lowQualScore : 11111111111111111111111111111111
lowQualScore : 1 2222222 111111 11 11111 3333333333333333333333 11 33333333333 111 55555555555555555555555555555555 1
lowQualScore : 33 2 1 0 2 4 4 1111111 000000 44 8 999999 11 88888 999 6666666666666666666666 2 8888 2 55 55 00000000000 000 77 44 55555555555555555555555555555555 44 1 1 4 2 44 5 0 7 7
lowQualScore : .. . . . . . . ....... ...... .. . ...... .. ..... ... ...................... . .... . .. .. ........... ... .. .. ................................ .. . . . . .. . . . .
lowQualScore : 44 5 1 1 4 8 8 4444444 666666 66 9 888888 00 44444 888 5555555555555555555555 1 9999 1 99 00 00000000000 000 99 55 22222222222222222222222222222222 99 9 9 5 8 99 0 6 3 3
consensus : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGNTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-AT--A----AA------A--TACAAT------AAA--CAAA----TA---TATAA-AAC-----GA-----------T-A----T-AAAAGCA--CACA-----------ACA---AA--AATA--AT----------------------ANAACACN--TGGTAGACAGTANCGAACTAACTGCCATAAGCGGATAGGATC-TNGCTCCGTGGGCGCTGGNCACCNGATGATATA-AAA-ATAAAA
Reference ( gi|23679 ) : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-AT--A----AA------A--TAAAAT------AAA--CAAA----TA---TATAA-CAT-----GA-----------T-A----T-AAAAGCA--CACA-----------ACA---AA--AATA--AT----------------------NNNNNNNNNNTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23678 : ATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATATA-AAA-AT--A----AA------A--TACAAT------AAA--CAAA----TA---TATAG-CAT-----GA-----------T-A----T-AAAAGCA--CACA-----------ACA---AA--AATA--ATATTGAACACGAAAAATACAATAATAATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23675 : ATAATAGTACATC--TGGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATAGA-AAA-ATA-A----AA------A--TACAAT------AAA--CAAA----TA---TATAA-CAT-----GA-----------TAA----T-AAAA-CA--CAAA-----------ACA---AA--AATA--ATATCAAACACCAAAATACTATA-ATAGTACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23681 : aATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATATA-AAA-ATTCAATT-AA------A--TACAAT------AAA--CAAA----TA---TATAA-CAT-----GA-----------T-A----T-AAAAGCA--CACA-----------ACA---AA--AATA--ATATCGAATACCAAAATATAATA-ATAGTACATCTGGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATAGA-AAA-ATAAAA
gi|23673 : ATAATNNNNNNNNNNTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATA-A----AA------A--TACAAT------AAA--CAAA----CA---TACAA-AGC-----GG-----------T-A----T-AAAAGCA--CACA-----------ACA---AA--AATA--ATATTGAACATGAAAAATACAATAATAATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23680 : aATAATAGTACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATA-A----AA------A--TACAAT------AAA--CAAA----CA---CACAA-AGC-----GG-----------T-A----T-AAAATCA--CACA-----------ACA---AA--AATATTATTGAACGCGAAATACAATA----ATAATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACA-AAA-ATAA
gi|23672 : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATACA-AAA-ATA-A----AA------A--TACAAT------AAA--CAAA----TA---TATAA-AAC-----GA-----------T-A----T-AAAAACA--AATATTCTATTAAATACA---AA--AATA--
gi|23671 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACA-AAA-ATA-A----AA------A--TACAAT------AAA--CAAA----TA---TATAA-AAC-----GA-----------T-A----T-AAAAACA--AATATTCTATTAAATACA---AA--AATA--ggaattacaataagcaatatatgaaacaatataaacaaacacaaaacaaatacacaaggtaaacagtatagaactaactgccataagcggataggctcttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23674 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACA-AAA-ATA-A----AA------A--TACAAT------AAA--TAAA----TA---TATAA-AAC-----AA-----------T-A----C-AAAAACA--AATATTCTATTAAATACA---AA--AATA--gaaattacaataagcaatatatgaaacaatataaacaaacacaaaaccaatacacaaggtaaacagtatagcacttactgccataagcggataggctctttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23687 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-AT--A----AA------A--ggaattacaataagcaatatatgaaacaatataaataaacacaaaaaaaatacacaaggtaaacagtatagaactaactgcctaagcggataggctctttgctccgtgagcgctgctcacctaatgatatataaacataa
gi|23686 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATATA-AAA-AT--A----AA------A--
gi|23688 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATATA-AAA-A
gi|23677 : aggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaagaacaaacaaaacagtatataaatatgaaaatgaagtaatattaaaaccatcccgacacacaattgAATAATACATC--TGGAACACAGTAATGGACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACC-GATGATACA-GAA-A---A----AA------A--AACGAT------AAA--CAAA----TA---TATAA-AAT-----GA-----------T-A----T-AAAAGCA--CACA-----------ACA---AA--AATA--AT----------------------
gi|23676 : aaaAAAAATACACA--AGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-AC--A----TA------A--AAACATCATGCCAAACCCAAC----TATTTTATAA--ATAAGTAGA-----------T-A----T-ATAGGTAATTACA-----------ACA---Aattgaatacaaaaataaaaaatacaataagcaatatatgaaatgatataaacaaacacaaaacaaatacataaggtaaacagtatagaactttctaccataagcggataggctctttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23683 : aaaAATACACA--AGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTC-TTGCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACAT--A----AAAAC---A--TCATATC-----AAACCCAAC----TATT-TATAA--ATAAGTAGA-----------T-A----T-ATAGGTAATTACA-----------ACA---Aggacacataaataaatgcagtattataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23682 : AATACACA--AGGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-AC--A----TA------A--ggacacataaataaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23684 : AATACATA--AGGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACAT--A----AAAACATCA--TAAATT------AAACCCAAC----TA---T-TAA-
gi|23685 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACAT--A----AAAAC---A--TCATATC-----AAACCCAAC----TATTTTATAA--ATAAGTAGA-----------T-A----T-ATAGGTAATTACA-----------ACA---Aacccaactatttataaataaatagttatataggtaattacatacaaggacacataaataagcgtagtattataaacataaagcaaaatgtatatagaacaaacaaatagtagaatagacagatggacacaacaccagaagctgat
gi|23689 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-AC--A----TA------A--ggacacataaataaatgcagtatcataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23672 : acaaATACA-AAA-AT--AGG--AA------T--TACAAT------AAG--CAA-----TA---TATGA-AAC-----AA-----------T-A----T-AAA--CA--AACA------------CA---AA--ACAA--AT----------------------ACACAA-----GGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTC-TTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23677 : aataataatacatctggtagacagtaacgaactaactgccataagcggctaggatctagctctgtgggcgctggataccagatgatacaaaaataaaaatacaataaacaaatatataaaacgatataaaaacaaatattctattaaATACA-AAA-AT--A----AA------AAATACAAT------AAG--CAA-----TA---TATGA-AAT-----GA-----------T-A----T-AAACAAA--CACA-----------AAA---CA--AATAC-AT----------------------AA---------GGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23671 : aaaaataatacatctggaacacagtaatggactaactgccataagcggctaggatctagctccgtgggcgctggataccgatgatacagaaaaaaaaacgataaacaaatatataaaatgatataaaagcacacaacaaaaataatattgaATACA-AAA-AT--A----GA------AATTACAAT------AAG--CAA-----TA---TATGA-AAC-----AA-----------T-A----T-AAA--CA--AACA------------CA---AA--ACCA--AT----------------------ACACAA-----GGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23674 : aataataatacatctggtagacagtaacgaactaactgccataagcggctaggatctagctctgtgggtgctggataccagatgatacaaaaataaaaatacaataaacaaatatataaaacgatataaaaacaaatattctattaaATACA-AAA-AT--AGG--AA------T--TACAAT------AAG--CAA-----TA---TATGA-AAC-----AA-----------T-A----T-AAATAAA--CACA-----------AAA---AA--AATA--------------------------------CACAAGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAA
gi|23687 : aataataatacatctggtagacagtaacgaactaactgccataagcggctaggatctagctctgtgggcgctggataccagtttatacaaaaataaaaatacaataaataaatatataaaacaatacaaaaacaaatattctattaaATATA-AAA-AT--AGCAGAA------A--AGGAAC------AAA--CAAAACAGTA---TATAAATAT-----GAAAATGAAG---T-AAAAAT-AAAACCAT-CCCG-----------ACACACAATTGATA--AT----------------------AATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-ATAAAA
gi|23686 : acacaaggtgatataaaatcaaaaatataataaacaatATATA-AAA-AT--AGCAGAA------A--AGGAAC------AAA--CAAAACAGTA---TATAAATAT-----GAAAATGAAG---T-AAAAAT-AAAACCAT-CCCG-----------ACACACAATTGATA--AT----------------------AATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATATA-AAA-ATAAAA
gi|23688 : acacaaggtgatataaaatcaaaaatataataaacaatATATA-AAA-AT--AGCAGAA------A--AAGAAC------AAA--CAAAACAGTA---TATAAATAT-----GAAAATGAAGTAAT-A----TTAAAACCAT-CCCG-----------ACACACAATTGATA--AT----------------------AATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATATA-AAA-
gi|23677 : aggtgatataaaatcaaaaatataataaacaatA---AA--AATA--AT----------------------ACATC-----TGGAACACAGTAATGGACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACC-GATGATACA-GAA-AAAAAA
