lowQualScore : 1 1
lowQualScore : 2 6 6 4
lowQualScore : . . . .
lowQualScore : 5 9 6 6
consensus : CGAAAGACTTTAGAAA-CGCAACACTCAGATAAACAGCAATAAAACATTGAGTT
Reference ( gi|15320 ) : CGAAAGACTTTAGAAA-CGCTACACTCAGATAAACAGCAATGAAACATTGTGTT
gi|15318 : CGAAAGACTTTAGAAA-CGTAATATTCAGATAAACAGCAATAAAATATTGAGTT
gi|15319 : CGGAAGACTTTAGAAA-TGCAATACTCAGATAAACTGCAATAAAACATTGAGTT
gi|15326 : CGAAAGAATTTAGAAA-CGCAAATCTCAGATAAACACCAATAAAACATTG
gi|15327 : CGATAGACTTAAGAAA-CATGACACCCAGATAAACAGAAATAAAACATTGAGTTattt
gi|15321 : CGAAAGACTTTAGAA--CAAAGCACTCATATAAACAGCAATAAAATATTGAGTT
gi|15322 : CGAAAAATTTTAGAAA-CACAACACTTAGATAAACAGCAATAACATATT
gi|15325 : CGAAAGACTTTACAAA-CGCAACACGCCGATAAACAGAACTAAAATATTGAGTcaatt
gi|15323 : CGAAACCTTTTAGAAA-CGCATCACTCAGATAAACAGCAATAAAA
gi|15324 : CGAAAGACTTTAGAAA-TGCAACTCTCAGACCAACAGCAA
gi|15328 : GAAAGACTTTAAAAA-CGCAACACTCGGATGAACAGCAATAAAACCTTGAGTT
gi|15329 : GAAAGACTTCAGAAA-CGCAGCACTCAGTTAAACAGCATTAACACATTGAGTT
gi|15330 : GAAAGACTTTAGAAA-TGCAAAACTCCAATAAACAGCAGTAAAACAT
gi|15333 : AAAGTATTTAGAAA-TGCAAAACTCAGATAAACAGCAATTAAACATTGTGTTagag
gi|15332 : AAAGACTTTAGAAAACGCATCACTCAGATAAACAGCATTAAAACATTGAGTT
gi|15331 : AAAGACTTTAGAAA-TTCAGTACTCATGTAAACAGCAATACAATATTGAGTT
gi|15334 : TCTAGAAA-CGCATCACTCAGATAAACAACAATAAAATATTGAGTT
Alignments
lowQualScore : 2
lowQualScore : .
lowQualScore : 4
consensus : CGAAAGACTTTAGAAA-CGCAACACTCAGATAAACAGCAATAAAACATTGAGTT
Reference ( family-890 ) : CGAAAGACTTTAGAAA-CGCAACACTCAGATAAACAGCAATAAAACATTGAGTT
gi|15318 : CGAAAGACTTTAGAAA-CGTAATATTCAGATAAACAGCAATAAAATATTGAGTT
gi|15319 : CGGAAGACTTTAGAAA-TGCAATACTCAGATAAACTGCAATAAAACATTGAGTT
gi|15320 : CGAAAGACTTTAGAAA-CGCTACACTCAGATAAACAGCAATGAAACATTGTGTT
gi|15321 : CGAAAGACTTTAGAA--CAAAGCACTCATATAAACAGCAATAAAATATTGAGTT
gi|15322 : CGAAAAATTTTAGAAA-CACAACACTTAGATAAACAGCAATAACATATTCAATT
gi|15323 : CGAAACCTTTTAGAAA-CGCATCACTCAGATAAACAGCAATAAAA
gi|15324 : CGAAAGACTTTAGAAA-TGCAACTCTCAGACCAACAGCAA
gi|15325 : CGAAAGACTTTACAAA-CGCAACACGCCGATAAACAGAACTAAAATATTGAGT
gi|15326 : CGAAAGAATTTAGAAA-CGCAAATCTCAGATAAACACCAATAAAACATTGATTT
gi|15327 : CGATAGACTTAAGAAA-CATGACACCCAGATAAACAGAAATAAAACATTGAGTT
gi|15328 : GAAAGACTTTAAAAA-CGCAACACTCGGATGAACAGCAATAAAACCTTGAGTT
gi|15329 : GAAAGACTTCAGAAA-CGCAGCACTCAGTTAAACAGCATTAACACATTGAGTT
gi|15330 : GAAAGACTTTAGAAA-TGCAAAACTCCAATAAACAGCAGTAAAACATAGAG
gi|15331 : AAAGACTTTAGAAA-TTCAGTACTCATGTAAACAGCAATACAATATTGAGTT
gi|15332 : AAAGACTTTAGAAAACGCATCACTCAGATAAACAGCATTAAAACATTGAGTT
gi|15333 : AAAGTATTTAGAAA-TGCAAAACTCAGATAAACAGCAATTAAACATTGTGTT
gi|15334 : TCTAGAAA-CGCATCACTCAGATAAACAACAATAAAATATTGAGTT
Alignments
lowQualScore : 2
lowQualScore : .
