAAGGATATTGCATGAAAAAGTGT------TCGGCATCCTCTTTTTC-ATGCC--CACATTTT
gi|142184                     : AAAA-GCAGGACATTACATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATACC--AACATTTT
gi|142185                     : AACA-GAAGGACATTGCATGAAATAGTCT------TTGGCATCCTCTTTTTT-ATGCC--CACA
gi|142186                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCGTTGTC-ATGCCATCATAT
gi|142181                     : AAAATGAAGGACAATGCATGAAATAGTGT------TCAGCGTCCTCTTTTTA-ATGCT--CACTTTTT
gi|142187                     : AAAA-GAAGGTCATAGCATGAAAAAGTGT------TCTGCG---TCTTTTTCTATGCC--CACATCTT
gi|142188                     :  AAA-AAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
gi|142189                     :  AAA-AAAGGCAATTGCATGAAATAGTGT------TCGGTAACCTCTTTTTC-ATGCC--CATATTTT
gi|142190                     :  AAA-GAAGGACATTGCATGAAACAATGCTCCAAGTCAGTATCCTCTTTTTC-GTGCT--CACATTTT
gi|142191                     :       AAGGACAATGCATGAAATAGTGT------TCAGCGTCCTCTTTTTA-ATGCT--CATATT
gi|142192                     :       AAGGACAATGCATGAAATAGTGC------TCAGCGTCCTCTTTTTA-ATGCT--CATATT
gi|142193                     :       AAGGACAATGCCTGAAATAGTGT------TCAGCGTCCTCTTTTTA-ATGCT--CATATT
gi|142194                     :          GACATTGCATAAAATAATGA------TCGGCATCTTCTTTTTC-GTACC--CACA

lowQualScore                  :     3                        666666                 2     33        
lowQualScore                  :     .                        ......                 .     ..        
lowQualScore                  :     1                        888888                 4     22        
consensus                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
Reference ( family-894 )      : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
gi|142178                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCAGCATCCTCTTTTTC-ATGCC--CACATTTT
gi|142179                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCATCCTCTTTTTC-ATGCC--CACATTTT
gi|142180                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCATCCTCTTTTTC-ATGCC--CATATTTT
gi|142181                     : AAAATGAAGGACAATGCATGAAATAGTGT------TCAGCGTCCTCTTTTTA-ATGCT--CACTTTTT
gi|142182                     : AAAA-GAAGGACATTGCATGAAAAAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
gi|142183                     : AAAA-GAAGGATATTGCATGAAAAAGTGT------TCGGCATCCTCTTTTTC-ATGCC--CACATTTT
gi|142184                     : AAAA-GCAGGACATTACATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATACC--AACATTTT
gi|142185                     : AACA-GAAGGACATTGCATGAAATAGTCT------TTGGCATCCTCTTTTTT-ATGCC--CACA
gi|142186                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCGTTGTC-ATGCCATCATAT
gi|142187                     : AAAA-GAAGGTCATAGCATGAAAAAGTGT------TCTGCG---TCTTTTTCTATGCC--CACATCTT
gi|142188                     :  AAA-AAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
gi|142189                     :  AAA-AAAGGCAATTGCATGAAATAGTGT------TCGGTAACCTCTTTTTC-ATGCC--CATATTTT
gi|142190                     :  AAA-GAAGGACATTGCATGAAACAATGCTCCAAGTCAGTATCCTCTTTTTC-GTGCT--CACATTTT
gi|142191                     :       AAGGACAATGCATGAAATAGTGT------TCAGCGTCCTCTTTTTA-ATGCT--CATATT
gi|142192                     :       AAGGACAATGCATGAAATAGTGC------TCAGCGTCCTCTTTTTA-ATGCT--CATATT
gi|142193                     :       AAGGACAATGCCTGAAATAGTGT------TCAGCGTCCTCTTTTTA-ATGCT--CATATT
gi|142194                     :          GACATTGCATAAAATAATGA------TCGGCATCTTCTTTTTC-GTACC--CACA

