lowQualScore : 00 111 11 2 2222 0 0 0 0
lowQualScore : .. ... .. . .... . . . .
lowQualScore : 66 111 33 8 8888 8 4 4 8
consensus : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
Reference ( gi|53859 ) : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53860 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53857 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-C-GGG-ATCG-AACCCGCAACCTCT
gi|53865 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTAT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53870 : GCTTCCTGGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACTCGCAACCTCT
gi|53868 : GCTTCCTGGGTAGAATCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACTTCT
gi|53879 : GCTTCCTGGGTAGAACAAGTACTGAGTG--TTG---CTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53885 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCA-AACCAGCAACCTCT
gi|53880 : GCTTCCTGTGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCTGCAACCTCT
gi|53887 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGATCGAGCT-G-GGG-AACG-AACCCGCAACCTCT
gi|53898 : GCTTCCTGGGTATAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCGAAACCCGCAACCTCT
gi|53858 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-C-GGG-ATCG-AACCCACAGCCTCT
gi|53906 : GCTTCCTGGGTAGAACCAGTACCGAGTG--TTG---TTTA-ATGAGAGG-C----ATCGGATCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53864 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGCT-G-GGG-ATAG-AACCCGTAACCTCT
gi|53917 : GCTTCCTAGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATCG-AACCTGCAACCTCT
gi|53897 : GCTTCCTGGGTAGAGCCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGAT-G-GGG-ATCG-ACCCCGCAACCTCT
gi|53923 : GCTTACTGGATAGAACCAGTAATGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53920 : GCTTCCTGGGTACAACCAGTACTGAGTG--TTG---ATTT-ATGAGAGG-C----ATCGGGCCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53925 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATTG-AACCAGCTACCTCT
gi|53888 : GCTTTCTTGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53891 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCG-GCC-GAGGG-ATCG-AACCCGCAACCTCT
gi|53862 : GCTTCCTGGGTAGAACCAGCACTAAGTG--TTA---TTTT-ATGAGAGG-C----ATCAGGTCGAGCT-G-GGG-ATCG-AACCCACAACCTCT
gi|53932 : GCTTCCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT-ATGAGAGA-C----ATCGGGTCAAGCT-G-GGA-ATCA-AACCCGCAACCTCT
gi|53904 : GCTTCCTGGGTAGAACCAGTACTGAATG--TTG---TTTT-ATGAGAGG-C----AGCAGGTCGAACT-G-GGG-ATCG-AATCCGCAACCTCT
gi|53948 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-A-GGG-ATTT-AACCTGCAACCTCT
gi|53933 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAACCG-A-GGG-ATCG-AACCCGCAACCTTT
gi|53924 : GCTTCCTGGGTAAAACCAGTAATGAGTG--TTG---TTTT-ATGAGAAG-C----ATCGGGTCGAGTT-G-GGG-ATCG-AACCGGCAACCTCT
gi|53900 : GTTTCCTGAGAAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-GACCCCCAACCTCT
gi|53894 : GCTTCCTGTGTAGAACCAATACTGAGTG--TTG---TTTT-ATGAAAGG-C----ATCGGGTCGAGCT-T-GGG-ATCG-AACCCGTAACCTCT
gi|53965 : GCTTCCTATATAGAACCAGTACTGAGTG--TTG---TTTA-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGA-ATCG-AACCCGCAACCTCT
gi|53929 : GCTTCCTGGGTAGAACCAGTACTGAGTA--ATG---TTTT-ATGAGAGG-C----ATCAGTTCAAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53946 : GCTTCCTGGGTAGAACCAGTACTGAGTA--TTG---TTTT-GTGAGAGG-T----ATCGGGTCGAAAT-G-GGA-ATCG-AACCCGCAACCTCT
gi|53863 : GTTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCTGGTCGATCG-G-GGA-ATCG-AACCCGCAACCTCT
gi|53964 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTGT-ATGAGAGG-C----ATCGGGTCATGCT-G-GTG-ATCG-AACTCGCAACCTCT
gi|53890 : GTTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCCGGTCGACCA-G-GGG-ATCG-AACCTGCAACCTCT
gi|53947 : GCTTCCTGGGTAGAACCAGTACTGAGTA--TTG---TTTT-ATGAGAGG-C----GTCGAGTCGATCG-A-GGG-ATCG-AACCCGCAACCTCT
gi|53959 : GCTTCCCGGCAAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATCA-AACCCACAACCTCT
gi|53927 : GCTTCCTGAATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGAT-G-GGG-ATCG-AACCTACGACCTC
gi|53875 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATTGGGTTGACCA-G-GGG-ATCA-AACCCACAACCTCT
gi|53908 : GTTTCCTGGGTAGAACCAGTACTGAATG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAACC-G-GGG-ATCA-AACCCGCATTCTCT
gi|53937 : GCTTCCTGGGTAGAACCAGTACTGTGTG--TTG---TTTT-ATGAGAGG-C----ATTAGGTCAATCG-G-GGG-ATCG-AACCCGCAACCTCT
gi|53938 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAACCA-G-AGG-ATCG-ATCCCACAACCTCT
gi|53919 : GCTTCCTGGGCAGAACCAGTACTGAGTG--TTG---TTTT-ATAAGAGG-C----ATCAGGTTGAGCT-G-GGG-ATTG-AATCTGCAACCTTT
gi|53893 : GCTTCCTGGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATTAGGTCAATCA-G-GGG-ATCG-AACCCACAACCTCT
gi|53960 : GCTTCCTGGGTAGATCCAGTACTGAGTG--TTG---TTTT-AT--GGGG-C----ATCGGGTCAAGCT-G-GGA-ATCG-AACCCACAACCTCT
gi|53911 : GTTTCCTAGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----TTCGGGTCGA-CTGG-GGG-ATAG-AACCCGCAACCTCT
gi|53873 : GTTTCCTGGATAAAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGACCG-G-GGG-ATCG-AACCCACAGCCTCT
gi|53930 : GCTTCTTGGGTAGAACCAGTACTGAGTG--TTT---TTTT-ATGAGAGG-C----ATCGGGTC-AATT-T-GGG-ATCG-AACTCGCAACCTCT
gi|53956 : GTTTCCTGGGTTGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATTGGGTC-AACT-G-GGGAATCG-AACCCGCAATCTCT
gi|53921 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTA-AAAAGAGG-C----ATCGGGTTGATCA-G-GGG-ATCG-AACCCACAACCTCT
gi|53953 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---CTTT-ATGAGACG-T----ATCGGGATGAGTG-G-GGG-ATCG-AACCTGCAACCTCT
