lowQualScore : 44444444444 1111111111 222 1111 1 1111
lowQualScore : 6 77777 5 6666 2 3 6 1 1 33333333333 5 1 1 22 0 3333333333 2 222 22 88 00 11 888 1 11 222 2 4444 1111 2 6 2 2 2 4 3 1 33 0 33 1111 444 5555
lowQualScore : . ..... . .... . . . . . ........... . . . .. . .......... . ... .. .. .. .. ... . .. ... . .... .... . . . . . . . . .. . .. .... ... ....
lowQualScore : 2 77777 5 5555 6 9 0 7 7 00000000000 5 7 7 44 8 0000000000 1 777 11 77 44 88 222 6 44 888 1 5555 1111 2 4 0 2 2 7 8 1 22 1 44 2222 444 3333
consensus : AAACAAACT-GC-----ACAAT----TTCATTGCATGTATTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-G-----------ACTG-T-G--ACGTCACCGTG----CGTCGGCTAA---CATCAAA--GGGATATTGTA-CGGGTGAAACGTACATGATTTCA---AGT-CCT----TGAAAGTG----ACATGTTTATGTC-GTTTCTTTT-TG-AAAATTGAAGCA-TGTTNTCGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
Reference ( gi|120064 ) : AAACAAACT-GC-----ACAGT----TTCATTGCATGTACTAAACGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-G-----------ACGG-T-G--ACGTCACCGTG----CATCGGCTAA---CATCAAA--GAGATGTTGTA-CGGCCGAAACGTACATGATTTCA---AGT-CCT----TGAAAGTG----ACATGTTTATGTC-GTGTCTTTT-TG-AAAATTGAAGCA-TGTTTTTGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120063 : AAACAAACT-GC-----ACACT----TTCATTGCATGTACTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-G-----------ACTG-T-G--ACGTCACCGTG----CGTCGGCTAA---CATCAAA--GAGATATTGTA-CGGGCGAAACGTACATGATT--------T-CCT----TGAAAATG----ACATGTTTATGTC-GTTTCTTTT-TG-AAAATTGAAGCA-TGTTTTTGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120068 : AAACAAACT-GC-----ACAAT----TTCATTGCATGTATTGAATGAAACAACATGTTTGCTGTCGTCTCTTT-GAT-A-----------ACTG-T-G--ACGTCACTGTG----CATCGGTGGA---CATCAAA--GAGATATTGTA-CTGGTGAAATGTATATGATTTCA---AGC-CCT----TGAAAGTG----ACATGTTTATGTT-GTTTTTTTT-TG-AAAATTGAAGCA-TGTTTTTGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120067 : AAACAAACT-GC-----ACAAT----TTCATTGCATGTGTTAAATGAAACAACACGTTTACTGTCATCTCTTT-GAT-G-----------ACTG-T-G--AAGTCACCGTG----CGTCGTCTAA---CATCAAA--GTGATATTGTA-AGGGTGAAACGTACATGATTTCA---AGT-CCT----TGAAAGTG----ACATGTTTATGTC-GTTTCATTT-TG-AAAATTGAAGCA-TGTTTTTGGATTGCGAAG--T---------------TATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120065 : AAACGAACT-GC-----ACAAT----TTCATTGCATATATTGAATGAAACAACACGTTTGCTGTCGTCTCTTC-GAT-G-----------ACTG-T-G--ACGTCACCCTG----CGTCGGCTAA---CATTAAA--GGGATATTGTA-AGGGTGAAACGTACATGATTTCA---AGT-CCT----TGAAAGTG----ATTTGTTTATGTC-GTTTCGTTT-TG-AAAGTTGAAGCA-TGTTTTTGGATGGCGAAG--TTAG--T----T---ATATGGAAGAAA----TATATCAAATTAATGGATAA
gi|120066 : AAACAAACT-GC-----ACTAT----TTCATTGCATGTATTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-G-----------ACTG-T-G--ACGTCAGCGTG----CGTCGGCTAA---CATCAAA--GAGATATTGTA-TGGGTCAAATGTACATGATTTCA---AGT-TCT----CGAAAGTG----ACATGTTTATATC-GTTTCTTTT-TG-ATAACTGTAGCA-TGTTTTTGGATCGCAAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAATTTAATGGATAA
gi|120069 : AAACAAACT-GC-----ACAAT----TTCATTGCATGTTTTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-G-----------ACTG-T-G--ACATCACGGTA----CGTCGGCTAA---CATCAAA--GGGATATTGTA-AGGGTGAAATGTACATGATTTCA---AGT-CCT----TGAAAATG----ACATGTTTATTTCAGT-TTTTTT-TT-AAAACTGAAGCA-TGTTGTTGGATTGGGAAG--TTAG--T----A---ACATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120070 : AAACAAACT-GC-----ATAAT----TCCATTGCATGTATTGAATGAAATAACACGTTTGCTGTTGTCTCTTT-GAT-G-----------ATTT-T-G--ACATCACCATG----CGTCAGCTAA---CATCAAA--GGGATATTGTA-AAGGTGAAACATACATGATTTCA---AGT-CCT----TGAAAGTG----ACATGTTTATGTC-ATTTC-TTT-TG-AAAATTGAAGCA-TGTTGTTGGATTACGA------AG--T----A---ATATGGAGGAAA----TATATCAATTTAATAGATAA
