lowQualScore : 0 4 444 99999999
lowQualScore : . . ... ........
lowQualScore : 7 9 444 11111111
consensus : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
Reference ( gi|95561 ) : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95560 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95562 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---GACGTGCTTTG--------ATATGCACTA
gi|95563 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---GACATGTTTTG--------ATATGCACTA
gi|95565 : ACGATCAACTAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTGATCTGTTAATATGCACTA
gi|95564 : ATGATCAAATAAAAAAATAAAAAAATCGTTTGAA---AACGTACTTTG--------ATATTCACTA
gi|95566 : ACGATCAAATAAAAAAATATCCAA-TCGTTCGAC---AACGTGCTTTG--------ATATGCACTA
gi|95567 : ACAGTTAACTAAAAAAATATAAAAATCGTTTGAA---AACATGCTTTG--------ATATGCACTA
gi|95568 : ACGATCAAATAAAAAAATATCAAA-TCATTCGAC---AACATGCTTTA--------ATATGCACTA
gi|95569 : ACGATCAA-CAAAAAAATATAAAA-TCGTTCGAC---AACGTGCTTTG--------ATGTGCAC
gi|95570 : ACAATCAAATAAAAAATCA----AATTGTTCGAC---AACATGCTTTG--------ATATGCACTA
gi|95571 : CAATCAAATAAAAAAATATAAAAATCGTTTGAA---AACATGCTTTG--------ATATGCACTA
gi|95573 : CGATCAACTAAAAAAATATATAATTCATTCGAA---TACGTGCTTTG--------AAGTGCAC
gi|95572 : CGATCAAATAAAAAA-TATCAAA-TC-TTCAAC---AACATGCTTTG--------ATATGCACTA
gi|95574 : GATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95575 : GATCAACTAAAAAAATATAAAAATTGTTTGAATTTAACGTGCTTTG--------ATATGCACTA
gi|95576 : AAATAAAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
Alignments
lowQualScore : 0 4 444 88888888
lowQualScore : . . ... ........
lowQualScore : 1 1 111 55555555
consensus : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
Reference ( family-888 ) : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95560 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95561 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95562 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---GACGTGCTTTG--------ATATGCACTA
gi|95563 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---GACATGTTTTG--------ATATGCACTA
gi|95564 : ATGATCAAATAAAAAAATAAAAAAATCGTTTGAA---AACGTACTTTG--------ATATTCACTA
gi|95565 : ACGATCAACTAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTGATCTGTTAATATGCACTA
gi|95566 : ACGATCAAATAAAAAAATATCCAA-TCGTTCGAC---AACGTGCTTTG--------ATATGCACTA
gi|95567 : ACAGTTAACTAAAAAAATATAAAAATCGTTTGAA---AACATGCTTTG--------ATATGCACTA
gi|95568 : ACGATCAAATAAAAAAATATCAAA-TCATTCGAC---AACATGCTTTA--------ATATGCACTA
gi|95569 : ACGATCAA-CAAAAAAATATAAAA-TCGTTCGAC---AACGTGCTTTG--------ATGTGCAC
gi|95570 : ACAATCAAATAAAAAATCA----AATTGTTCGAC---AACATGCTTTG--------ATATGCACTA
gi|95571 : CAATCAAATAAAAAAATATAAAAATCGTTTGAA---AACATGCTTTG--------ATATGCACTA
gi|95572 : CGATCAAATAAAAAA-TATCAAA-TC-TTCAAC---AACATGCTTTG--------ATATGCACTA
gi|95573 : CGATCAACTAAAAAAATATATAATTCATTCGAA---TACGTGCTTTG--------AAGTGCAC
gi|95574 : GATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95575 : GATCAACTAAAAAAATATAAAAATTGTTTGAATTTAACGTGCTTTG--------ATATGCACTA
gi|95576 : AAATAAAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
Alignments
lowQualScore : 0 4 444 88888888
lowQualScore : . . ... ........