gi|53957 : GCTTTCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT-ATGAGCGA-C----ATCGGGTCGAGCT-T-GGA-ATTG-AACCCACAACCTTT
gi|53910 : GTTTCCTGGGTAAAACCAGTACTGAATG--TTG---TTTT-TTGAGAGG-C----ATCAGGCCGAGAT-G-GGG-ATCG-AACCCGCAACTTTT
gi|53874 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TCG---TTAT-TTGAGAGG-C----ACTGGGTTGAGCT-G-AGG-ATCG-AATCCACAACCTCT
gi|53916 : GCTTCCTGGGTAGATCCAGTACTGAGTG--TTG---TTTT-GTGAGTGG-C----AACAGGTTGAGTT-G-GGG-ATCA-AACCTGCAACCTCT
gi|53935 : GCTTCCTGGGTAAAACCAGTACCGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCTATCT-A-GGT-ATCGAAACCCACAACCTCT
gi|53901 : GTTTCCTGGGCAGAACCAGTACTGTGTGAGTTG---TTTT--TGAGAGG-C----ATCAGATCGAGCT-G-GGG-ATCG-AACCAGCAACCTCT
gi|53931 : GCTTCCTGGGCAGAACCAATACTGAGTG--TTG---TTTT--TGAGAGG-C----ATTGGGTCAAGCT-G-TGC-ATCA-AACCCACAACCTCT
gi|53963 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTA-ATTAGAGA-C----ATCAGGTCGATCA-G-GGG-ATCA-AACTCACAACCTCT
gi|53961 : GTTTCCCGGTTAGAACCAGTACTGAGTG--GTT---TTTT--TTAGAGG-C----ATCGGGTCGAGAT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53928 : GCTTCCTGGGTAGAACCAGAACTGAGTG--TTG---TTTT-G-GAGAGGTC----AACGGGTTGAGCT-G-GGG-ATCA-AACCCGC-ACCTCT
gi|53951 : GCTTCCTGGGTAGAACCAGTACGGAGTT--TTG---GTTT-TTGGGAGG-C----ATCAGGTTGAAAT-G-GGG-ATCG-GACCTACAACCTCT
gi|53878 : GCTTCCCGGGCAAAACCAGTACTGAGTG--TTGT--TTTT-AT--GAGG-C----ATTAGGTCGAGCC-T-GGG-ACTG-AACCCACAACCTCT
gi|53954 : GCTTCCTGGGTAGAACCAGCACTGAGTG--TTG---TTTT--TCAGAAA-C----CTCGTGTCGA------GGG-ATCG-AACCCACAACCTCT
gi|53872 : GCTTCCTGGGTAGAACCAGTACTGAGTG--GTGATATTTT----AGAGG-C----ATCAGGTTGAATT-T-GGG-ATCG-AACCCACAAGCTCT
gi|53962 : GCTTCCCGGGTAGAACAAGTACTGAGGG--TTG---GTTT-TTGAAAGG-C----ATCAGGTAGAGTT-T-GGG-ATCA-AACCTGTAACCTCT
gi|53866 : GTTTCCTGGGTAGAACCAGTACTGGTTC--TTG---TTT--ATGAGAGA-C----ATTAGGTTAAGTC-T-GGG-ATCG-AACCTGCAACCTCT
gi|53940 : GTTTCCTAGGTAAGACAAGTACTAAGTG--TTG---TTTT--TGAGAGG-CCA--AT-AGGTCAAGCT-G-GGG-ATTG-AATCCACAACCTCT
gi|53945 : GTTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTC--TGAGAGGAC----AAAGAGCTGAGCA-T-AGG-ATCT-AACCTGCAACCTCT
gi|53915 : GTTTCCTGGGTAGTACCAGTACTGAGCG--TAG---TTTT--TGAGAGA-CT---ATCAGGTTAAGTT-G-GGG-ATCG-AACCTTCACTCTCT
gi|53895 : GTTTCCTTGGTAGAACCAGTACTGAAGG--TTG---TTTT--TGAGAGGCC----ATCAGGTTGGGAT-T-CGG-ATTG-AACTCTCAACCT
gi|53934 : GTTTCCTTGGTAGAACCAGTAATGACTG--TT----TTGT--TGAGAGGCC----ATCAGGTAAAGTC-T-GGG-ATCA-AACCCATAAC
gi|54135 : TTCCTGGGTAGAACCAGTACTGAGTG--TGG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|54144 : TTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGCGTCAAGCT-G-GGG-ATCG-AACCTGCAACCTCT
gi|54138 : TTCCTGGGTAAAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-CCGATATCGGGTCGAGCT-G-GGG-ATCG-AACCCGTAACCTCT
gi|54136 : TTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTAGAGTT-G-GGG-ATCA-AACCCGCAATCTCT