gi|23676 : A---AA--AAAA--AT----------------------ACACAA-----GGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAAacgataaacaaatatataaaatgatataaaagcacacaacaaaaataatattgaatacaaaaataaaaaatacaataagcaatatatgaaatgatataaacaaacacaaaacaaatacataaggtaaacagtatagaactttctaccataagcggataggctctttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23672 : --AATA--AT----------------------AATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAAacatcatgccaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtattataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23671 : --AATA--AT----------------------AATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACA-AAA-ATAAAAatacaataaacaaatatataaaacgatataaaaacaaatattctattaaatacaaaaataggaattacaataagcaatatatgaaacaatataaacaaacacaaaacaaatacacaaggtaaacagtatagaactaactgccataagcggataggctcttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23674 : --AATA--AT----------------------AATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACA-AAA-ATAAAAatacaataaacaaatatataaaacgatataaaaacaaatattctattaaatacaaaaatagaaattacaataagcaatatatgaaacaatataaacaaacacaaaaccaatacacaaggtaaacagtatagcacttactgccataagcggataggctctttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23683 : GGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTC-TTGCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAAatacaataaataaatatataaaacaatacaaaaacaaatattctattaaatacaaaaataggaattacaataagcaatatatgaaacaatataaataaacacaaaaaaaatacacaaggtaaacagtatagaactaactgcctaagcggataggctctttgctccgtgagcgctgctcacctaatgatatataaacataa
gi|23685 : aatacacaaGGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAAacatcatatcaaacccaactatttataaataagtagatatataggtaattacaacaaggacacataaataaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23689 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAAacatcatatcaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtatcataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23682 : acaaGGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23684 : aatacacaaGGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111 444444444444444444444444444444444444 111 2222222222222222222 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 1
lowQualScore : 33 1 5 777777 6 6 555 111111111111111111111111111111111111 111 8888888888888888888 2 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 6666 33 1 3 6 1 55 1 8 8
lowQualScore : .. . . ...... . . ... .................................... ... ................... . ................................................................................................................................................................................................................................... .... .. . . . . .. . . .
lowQualScore : 77 0 0 222222 0 0 888 333333333333333333333333333333333333 555 8888888888888888888 4 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 3333 55 3 6 8 0 00 0 4 4
consensus : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----T----------A---TA-TAAAT------A-----------------CGA----------TA----T-A--A-AAGC--------A-----C---A---------------CAA---------------CA---A----------A--A-----------------------A----------------------T-A-AT--A--AN------------------A----------------------CACNT--GGTAGACAGTANNGAACTAACTGCCATAAGCGGATAGGCTCTTNGCTCCGTGGGCGCTGNNCACCNGATGATATA-AAA-ATAAAA
Reference ( family-842 ) : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGNTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----T----------A---TA-TAAA-------A-----------------CGA----------TA----T-A--A-AAGC--------A-----C---A---------------CAA---------------CA---A----------A--A-----------------------A----------------------T-A-AT--A--NA------------------A----------------------CACNT--GGTAGACAGTANCGAACTAACTGCCATAAGCGGATAGGATC-TNGCTCCGTGGGCGCTGGNCACCNGATGATATA-AAA-ATAAAA
gi|23671 : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACAAAAATA-AAA-AT---ACAATAAACAAA--TATATAAAACG--AT---ATAAAAA---CAAA----T----------ATTCTA-TTAA---------------------------A----------TA----C-A--A-AAAT--------AGAAATT---A---------------CAA---------------TA---AGCAATATATGA--A-----------------------A----------------------C-A-AT--A--TAAACAAACACAAAACCAATA----------------------CACAA--GGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23672 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATACAAAAATA-AAA-AT---ACAATAAACAAA--TATATAAAACG--AT---ATAAAAA---CAAA----TATTCTATTAAA---TA-CAAA-------AATAGGAATTACAATAAGCAA----------TA----T-ATGA-AACA--------A-----T---A---------------TAAA--------------CA---A----------A--C-----------------------A----------------------C-A-AA--A--CAAAT---------------A----------------------CACAA--GGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTC-TTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23673 : aATAATNNNNNNNNNNTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------CA-AAA-ATA--A--------AAA--TA-------CA--AT---A----AA---CAAA----C----------A---TA-CAAA-------G-----------------CGG----------TA----T-A--A-AAGC--------A-----C---A---------------CAA---------------CA---A----------A--A-----------------------A----------------------T-A-AT--ATTGA------------------ACATGAAAAATACAATAATAATACATCT--GGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23674 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACAAAAATA-AAA-AT---ACAATAAATAAA--TATATAAAACA--AT---ACAAAAA---CAAA----T----------ATTCTATTAAAT------A-----------------CAAAAATAGGAATTA----C-A--ATAAGCAATATATGA-----A---A---------------CAA---------------TA---T----------A--A-----------------------A----------------------TAA-AC--A--CAAAAAAAAT----------A----------------------CACAA--GGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAA
gi|23675 : aATAATAGTACATC--TGGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------GA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----T----------A---TA-TAAC-------A-----------------TGA----------TAA---T-A--A-AA-C--------A-----C---AAAACAAAAATAATATCAAACAC-----------CA---A----------A--ATACT-------------------A----------------------T-A-AT--A--GT------------------A----------------------CATCT--GGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23676 : aA---A----------A--A-----------------------A----------------------A-A-AT--A---------------------------------------------CACAA--GGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAA
gi|23676 : AAAAATACACA--AGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATA------TATAAACAT---A--------AAA---A-------CATCATGCCA----AACC-CAAC----T----------ATTTTA-TAAATAAGT--A------------------GA----------TA----T-A--T-AGGT--------AAT---T---A---------------CAA---------------CA---A----------G--G-----------------------A----------------------C-ACAT--A--AA------------------acatcatgccaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtattataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23677 : aaaAATAATACATC--TGGAACACAGTAATGGACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACC-GATGATA------CA-GAA-A----A--------AAA--AA-------CG--AT---A----AA---CAAA----T----------A---TA-TAAA-------A-----------------TGA----------TA----T-A--A-AAGC--------A-----C---A---------------CAA---------------CA---A----------A--A-----------------------A----------------------T-A-AT--A--taaatgcagtattataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23677 : aaaATA------CA-AAA-AT---A--------AAAAATA-------CA--AT---A----AG---CAA-----T----------A---TA-TGAA-------A-----------------TGA----------TA----T-A--A-ACAA--------A-----C---A---------------CAA---------------AA---C----------A--A-----------------------A----------------------T-A--C--A--TA------------------A-----------------------------GGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAAttgaatacaaaaataaaaaatacaataagcaatatatgaaatgatataaacaaacacaaaacaaatacataaggtaaacagtatagaactttctaccataagcggataggctctttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23678 : aaaaataatacatctggaacacagtaatggactaactgccataagcggctaggatctagctccgtgggcgctggataccgatgatacagaaaaaaaaacgataaacaaatatataaaatgatataaaagcacacaacaaaaataatattgaATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----T----------A---TA-TAGC-------A-----------------TGA----------TA----T-A--A-AAGC--------A-----CACAA---------------CAAAAATAATATTGAACACG---A----------A--A-----------------------AATACAA----------------T-A-AT--A--AT------------------A----------------------CATCT--GGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23679 : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------AA--AT---A----AA---CAAA----T----------A---TA-TAAC-------A-----------------TGA----------TA----T-A--A-AAGC--------A-----C---A---------------CAA---------------CA---A----------A--A-----------------------A----------------------T-A-ATNNN--NN------------------N----------------------NNNNT--GGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23680 : ATAATAGTACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------CA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----C----------A---CA-CAAA-------G-----------------CGG----------TA----T-A--A-AATC--------A-----C---A---------------CAA---------------CA---A----------A--A-----------------------ATATTATTGAACGCGAAATACAAT-A-AT--A--AT------------------A----------------------CATCT--GGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACA-AAA-ATAA