lowQualScore                  :     3                        666666                 2     33        
lowQualScore                  :     .                        ......                 .     ..        
lowQualScore                  :     1                        888888                 4     22        
consensus                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
Reference ( family-894 )      : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
gi|142178                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCAGCATCCTCTTTTTC-ATGCC--CACATTTT
gi|142179                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCATCCTCTTTTTC-ATGCC--CACATTTT
gi|142180                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCATCCTCTTTTTC-ATGCC--CATATTTT
gi|142181                     : AAAATGAAGGACAATGCATGAAATAGTGT------TCAGCGTCCTCTTTTTA-ATGCT--CACTTTTT
gi|142182                     : AAAA-GAAGGACATTGCATGAAAAAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
gi|142183                     : AAAA-GAAGGATATTGCATGAAAAAGTGT------TCGGCATCCTCTTTTTC-ATGCC--CACATTTT
gi|142184                     : AAAA-GCAGGACATTACATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATACC--AACATTTT
gi|142185                     : AACA-GAAGGACATTGCATGAAATAGTCT------TTGGCATCCTCTTTTTT-ATGCC--CACA
gi|142186                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCGTTGTC-ATGCCATCATAT
gi|142187                     : AAAA-GAAGGTCATAGCATGAAAAAGTGT------TCTGCG---TCTTTTTCTATGCC--CACATCTT
gi|142188                     :  AAA-AAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
gi|142189                     :  AAA-AAAGGCAATTGCATGAAATAGTGT------TCGGTAACCTCTTTTTC-ATGCC--CATATTTT
gi|142190                     :  AAA-GAAGGACATTGCATGAAACAATGCTCCAAGTCAGTATCCTCTTTTTC-GTGCT--CACATTTT
gi|142191                     :       AAGGACAATGCATGAAATAGTGT------TCAGCGTCCTCTTTTTA-ATGCT--CATATT
gi|142192                     :       AAGGACAATGCATGAAATAGTGC------TCAGCGTCCTCTTTTTA-ATGCT--CATATT
gi|142193                     :       AAGGACAATGCCTGAAATAGTGT------TCAGCGTCCTCTTTTTA-ATGCT--CATATT
gi|142194                     :          GACATTGCATAAAATAATGA------TCGGCATCTTCTTTTTC-GTACC--CACA


blockSeqs                     :     T                        TCCAAG                 T     AT
blockSeqs                     :     .                        .                      .     . 
blockSeqs                     :     .                        .                      .     . 
blockSeqs                     :     .                        .                      .     . 
blockSeqs                     :     .                        .                      .     . 
blockSeqs                     :     .                        .                      .     . 
blockSeqs                     :     .                        .                      .     . 
blockSeqs                     :     .                        .                      .     . 
blockSeqs                     :     .                        .                      .     . 
blockSeqs                     :     .                        .                      .     . 
blockSeqs                     :     .                        .                      .     . 
blockSeqs                     :     .                        .                      .     . 
blockSeqs                     :                              .                      .     . 
blockSeqs                     :                              .                      .     . 
blockSeqs                     :                              .                      .     . 
blockSeqs                     :                              .                      .     . 


blockSeqCons                  : 
originalCons                  : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
finalCons                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT

lowQualScore                  :     3                        666666                 2     33        
lowQualScore                  :     .                        ......                 .     ..        
lowQualScore                  :     1                        888888                 4     22        
consensus                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
Reference ( family-894 )      : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
gi|142178                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCAGCATCCTCTTTTTC-ATGCC--CACATTTT
gi|142179                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCATCCTCTTTTTC-ATGCC--CACATTTT
gi|142180                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCATCCTCTTTTTC-ATGCC--CATATTTT
gi|142181                     : AAAATGAAGGACAATGCATGAAATAGTGT------TCAGCGTCCTCTTTTTA-ATGCT--CACTTTTT
gi|142182                     : AAAA-GAAGGACATTGCATGAAAAAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
gi|142183                     : AAAA-GAAGGATATTGCATGAAAAAGTGT------TCGGCATCCTCTTTTTC-ATGCC--CACATTTT
gi|142184                     : AAAA-GCAGGACATTACATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATACC--AACATTTT
gi|142185                     : AACA-GAAGGACATTGCATGAAATAGTCT------TTGGCATCCTCTTTTTT-ATGCC--CACA
gi|142186                     : AAAA-GAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCGTTGTC-ATGCCATCATAT
gi|142187                     : AAAA-GAAGGTCATAGCATGAAAAAGTGT------TCTGCG---TCTTTTTCTATGCC--CACATCTT
gi|142188                     :  AAA-AAAGGACATTGCATGAAATAGTGT------TCGGCGTCCTCTTTTTC-ATGCC--CACATTTT
gi|142189                     :  AAA-AAAGGCAATTGCATGAAATAGTGT------TCGGTAACCTCTTTTTC-ATGCC--CATATTTT
gi|142190                     :  AAA-GAAGGACATTGCATGAAACAATGCTCCAAGTCAGTATCCTCTTTTTC-GTGCT--CACATTTT
gi|142191                     :       AAGGACAATGCATGAAATAGTGT------TCAGCGTCCTCTTTTTA-ATGCT--CATATT
gi|142192                     :       AAGGACAATGCATGAAATAGTGC------TCAGCGTCCTCTTTTTA-ATGCT--CATATT
gi|142193                     :       AAGGACAATGCCTGAAATAGTGT------TCAGCGTCCTCTTTTTA-ATGCT--CATATT
gi|142194                     :          GACATTGCATAAAATAATGA------TCGGCATCTTCTTTTTC-GTACC--CACA