gi|54158 : TTCCTGGGAAGAACCAATACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGAGTCGAGCT-G-GGG-ATCG-AACTCGCAACCTCT
gi|54096 : TTCCTGGGTAGAACCAGTACTGAGGG--TTG---TTTT-ATCAGAGG-C----ATCGGGTCGACCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|54134 : tTTCCTGGGTAGAACCAATACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTAGAGCT-T-GGG-ATTG-AACCCGCAACCTCT
gi|54162 : TTCCTGGGTAGAACCACTACTGAGCG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATTG-AACCCCCAACCTCT
gi|54156 : TTCCTTGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTTGAGCT-G-GGG-ATTG-AACCTGCAACTTCT
gi|54165 : TTCATGGGTAGCACCAGTACTGAATG--TTG---TTTT-ATGAGAGG-C----GTCGGGTCGAGCT-G-GGG-ATCG-AACCCACAACTTCT
gi|54166 : TTCTTGAGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATAGGGTCGAGTT-G-GGG-ATGG-AATCCGCAACCTCT
gi|54151 : TTCCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT-ATGAGAGG-C----ATTGGGTCCAGCT-T-AGG-ATCA-AACCCGCAACCTCT
gi|54146 : TTTCTGGGTAGAACCTGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGGG-G-GGG-ATCG-AACCTGCAACCTCT
gi|54094 : TTCCTGGGTAGAACCAGTACTGAGCG--TTG---TTTT-ATGAGAGG-C----ATTTGGTTGACCA-G-GGG-ATTG-AACCCACAACCTCT
gi|54163 : tTTCCTGGATAGAGTCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATAAGGTCGAACT-T-GGA-ATTG-AACCCGCAACCTCT
gi|54159 : TTCCTGGGT-GAACCAGTACTGAGTG--TTG---TTTT--TGAGAGG-C----ATCGGATCGAGCT-T-GGA-ATCG-AAATTGCAACCTCT
gi|54147 : TTCCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT--TGAGAGG-CCA--ATC-AGTCAAACT-G-GGG-ATCA-AACCTGCAACCTCT
gi|54161 : TTCCTAGGAAGAACCAGTACTGAGTG--TTG---TTTT-TTGAGAGG-C----ATCATGTTGAGCT-G-GGG-ATCA-AACCCACAGCCACT
gi|54145 : TTCCTGGGTAAAACCAGTACTGAGTG--TTG---TTTT-TTGAGAGA-CA---ATCAGGTCTAGCT-G-GTG-ATCG-AACCCACAAC
gi|54093 : TTCCTGGGTAGAATCAGTACTGAGCG--TAG---TTTT--TGAGAAACC----ATCAGGTTAAGTT-G-GGG-ATCG-AACCTTCAGTCTCT
gi|54092 : tTTCCTGGGTAGAATCAGTACTGAGCG--TAG---TTTT--TGAGAAACC----ATCAGGTTAAGTT-G-GGG-ATCG-AACCTTCAGTCTCT
gi|54160 : tTTCCTGGGTAGAACCAGTACTGAGTT--TTG---TTTTGGTGAG-GC-C----AACAGATTAAATT-T-GGG-ATCA-AATCAGCAACCTCT
gi|54099 : TTCCTGGGCAGAACCATTGC--AGTG--TTG---TTTT--TGGACGGTC----ATCAGGTTTAGTC-T-GGG-ATTG-AACCCACAGCCTC
gi|54232 : tTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-AAAAGAGG-C----ATCGGGTCGAGTT-T-GGG-ATCG-AACCCGCAACTTCT
gi|54237 : TCCTGAGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----AACGGGTCTAGCT-T-GGG-ATCA-AACCTGCAACCTCT
gi|54235 : TCCTGACTAGAACCAGTACTGAGTG--TTA---TTTT-ATAAGAGG-C----ATCAGGTCGATCTGG-GGG-ATCG-AACCCGCAACCTCT
gi|54234 : TCCTTGGTAGAACCAGTAGTGAGTG--TAG---GTTT-TTGAGAGG-C----GTCGGGTCGAGCT-T-GGG-ATCG-AACCCACAACCTCT
gi|54278 : AGTACCAGTACTGGGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGTT-T-GGG-ATCG-AACCCCCAACCTCT
Alignments
lowQualScore : 00 111 11 2 2222 0 0 0 0
lowQualScore : .. ... .. . .... . . . .