gi|23681 : ATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATA------TA-AAA-ATTCAATT------AAA--TA-------CA--AT---A----AA---CAAA----T----------A---TA-TAAC-------A-----------------TGA----------TA----T-A--A-AAGC--------A-----C---A---------------CAA---------------CA---A----------A--AATAATATCGAATACCAAAATATAA----------------------T-A-AT--A--GT------------------A----------------------CATCT--GGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATAGA-AAA-ATAAAA
gi|23682 : ------------------A----------------------CACAA--GGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23683 : aatAATACACA--AGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTC-TTGCTCCGTGAGCGCTGTTCACCTAGTGATA------TATAAACAT---A--------AAA---A-------CATCAT---ATC--AAACCCAAC----T----------ATT-TA-TAAATAAGT--A------------------GA----------TA----T-A--T-AGGT--------AAT---T---A---------------CAA---------------CA---A----------G--G-----------------------A----------------------C-ACAT--A--AA------------------
gi|23683 : ------------------A----------------------CACAA--GGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTC-TTGCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAAtaaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23684 : aatA------------------A----------------------TACATAAGGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAAacatcatatcaaacccaactatttataaataagtagatatataggtaattacaacaaggacacataaataaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23685 : --GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAAacatcataaattaaacccaactattaaacccaactatttataaataaatagttatataggtaattacatacaaggacacataaataagcgtagtattataaacataaagcaaaatgtatatagaacaaacaaatagtagaatagacagatggacacaacaccagaagctgat
gi|23685 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATA------TATAAACAT---A--------AAA---A-------CATCAT---ATC--AAACCCAAC----T----------ATTTTA-TAAATAAGT--A------------------GA----------TA----T-A--T-AGGT--------AAT---T---A---------------CAA---------------CA---A----------G--G-----------------------A----------------------C-ACAT--A---A------------------A----------------------TAAAT--G-----CAGTATCacatcatatcaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtatcataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23686 : ATA------TA-AAA-AT---AGCAG----AAA--AG-------GA--AC---A----AA---CAAAACAGT----------A---TA-TAAATATGAAAA-----------------TGAAG--------TAAAAAT-A--A-AACC--------AT----C---C---------------CGA---------------CACACA----------ATTG-----------------------A----------------------T-A-AT--A--AT------------------A----------------------CATCT--GGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATATA-AAA-ATAAAAataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23686 : acacaaggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATA------TA-AAA-AT---A--------AAA--
gi|23687 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATA------TA-AAA-AT---AGCAG----AAA--AG-------GA--AC---A----AA---CAAAACAGT----------A---TA-TAAATATGAAAA-----------------TGAAG--------TAAAAAT-A--A-AACC--------AT----C---C---------------CGA---------------CACACA----------ATTG-----------------------A----------------------T-A-AT--A--AT------------------A----------------------CATCT--GGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-ATAAAA
gi|23687 : acacaaggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--
gi|23688 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATA------TA-AAA-AT---AGCAG----AAA--AA-------GA--AC---A----AA---CAAAACAGT----------A---TA-TAAATATGAAAA-----------------TGAAGTAA-----TA----TTA--A-AACC--------AT----C---C---------------CGA---------------CACACA----------ATTG-----------------------A----------------------T-A-AT--A--AT------------------A----------------------CATCT--GGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATATA-AAA-
gi|23688 : aggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATA------TA-AAA-A
gi|23689 : aggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaagaacaaacaaaacagtatataaatatgaaaatgaagtaatattaaaaccatcccgacacacaattgACAA--GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111 33333333 22222222222 1111 111 11111 111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 33 5 111111 5 5 555 22222222 00000000000 99 333 5555 000 44444 888 4 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 22 3 55 22 1 1 9 5 22 1 8 8
lowQualScore : .. . ...... . . ... ........ ........... .. ... .... ... ..... ... . ........................................................................................................................................................................................... .. . .. .. . . . . .. . . .
lowQualScore : 77 0 000000 7 7 555 88888888 88888888888 22 999 6666 888 66666 666 4 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 66 3 77 00 3 8 1 1 00 0 4 4
consensus : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAAATA---CGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------T--AATACACNNGGTAGACAGTANNGAACTAACTGCCATAAGCGGATAGGCTCTTNGCTCCGTGGGCGCTGNNCACCNGATGATATA-AAA-ATAAAA
Reference ( family-842 ) : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAAATA---CGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------T--AANACACNTGGTAGACAGTANNGAACTAACTGCCATAAGCGGATAGGCTCTTNGCTCCGTGGGCGCTGNNCACCNGATGATATA-AAA-ATAAAA
gi|23671 : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACAAAAATA-AAA-AT---ACAATAAACAAA--TATATAAAACG--AT---ATAAAAA---CAAA----TATTCTATTAAATA---CAAAAATAGAAAT-TA----C-AATAAGCAATATATGA--AA---------------CA------------------A----TA---TA------------------------A-----------------------A----------------------C---------A-AACACAAAACC--AATACACAAGGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23672 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATA------CA-AAA-ATA--A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAAA-A---CGA-----------TA----T-AA-AAAC--------A--AA---------------TATTCTATTAAAT-------A----CA---AA------------------------A-----------------------A----------------------T---------A-
gi|23672 : aATA------CA-AAA-AT---AGG------AAT--TA-------CA--AT---A----AG---CAA-----TA---TA-TGAA-A---CAA-----------TA----T-AA-A--------------CA----------------A------------------A----CAC--AA------------------------A-----------------------A----------------------C---------A-A-------------ATACACAAGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTCTT-GCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAAggaattacaataagcaatatatgaaacaatataaacaaacacaaaacaaatacacaaggtaaacagtatagaactaactgccataagcggataggctcttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23673 : aataataatacatctggtagacagtaacgaactaactgccataagcggctaggatctagctctgtgggcgctggataccagatgatacaaaaataaaaatacaataaacaaatatataaaacgatataaaaacaaatattctattaaATAATNNNNNNNNNNTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------CA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----CA---TA-CAAA-G---CGG-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AAAATAATATTGAACATGAAAAATACA-----------------------A----------------------T---------A-A---------T--AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23674 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACAAAAATA-AAA-AT---ACAATAAATAAA--TATATAAAACA--AT---ACAAAAA---CAAA----TATTCTATTAAATA---CAAAAATAGGAAT-TA----C-AATAAGCAATATATGA--AA---------------CA------------------A----TA---TA------------------------A-----------------------A----------------------TAAACACAAAA-A---------A--AATACACAAGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAA
gi|23675 : aATAATAGTACATC--TGGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------GA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----TA---TA-TA-ACA---TGA-----------TAA---T-AA-AA-C--------A--CAAAACAAAAATAATATCA------------------AACACCA---AA------------------------ATACT-------------------A----------------------T---------A-A---------T--AGTACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23676 : aA---AA------------------------A-----------------------A-----------------------------------------------AATACACAAGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAA
gi|23676 : aAAAAATACACA--AGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATA------TATAAACAT---A--------AAA---A-------CATCATGCCA----AACC-CAAC----TATTTTA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------T--AAacatcatgccaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtattataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23677 : aaaAATAATACATC--TGGAACACAGTAATGGACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACC-GATGATA------CA-GAA-A----A--------AAA--AA-------CG--AT---A----AA---CAAA----TA---TA-TAAA-A---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------T--Aataaatgcagtattataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23677 : aaaATA------CA-AAA-AT---A--------AAAAATA-------CA--AT---A----AG---CAA-----TA---TA-TGAA-A---TGA-----------TA----T-AA-ACAA--------A--CA---------------CA------------------A----AA---CA------------------------A-----------------------A----------------------T---------ACA---------T--AA-------GGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAAttgaatacaaaaataaaaaatacaataagcaatatatgaaatgatataaacaaacacaaaacaaatacataaggtaaacagtatagaactttctaccataagcggataggctctttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23678 : aaaaataatacatctggaacacagtaatggactaactgccataagcggctaggatctagctccgtgggcgctggataccgatgatacagaaaaaaaaacgataaacaaatatataaaatgatataaaagcacacaacaaaaataatattgaATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAG-CA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CAACAAAAATAATATTGAACA----CG---AA------------------------A-----------------------AATACAA----------------T---------A-A---------T--AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23679 : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------AA--AT---A----AA---CAAA----TA---TA-T-AACA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------TNNNNNNNNNNTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23680 : ATAATAGTACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------CA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----CA---CA-CAAA-G---CGG-----------TA----T-AA-AATC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------ATATTATTGAACGCGAAATACAAT---------A-A---------T--AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACA-AAA-ATAA
gi|23681 : ATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATA------TA-AAA-ATTCAATT------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAA-CA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------AATAATATCGAATACCAAAATATAA----------------------T---------A-A---------T--AGTACATCTGGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATAGA-AAA-ATAAAA
gi|23682 : --AATACACAAGGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23683 : --AATACACAAGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTCTT-GCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAA
gi|23683 : AATACACA--AGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTC-TTGCTCCGTGAGCGCTGTTCACCTAGTGATA------TATAAACAT---A--------AAA---A-------CATCAT---ATC--AAACCCAAC----TATT-TA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------T--AAacatcatatcaaacccaactatttataaataagtagatatataggtaattacaacaaggacacataaataaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23684 : --AATACATAAGGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAAataaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23685 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAAacatcataaattaaacccaactattaaacccaactatttataaataaatagttatataggtaattacatacaaggacacataaataagcgtagtattataaacataaagcaaaatgtatatagaacaaacaaatagtagaatagacagatggacacaacaccagaagctgat
gi|23685 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATA------TATAAACAT---A--------AAA---A-------CATCAT---ATC--AAACCCAAC----TATTTTA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------T--AAacatcatatcaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtatcataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23686 : ATA------TA-AAA-AT---AGCAG----AAA--AG-------GA--AC---A----AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAG---TAAAAAT-AA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T--AATACATCTGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATCT-AGCTCTGTGGGCGCTGAATACCAGATGATATA-AAA-ATAAAAataaatgcagtatcataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23686 : acacaaggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATA------TA-AAA-AT---A--------AAA--
gi|23687 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATA------TA-AAA-AT---AGCAG----AAA--AG-------GA--AC---A----AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAG---TAAAAAT-AA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T--AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-ATAAAA
gi|23687 : acacaaggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--
gi|23688 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATA------TA-AAA-AT---AGCAG----AAA--AA-------GA--AC---A----AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAGTAATA----TTAA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T--AATACATCTGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGAT-TTAGCTCATTGGGCGCTGGATATCAGATGATATA-AAA-
gi|23688 : aggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATA------TA-AAA-A
gi|23689 : aggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaagaacaaacaaaacagtatataaatatgaaaatgaagtaatattaaaaccatcccgacacacaattgACAAGGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111 33333333 22222222222 1111 111 11111 111 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 33 5 111111 5 5 555 22222222 00000000000 99 333 5555 000 44444 888 4 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 1 222 22 1 1 9 5 22 1 8 8
lowQualScore : .. . ...... . . ... ........ ........... .. ... .... ... ..... ... . ................................................................................................................................................................................................ . ... .. . . . . .. . . .
lowQualScore : 77 0 000000 7 7 555 88888888 88888888888 22 999 6666 888 66666 666 4 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 8 111 00 3 8 1 1 00 0 4 4
consensus : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAAATA---CGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------T----AA-TACATNNGGTAGACAGTANNGAACTAACTGCCATAAGCGGATAGGCTCTTNGCTCCGTGGGCGCTGNNCACCNGATGATATA-AAA-ATAAAA
Reference ( family-842 ) : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAAATA---CGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------T----AA-TACACNNGGTAGACAGTANNGAACTAACTGCCATAAGCGGATAGGCTCTTNGCTCCGTGGGCGCTGNNCACCNGATGATATA-AAA-ATAAAA
gi|23671 : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACAAAAATA-AAA-AT---ACAATAAACAAA--TATATAAAACG--AT---ATAAAAA---CAAA----TATTCTATTAAATA---CAAAAATAGAAAT-TA----C-AATAAGCAATATATGA--AA---------------CA------------------A----TA---TA------------------------A-----------------------A----------------------C---------A-AACACAAAACC----AA-TACACAAGGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23672 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATA------CA-AAA-ATA--A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAAA-A---CGA-----------TA----T-AA-AAAC--------A--AA---------------TATTCTATTAAAT-------A----CA---AA------------------------A-----------------------A----------------------T---------A-G---------G----AATTACA
gi|23672 : aATA------CA-AAA-AT---AGG------AAT--TA-------CA--AT---A----AG---CAA-----TA---TA-TGAA-A---CAA-----------TA----T-AA-A--------------CA----------------A------------------A----CAC--AA------------------------A-----------------------A----------------------C---------A-A---------------A-TACACAAGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTCTT-GCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAAataagcaatatatgaaacaatataaacaaacacaaaacaaatacacaaggtaaacagtatagaactaactgccataagcggataggctcttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23673 : aataataatacatctggtagacagtaacgaactaactgccataagcggctaggatctagctctgtgggcgctggataccagatgatacaaaaataaaaatacaataaacaaatatataaaacgatataaaaacaaatattctattaaATAATNNNNNNNNNNTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------CA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----CA---TA-CAAA-G---CGG-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AAAATAATATTGAACATGAAAAATACA-----------------------A----------------------T---------A-A---------T----AA-TACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23674 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACAAAAATA-AAA-AT---ACAATAAATAAA--TATATAAAACA--AT---ACAAAAA---CAAA----TATTCTATTAAATA---CAAAAATAGGAAT-TA----C-AATAAGCAATATATGA--AA---------------CA------------------A----TA---TA------------------------A-----------------------A----------------------TAAACACAAAA-A---------A----AA-TACACAAGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAA
gi|23675 : aATAATAGTACATC--TGGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------GA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----TA---TA-TA-ACA---TGA-----------TAA---T-AA-AA-C--------A--CAAAACAAAAATAATATCA------------------AACACCA---AA------------------------ATACT-------------------A----------------------T---------A-A---------T----AG-TACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23676 : aA---AA------------------------A-----------------------A-------------------------------------------------AA-TACACAAGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAA
gi|23676 : aAAAAATACACA--AGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATA------TATAAACAT---A--------AAA---A-------CATCATGCCA----AACC-CAAC----TATTTTA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------TA---AA-TAAATGCAGTAacatcatgccaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtattataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23677 : aaaAATAATACATC--TGGAACACAGTAATGGACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACC-GATGATA------CA-GAA-A----A--------AAA--AA-------CG--AT---A----AA---CAAA----TA---TA-TAAA-A---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------TATTGAA-TACAttataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23677 : aaaATA------CA-AAA-AT---A--------AAAAATA-------CA--AT---A----AG---CAA-----TA---TA-TGAA-A---TGA-----------TA----T-AA-A--------------CA----------------A------------------A----CAC--AA------------------------A-----------------------A----------------------C---------A-A---------------A-TACATAAGGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAAaaaataaaaaatacaataagcaatatatgaaatgatataaacaaacacaaaacaaatacataaggtaaacagtatagaactttctaccataagcggataggctctttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23678 : aaaaataatacatctggaacacagtaatggactaactgccataagcggctaggatctagctccgtgggcgctggataccgatgatacagaaaaaaaaacgataaacaaatatataaaatgatataaaagcacacaacaaaaataatattgaATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAG-CA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CAACAAAAATAATATTGAACA----CG---AA------------------------A-----------------------AATACAA----------------T---------A-A---------T----AA-TACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23679 : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------AA--AT---A----AA---CAAA----TA---TA-T-AACA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------TNN--NN-NNNNNNTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23680 : ATAATAGTACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------CA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----CA---CA-CAAA-G---CGG-----------TA----T-AA-AATC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------ATATTATTGAACGCGAAATACAAT---------A-A---------T----AA-TACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACA-AAA-ATAA
gi|23681 : ATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATA------TA-AAA-ATTCAATT------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAA-CA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------AATAATATCGAATACCAAAATATAA----------------------T---------A-A---------T----AG-TACATCTGGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATAGA-AAA-ATAAAA
gi|23682 : ----AA-TACACAAGGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23683 : ----AA-TACACAAGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTCTT-GCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAA
gi|23683 : AATACACA--AGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTC-TTGCTCCGTGAGCGCTGTTCACCTAGTGATA------TATAAACAT---A--------AAA---A-------CATCAT---ATC--AAACCCAAC----TATT-TA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------T----AA-acatcatatcaaacccaactatttataaataagtagatatataggtaattacaacaaggacacataaataaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23684 : ----AA-TACATAAGGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAAataaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23685 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAAacatcataaattaaacccaactattaaacccaactatttataaataaatagttatataggtaattacatacaaggacacataaataagcgtagtattataaacataaagcaaaatgtatatagaacaaacaaatagtagaatagacagatggacacaacaccagaagctgat
gi|23685 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATA------TATAAACAT---A--------AAA---A-------CATCAT---ATC--AAACCCAAC----TATTTTA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------TA---AA-TAAATGCAGTAacatcatatcaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtatcataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23686 : ATA------TA-AAA-AT---AGCAG----AAA--AG-------GA--AC---A----AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAG---TAAAAAT-AA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T----AA-TACATCTGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATCT-AGCTCTGTGGGCGCTGAATACCAGATGATATA-AAA-ATAAAAtcataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23686 : acacaaggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATA------TA-AAA-AT---A--------AAA--
gi|23687 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATA------TA-AAA-AT---AGCAG----AAA--AG-------GA--AC---A----AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAG---TAAAAAT-AA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T----AA-TACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-ATAAAA
gi|23687 : acacaaggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--
gi|23688 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATA------TA-AAA-AT---AGCAG----AAA--AA-------GA--AC---A----AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAGTAATA----TTAA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T----AA-TACATCTGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGAT-TTAGCTCATTGGGCGCTGGATATCAGATGATATA-AAA-
gi|23688 : aggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATA------TA-AAA-A
gi|23689 : aggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaagaacaaacaaaacagtatataaatatgaaaatgaagtaatattaaaaccatcccgacacacaattgACAAGGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111 444444444444444444444444444444444444 111 1111 222 5555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555
lowQualScore : 33 5 777777 6 6 333 333333333333333333333333333333333333 111 5555 333 7 6 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 22 22 1 1 9 5 22 1 8 8
lowQualScore : .. . ...... . . ... .................................... ... .... ... . . .............................................................................................................................................................................................. .. .. . . . . .. . . .
lowQualScore : 77 0 222222 0 0 777 444444444444444444444444444444444444 555 0000 888 1 1 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 00 00 3 8 1 1 00 0 4 4
consensus : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAAATA---CGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------T----AATACATNNGGTAGACAGTANNGAACTAACTGCCATAAGCGGATAGGCTCTTNGCTCCGTGGGCGCTGNNCACCNGATGATATA-AAA-ATAAAA
Reference ( family-842 ) : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAAATA---CGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------T----AATACATNNGGTAGACAGTANNGAACTAACTGCCATAAGCGGATAGGCTCTTNGCTCCGTGGGCGCTGNNCACCNGATGATATA-AAA-ATAAAA
gi|23671 : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACAAAAATA-AAA-AT---ACAATAAACAAA--TATATAAAACG--AT---ATAAAAA---CAAA----TATTCTATTAAATA---CAAAAATAGAAAT-TA----C-AATAAGCAATATATGA--AA---------------CA------------------A----TA---TA------------------------A-----------------------A----------------------C---------A-AACACAAAACC----AATACACAAGGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23672 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATACAAAAATA-AAA-AT---ACAATAAACAAA--TATATAAAACG--AT---ATAAAAA---CAAA----TATTCTATTAAATA---CAAAAATAGGAAT-TA----C-AATAAGCAATATATGA--AA---------------CA------------------A----TA---TA------------------------A-----------------------A----------------------C---------A-AACACAAAACA----AATACACAAGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTCTT-GCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23673 : aATAATNNNNNNNNNNTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------CA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----CA---TA-CAAA-G---CGG-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AAAATAATATTGAACATGAAAAATACA-----------------------A----------------------T---------A-A---------T----AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23674 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACAAAAATA-AAA-AT---ACAATAAATAAA--TATATAAAACA--AT---ACAAAAA---CAAA----TATTCTATTAAATA---CAAAAATAGGAAT-TA----C-AATAAGCAATATATGA--AA---------------CA------------------A----TA---TA------------------------A-----------------------A----------------------TAAACACAAAA-A---------A----AATACACAAGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAA
gi|23675 : aATAATAGTACATC--TGGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------GA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----TA---TA-TA-ACA---TGA-----------TAA---T-AA-AA-C--------A--CAAAACAAAAATAATATCA------------------AACACCA---AA------------------------ATACT-------------------A----------------------T---------A-A---------T----AGTACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23676 : aA---AA------------------------A-----------------------A-------------------------------------------------AATACACAAGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAA
gi|23676 : aAAAAATACACA--AGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATA------TATAAACAT---A--------AAA---A-------CATCATGCCA----AACC-CAAC----TATTTTA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------TA---AATAAATGCAGTAacatcatgccaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtattataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23677 : aaaAATAATACATC--TGGAACACAGTAATGGACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACC-GATGATA------CA-GAA-A----A--------AAA--AA-------CG--AT---A----AA---CAAA----TA---TA-TAAA-A---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------TATTGAATACAttataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23677 : aaaATA------CA-AAA-AT---A--------AAAAATA-------CA--AT---A----AG---CAA-----TA---TA-TGAA-A---TGA-----------TA----T-AA-A--------------CA----------------A------------------A----CAC--AA------------------------A-----------------------A----------------------C---------A-A---------------ATACATAAGGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAAaaaataaaaaatacaataagcaatatatgaaatgatataaacaaacacaaaacaaatacataaggtaaacagtatagaactttctaccataagcggataggctctttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23678 : aaaaataatacatctggaacacagtaatggactaactgccataagcggctaggatctagctccgtgggcgctggataccgatgatacagaaaaaaaaacgataaacaaatatataaaatgatataaaagcacacaacaaaaataatattgaATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAG-CA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CAACAAAAATAATATTGAACA----CG---AA------------------------A-----------------------AATACAA----------------T---------A-A---------T----AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23679 : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------AA--AT---A----AA---CAAA----TA---TA-T-AACA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------TNN--NNNNNNNNTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23680 : ATAATAGTACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------CA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----CA---CA-CAAA-G---CGG-----------TA----T-AA-AATC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------ATATTATTGAACGCGAAATACAAT---------A-A---------T----AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACA-AAA-ATAA
gi|23681 : ATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATA------TA-AAA-ATTCAATT------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAA-CA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------AATAATATCGAATACCAAAATATAA----------------------T---------A-A---------T----AGTACATCTGGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATAGA-AAA-ATAAAA
gi|23682 : ----AATACACAAGGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23683 : ----AATACACAAGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTCTT-GCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAA
gi|23683 : AATACACA--AGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTC-TTGCTCCGTGAGCGCTGTTCACCTAGTGATA------TATAAACAT---A--------AAA---A-------CATCAT---ATC--AAACCCAAC----TATT-TA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------T----AAacatcatatcaaacccaactatttataaataagtagatatataggtaattacaacaaggacacataaataaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23684 : ----AATACATAAGGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAAataaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23685 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAAacatcataaattaaacccaactattaaacccaactatttataaataaatagttatataggtaattacatacaaggacacataaataagcgtagtattataaacataaagcaaaatgtatatagaacaaacaaatagtagaatagacagatggacacaacaccagaagctgat
gi|23685 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATA------TATAAACAT---A--------AAA---A-------CATCAT---ATC--AAACCCAAC----TATTTTA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------TA---AATAAATGCAGTAacatcatatcaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtatcataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23686 : ATA------TA-AAA-AT---AGCAG----AAA--AG-------GA--AC---A----AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAG---TAAAAAT-AA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T----AATACATCTGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATCT-AGCTCTGTGGGCGCTGAATACCAGATGATATA-AAA-ATAAAAtcataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23686 : acacaaggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATA------TA-AAA-AT---A--------AAA--
gi|23687 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATA------TA-AAA-AT---AGCAG----AAA--AG-------GA--AC---A----AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAG---TAAAAAT-AA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T----AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-ATAAAA
gi|23687 : acacaaggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--
gi|23688 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATA------TA-AAA-AT---AGCAG----AAA--AA-------GA--AC---A----AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAGTAATA----TTAA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T----AATACATCTGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGAT-TTAGCTCATTGGGCGCTGGATATCAGATGATATA-AAA-
gi|23688 : aggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATA------TA-AAA-A
gi|23689 : aggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaagaacaaacaaaacagtatataaatatgaaaatgaagtaatattaaaaccatcccgacacacaattgACAAGGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111 444444444444444444444444444444444444 111 1111 222 5555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555
lowQualScore : 33 5 777777 6 6 333 333333333333333333333333333333333333 111 5555 333 7 6 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 22 22 1 1 9 5 22 1 8 8
lowQualScore : .. . ...... . . ... .................................... ... .... ... . . .............................................................................................................................................................................................. .. .. . . . . .. . . .
lowQualScore : 77 0 222222 0 0 777 444444444444444444444444444444444444 555 0000 888 1 1 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 00 00 3 8 1 1 00 0 4 4
consensus : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAAATA---CGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------T----AATACATNNGGTAGACAGTANNGAACTAACTGCCATAAGCGGATAGGCTCTTNGCTCCGTGGGCGCTGNNCACCNGATGATATA-AAA-ATAAAA
Reference ( family-842 ) : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAAATA---CGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------T----AATACATNNGGTAGACAGTANNGAACTAACTGCCATAAGCGGATAGGCTCTTNGCTCCGTGGGCGCTGNNCACCNGATGATATA-AAA-ATAAAA
gi|23671 : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACAAAAATA-AAA-AT---ACAATAAACAAA--TATATAAAACG--AT---ATAAAAA---CAAA----TATTCTATTAAATA---CAAAAATAGAAAT-TA----C-AATAAGCAATATATGA--AA---------------CA------------------A----TA---TA------------------------A-----------------------A----------------------C---------A-AACACAAAACC----AATACACAAGGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23672 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATACAAAAATA-AAA-AT---ACAATAAACAAA--TATATAAAACG--AT---ATAAAAA---CAAA----TATTCTATTAAATA---CAAAAATAGGAAT-TA----C-AATAAGCAATATATGA--AA---------------CA------------------A----TA---TA------------------------A-----------------------A----------------------C---------A-AACACAAAACA----AATACACAAGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTCTT-GCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23673 : aATAATNNNNNNNNNNTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------CA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----CA---TA-CAAA-G---CGG-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AAAATAATATTGAACATGAAAAATACA-----------------------A----------------------T---------A-A---------T----AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23674 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACAAAAATA-AAA-AT---ACAATAAATAAA--TATATAAAACA--AT---ACAAAAA---CAAA----TATTCTATTAAATA---CAAAAATAGGAAT-TA----C-AATAAGCAATATATGA--AA---------------CA------------------A----TA---TA------------------------A-----------------------A----------------------TAAACACAAAA-A---------A----AATACACAAGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAA
gi|23675 : aATAATAGTACATC--TGGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------GA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----TA---TA-TA-ACA---TGA-----------TAA---T-AA-AA-C--------A--CAAAACAAAAATAATATCA------------------AACACCA---AA------------------------ATACT-------------------A----------------------T---------A-A---------T----AGTACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23676 : aA---AA------------------------A-----------------------A-------------------------------------------------AATACACAAGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAA
gi|23676 : aAAAAATACACA--AGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATA------TATAAACAT---A--------AAA---A-------CATCATGCCA----AACC-CAAC----TATTTTA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------TA---AATAAATGCAGTAacatcatgccaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtattataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23677 : aaaAATAATACATC--TGGAACACAGTAATGGACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACC-GATGATA------CA-GAA-A----A--------AAA--AA-------CG--AT---A----AA---CAAA----TA---TA-TAAA-A---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------TATTGAATACAttataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23677 : aaaATA------CA-AAA-AT---A--------AAAAATA-------CA--AT---A----AG---CAA-----TA---TA-TGAA-A---TGA-----------TA----T-AA-A--------------CA----------------A------------------A----CAC--AA------------------------A-----------------------A----------------------C---------A-A---------------ATACATAAGGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAAaaaataaaaaatacaataagcaatatatgaaatgatataaacaaacacaaaacaaatacataaggtaaacagtatagaactttctaccataagcggataggctctttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23678 : aaaaataatacatctggaacacagtaatggactaactgccataagcggctaggatctagctccgtgggcgctggataccgatgatacagaaaaaaaaacgataaacaaatatataaaatgatataaaagcacacaacaaaaataatattgaATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAG-CA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CAACAAAAATAATATTGAACA----CG---AA------------------------A-----------------------AATACAA----------------T---------A-A---------T----AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23679 : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------AA--AT---A----AA---CAAA----TA---TA-T-AACA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------TNN--NNNNNNNNTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23680 : ATAATAGTACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------CA-AAA-AT---A--------AAAA-TA-------CA--AT---A----AA---CAAA----CA---CA-CAAA-G---CGG-----------TA----T-AA-AATC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------ATATTATTGAACGCGAAATACAAT---------A-A---------T----AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACA-AAA-ATAA
gi|23681 : ATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATA------TA-AAA-ATTCAATT------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAA-CA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------AATAATATCGAATACCAAAATATAA----------------------T---------A-A---------T----AGTACATCTGGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATAGA-AAA-ATAAAA
gi|23682 : ----AATACACAAGGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23683 : ----AATACACAAGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTCTT-GCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAA
gi|23683 : AATACACA--AGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTC-TTGCTCCGTGAGCGCTGTTCACCTAGTGATA------TATAAACAT---A--------AAA---A-------CATCAT---ATC--AAACCCAAC----TATT-TA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------T----AAacatcatatcaaacccaactatttataaataagtagatatataggtaattacaacaaggacacataaataaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23684 : ----AATACATAAGGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAAataaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23685 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAAacatcataaattaaacccaactattaaacccaactatttataaataaatagttatataggtaattacatacaaggacacataaataagcgtagtattataaacataaagcaaaatgtatatagaacaaacaaatagtagaatagacagatggacacaacaccagaagctgat
gi|23685 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATA------TATAAACAT---A--------AAA---A-------CATCAT---ATC--AAACCCAAC----TATTTTA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------TA---AATAAATGCAGTAacatcatatcaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtatcataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23686 : ATA------TA-AAA-AT---AGCAG----AAA--AG-------GA--AC---A----AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAG---TAAAAAT-AA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T----AATACATCTGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATCT-AGCTCTGTGGGCGCTGAATACCAGATGATATA-AAA-ATAAAAtcataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23686 : acacaaggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATA------TA-AAA-AT---A--------AAA--
gi|23687 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATA------TA-AAA-AT---AGCAG----AAA--AG-------GA--AC---A----AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAG---TAAAAAT-AA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T----AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-ATAAAA
gi|23687 : acacaaggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--
gi|23688 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATA------TA-AAA-AT---AGCAG----AAA--AA-------GA--AC---A----AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAGTAATA----TTAA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T----AATACATCTGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGAT-TTAGCTCATTGGGCGCTGGATATCAGATGATATA-AAA-
gi|23688 : aggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATA------TA-AAA-A
gi|23689 : aggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaagaacaaacaaaacagtatataaatatgaaaatgaagtaatattaaaaccatcccgacacacaattgACAAGGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAA
blockSeqs : NN T CAAAAA T C TCA CAATAAACAAATATATAAAACGATATAAA ACC ACAG TTC T T CAAAAATAGGAATTACAATAAGCAATATATGAAACAATATAAACAAACACAAAACA AA TA A C T A TT T T C
blockSeqs : . T CAAAAA T C . CAATAAATAAATATATAAAACAATACAAA ACC ACAG TTC T T CAAAAATAGGAATTACAATAAGCAATATATGAAACAATATAAATAAACACAAAAAA CT AC A A T T GA A T C
blockSeqs : . . . T C . AAAACATCATGCCA CC ACAG TTT . C CGGTATAAAAGCACACAACAAAAATAATATTGAACATGAAAAATACAATAAT AA TA A C T A CT T T C
blockSeqs : . . . . . . GCAGAAAAGGAACA . . TTT . T TGATATAAAAGCACACAACAAAAATAATATTGAACACGAAAAATACAATAAT CT AC A A T T GA A T C
blockSeqs : . . . . . . GCAGAAAAGGAACA . . TT . C TGATAATAAAACACAAAACAAAAATAATATCAAACACCAAAATACTATAAT AA TA A C T T CT T . .
blockSeqs : . . . . . . GCAGAAAAAGAACA . . . . C TGATATAAAAGCACACAACAAAAATAATATCGAATACCAAAATATAATAAT GC TA A C T A TT T . .
blockSeqs : . . . . . . AAAACATCATATC . . . . C CGGTATAAAATCACACAACAAAAATATTATTGAACGCGAAATACAATAAT AA AC A A T A GA A . .
blockSeqs : . . . . . . AAAACATCATATC . . . . T TGAAAATGAAGTAAAAATAAAACCATCCCGACACACAATTGATAAT CT AC A A T A GA A . .
blockSeqs : . . . . . . AAAAATACAATA . . . . T TGAAAATGAAGTAAAAATAAAACCATCCCGACACACAATTGATAAT NT AC A A T A GA A . .
blockSeqs : . . . . . . TTAAATACAATA . . . . T TGAAAATGAAGTAATATTAAAACCATCCCGACACACAATTGATAAT CT AC A A T T GA A . .
blockSeqs : . . . . . . AAAATACAATA . . . . T AGTAGATATATAGGTAATTACAACAAGGACACATA CT TA A C T T TT T . .
blockSeqs : . . . . . . AAAATACAATA . . . . T AGTAGATATATAGGTAATTACAACAAGGACACATA AA TA A C . T TT T . .
blockSeqs : . . . . . . AAAATACAATA . . . . . AGTAGATATATAGGTAATTACAACAAGGACACAT AA TA A C . A TT T . .
blockSeqs : . . . . . . AAAAACGATA . . . . . TGATATAAAAGCACACAACAAAAATAATATTG AA TA A C . A CT T . .
blockSeqs : . . . . . AAATACAATA . . . . . TGATATAAAAGCACACAACAAAAATAATNN GC AC . A . A AA A . .
blockSeqs : . . . . AAATAAAATA . . . . . TGATATAAACAAACACAAAACAA CT AC . A . T GA A . .
blockSeqs : . . . . CT AC . A . . GA A . .
blockSeqs : . . . . CT TA . C . . CT T . .
blockSeqs : . . . AA
blockSeqCons : ****** AAAATACAATA************************* ***
originalCons : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---A--------AAA--TA-------CA--AT---A----AA---CAAA----TA---TA-TAAATA---CGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------T----AATACATNNGGTAGACAGTANNGAACTAACTGCCATAAGCGGATAGGCTCTTNGCTCCGTGGGCGCTGNNCACCNGATGATATA-AAA-ATAAAA
finalCons : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATA------TA-AAA-AT---AAAAATACAATA-------------------------AA---CAAA----TA---TA-TAAATA---CGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------T----AATACATNNGGTAGACAGTANNGAACTAACTGCCATAAGCGGATAGGCTCTTNGCTCCGTGGGCGCTGNNCACCNGATGATATA-AAA-ATAAAA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 5555555555555555555555555555555 111 1111 222 5555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555
lowQualScore : 33 5 6 6 9999999999999999999999999999999 22 88 44 3 6666 66 111 5555 333 7 6 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 22 22 1 1 9 5 22 1 8 8
lowQualScore : .. . . . ............................... .. .. .. . .... .. ... .... ... . . .............................................................................................................................................................................................. .. .. . . . . .. . . .