gi|120072 : AAACAAACT-GC-----GCAAT----TTCATTGCATGTATTGAATGAAACAACACGTTGGCTGTCGTCTCTTT-GAA-G-----------ACTG-T-G--ACGTCACCTTG----CATCAGCTAA---CATCAAA--GGGATATTGTA-TGG-------GTG-ATAAT---A---AGT-CTT----TGAAAGTG----ACATGTTTATGTC-ATTTCTTTT-TG-GAAATTGAAGCA-TGTTTTTGGATTGCAAAG--TTAG--T----A---ATATGG-GAAAA----TATATCAAATTATTGGATAA
gi|120071 : AAAAAAACT-GC-----ACAAT----TCCATTGCATGTATTGAATGAAATAAAACATTTGCTGTCGTTTCTTT-GAT-G-----------ACTG-T-G--ACATCACTGTG----TGTCGGCTAA---CATCAAA--GGGATTTTATA-AGGGTTAAACATACATGATTTCA---AGT-CCT----CATAAGTG----ACATGTTTATGTC-GTTTCTTTT-TT-AAAATTGAAGCA-TGTTGCTGGATTGCGAAG--TTAG--T----A---ATATTGAGGAAA----TATATCA
gi|120074 : AAACAGACTAGCCAATAGCAGTATTATTC-TTGC-TGTACTGAATGAAATAACACGTTTGCTGTCGTCTCTTG-GAT-G-----------ACTG-T-G--ACGTCACCGTG----CGTTGGCTAA---CATCAAA--GAGATATTGTA-CACGTGAAACGTACATAATTTgt
gi|120075 : AAAAAAAT-GT-----ACTAT----TTCATCGTATGTATTGAATGGAACAAGACGCTT---------TTTTA-AAT-G------------CGG-T-GTGACGTAACCACG----CGTTGGCGAG---TATCAAAGAGAGATATTGCA-TAG-CGAACTGAGCATAG----A---AGT-CTT----TGAAAATG----ACATCCTTACGTC-ATTTCTTTC-AA-AAAAGTAAA
gi|120076 : ACAAACT-GC-----ATAAT----TTCATTGCATGTATTAAATGAAACAACACATTTGCTGTCATCTCTTT-GAT-G-----------ACTG-T-G--ATGTCACCGTG----CTTTGGCTAA---TATCAAA--GAGATATTGTA-CGGGTGAAACGTACATGATTTCA---AGT-CAA----TGAAAGTG----ACATGTTTATGTC-ATTTCTTTT-TG-AAAATTGAAGCA-TGTTTTTGGATTGCAAAG--ATAGTTT----A---ATATGGAGGAAA----TAT-----ATTAATTGATAA
gi|120077 : ACAAATTTGC-----ACAAT----TTCATTGCATGTATTGAATGAAACAACACATTTGTTTTCGTCTCTTT-GAT-G-----------ACTG-T-G--ACGTCACCATG----CATCGGCTAA---CATCAAA--GGGATATTGTA-AGGGTGAAACATACATGATTTCA---AGT-TCT----TGAAAGTG----GCATGTTTATGTC-GCTTCATTT-TG-AAAATTGAAGCA-TGTTGTTGGATTGCTTTG--TTAG--T----ATTCATATGGAGGAA------ATATCAAGTTAATGGATAAtatata
gi|120073 : TGCACTGAATTAAACAATACGTTGGCTGTTGTCTCTTT-GAA-G-----------ACTG-T-G--ACGTCACTGTG----CGTCAGCTAA---CATCAGA--GGGATATTGCAACGGT-GAAACGTACATCATTTCA---AAT-CCT----TGAAAGTG----ACATATTTCTGTT-GTTTCTTTT-TG-AAAATTGAAGCA-TGTTTTTGGATTGCAAAG--TTAG--TAA--A---ATATGGAGGAAA----TATATCAAATTAATGGAT
gi|120078 : aaacaaacAAAAACAAGTTTGCCGTTGTCTCTTTTGATTG-----------ATG--T-G--ATGCAACCATG----CATCAGTTAA---CATCAAA--GCGATGTTTCA-AGGGTGATACGTACATGATTTCA---AGT-CCT----TGGAGGTG----ACATGTTTATGTT-ATTTCTTTTAAA-AAAATTGAAGCACTGCTATGGGATTGCCA------AG--C----A---ATATTGAGGATA----TAAATTAAATTAATGGAT
gi|120074 : aatCACGTGTACAAT-ATCTCTTT-GAT-GTTAGCCAACGCACGG-T-G--ACGTCACAGT------------------CATCCAA--GAGACG----A-CAGC--AAACGT--GTTATTTCA---
gi|120063 : aaacagactagccaatagcagtattattcttgctgtactgaaTCTCTTT-GAT-GTTAGCCGACGCACGG-T-G--ACGTCACAGT------------------CATCAAA--GAGACG----A-CAGC--AAACGTGT-TG-TTTCATTCAGTACATGCAATGAAAGTGT---GCA-GTTTGTaaacgtacataattt
gi|120067 : aaTCACTTT-GAT-GTTAGACGACGCACGG-T-G--ACTTCACAGT------------------CATCAAA--GAGATG----A-CAGT--AAACGTGT-TG-TTTCA---tattgtacgggcgaaacgtacatgatttccttgaaaatgacatgtttatgtcgtttctttttgaaaattgaagcatgtttttggattgcgaagttagtaatatggaggaaatatatcaaattaatggataa
gi|120066 : aaacaaactgcacaatttcattgcatgtgttaaaTCTCTTT-GAT-GTTAGCCGACGCACGC-T-G--ACGTCACAGT------------------CATCAAA--GAGACG----A-CAGC--AAACGTGT-TG-TTTCA---tattgtaagggtgaaacgtacatgatttcaagtccttgaaagtgacatgtttatgtcgtttcattttgaaaattgaagcatgtttttggattgcgaagttatggaggaaatatatcaaattaatggataa
gi|120069 : aaacaaactgcactatttcattgcatgtattgaaTCCCTTT-GAT-G-----------TTAG-CCG--ACGT-ACCGTGATGTCA-CAGT------CATCAAA--GAGACG----A-CAGC--AAACGTGT-TG-TTTCA---tattgtatgggtcaaatgtacatgatttcaagttctcgaaagtgacatgtttatatcgtttctttttgataactgtagcatgtttttggatcgcaaagttagtaatatggaggaaatatatcaatttaatggataa