lowQualScore : 66 111 22 8 7777 8 4 4 8
consensus : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
Reference ( family-82 ) : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53857 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-C-GGG-ATCG-AACCCGCAACCTCT
gi|53858 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-C-GGG-ATCG-AACCCACAGCCTCT
gi|53859 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53860 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53862 : GCTTCCTGGGTAGAACCAGCACTAAGTG--TTA---TTTT-ATGAGAGG-C----ATCAGGTCGAGCT-G-GGG-ATCG-AACCCACAACCTCT
gi|53863 : GTTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCTGGTCGATCG-G-GGA-ATCG-AACCCGCAACCTCT
gi|53864 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGCT-G-GGG-ATAG-AACCCGTAACCTCT
gi|53865 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTAT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53866 : GTTTCCTGGGTAGAACCAGTACTGGTTC--TTG---TTT--ATGAGAGA-C----ATTAGGTTAAGTC-T-GGG-ATCG-AACCTGCAACCTCT
gi|53868 : GCTTCCTGGGTAGAATCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACTTCT
gi|53870 : GCTTCCTGGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACTCGCAACCTCT
gi|53872 : GCTTCCTGGGTAGAACCAGTACTGAGTG--GTGATATTTT----AGAGG-C----ATCAGGTTGAATT-T-GGG-ATCG-AACCCACAAGCTCT
gi|53873 : GTTTCCTGGATAAAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGACCG-G-GGG-ATCG-AACCCACAGCCTCT
gi|53874 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TCG---TTAT-TTGAGAGG-C----ACTGGGTTGAGCT-G-AGG-ATCG-AATCCACAACCTCT
gi|53875 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATTGGGTTGACCA-G-GGG-ATCA-AACCCACAACCTCT
gi|53878 : GCTTCCCGGGCAAAACCAGTACTGAGTG--TTGT--TTTT-AT--GAGG-C----ATTAGGTCGAGCC-T-GGG-ACTG-AACCCACAACCTCT
gi|53879 : GCTTCCTGGGTAGAACAAGTACTGAGTG--TTG---CTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53880 : GCTTCCTGTGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCTGCAACCTCT
gi|53885 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCA-AACCAGCAACCTCT
gi|53887 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGATCGAGCT-G-GGG-AACG-AACCCGCAACCTCT
gi|53888 : GCTTTCTTGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53890 : GTTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCCGGTCGACCA-G-GGG-ATCG-AACCTGCAACCTCT
gi|53891 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCG-GCC-GAGGG-ATCG-AACCCGCAACCTCT
gi|53893 : GCTTCCTGGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATTAGGTCAATCA-G-GGG-ATCG-AACCCACAACCTCT
gi|53894 : GCTTCCTGTGTAGAACCAATACTGAGTG--TTG---TTTT-ATGAAAGG-C----ATCGGGTCGAGCT-T-GGG-ATCG-AACCCGTAACCTCT
gi|53895 : GTTTCCTTGGTAGAACCAGTACTGAAGG--TTG---TTTT--TGAGAGGCC----ATCAGGTTGGGAT-T-CGG-ATTG-AACTCTCAACCT
gi|53897 : GCTTCCTGGGTAGAGCCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGAT-G-GGG-ATCG-ACCCCGCAACCTCT
gi|53898 : GCTTCCTGGGTATAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCGAAACCCGCAACCTCT
gi|53900 : GTTTCCTGAGAAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-GACCCCCAACCTCT
gi|53901 : GTTTCCTGGGCAGAACCAGTACTGTGTGAGTTG---TTTT--TGAGAGG-C----ATCAGATCGAGCT-G-GGG-ATCG-AACCAGCAACCTCT
gi|53904 : GCTTCCTGGGTAGAACCAGTACTGAATG--TTG---TTTT-ATGAGAGG-C----AGCAGGTCGAACT-G-GGG-ATCG-AATCCGCAACCTCT