lowQualScore : 4
consensus : CGAAAGACTTTAGAAA-CGCAACACTCAGATAAACAGCAATAAAACATTGAGTT
Reference ( family-890 ) : CGAAAGACTTTAGAAA-CGCAACACTCAGATAAACAGCAATAAAACATTGAGTT
gi|15318 : CGAAAGACTTTAGAAA-CGTAATATTCAGATAAACAGCAATAAAATATTGAGTT
gi|15319 : CGGAAGACTTTAGAAA-TGCAATACTCAGATAAACTGCAATAAAACATTGAGTT
gi|15320 : CGAAAGACTTTAGAAA-CGCTACACTCAGATAAACAGCAATGAAACATTGTGTT
gi|15321 : CGAAAGACTTTAGAA--CAAAGCACTCATATAAACAGCAATAAAATATTGAGTT
gi|15322 : CGAAAAATTTTAGAAA-CACAACACTTAGATAAACAGCAATAACATATTCAATT
gi|15323 : CGAAACCTTTTAGAAA-CGCATCACTCAGATAAACAGCAATAAAA
gi|15324 : CGAAAGACTTTAGAAA-TGCAACTCTCAGACCAACAGCAA
gi|15325 : CGAAAGACTTTACAAA-CGCAACACGCCGATAAACAGAACTAAAATATTGAGT
gi|15326 : CGAAAGAATTTAGAAA-CGCAAATCTCAGATAAACACCAATAAAACATTGATTT
gi|15327 : CGATAGACTTAAGAAA-CATGACACCCAGATAAACAGAAATAAAACATTGAGTT
gi|15328 : GAAAGACTTTAAAAA-CGCAACACTCGGATGAACAGCAATAAAACCTTGAGTT
gi|15329 : GAAAGACTTCAGAAA-CGCAGCACTCAGTTAAACAGCATTAACACATTGAGTT
gi|15330 : GAAAGACTTTAGAAA-TGCAAAACTCCAATAAACAGCAGTAAAACATAGAG
gi|15331 : AAAGACTTTAGAAA-TTCAGTACTCATGTAAACAGCAATACAATATTGAGTT
gi|15332 : AAAGACTTTAGAAAACGCATCACTCAGATAAACAGCATTAAAACATTGAGTT
gi|15333 : AAAGTATTTAGAAA-TGCAAAACTCAGATAAACAGCAATTAAACATTGTGTT
gi|15334 : TCTAGAAA-CGCATCACTCAGATAAACAACAATAAAATATTGAGTT
blockSeqs : A
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqCons :
originalCons : CGAAAGACTTTAGAAA-CGCAACACTCAGATAAACAGCAATAAAACATTGAGTT
finalCons : CGAAAGACTTTAGAAA-CGCAACACTCAGATAAACAGCAATAAAACATTGAGTT
Alignments
lowQualScore : 2
lowQualScore : .
lowQualScore : 4
consensus : CGAAAGACTTTAGAAA-CGCAACACTCAGATAAACAGCAATAAAACATTGAGTT
Reference ( family-890 ) : CGAAAGACTTTAGAAA-CGCAACACTCAGATAAACAGCAATAAAACATTGAGTT
gi|15318 : CGAAAGACTTTAGAAA-CGTAATATTCAGATAAACAGCAATAAAATATTGAGTT
gi|15319 : CGGAAGACTTTAGAAA-TGCAATACTCAGATAAACTGCAATAAAACATTGAGTT
gi|15320 : CGAAAGACTTTAGAAA-CGCTACACTCAGATAAACAGCAATGAAACATTGTGTT
gi|15321 : CGAAAGACTTTAGAA--CAAAGCACTCATATAAACAGCAATAAAATATTGAGTT
gi|15322 : CGAAAAATTTTAGAAA-CACAACACTTAGATAAACAGCAATAACATATTCAATT
gi|15323 : CGAAACCTTTTAGAAA-CGCATCACTCAGATAAACAGCAATAAAA
gi|15324 : CGAAAGACTTTAGAAA-TGCAACTCTCAGACCAACAGCAA
gi|15325 : CGAAAGACTTTACAAA-CGCAACACGCCGATAAACAGAACTAAAATATTGAGT
gi|15326 : CGAAAGAATTTAGAAA-CGCAAATCTCAGATAAACACCAATAAAACATTGATTT
gi|15327 : CGATAGACTTAAGAAA-CATGACACCCAGATAAACAGAAATAAAACATTGAGTT
gi|15328 : GAAAGACTTTAAAAA-CGCAACACTCGGATGAACAGCAATAAAACCTTGAGTT
gi|15329 : GAAAGACTTCAGAAA-CGCAGCACTCAGTTAAACAGCATTAACACATTGAGTT
gi|15330 : GAAAGACTTTAGAAA-TGCAAAACTCCAATAAACAGCAGTAAAACATAGAG
gi|15331 : AAAGACTTTAGAAA-TTCAGTACTCATGTAAACAGCAATACAATATTGAGTT
gi|15332 : AAAGACTTTAGAAAACGCATCACTCAGATAAACAGCATTAAAACATTGAGTT
gi|15333 : AAAGTATTTAGAAA-TGCAAAACTCAGATAAACAGCAATTAAACATTGTGTT
gi|15334 : TCTAGAAA-CGCATCACTCAGATAAACAACAATAAAATATTGAGTT