gi|120076 : aaacaaactgcacaatttcattgcatgttttgaaTCTCTTT-GAT-ATTAGCCAAAGCACGG-T-G--ACATCACAGT------------------CATCAAA--GAGATG----A-CAGC--AAATGTGT-TG-TTTCA---tattgtaagggtgaaatgtacatgatttcaagtccttgaaaatgacatgtttatttcagtttttttttaaaactgaagcatgttgttggattgggaagttagtaacatggaggaaatatatcaaattaatggataa
gi|120070 : acaaactgcataatttcattgcatgtattaaaTCCCTTT-GAT-G-----------TTAGCT-G--ACG-CATGGTG-----AT--GTCAAAATCATCAAA--GAGACA----A-CAGC--AAACGT--GTTATTTCA---tattgtacgggtgaaacgtacatgatttcaagtcaatgaaagtgacatgtttatgtcatttctttttgaaaattgaagcatgtttttggattgcaaagatagtttaatatggaggaaatatattaattgataatatata
gi|120077 : aaacaaactgcataattccattgcatgtattgaa-GAT-GC----------ATGG-T-G--ACGTCACAGT------------------CATCAAA--GAGACGtattgtaaaggtgaaacatacatgatttcaagtccttgaaagtgacatgtttatgtcatttcttttgaaaattgaagcatgttgttggattacgaagtaatatggaggaaatatatcaatttaatagataa
gi|120079 : acaaatttgcacaatttcattgcatgtattgaatgaaacaacacatttgttttA---TATTAAA--GGATTGCAGCA-TAGC---AATGTACATAA----A---AGT-ACT----TGAAAATG----ACATGGTTATGTA-ATTTCTTTT-CA-AAAATTTAAACA-C-TTGTCAGATTTCGTAG--TTTG--TT---A---ATGTGGAGGAAATTATTATATCAAAATAATGGATggctaacatcaaagggatattgtaagggtgaaacatacatgatttcaagttcttgaaagtggcatgtttatgtcgcttcattttgaaaattgaagcatgttgttggattgctttgttagtattcatatggaggaaatatcaagttaatggataa
gi|120080 : A---TATCACA--GGAATTTTAT--CGGT-GTAATGTACATAA----A---ACT-CCT----TGAAAGTGTCAGACATGTTCATGTC-ATTTATTTT-TA-AAAATTTAAACA-C-TTGTCAGATTGCGTAG--
gi|120081 : A---TATCAAA--GGAAT--TCTA-TCGATGTAATGTACATAA----A---AGT-CCT----TGAAAGTG----TCA--TTTA-----------TTT-TGAAAAATTTAAACA-C-TTGTCAGATTTC---G--T--------------------AGGAAA----TATATCAAAATAATGGAT
gi|120082 : GAAATGTACATAA--------AGT-CCT----TGAACGTGTCAGACATGTTTATGTC-ATTTC----------AATTTAAACACTGTTGTCAGATTTCT-AGTCTTAT--TCATAA---ATGTGGAGGAAG----TATATAAA
Alignments
lowQualScore : 1111111111 1111
lowQualScore : 5 1111111111 2 2 33 22 1 77 2 333 8888 2 0 2 4 1 2 0 33 33 0000 444 5555
lowQualScore : . .......... . . .. .. . .. . ... .... . . . . . . . .. .. .... ... ....
lowQualScore : 3 7777777777 5 5 44 88 1 66 0 444 9999 1 2 1 4 0 9 5 11 22 6666 111 0000
consensus : AAACAAACT-GCACAAT----------TTCATTGCATGTATTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCACCGTGCGTCGGCTAACATCAA--AGGGATATTGTANGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTTTCTTTT-TGAAAATTGAAGCA-TGTTNTCGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
Reference ( family-825 ) : AAACAAACT-GCACAAT----------TTCATTGCATGTATTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCACCGTGCGTCGGCTAACATCAA--AGGGATATTGTACGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTTTCTTTT-TGAAAATTGAAGCA-TGTTNTCGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120063 : AAACAAACT-GCACACT----------TTCATTGCATGTACTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCACCGTGCGTCGGCTAACATCAA--AGAGATATTGTACGGGC-GAAACGTACATGATT-----TCCTTGAAAATG----ACATGTTTATGTC-GTTTCTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120064 : AAACAAACT-GCACAGT----------TTCATTGCATGTACTAAACGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--GGTGACGTCACCGTGCATCGGCTAACATCAA--AGAGATGTTGTACGGCC-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTGTCTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120065 : AAACGAACT-GCACAAT----------TTCATTGCATATATTGAATGAAACAACACGTTTGCTGTCGTCTCTTC-GAT-GAC--TGTGACGTCACCCTGCGTCGGCTAACATTAA--AGGGATATTGTAAGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ATTTGTTTATGTC-GTTTCGTTT-TGAAAGTTGAAGCA-TGTTTTTGGATGGCGAAG--TTAG--T----T---ATATGGAAGAAA----TATATCAAATTAATGGATAA