gi|53906 : GCTTCCTGGGTAGAACCAGTACCGAGTG--TTG---TTTA-ATGAGAGG-C----ATCGGATCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53908 : GTTTCCTGGGTAGAACCAGTACTGAATG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAACC-G-GGG-ATCA-AACCCGCATTCTCT
gi|53910 : GTTTCCTGGGTAAAACCAGTACTGAATG--TTG---TTTT-TTGAGAGG-C----ATCAGGCCGAGAT-G-GGG-ATCG-AACCCGCAACTTTT
gi|53911 : GTTTCCTAGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----TTCGGGTCGA-CTGG-GGG-ATAG-AACCCGCAACCTCT
gi|53915 : GTTTCCTGGGTAGTACCAGTACTGAGCG--TAG---TTTT--TGAGAGA-CT---ATCAGGTTAAGTT-G-GGG-ATCG-AACCTTCACTCTCT
gi|53916 : GCTTCCTGGGTAGATCCAGTACTGAGTG--TTG---TTTT-GTGAGTGG-C----AACAGGTTGAGTT-G-GGG-ATCA-AACCTGCAACCTCT
gi|53917 : GCTTCCTAGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATCG-AACCTGCAACCTCT
gi|53919 : GCTTCCTGGGCAGAACCAGTACTGAGTG--TTG---TTTT-ATAAGAGG-C----ATCAGGTTGAGCT-G-GGG-ATTG-AATCTGCAACCTTT
gi|53920 : GCTTCCTGGGTACAACCAGTACTGAGTG--TTG---ATTT-ATGAGAGG-C----ATCGGGCCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53921 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTA-AAAAGAGG-C----ATCGGGTTGATCA-G-GGG-ATCG-AACCCACAACCTCT
gi|53923 : GCTTACTGGATAGAACCAGTAATGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53924 : GCTTCCTGGGTAAAACCAGTAATGAGTG--TTG---TTTT-ATGAGAAG-C----ATCGGGTCGAGTT-G-GGG-ATCG-AACCGGCAACCTCT
gi|53925 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATTG-AACCAGCTACCTCT
gi|53927 : GCTTCCTGAATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGAT-G-GGG-ATCG-AACCTACGACCTC
gi|53928 : GCTTCCTGGGTAGAACCAGAACTGAGTG--TTG---TTTT-G-GAGAGGTC----AACGGGTTGAGCT-G-GGG-ATCA-AACCCGC-ACCTCT
gi|53929 : GCTTCCTGGGTAGAACCAGTACTGAGTA--ATG---TTTT-ATGAGAGG-C----ATCAGTTCAAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53930 : GCTTCTTGGGTAGAACCAGTACTGAGTG--TTT---TTTT-ATGAGAGG-C----ATCGGGTC-AATT-T-GGG-ATCG-AACTCGCAACCTCT
gi|53931 : GCTTCCTGGGCAGAACCAATACTGAGTG--TTG---TTTT--TGAGAGG-C----ATTGGGTCAAGCT-G-TGC-ATCA-AACCCACAACCTCT
gi|53932 : GCTTCCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT-ATGAGAGA-C----ATCGGGTCAAGCT-G-GGA-ATCA-AACCCGCAACCTCT
gi|53933 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAACCG-A-GGG-ATCG-AACCCGCAACCTTT
gi|53934 : GTTTCCTTGGTAGAACCAGTAATGACTG--TT----TTGT--TGAGAGGCC----ATCAGGTAAAGTC-T-GGG-ATCA-AACCCATAAC
gi|53935 : GCTTCCTGGGTAAAACCAGTACCGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCTATCT-A-GGT-ATCGAAACCCACAACCTCT
gi|53937 : GCTTCCTGGGTAGAACCAGTACTGTGTG--TTG---TTTT-ATGAGAGG-C----ATTAGGTCAATCG-G-GGG-ATCG-AACCCGCAACCTCT
gi|53938 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAACCA-G-AGG-ATCG-ATCCCACAACCTCT
gi|53940 : GTTTCCTAGGTAAGACAAGTACTAAGTG--TTG---TTTT--TGAGAGG-CCA--AT-AGGTCAAGCT-G-GGG-ATTG-AATCCACAACCTCT
gi|53945 : GTTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTC--TGAGAGGAC----AAAGAGCTGAGCA-T-AGG-ATCT-AACCTGCAACCTCT
gi|53946 : GCTTCCTGGGTAGAACCAGTACTGAGTA--TTG---TTTT-GTGAGAGG-T----ATCGGGTCGAAAT-G-GGA-ATCG-AACCCGCAACCTCT
gi|53947 : GCTTCCTGGGTAGAACCAGTACTGAGTA--TTG---TTTT-ATGAGAGG-C----GTCGAGTCGATCG-A-GGG-ATCG-AACCCGCAACCTCT
gi|53948 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-A-GGG-ATTT-AACCTGCAACCTCT
gi|53951 : GCTTCCTGGGTAGAACCAGTACGGAGTT--TTG---GTTT-TTGGGAGG-C----ATCAGGTTGAAAT-G-GGG-ATCG-GACCTACAACCTCT