lowQualScore : 1 1 111 55555555
consensus : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
Reference ( family-888 ) : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95560 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95561 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95562 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---GACGTGCTTTG--------ATATGCACTA
gi|95563 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---GACATGTTTTG--------ATATGCACTA
gi|95564 : ATGATCAAATAAAAAAATAAAAAAATCGTTTGAA---AACGTACTTTG--------ATATTCACTA
gi|95565 : ACGATCAACTAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTGATCTGTTAATATGCACTA
gi|95566 : ACGATCAAATAAAAAAATATCCAA-TCGTTCGAC---AACGTGCTTTG--------ATATGCACTA
gi|95567 : ACAGTTAACTAAAAAAATATAAAAATCGTTTGAA---AACATGCTTTG--------ATATGCACTA
gi|95568 : ACGATCAAATAAAAAAATATCAAA-TCATTCGAC---AACATGCTTTA--------ATATGCACTA
gi|95569 : ACGATCAA-CAAAAAAATATAAAA-TCGTTCGAC---AACGTGCTTTG--------ATGTGCAC
gi|95570 : ACAATCAAATAAAAAATCA----AATTGTTCGAC---AACATGCTTTG--------ATATGCACTA
gi|95571 : CAATCAAATAAAAAAATATAAAAATCGTTTGAA---AACATGCTTTG--------ATATGCACTA
gi|95572 : CGATCAAATAAAAAA-TATCAAA-TC-TTCAAC---AACATGCTTTG--------ATATGCACTA
gi|95573 : CGATCAACTAAAAAAATATATAATTCATTCGAA---TACGTGCTTTG--------AAGTGCAC
gi|95574 : GATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95575 : GATCAACTAAAAAAATATAAAAATTGTTTGAATTTAACGTGCTTTG--------ATATGCACTA
gi|95576 : AAATAAAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
blockSeqs : A TTT ATCTGTTA
blockSeqs : A . .
blockSeqs : A . .
blockSeqs : A . .
blockSeqs : A . .
blockSeqs : A . .
blockSeqs : A . .
blockSeqs : A . .
blockSeqs : T . .
blockSeqs : A . .
blockSeqs : A . .
blockSeqs : A . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqCons :
originalCons : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
finalCons : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
Alignments
lowQualScore : 0 4 444 88888888
lowQualScore : . . ... ........
lowQualScore : 1 1 111 55555555
consensus : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
Reference ( family-888 ) : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95560 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95561 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95562 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---GACGTGCTTTG--------ATATGCACTA
gi|95563 : ACGATCAAATAAAAAAATATAAAAATCGTTCGAA---GACATGTTTTG--------ATATGCACTA
gi|95564 : ATGATCAAATAAAAAAATAAAAAAATCGTTTGAA---AACGTACTTTG--------ATATTCACTA
gi|95565 : ACGATCAACTAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTGATCTGTTAATATGCACTA
gi|95566 : ACGATCAAATAAAAAAATATCCAA-TCGTTCGAC---AACGTGCTTTG--------ATATGCACTA
gi|95567 : ACAGTTAACTAAAAAAATATAAAAATCGTTTGAA---AACATGCTTTG--------ATATGCACTA
gi|95568 : ACGATCAAATAAAAAAATATCAAA-TCATTCGAC---AACATGCTTTA--------ATATGCACTA
gi|95569 : ACGATCAA-CAAAAAAATATAAAA-TCGTTCGAC---AACGTGCTTTG--------ATGTGCAC
gi|95570 : ACAATCAAATAAAAAATCA----AATTGTTCGAC---AACATGCTTTG--------ATATGCACTA
gi|95571 : CAATCAAATAAAAAAATATAAAAATCGTTTGAA---AACATGCTTTG--------ATATGCACTA
gi|95572 : CGATCAAATAAAAAA-TATCAAA-TC-TTCAAC---AACATGCTTTG--------ATATGCACTA
gi|95573 : CGATCAACTAAAAAAATATATAATTCATTCGAA---TACGTGCTTTG--------AAGTGCAC
gi|95574 : GATCAAATAAAAAAATATAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA
gi|95575 : GATCAACTAAAAAAATATAAAAATTGTTTGAATTTAACGTGCTTTG--------ATATGCACTA
gi|95576 : AAATAAAAAAATCGTTCGAA---AACGTGCTTTG--------ATATGCACTA