gi|120066 : AAACAAACT-GCACTAT----------TTCATTGCATGTATTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCAGCGTGCGTCGGCTAACATCAA--AGAGATATTGTATGGGT-CAAATGTACATGATTTCAAGTTCTCGAAAGTG----ACATGTTTATATC-GTTTCTTTT-TGATAACTGTAGCA-TGTTTTTGGATCGCAAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAATTTAATGGATAA
gi|120067 : AAACAAACT-GCACAAT----------TTCATTGCATGTGTTAAATGAAACAACACGTTTACTGTCATCTCTTT-GAT-GAC--TGTGAAGTCACCGTGCGTCGTCTAACATCAA--AGTGATATTGTAAGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTTTCATTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCGAAG--T---------------TATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120068 : AAACAAACT-GCACAAT----------TTCATTGCATGTATTGAATGAAACAACATGTTTGCTGTCGTCTCTTT-GAT-AAC--TGTGACGTCACTGTGCATCGGTGGACATCAA--AGAGATATTGTACTGGT-GAAATGTATATGATTTCAAGCCCTTGAAAGTG----ACATGTTTATGTT-GTTTTTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120069 : AAACAAACT-GCACAAT----------TTCATTGCATGTTTTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACATCACGGTACGTCGGCTAACATCAA--AGGGATATTGTAAGGGT-GAAATGTACATGATTTCAAGTCCTTGAAAATG----ACATGTTTATTTCAGTTTTTTTT-T-AAAACTGAAGCA-TGTTGTTGGATTGGGAAG--TTAG--T----A---ACATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120070 : AAACAAACT-GCATAAT----------TCCATTGCATGTATTGAATGAAATAACACGTTTGCTGTTGTCTCTTT-GAT-GAT--TTTGACATCACCATGCGTCAGCTAACATCAA--AGGGATATTGTAAAGGT-GAAACATACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-ATTTC-TTT-TGAAAATTGAAGCA-TGTTGTTGGATTACGA------AG--T----A---ATATGGAGGAAA----TATATCAATTTAATAGATAA
gi|120071 : AAAAAAACT-GCACAAT----------TCCATTGCATGTATTGAATGAAATAAAACATTTGCTGTCGTTTCTTT-GAT-GAC--TGTGACATCACTGTGTGTCGGCTAACATCAA--AGGGATTTTATAAGGGT-TAAACATACATGATTTCAAGTCCTCATAAGTG----ACATGTTTATGTC-GTTTCTTTT-TTAAAATTGAAGCA-TGTTGCTGGATTGCGAAG--TTAG--T----A---ATATTGAGGAAA----TATATCA
gi|120072 : AAACAAACT-GCGCAAT----------TTCATTGCATGTATTGAATGAAACAACACGTTGGCTGTCGTCTCTTT-GAA-GAC--TGTGACGTCACCTTGCATCAGCTAACATCAA--AGGGATATTGTATGGGT-G--------ATAAT---AAGTCTTTGAAAGTG----ACATGTTTATGTC-ATTTCTTTT-TGGAAATTGAAGCA-TGTTTTTGGATTGCAAAG--TTAG--T----A---ATATGG-GAAAA----TATATCAAATTATTGGATAAgt
gi|120073 : AAACAAACT-GCAC---------------------------TGAATTAAACAATACGTTGGCTGTTGTCTCTTT-GAA-GAC--TGTGACGTCACTGTGCGTCAGCTAACATCAG--AGGGATATTGCAACGGT-GAAACGTACATCATTTCAAATCCTTGAAAGTG----ACATATTTCTGTT-GTTTCTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCAAAG--TTAG--TAA--A---ATATGGAGGAAA----TATATCAAATTAATGGAT
gi|120074 : AAACAGACTAGC-CAATAGCAGTATTATTC-TTGC-TGTACTGAATGAAATAACACGTTTGCTGTCGTCTCTTG-GAT-GAC--TGTGACGTCACCGTGCGTTGGCTAACATCAA--AGAGATATTGTACACGT-GAAACGTACATAATTT
gi|120075 : AAAAAAAT-GTACTAT----------TTCATCGTATGTATTGAATGGAACAAGACGCTT---------TTTTA-AAT-G-CGGTGTGACGTAACCACGCGTTGGCGAGTATCAAAGAGAGATATTGCAT-AGC-GAACTGAGCATAG----AAGTCTTTGAAAATG----ACATCCTTACGTC-ATTTCTTTC-AAAAAAGTAAA
gi|120076 : ACAAACT-GCATAAT----------TTCATTGCATGTATTAAATGAAACAACACATTTGCTGTCATCTCTTT-GAT-GAC--TGTGATGTCACCGTGCTTTGGCTAATATCAA--AGAGATATTGTACGGGT-GAAACGTACATGATTTCAAGTCAATGAAAGTG----ACATGTTTATGTC-ATTTCTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCAAAG--ATAGTTT----A---ATATGGAGGAAA----TAT-----ATTAATTGATAA
gi|120077 : ACAAATTTGCACAAT----------TTCATTGCATGTATTGAATGAAACAACACATTTGTTTTCGTCTCTTT-GAT-GAC--TGTGACGTCACCATGCATCGGCTAACATCAA--AGGGATATTGTAAGGGT-GAAACATACATGATTTCAAGTTCTTGAAAGTG----GCATGTTTATGTC-GCTTCATTT-TGAAAATTGAAGCA-TGTTGTTGGATTGCTTTG--TTAG--T----ATTCATATGGAGGAA------ATATCAAGTTAATGGATAAtatata
gi|120078 : AATAAAA--ACAAGTTTGCCGTTGTCTCTTTTGATTGA---TGTGATGCAACCATGCATCAGTTAACATCAA--AGCGATGTTTCAAGGGT-GATACGTACATGATTTCAAGTCCTTGGAGGTG----ACATGTTTATGTT-ATTTCTTTTAAAAAAATTGAAGCACTGCTATGGGATTGCCA------AG--C----A---ATATTGAGGATA----TAAATTAAATTAATGGAT
