lowQualScore : 3 4 6 2 2 2 22
lowQualScore : . . . . . . ..
lowQualScore : 4 2 9 1 1 1 99
consensus : TGATAACCGCAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
Reference ( gi|30500 ) : TGATAACCACAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30489 : TGATAACCTCAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30486 : atTGATAACCGCAATCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30490 : atTGATAACCGCAACCCTTAGTGTAGCA-AAATGAAT-TTT-ATGTGTA-TGTG--ATTTGGTG
gi|30491 : atTGATAACCGCAACCCTTAGTGTAAAA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGATG
gi|30493 : atTGATAACCGCAACACTTATTGTAACA-AAACGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30492 : atTGATAACTGCAACCCTTAATGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--TTTTGATG
gi|30494 : atTGATATCTGCAACCCTTAGTGTAACA-AAATAAGT-TTT-ATATAGA-TGTG--ATTTGGCG
gi|30488 : atTGATAACAGTAACCTTTAGTGTAACACAAAT-AAG-TTT-ATGTGGA-TATG--ATTTGATG
gi|30495 : atATGACCACAACCCTTCGTGTAACA-AAATAAGT-TTT-ATGTGGA-TGAG--ATTTAGT
gi|30502 : attcATAACCGCAACCCTTAGTCTAACA-AAATCAG--TTT-ATGTGGA-TGTA--ATTTGGTG
gi|30497 : ATAACCACAACCGTTAGTGTAACA-AAATAAGT-TTTGAAGTGGA-TGTG--ATT
gi|30501 : atttATAACCACAACCCTTAGTGTAACA-AAATAAGT-TTA-TTATGG--TGTG--ATTTG
gi|30496 : ATAACCGCAACTCTTAGTGTAACA-AATTAAA--TTC-ATCTGGA-TGTG--ATTTAGTG
gi|30487 : atttATAACTGCAACCCTTAGTGTACCA-AAAT-AAG-TTT-ATGTGAA-TATG--ATTTGATG
gi|30498 : atttATAACCGTTACCCTTATTGTAACA-AAAT-AAG-TTG-ATGTGGA-TGTG--ATATGGTG
gi|30499 : atttATAACCGCAATCCTTATTGTAACA-AAAT--ATGTGT-ATGTGGA-TATG--ATCTGGCG
gi|30503 : atttATAACCACAGCCCTTAGTGTAACACAAATGAGT-TT---TGTAAATTGTGAAATTTG
gi|30504 : TAACCGCAACCCTAATTGTAATA-AAATAAAT-TTT-ATGTGGA-TGTG--ATTAGGTG
gi|30505 : ACCGCAATCCTTAGTG--ATT-GAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
Alignments
lowQualScore : 4 6 2 2 2 22
lowQualScore : . . . . . ..
lowQualScore : 0 1 0 0 0 88
consensus : TGATAACCGCAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
Reference ( family-822 ) : TGATAACCGCAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30486 : TGATAACCGCAATCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30487 : atATAACTGCAACCCTTAGTGTACCA-AAAT-AAG-TTT-ATGTGAA-TATG--ATTTGATG
gi|30488 : atttTGATAACAGTAACCTTTAGTGTAACACAAAT-AAG-TTT-ATGTGGA-TATG--ATTTGATG
gi|30489 : atTGATAACCTCAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30490 : atTGATAACCGCAACCCTTAGTGTAGCA-AAATGAAT-TTT-ATGTGTA-TGTG--ATTTGGTG
gi|30491 : atTGATAACCGCAACCCTTAGTGTAAAA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGATG
gi|30492 : atTGATAACTGCAACCCTTAATGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--TTTTGATG
gi|30493 : atTGATAACCGCAACACTTATTGTAACA-AAACGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30494 : atTGATATCTGCAACCCTTAGTGTAACA-AAATAAGT-TTT-ATATAGA-TGTG--ATTTGGCG
gi|30495 : atATGACCACAACCCTTCGTGTAACA-AAATAAGT-TTT-ATGTGGA-TGAG--ATTTAGT
gi|30496 : attcATAACCGCAACTCTTAGTGTAACA-AATTAAA--TTC-ATCTGGA-TGTG--ATTTAGTG
gi|30497 : atttATAACCACAACCGTTAGTGTAACA-AAATAAGT-TTTGAAGTGGA-TGTG--ATT
gi|30498 : atttATAACCGTTACCCTTATTGTAACA-AAAT-AAG-TTG-ATGTGGA-TGTG--ATATGGTG
gi|30499 : atttATAACCGCAATCCTTATTGTAACA-AAAT--ATGTGT-ATGTGGA-TATG--ATCTGGCG
gi|30500 : atttTGATAACCACAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30501 : ATAACCACAACCCTTAGTGTAACA-AAATAAGT-TTA-TTATGG--TGTG--ATTTG
gi|30502 : ATAACCGCAACCCTTAGTCTAACA-AAATCAG--TTT-ATGTGGA-TGTA--ATTTGGTG
gi|30503 : ATAACCACAGCCCTTAGTGTAACACAAATGAGT-TT---TGTAAATTGTGAAATTTG
gi|30504 : TAACCGCAACCCTAATTGTAATA-AAATAAAT-TTT-ATGTGGA-TGTG--ATTAGGTG
gi|30505 : ACCGCAATCCTTAGTG--ATT-GAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
Alignments
lowQualScore : 4 6 2 2 2 22
lowQualScore : . . . . . ..