lowQualScore : 77 0 0 0 0000000000000000000000000000000 99 77 66 5 4444 55 555 0000 888 1 1 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 00 00 3 8 1 1 00 0 4 4
consensus : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-A-----------------------T--A----A--AA--A-TACAAT---A--AA---CAAA----TA---TA-TAAATA---CGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------T----AATACATNNGGTAGACAGTANNGAACTAACTGCCATAAGCGGATAGGCTCTTNGCTCCGTGGGCGCTGNNCACCNGATGATATA-AAA-ATAAAA
Reference ( family-842 ) : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-A-----------------------T--A----A--AA--A-TACAAT---A--AA---CAAA----TA---TA-TAAATA---CGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------T----AATACATNNGGTAGACAGTANNGAACTAACTGCCATAAGCGGATAGGCTCTTNGCTCCGTGGGCGCTGNNCACCNGATGATATA-AAA-ATAAAA
gi|23671 : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACA-AAA-ATAAAAATACAATAAACAAATATAT--A----A--AACGA-TATAA----A--AA---CAAA----TATTCTATTAAATA---CAAAAATAGAAAT-TA----C-AATAAGCAATATATGA--AA---------------CA------------------A----TA---TA------------------------A-----------------------A----------------------C---------A-AACACAAAACC----AATACACAAGGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23672 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAAATACAATAAACAAATATAT--A----A--AACGA-TATAA----A--AA---CAAA----TATTCTATTAAATA---CAAAAATAGGAAT-TA----C-AATAAGCAATATATGA--AA---------------CA------------------A----TA---TA------------------------A-----------------------A----------------------C---------A-AACACAAAACA----AATACACAAGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTCTT-GCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23673 : aATAATNNNNNNNNNNTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-A-----------------------T--A----A--AA--A-TACAAT---A--AA---CAAA----CA---TA-CAAA-G---CGG-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AAAATAATATTGAACATGAAAAATACA-----------------------A----------------------T---------A-A---------T----AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23674 : aATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACA-AAA-ATAAAAATACAATAAATAAATATAT--A----A--AACAA-TACAA----A--AA---CAAA----TATTCTATTAAATA---CAAAAATAGGAAT-TA----C-AATAAGCAATATATGA--AA---------------CA------------------A----TA---TA------------------------A-----------------------A----------------------TAAACACAAAA-A---------A----AATACACAAGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAA
gi|23675 : aATAATAGTACATC--TGGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATAGA-AAA-A-----------------------T--A----A--AA--A-TACAAT---A--AA---CAAA----TA---TA-TAA-CA---TGA-----------TAA---T-AA-AA-C--------A--CAAAACAAAAATAATATCA------------------AACACCA---AA------------------------ATACT-------------------A----------------------T---------A-A---------T----AGTACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23676 : aA---AA------------------------A-----------------------A-------------------------------------------------AATACACAAGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAA
gi|23676 : aAAAAATACACA--AGGTAAACAGTATAGAACTAACTGCC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACA-----------------------T--A----A--AA--A-CATCATGCCA--AACC-CAAC----TATTTTA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------TA---AATAAATGCAGTAacatcatgccaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtattataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23677 : aaaAATAATACATC--TGGAACACAGTAATGGACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACC-GATGATACA-GAA-A--------------------------A----A--AA--A--ACGAT---A--AA---CAAA----TA---TA-TAAA-A---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------TATTGAATACAttataaacatagagtaaaatgtaaatagagaaaacaactagtagaa
gi|23677 : aaaATACA-AAA-A-----------------------T--A----A--AA--AATACAAT---A--AG---CAA-----TA---TA-TGAA-A---TGA-----------TA----T-AA-A--------------CA----------------A------------------A----CAC--AA------------------------A-----------------------A----------------------C---------A-A---------------ATACATAAGGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAAaaaataaaaaatacaataagcaatatatgaaatgatataaacaaacacaaaacaaatacataaggtaaacagtatagaactttctaccataagcggataggctctttgctccgtgagcgctgttcacctagtgatatataaacataa
gi|23678 : aaaaataatacatctggaacacagtaatggactaactgccataagcggctaggatctagctccgtgggcgctggataccgatgatacagaaaaaaaaacgataaacaaatatataaaatgatataaaagcacacaacaaaaataatattgaATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATATA-AAA-A-----------------------T--A----A--AA----TACAAT---A--AA---CAAA----TA---TA-TAG-CA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CAACAAAAATAATATTGAACA----CG---AA------------------------A-----------------------AATACAA----------------T---------A-A---------T----AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGTGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23679 : ATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-A-----------------------T-------A--AA--A-TAAAAT---A--AA---CAAA----TA---TA-T-AACA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------A----------------------T---------A-A---------TNN--NNNNNNNNTGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-ATAAAA
gi|23680 : ATAATAGTACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATACA-AAA-A-----------------------T--A----A--AA--A-TACAAT---A--AA---CAAA----CA---CA-CAAA-G---CGG-----------TA----T-AA-AATC--------A--CA---------------CA------------------A----CA---AA------------------------A-----------------------ATATTATTGAACGCGAAATACAAT---------A-A---------T----AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGGATACCAGTTTATACA-AAA-ATAA
gi|23681 : ATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATATA-AAA-A-----------------------TTCA----ATTAA--A-TACAAT---A--AA---CAAA----TA---TA-TAA-CA---TGA-----------TA----T-AA-AAGC--------A--CA---------------CA------------------A----CA---AA------------------------AATAATATCGAATACCAAAATATAA----------------------T---------A-A---------T----AGTACATCTGGTAGAAAGTAACGAACTAACTGCCATAAGCAGATAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATAGA-AAA-ATAAAA
gi|23682 : ----AATACACAAGGTAAACAGTATAGCACTTACTGCCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATA-TAA-ACATAA
gi|23683 : ----AATACACAAGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTCTT-GCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAA
gi|23683 : AATACACA--AGGTAAACAGTATAGAACTAACTGCCATAAGCGGATAGGCTC-TTGCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACA-----------------------T--A----A--AA--A-CATCAT---ATCAAACCCAAC----TATT-TA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------T----AAacatcatatcaaacccaactatttataaataagtagatatataggtaattacaacaaggacacataaataaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23684 : ----AATACATAAGGTAAACAGTATAGAACTTTCTACCATAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGTTCACCTAGTGATATATAAACATAAAAataaaagcagtattataaacatagagtaaaatgtatatagagcaaacaaatagtagaa
gi|23685 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACATAAAAacatcataaattaaacccaactattaaacccaactatttataaataaatagttatataggtaattacatacaaggacacataaataagcgtagtattataaacataaagcaaaatgtatatagaacaaacaaatagtagaatagacagatggacacaacaccagaagctgat
gi|23685 : GGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATATAAACA-----------------------T--A----A--AA--A-CATCAT---ATCAAACCCAAC----TATTTTA-TAAATAAGTAGA-----------TA----T-AT-AGGT--------AATTA---------------CA------------------A----CA---AG------------------------G-----------------------A----------------------C---------ACA---------TA---AATAAATGCAGTAacatcatatcaaacccaactattttataaataagtagatatataggtaattacaacaaggacacataaataaatgcagtatcataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23686 : ATATA-AAA-A-----------------------T--AGCAGA--AA--A-GG-AAC---A--AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAG---TAAAAAT-AA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T----AATACATCTGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATCT-AGCTCTGTGGGCGCTGAATACCAGATGATATA-AAA-ATAAAAtcataaacatagagtaaaatgtatatagaagaaacaactagtagaa
gi|23686 : acacaaggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAGACAGTAACGAA-TAACTGCCATAAGCGGCTAGGATC-TAGCTCTGTGGGCGCTGAATACCAGATGATATA-AAA-A-----------------------T--A----A--AA--
gi|23687 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATATA-AAA-A-----------------------T--AGCAGA--AA--A-GG-AAC---A--AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAG---TAAAAAT-AA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T----AATACATCTGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-ATAAAA
gi|23687 : acacaaggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAGACAGTAACGAACTAACTGCCATAAGCGGCTAGGATC-TAGCTCCGTGGGCGCTGGATACCAGATGATATA-AAA-A-----------------------T--A----A--AA--
gi|23688 : acacaaggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaggaacaaacaaaacagtatataaatatgaaaatgaagtaaaaataaaaccatcccgacacacaattgATATA-AAA-A-----------------------T--AGCAGA--AA--A--AGAAC---A--AA---CAAAACAGTA---TA-TAAATA---TGAAAATGAAGTAATA----TTAA-AACC--------AT-CC---------------CG------------------A----CACACAATT----------------------G-----------------------A----------------------T---------A-A---------T----AATACATCTGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGAT-TTAGCTCATTGGGCGCTGGATATCAGATGATATA-AAA-
gi|23688 : aggtgatataaaatcaaaaatataataaacaatATAATAATACATC--TGGTAAACAGTAACGAACTAACTGCCATAAGCGGCTAGGATT-TAGCTCATTGGGCGCTGGATATCAGATGATATA-AAA-A-----------------------
gi|23689 : aggtgatataaaatcaaaaatataataaacaatatataaaaatagcagaaaaagaacaaacaaaacagtatataaatatgaaaatgaagtaatattaaaaccatcccgacacacaattgACAAGGTAAACAGTATAGAACTAACTACC-TAAGCGGATAGGCTCTTTGCTCCGTGAGCGCTGCTCACCTAATGATATA-TAA-ACATAA