gi|120079 : ATATTAA--AGG---ATTGCA-GCATAGCAATGTACATAA----AAGTACTTGAAAATG----ACATGGTTATGTA-ATTTCTTTT-CAAAAATTTAAACA-C-TTGTCAGATTTCGTAG--TTTG--TT---A---ATGTGGAGGAAATTATTATATCAAAATAATGGAT
gi|120080 : ATATCAC--AGGAAT-TT-TATCGGT-GTAATGTACATAA----AACTCCTTGAAAGTGTCAGACATGTTCATGTC-ATTTATTTT-TAAAAATTTAAACA-C-TTGTCAGATTGCGTAG--
gi|120081 : ATATCAA--AGGAAT--TCTATCGAT-GTAATGTACATAA----AAGTCCTTGAAAG---------------TGTC-ATTTATTTT-GAAAAATTTAAACA-C-TTGTCAGATTTC---G--T--------------------AGGAAA----TATATCAAAATAATGGAT
gi|120082 : CAA--AGGAAT-TT-CATTGAT-GAAATGTACATAA-----AGTCCTTGAACGTGTCAGACATGTTTATGTC-ATTTC---------AATTTAAACACTGTTGTCAGATTTCT-AGTCTTAT--TCATAA---ATGTGGAGGAAG----TATATAAA
Alignments
lowQualScore : 1111111111 1111
lowQualScore : 5 1111111111 2 2 33 22 1 33 2 333 8888 2 0 2 4 1 2 0 33 33 0000 444 5555
lowQualScore : . .......... . . .. .. . .. . ... .... . . . . . . . .. .. .... ... ....
lowQualScore : 3 7777777777 5 5 44 88 1 33 0 444 9999 1 2 1 4 0 9 5 11 22 6666 111 0000
consensus : AAACAAACT-GCACAAT----------TTCATTGCATGTATTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCACCGTGCGTCGGCTAACATCAA--AGGGATATTGTANGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTTTCTTTT-TGAAAATTGAAGCA-TGTTNTCGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
Reference ( family-825 ) : AAACAAACT-GCACAAT----------TTCATTGCATGTATTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCACCGTGCGTCGGCTAACATCAA--AGGGATATTGTANGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTTTCTTTT-TGAAAATTGAAGCA-TGTTNTCGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120063 : AAACAAACT-GCACACT----------TTCATTGCATGTACTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCACCGTGCGTCGGCTAACATCAA--AGAGATATTGTACGGGC-GAAACGTACATGATT-----TCCTTGAAAATG----ACATGTTTATGTC-GTTTCTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120064 : AAACAAACT-GCACAGT----------TTCATTGCATGTACTAAACGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--GGTGACGTCACCGTGCATCGGCTAACATCAA--AGAGATGTTGTACGGCC-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTGTCTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120065 : AAACGAACT-GCACAAT----------TTCATTGCATATATTGAATGAAACAACACGTTTGCTGTCGTCTCTTC-GAT-GAC--TGTGACGTCACCCTGCGTCGGCTAACATTAA--AGGGATATTGTAAGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ATTTGTTTATGTC-GTTTCGTTT-TGAAAGTTGAAGCA-TGTTTTTGGATGGCGAAG--TTAG--T----T---ATATGGAAGAAA----TATATCAAATTAATGGATAA
gi|120066 : AAACAAACT-GCACTAT----------TTCATTGCATGTATTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCAGCGTGCGTCGGCTAACATCAA--AGAGATATTGTATGGGT-CAAATGTACATGATTTCAAGTTCTCGAAAGTG----ACATGTTTATATC-GTTTCTTTT-TGATAACTGTAGCA-TGTTTTTGGATCGCAAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAATTTAATGGATAA
gi|120067 : AAACAAACT-GCACAAT----------TTCATTGCATGTGTTAAATGAAACAACACGTTTACTGTCATCTCTTT-GAT-GAC--TGTGAAGTCACCGTGCGTCGTCTAACATCAA--AGTGATATTGTAAGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTTTCATTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCGAAG--T---------------TATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120068 : AAACAAACT-GCACAAT----------TTCATTGCATGTATTGAATGAAACAACATGTTTGCTGTCGTCTCTTT-GAT-AAC--TGTGACGTCACTGTGCATCGGTGGACATCAA--AGAGATATTGTACTGGT-GAAATGTATATGATTTCAAGCCCTTGAAAGTG----ACATGTTTATGTT-GTTTTTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120069 : AAACAAACT-GCACAAT----------TTCATTGCATGTTTTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACATCACGGTACGTCGGCTAACATCAA--AGGGATATTGTAAGGGT-GAAATGTACATGATTTCAAGTCCTTGAAAATG----ACATGTTTATTTCAGTTTTTTTT-T-AAAACTGAAGCA-TGTTGTTGGATTGGGAAG--TTAG--T----A---ACATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120070 : AAACAAACT-GCATAAT----------TCCATTGCATGTATTGAATGAAATAACACGTTTGCTGTTGTCTCTTT-GAT-GAT--TTTGACATCACCATGCGTCAGCTAACATCAA--AGGGATATTGTAAAGGT-GAAACATACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-ATTTC-TTT-TGAAAATTGAAGCA-TGTTGTTGGATTACGA------AG--T----A---ATATGGAGGAAA----TATATCAATTTAATAGATAA
