lowQualScore                  :             88 2                      444        2     6   
lowQualScore                  :             .. .                      ...        .     .   
lowQualScore                  :             22 5                      111        7     0   
consensus                     : CAAAGGACTCAAG-G-TCCTGAGAGGCGCCATTTGTTT---GTTTGTTT-GAATATTTA
Reference ( gi|34349 )        : CAAAGGACTCAAA-G-TCCTGAGAGGCGCCATTTGTTT---GTTTGTTT-GAATACTTA
gi|34347                      : CAAAGGACTCAAG-G-TCATGAGAGGCGCCATTTGTTT---GTTTGTTT-GAATATTTA
gi|34348                      : CAAAAGACTCGAG-G-TCCTGAGAGGCGCCATTTGTTT---GTTTGTTT-GAATATTTA
gi|34350                      : CAAAGGACTCAAG-G-TCCGGAGAGGGGCCATTTGTTT---GTTTGTTT-GAATATTTA
gi|34351                      : CAAAGGACTCAAG-G-TCCTGAAAGGAACCATTTGTTT---GTTTATTT-GAATATTTA
gi|34352                      : CAAAGGACTCAAG-G-TACTGAGAGGCGCCATTTGTTT---GTTTGTTT-G
gi|34353                      : CAAAGGACTCGAG-G-TTCTGAGATGCACCATTTGTTT---GTTTGTTT-GAATATtttgaatatt
gi|34354                      : CAAAGGATTCAAG-G-TCCTGAGAGGCACCATTTGTTT---CTTTGTTT-AA
gi|34355                      : CAAAAAACCTAAA-GGTCCTGAGAGATGCCATTTGTTT---GTTTGGTT-GATTATTTA
gi|34356                      : CAAAGGACCCAAG-G-TCTTAAGAGGCGCCATTTGTTT---G
gi|34357                      :  AAAGGACTCCAG-G-TACTGAAAGGCACCATTTGTTT---GTTTGTTCAGAATAaatattta
gi|34361                      :  AAAGAAATCAAATG-TCCCGAGAGTCGCCA---ATTT---GTTTGTTT-GAATATTTAtata
gi|34360                      :  AAAGAAATCAAATG-TCCCGAGAGTCGCCA---ATTT---GTTTGTTT-GAATATTTA
gi|34358                      :  AAAGGACTCCAG-G-TCCTGAGAGTTGCCATTTGTTTAAGG--TATTT-CAATATTTA
gi|34359                      :  AAAGGACTAAAG-G-TCTTGAGAGTCGCCATTT--------TTTGCTC-GAATATTT
gi|34362                      :   AAGGACTCATG-G-TCTTTAAAGGTGCCATTTGTTT---GTTGGTTT-GAATATTTA
gi|34363                      :       ACTCAAG-G-TCCTGAGAGGAGCCATTTGTTT---G
gi|34364                      :                  CCTGAGAGGCGCCATTTGTTT---GTTTGTTT-GAATATTTA

lowQualScore                  :         2     4                4444       333        2         
lowQualScore                  :         .     .                ....       ...        .         
lowQualScore                  :         4     7                7777       999        4         
consensus                     : CAAAGGAC-TCAAG-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
Reference ( family-860 )      : CAAAGGAC-TCAAG-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
gi|34347                      : CAAAGGAC-TCAAG-GTCATGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
gi|34348                      : CAAAAGAC-TCGAG-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
gi|34349                      : CAAAGGAC-TCAAA-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATACTTA
gi|34350                      : CAAAGGAC-TCAAG-GTCCGGAGAGGGGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
gi|34351                      : CAAAGGAC-TCAAG-GTCCTGAAAGGAACCA----TTTGTTT---GTTTATTT-GAATATTTA
gi|34352                      : CAAAGGAC-TCAAG-GTACTGAGAGGCGCCATTTGTTTGTTT---GTTTGTTT-GAATATT
gi|34353                      : CAAAGGAC-TCGAG-GTTCTGAGATGCACCA----TTTGTTT---GTTTGTTT-GAATATT
gi|34354                      : CAAAGGAT-TCAAG-GTCCTGAGAGGCACCA----TTTGTTT---CTTTGTTT-AA
gi|34355                      : CAAAAAACCTAAAG-GTCCTGAGAGATGCCA----TTTGTTT---GTTTGGTT-GATTATTTA
gi|34356                      : CAAAGGAC-CCAAG-GTCTTAAGAGGCGCCA---------------TTTGTTT-GAATATTTA
gi|34357                      :  AAAGGAC-TCCAG-GTACTGAAAGGCACCA----TTTGTTT---GTTTGTTCAGAATATATA
gi|34358                      :  AAAGGAC-TCCAG-GTCCTGAGAGTTGCCA----TTTGTTTAAGG--TATTT-CAATATTTA
gi|34359                      :  AAAGGAC-TAAAG-GTCTTGAGAGTCGCCA----TTT--------TTTGCTC-GAATATTT
gi|34360                      :  AAAGAAA-TCAAATGTCCCGAGAGTCGCCA-------ATTT---GTTTGTTT-GAATATTTA
gi|34361                      :  AAAGAAA-TCAAATGTCCCGAGAGTCGCCA-------ATTT---GTTTGTTT-GAATATTTA
gi|34362                      :   AAGGAC-TCATG-GTCTTTAAAGGTGCCA----TTTGTTT---GTTGGTTT-GAATATTTA
gi|34363                      :       AC-TCAAG-GTCCTGAGAGGAGCCA----TTTGTTT---G
gi|34364                      :                  CCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA

lowQualScore                  :         2     4                4444       333        2         
lowQualScore                  :         .     .                ....       ...        .         
lowQualScore                  :         4     7                7777       999        4         
consensus                     : CAAAGGAC-TCAAG-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
Reference ( family-860 )      : CAAAGGAC-TCAAG-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
gi|34347                      : CAAAGGAC-TCAAG-GTCATGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
gi|34348                      : CAAAAGAC-TCGAG-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
gi|34349                      : CAAAGGAC-TCAAA-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATACTTA
gi|34350                      : CAAAGGAC-TCAAG-GTCCGGAGAGGGGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
gi|34351                      : CAAAGGAC-TCAAG-GTCCTGAAAGGAACCA----TTTGTTT---GTTTATTT-GAATATTTA
gi|34352                      : CAAAGGAC-TCAAG-GTACTGAGAGGCGCCATTTGTTTGTTT---GTTTGTTT-GAATATT
gi|34353                      : CAAAGGAC-TCGAG-GTTCTGAGATGCACCA----TTTGTTT---GTTTGTTT-GAATATT
gi|34354                      : CAAAGGAT-TCAAG-GTCCTGAGAGGCACCA----TTTGTTT---CTTTGTTT-AA
gi|34355                      : CAAAAAACCTAAAG-GTCCTGAGAGATGCCA----TTTGTTT---GTTTGGTT-GATTATTTA
gi|34356                      : CAAAGGAC-CCAAG-GTCTTAAGAGGCGCCA---------------TTTGTTT-GAATATTTA
gi|34357                      :  AAAGGAC-TCCAG-GTACTGAAAGGCACCA----TTTGTTT---GTTTGTTCAGAATATATA
gi|34358                      :  AAAGGAC-TCCAG-GTCCTGAGAGTTGCCA----TTTGTTTAAGG--TATTT-CAATATTTA
gi|34359                      :  AAAGGAC-TAAAG-GTCTTGAGAGTCGCCA----TTT--------TTTGCTC-GAATATTT
gi|34360                      :  AAAGAAA-TCAAATGTCCCGAGAGTCGCCA-------ATTT---GTTTGTTT-GAATATTTA
gi|34361                      :  AAAGAAA-TCAAATGTCCCGAGAGTCGCCA-------ATTT---GTTTGTTT-GAATATTTA
gi|34362                      :   AAGGAC-TCATG-GTCTTTAAAGGTGCCA----TTTGTTT---GTTGGTTT-GAATATTTA
gi|34363                      :       AC-TCAAG-GTCCTGAGAGGAGCCA----TTTGTTT---G
gi|34364                      :                  CCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA


blockSeqs                     :         C     T                TTTG       AAG        A
blockSeqs                     :         .     T                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :         .     .                .          .          .
blockSeqs                     :                                .          .           


blockSeqCons                  : 
originalCons                  : CAAAGGAC-TCAAG-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
finalCons                     : CAAAGGAC-TCAAG-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA

lowQualScore                  :         2     4                4444       333        2         
lowQualScore                  :         .     .                ....       ...        .         
lowQualScore                  :         4     7                7777       999        4         
consensus                     : CAAAGGAC-TCAAG-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
Reference ( family-860 )      : CAAAGGAC-TCAAG-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
gi|34347                      : CAAAGGAC-TCAAG-GTCATGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
gi|34348                      : CAAAAGAC-TCGAG-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
gi|34349                      : CAAAGGAC-TCAAA-GTCCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATACTTA
gi|34350                      : CAAAGGAC-TCAAG-GTCCGGAGAGGGGCCA----TTTGTTT---GTTTGTTT-GAATATTTA
gi|34351                      : CAAAGGAC-TCAAG-GTCCTGAAAGGAACCA----TTTGTTT---GTTTATTT-GAATATTTA
gi|34352                      : CAAAGGAC-TCAAG-GTACTGAGAGGCGCCATTTGTTTGTTT---GTTTGTTT-GAATATT
gi|34353                      : CAAAGGAC-TCGAG-GTTCTGAGATGCACCA----TTTGTTT---GTTTGTTT-GAATATT
gi|34354                      : CAAAGGAT-TCAAG-GTCCTGAGAGGCACCA----TTTGTTT---CTTTGTTT-AA
gi|34355                      : CAAAAAACCTAAAG-GTCCTGAGAGATGCCA----TTTGTTT---GTTTGGTT-GATTATTTA
gi|34356                      : CAAAGGAC-CCAAG-GTCTTAAGAGGCGCCA---------------TTTGTTT-GAATATTTA
gi|34357                      :  AAAGGAC-TCCAG-GTACTGAAAGGCACCA----TTTGTTT---GTTTGTTCAGAATATATA
gi|34358                      :  AAAGGAC-TCCAG-GTCCTGAGAGTTGCCA----TTTGTTTAAGG--TATTT-CAATATTTA
gi|34359                      :  AAAGGAC-TAAAG-GTCTTGAGAGTCGCCA----TTT--------TTTGCTC-GAATATTT
gi|34360                      :  AAAGAAA-TCAAATGTCCCGAGAGTCGCCA-------ATTT---GTTTGTTT-GAATATTTA
gi|34361                      :  AAAGAAA-TCAAATGTCCCGAGAGTCGCCA-------ATTT---GTTTGTTT-GAATATTTA
gi|34362                      :   AAGGAC-TCATG-GTCTTTAAAGGTGCCA----TTTGTTT---GTTGGTTT-GAATATTTA
gi|34363                      :       AC-TCAAG-GTCCTGAGAGGAGCCA----TTTGTTT---G
gi|34364                      :                  CCTGAGAGGCGCCA----TTTGTTT---GTTTGTTT-GAATATTTA