lowQualScore : 0 1 0 0 0 88
consensus : TGATAACCGCAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
Reference ( family-822 ) : TGATAACCGCAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30486 : TGATAACCGCAATCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30487 : atATAACTGCAACCCTTAGTGTACCA-AAAT-AAG-TTT-ATGTGAA-TATG--ATTTGATG
gi|30488 : atttTGATAACAGTAACCTTTAGTGTAACACAAAT-AAG-TTT-ATGTGGA-TATG--ATTTGATG
gi|30489 : atTGATAACCTCAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30490 : atTGATAACCGCAACCCTTAGTGTAGCA-AAATGAAT-TTT-ATGTGTA-TGTG--ATTTGGTG
gi|30491 : atTGATAACCGCAACCCTTAGTGTAAAA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGATG
gi|30492 : atTGATAACTGCAACCCTTAATGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--TTTTGATG
gi|30493 : atTGATAACCGCAACACTTATTGTAACA-AAACGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30494 : atTGATATCTGCAACCCTTAGTGTAACA-AAATAAGT-TTT-ATATAGA-TGTG--ATTTGGCG
gi|30495 : atATGACCACAACCCTTCGTGTAACA-AAATAAGT-TTT-ATGTGGA-TGAG--ATTTAGT
gi|30496 : attcATAACCGCAACTCTTAGTGTAACA-AATTAAA--TTC-ATCTGGA-TGTG--ATTTAGTG
gi|30497 : atttATAACCACAACCGTTAGTGTAACA-AAATAAGT-TTTGAAGTGGA-TGTG--ATT
gi|30498 : atttATAACCGTTACCCTTATTGTAACA-AAAT-AAG-TTG-ATGTGGA-TGTG--ATATGGTG
gi|30499 : atttATAACCGCAATCCTTATTGTAACA-AAAT--ATGTGT-ATGTGGA-TATG--ATCTGGCG
gi|30500 : atttTGATAACCACAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30501 : ATAACCACAACCCTTAGTGTAACA-AAATAAGT-TTA-TTATGG--TGTG--ATTTG
gi|30502 : ATAACCGCAACCCTTAGTCTAACA-AAATCAG--TTT-ATGTGGA-TGTA--ATTTGGTG
gi|30503 : ATAACCACAGCCCTTAGTGTAACACAAATGAGT-TT---TGTAAATTGTGAAATTTG
gi|30504 : TAACCGCAACCCTAATTGTAATA-AAATAAAT-TTT-ATGTGGA-TGTG--ATTAGGTG
gi|30505 : ACCGCAATCCTTAGTG--ATT-GAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
blockSeqs : C G G G T AA
blockSeqs : C G . . . .
blockSeqs : . G . . . .
blockSeqs : . G . . . .
blockSeqs : . G . . . .
blockSeqs : . A . . . .
blockSeqs : . A . . . .
blockSeqs : . A . . . .
blockSeqs : . A . . . .
blockSeqs : . G . . . .
blockSeqs : . A . . . .
blockSeqs : . C . . . .
blockSeqs : . G . . . .
blockSeqs : . A . . . .
blockSeqs : . G . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . . . .
blockSeqCons :
originalCons : TGATAACCGCAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
finalCons : TGATAACCGCAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
Alignments
lowQualScore : 4 6 2 2 2 22
lowQualScore : . . . . . ..
lowQualScore : 0 1 0 0 0 88
consensus : TGATAACCGCAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
Reference ( family-822 ) : TGATAACCGCAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30486 : TGATAACCGCAATCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30487 : atATAACTGCAACCCTTAGTGTACCA-AAAT-AAG-TTT-ATGTGAA-TATG--ATTTGATG
gi|30488 : atttTGATAACAGTAACCTTTAGTGTAACACAAAT-AAG-TTT-ATGTGGA-TATG--ATTTGATG
gi|30489 : atTGATAACCTCAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30490 : atTGATAACCGCAACCCTTAGTGTAGCA-AAATGAAT-TTT-ATGTGTA-TGTG--ATTTGGTG
gi|30491 : atTGATAACCGCAACCCTTAGTGTAAAA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGATG
gi|30492 : atTGATAACTGCAACCCTTAATGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--TTTTGATG
gi|30493 : atTGATAACCGCAACACTTATTGTAACA-AAACGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30494 : atTGATATCTGCAACCCTTAGTGTAACA-AAATAAGT-TTT-ATATAGA-TGTG--ATTTGGCG
gi|30495 : atATGACCACAACCCTTCGTGTAACA-AAATAAGT-TTT-ATGTGGA-TGAG--ATTTAGT
gi|30496 : attcATAACCGCAACTCTTAGTGTAACA-AATTAAA--TTC-ATCTGGA-TGTG--ATTTAGTG
gi|30497 : atttATAACCACAACCGTTAGTGTAACA-AAATAAGT-TTTGAAGTGGA-TGTG--ATT
gi|30498 : atttATAACCGTTACCCTTATTGTAACA-AAAT-AAG-TTG-ATGTGGA-TGTG--ATATGGTG
gi|30499 : atttATAACCGCAATCCTTATTGTAACA-AAAT--ATGTGT-ATGTGGA-TATG--ATCTGGCG
gi|30500 : atttTGATAACCACAACCCTTAGTGTAACA-AAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG
gi|30501 : ATAACCACAACCCTTAGTGTAACA-AAATAAGT-TTA-TTATGG--TGTG--ATTTG
gi|30502 : ATAACCGCAACCCTTAGTCTAACA-AAATCAG--TTT-ATGTGGA-TGTA--ATTTGGTG
gi|30503 : ATAACCACAGCCCTTAGTGTAACACAAATGAGT-TT---TGTAAATTGTGAAATTTG
gi|30504 : TAACCGCAACCCTAATTGTAATA-AAATAAAT-TTT-ATGTGGA-TGTG--ATTAGGTG
gi|30505 : ACCGCAATCCTTAGTG--ATT-GAATGAAT-TTT-ATGTGGA-TGTG--ATTTGGTG