gi|120071 : AAAAAAACT-GCACAAT----------TCCATTGCATGTATTGAATGAAATAAAACATTTGCTGTCGTTTCTTT-GAT-GAC--TGTGACATCACTGTGTGTCGGCTAACATCAA--AGGGATTTTATAAGGGT-TAAACATACATGATTTCAAGTCCTCATAAGTG----ACATGTTTATGTC-GTTTCTTTT-TTAAAATTGAAGCA-TGTTGCTGGATTGCGAAG--TTAG--T----A---ATATTGAGGAAA----TATATCA
gi|120072 : AAACAAACT-GCGCAAT----------TTCATTGCATGTATTGAATGAAACAACACGTTGGCTGTCGTCTCTTT-GAA-GAC--TGTGACGTCACCTTGCATCAGCTAACATCAA--AGGGATATTGTATGGGT-G--------ATAAT---AAGTCTTTGAAAGTG----ACATGTTTATGTC-ATTTCTTTT-TGGAAATTGAAGCA-TGTTTTTGGATTGCAAAG--TTAG--T----A---ATATGG-GAAAA----TATATCAAATTATTGGATAAgt
gi|120073 : AAACAAACT-GCAC---------------------------TGAATTAAACAATACGTTGGCTGTTGTCTCTTT-GAA-GAC--TGTGACGTCACTGTGCGTCAGCTAACATCAG--AGGGATATTGCAACGGT-GAAACGTACATCATTTCAAATCCTTGAAAGTG----ACATATTTCTGTT-GTTTCTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCAAAG--TTAG--TAA--A---ATATGGAGGAAA----TATATCAAATTAATGGAT
gi|120074 : AAACAGACTAGC-CAATAGCAGTATTATTC-TTGC-TGTACTGAATGAAATAACACGTTTGCTGTCGTCTCTTG-GAT-GAC--TGTGACGTCACCGTGCGTTGGCTAACATCAA--AGAGATATTGTACACGT-GAAACGTACATAATTT
gi|120075 : AAAAAAAT-GTACTAT----------TTCATCGTATGTATTGAATGGAACAAGACGCTT---------TTTTA-AAT-G-CGGTGTGACGTAACCACGCGTTGGCGAGTATCAAAGAGAGATATTGCAT-AGC-GAACTGAGCATAG----AAGTCTTTGAAAATG----ACATCCTTACGTC-ATTTCTTTC-AAAAAAGTAAA
gi|120076 : ACAAACT-GCATAAT----------TTCATTGCATGTATTAAATGAAACAACACATTTGCTGTCATCTCTTT-GAT-GAC--TGTGATGTCACCGTGCTTTGGCTAATATCAA--AGAGATATTGTACGGGT-GAAACGTACATGATTTCAAGTCAATGAAAGTG----ACATGTTTATGTC-ATTTCTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCAAAG--ATAGTTT----A---ATATGGAGGAAA----TAT-----ATTAATTGATAA
gi|120077 : ACAAATTTGCACAAT----------TTCATTGCATGTATTGAATGAAACAACACATTTGTTTTCGTCTCTTT-GAT-GAC--TGTGACGTCACCATGCATCGGCTAACATCAA--AGGGATATTGTAAGGGT-GAAACATACATGATTTCAAGTTCTTGAAAGTG----GCATGTTTATGTC-GCTTCATTT-TGAAAATTGAAGCA-TGTTGTTGGATTGCTTTG--TTAG--T----ATTCATATGGAGGAA------ATATCAAGTTAATGGATAAtatata
gi|120078 : AATAAAA--ACAAGTTTGCCGTTGTCTCTTTTGATTGA---TGTGATGCAACCATGCATCAGTTAACATCAA--AGCGATGTTTCAAGGGT-GATACGTACATGATTTCAAGTCCTTGGAGGTG----ACATGTTTATGTT-ATTTCTTTTAAAAAAATTGAAGCACTGCTATGGGATTGCCA------AG--C----A---ATATTGAGGATA----TAAATTAAATTAATGGAT
gi|120079 : ATATTAA--AGG---ATTGCA-GCATAGCAATGTACATAA----AAGTACTTGAAAATG----ACATGGTTATGTA-ATTTCTTTT-CAAAAATTTAAACA-C-TTGTCAGATTTCGTAG--TTTG--TT---A---ATGTGGAGGAAATTATTATATCAAAATAATGGAT
gi|120080 : ATATCAC--AGGAAT-TT-TATCGGT-GTAATGTACATAA----AACTCCTTGAAAGTGTCAGACATGTTCATGTC-ATTTATTTT-TAAAAATTTAAACA-C-TTGTCAGATTGCGTAG--
gi|120081 : ATATCAA--AGGAAT--TCTATCGAT-GTAATGTACATAA----AAGTCCTTGAAAG---------------TGTC-ATTTATTTT-GAAAAATTTAAACA-C-TTGTCAGATTTC---G--T--------------------AGGAAA----TATATCAAAATAATGGAT
gi|120082 : CAA--AGGAAT-TT-CATTGAT-GAAATGTACATAA-----AGTCCTTGAACGTGTCAGACATGTTTATGTC-ATTTC---------AATTTAAACACTGTTGTCAGATTTCT-AGTCTTAT--TCATAA---ATGTGGAGGAAG----TATATAAA
blockSeqs : A AGCAGTATTA T T GG AG G CG A TTT TCAG A A C T T TC TT CATA TTC TTAT
blockSeqs : T . . . . . A AG . TTT TCAG . . C T T . . AA . .
blockSeqs : . . . . . . A TG . TTT . . . . T T . . T . .
blockSeqs : . . . . . . A AG . TTT . . . . T T . . . . .
blockSeqs : . . . . . . A CT . TTT . . . . T T . . . . .
blockSeqs : . . . . . . A AG . TTT . . . . G T . . . . .
blockSeqs : . . . . . . A AA . TTT . . . . G T . . . . .
blockSeqs : . . . . . . T AG . TTT . . . . G T . . . . .
blockSeqs : . . . . . . A TG . TTT . . . . T T . . . . .
blockSeqs : . . . . . . A AC . TTT . . . . T T . . . . .
blockSeqs : . . . . . . A CA . TTT . . . . T T . . . . .
blockSeqs : . . . . . . A CG . TTT . . . . G T . . . . .
blockSeqs : . . . . . . A AG . TTT . . . . A G . . . . .
blockSeqs : . . . . . . A AG . T . . . . G C . . . . .
blockSeqs : . . . . G TC . . . . . . G C . . . . .
blockSeqs : . A TC . . . . . . G C . . . . .
blockSeqs : . . TT . . . . . . G C .
blockSeqs : . . T . . . . .
blockSeqs : . . G . .
blockSeqCons : TTT
originalCons : AAACAAACT-GCACAAT----------TTCATTGCATGTATTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCACCGTGCGTCGGCTAACATCAA--AGGGATATTGTANGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTTTCTTTT-TGAAAATTGAAGCA-TGTTNTCGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
finalCons : AAACAAACT-GCACAAT----------TTCATTGCATGTATTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCACCGTGCGTCGGCTAACATCAA--AGGGATATTGTANGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTTTCTTTT-TGAAAATTGAAGCA-TGTTNTCGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
Alignments
lowQualScore : 1111111111 1111
lowQualScore : 5 1111111111 2 2 33 22 1 33 2 333 8888 2 0 2 4 1 2 0 33 33 0000 444 5555
lowQualScore : . .......... . . .. .. . .. . ... .... . . . . . . . .. .. .... ... ....
lowQualScore : 3 7777777777 5 5 44 88 1 33 0 444 9999 1 2 1 4 0 9 5 11 22 6666 111 0000
consensus : AAACAAACT-GCACAAT----------TTCATTGCATGTATTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCACCGTGCGTCGGCTAACATCAA--AGGGATATTGTANGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTTTCTTTT-TGAAAATTGAAGCA-TGTTNTCGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
Reference ( family-825 ) : AAACAAACT-GCACAAT----------TTCATTGCATGTATTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCACCGTGCGTCGGCTAACATCAA--AGGGATATTGTANGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTTTCTTTT-TGAAAATTGAAGCA-TGTTNTCGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120063 : AAACAAACT-GCACACT----------TTCATTGCATGTACTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCACCGTGCGTCGGCTAACATCAA--AGAGATATTGTACGGGC-GAAACGTACATGATT-----TCCTTGAAAATG----ACATGTTTATGTC-GTTTCTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120064 : AAACAAACT-GCACAGT----------TTCATTGCATGTACTAAACGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--GGTGACGTCACCGTGCATCGGCTAACATCAA--AGAGATGTTGTACGGCC-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTGTCTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120065 : AAACGAACT-GCACAAT----------TTCATTGCATATATTGAATGAAACAACACGTTTGCTGTCGTCTCTTC-GAT-GAC--TGTGACGTCACCCTGCGTCGGCTAACATTAA--AGGGATATTGTAAGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ATTTGTTTATGTC-GTTTCGTTT-TGAAAGTTGAAGCA-TGTTTTTGGATGGCGAAG--TTAG--T----T---ATATGGAAGAAA----TATATCAAATTAATGGATAA
gi|120066 : AAACAAACT-GCACTAT----------TTCATTGCATGTATTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACGTCAGCGTGCGTCGGCTAACATCAA--AGAGATATTGTATGGGT-CAAATGTACATGATTTCAAGTTCTCGAAAGTG----ACATGTTTATATC-GTTTCTTTT-TGATAACTGTAGCA-TGTTTTTGGATCGCAAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAATTTAATGGATAA
gi|120067 : AAACAAACT-GCACAAT----------TTCATTGCATGTGTTAAATGAAACAACACGTTTACTGTCATCTCTTT-GAT-GAC--TGTGAAGTCACCGTGCGTCGTCTAACATCAA--AGTGATATTGTAAGGGT-GAAACGTACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-GTTTCATTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCGAAG--T---------------TATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120068 : AAACAAACT-GCACAAT----------TTCATTGCATGTATTGAATGAAACAACATGTTTGCTGTCGTCTCTTT-GAT-AAC--TGTGACGTCACTGTGCATCGGTGGACATCAA--AGAGATATTGTACTGGT-GAAATGTATATGATTTCAAGCCCTTGAAAGTG----ACATGTTTATGTT-GTTTTTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCGAAG--TTAG--T----A---ATATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120069 : AAACAAACT-GCACAAT----------TTCATTGCATGTTTTGAATGAAACAACACGTTTGCTGTCGTCTCTTT-GAT-GAC--TGTGACATCACGGTACGTCGGCTAACATCAA--AGGGATATTGTAAGGGT-GAAATGTACATGATTTCAAGTCCTTGAAAATG----ACATGTTTATTTCAGTTTTTTTT-T-AAAACTGAAGCA-TGTTGTTGGATTGGGAAG--TTAG--T----A---ACATGGAGGAAA----TATATCAAATTAATGGATAA
gi|120070 : AAACAAACT-GCATAAT----------TCCATTGCATGTATTGAATGAAATAACACGTTTGCTGTTGTCTCTTT-GAT-GAT--TTTGACATCACCATGCGTCAGCTAACATCAA--AGGGATATTGTAAAGGT-GAAACATACATGATTTCAAGTCCTTGAAAGTG----ACATGTTTATGTC-ATTTC-TTT-TGAAAATTGAAGCA-TGTTGTTGGATTACGA------AG--T----A---ATATGGAGGAAA----TATATCAATTTAATAGATAA
gi|120071 : AAAAAAACT-GCACAAT----------TCCATTGCATGTATTGAATGAAATAAAACATTTGCTGTCGTTTCTTT-GAT-GAC--TGTGACATCACTGTGTGTCGGCTAACATCAA--AGGGATTTTATAAGGGT-TAAACATACATGATTTCAAGTCCTCATAAGTG----ACATGTTTATGTC-GTTTCTTTT-TTAAAATTGAAGCA-TGTTGCTGGATTGCGAAG--TTAG--T----A---ATATTGAGGAAA----TATATCA
gi|120072 : AAACAAACT-GCGCAAT----------TTCATTGCATGTATTGAATGAAACAACACGTTGGCTGTCGTCTCTTT-GAA-GAC--TGTGACGTCACCTTGCATCAGCTAACATCAA--AGGGATATTGTATGGGT-G--------ATAAT---AAGTCTTTGAAAGTG----ACATGTTTATGTC-ATTTCTTTT-TGGAAATTGAAGCA-TGTTTTTGGATTGCAAAG--TTAG--T----A---ATATGG-GAAAA----TATATCAAATTATTGGATAAgt
gi|120073 : AAACAAACT-GCAC---------------------------TGAATTAAACAATACGTTGGCTGTTGTCTCTTT-GAA-GAC--TGTGACGTCACTGTGCGTCAGCTAACATCAG--AGGGATATTGCAACGGT-GAAACGTACATCATTTCAAATCCTTGAAAGTG----ACATATTTCTGTT-GTTTCTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCAAAG--TTAG--TAA--A---ATATGGAGGAAA----TATATCAAATTAATGGAT
gi|120074 : AAACAGACTAGC-CAATAGCAGTATTATTC-TTGC-TGTACTGAATGAAATAACACGTTTGCTGTCGTCTCTTG-GAT-GAC--TGTGACGTCACCGTGCGTTGGCTAACATCAA--AGAGATATTGTACACGT-GAAACGTACATAATTT
gi|120075 : AAAAAAAT-GTACTAT----------TTCATCGTATGTATTGAATGGAACAAGACGCTT---------TTTTA-AAT-G-CGGTGTGACGTAACCACGCGTTGGCGAGTATCAAAGAGAGATATTGCAT-AGC-GAACTGAGCATAG----AAGTCTTTGAAAATG----ACATCCTTACGTC-ATTTCTTTC-AAAAAAGTAAA
gi|120076 : ACAAACT-GCATAAT----------TTCATTGCATGTATTAAATGAAACAACACATTTGCTGTCATCTCTTT-GAT-GAC--TGTGATGTCACCGTGCTTTGGCTAATATCAA--AGAGATATTGTACGGGT-GAAACGTACATGATTTCAAGTCAATGAAAGTG----ACATGTTTATGTC-ATTTCTTTT-TGAAAATTGAAGCA-TGTTTTTGGATTGCAAAG--ATAGTTT----A---ATATGGAGGAAA----TAT-----ATTAATTGATAA
gi|120077 : ACAAATTTGCACAAT----------TTCATTGCATGTATTGAATGAAACAACACATTTGTTTTCGTCTCTTT-GAT-GAC--TGTGACGTCACCATGCATCGGCTAACATCAA--AGGGATATTGTAAGGGT-GAAACATACATGATTTCAAGTTCTTGAAAGTG----GCATGTTTATGTC-GCTTCATTT-TGAAAATTGAAGCA-TGTTGTTGGATTGCTTTG--TTAG--T----ATTCATATGGAGGAA------ATATCAAGTTAATGGATAAtatata
gi|120078 : AATAAAA--ACAAGTTTGCCGTTGTCTCTTTTGATTGA---TGTGATGCAACCATGCATCAGTTAACATCAA--AGCGATGTTTCAAGGGT-GATACGTACATGATTTCAAGTCCTTGGAGGTG----ACATGTTTATGTT-ATTTCTTTTAAAAAAATTGAAGCACTGCTATGGGATTGCCA------AG--C----A---ATATTGAGGATA----TAAATTAAATTAATGGAT
gi|120079 : ATATTAA--AGG---ATTGCA-GCATAGCAATGTACATAA----AAGTACTTGAAAATG----ACATGGTTATGTA-ATTTCTTTT-CAAAAATTTAAACA-C-TTGTCAGATTTCGTAG--TTTG--TT---A---ATGTGGAGGAAATTATTATATCAAAATAATGGAT
gi|120080 : ATATCAC--AGGAAT-TT-TATCGGT-GTAATGTACATAA----AACTCCTTGAAAGTGTCAGACATGTTCATGTC-ATTTATTTT-TAAAAATTTAAACA-C-TTGTCAGATTGCGTAG--
gi|120081 : ATATCAA--AGGAAT--TCTATCGAT-GTAATGTACATAA----AAGTCCTTGAAAG---------------TGTC-ATTTATTTT-GAAAAATTTAAACA-C-TTGTCAGATTTC---G--T--------------------AGGAAA----TATATCAAAATAATGGAT
gi|120082 : CAA--AGGAAT-TT-CATTGAT-GAAATGTACATAA-----AGTCCTTGAACGTGTCAGACATGTTTATGTC-ATTTC---------AATTTAAACACTGTTGTCAGATTTCT-AGTCTTAT--TCATAA---ATGTGGAGGAAG----TATATAAA