gi|53953 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---CTTT-ATGAGACG-T----ATCGGGATGAGTG-G-GGG-ATCG-AACCTGCAACCTCT
gi|53954 : GCTTCCTGGGTAGAACCAGCACTGAGTG--TTG---TTTT--TCAGAAA-C----CTCGTGTCGA------GGG-ATCG-AACCCACAACCTCT
gi|53956 : GTTTCCTGGGTTGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATTGGGTC-AACT-G-GGGAATCG-AACCCGCAATCTCT
gi|53957 : GCTTTCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT-ATGAGCGA-C----ATCGGGTCGAGCT-T-GGA-ATTG-AACCCACAACCTTT
gi|53959 : GCTTCCCGGCAAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATCA-AACCCACAACCTCT
gi|53960 : GCTTCCTGGGTAGATCCAGTACTGAGTG--TTG---TTTT-AT--GGGG-C----ATCGGGTCAAGCT-G-GGA-ATCG-AACCCACAACCTCT
gi|53961 : GTTTCCCGGTTAGAACCAGTACTGAGTG--GTT---TTTT--TTAGAGG-C----ATCGGGTCGAGAT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53962 : GCTTCCCGGGTAGAACAAGTACTGAGGG--TTG---GTTT-TTGAAAGG-C----ATCAGGTAGAGTT-T-GGG-ATCA-AACCTGTAACCTCT
gi|53963 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTA-ATTAGAGA-C----ATCAGGTCGATCA-G-GGG-ATCA-AACTCACAACCTCT
gi|53964 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTGT-ATGAGAGG-C----ATCGGGTCATGCT-G-GTG-ATCG-AACTCGCAACCTCT
gi|53965 : GCTTCCTATATAGAACCAGTACTGAGTG--TTG---TTTA-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGA-ATCG-AACCCGCAACCTCT
gi|54092 : TTCCTGGGTAGAATCAGTACTGAGCG--TAG---TTTT--TGAGAAACC----ATCAGGTTAAGTT-G-GGG-ATCG-AACCTTCAGTCTCT
gi|54093 : tTTCCTGGGTAGAATCAGTACTGAGCG--TAG---TTTT--TGAGAAACC----ATCAGGTTAAGTT-G-GGG-ATCG-AACCTTCAGTCTCT
gi|54094 : tTTCCTGGGTAGAACCAGTACTGAGCG--TTG---TTTT-ATGAGAGG-C----ATTTGGTTGACCA-G-GGG-ATTG-AACCCACAACCTCT
gi|54096 : tTTCCTGGGTAGAACCAGTACTGAGGG--TTG---TTTT-ATCAGAGG-C----ATCGGGTCGACCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|54099 : tTTCCTGGGCAGAACCATTGC--AGTG--TTG---TTTT--TGGACGGTC----ATCAGGTTTAGTC-T-GGG-ATTG-AACCCACAGCCTC
gi|54134 : tTTCCTGGGTAGAACCAATACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTAGAGCT-T-GGG-ATTG-AACCCGCAACCTCT
gi|54135 : TTCCTGGGTAGAACCAGTACTGAGTG--TGG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|54136 : TTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTAGAGTT-G-GGG-ATCA-AACCCGCAATCTCT
gi|54138 : TTCCTGGGTAAAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-CCGATATCGGGTCGAGCT-G-GGG-ATCG-AACCCGTAACCTCT
gi|54144 : TTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGCGTCAAGCT-G-GGG-ATCG-AACCTGCAACCTCT
gi|54145 : TTCCTGGGTAAAACCAGTACTGAGTG--TTG---TTTT-TTGAGAGA-CA---ATCAGGTCTAGCT-G-GTG-ATCG-AACCCACAAC
gi|54146 : TTTCTGGGTAGAACCTGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGGG-G-GGG-ATCG-AACCTGCAACCTCT
gi|54147 : TTCCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT--TGAGAGG-CCA--ATC-AGTCAAACT-G-GGG-ATCA-AACCTGCAACCTCT
gi|54151 : TTCCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT-ATGAGAGG-C----ATTGGGTCCAGCT-T-AGG-ATCA-AACCCGCAACCTCT
gi|54156 : TTCCTTGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTTGAGCT-G-GGG-ATTG-AACCTGCAACTTCT
gi|54158 : TTCCTGGGAAGAACCAATACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGAGTCGAGCT-G-GGG-ATCG-AACTCGCAACCTCT
gi|54159 : TTCCTGGGT-GAACCAGTACTGAGTG--TTG---TTTT--TGAGAGG-C----ATCGGATCGAGCT-T-GGA-ATCG-AAATTGCAACCTCT
gi|54160 : TTCCTGGGTAGAACCAGTACTGAGTT--TTG---TTTTGGTGAG-GC-C----AACAGATTAAATT-T-GGG-ATCA-AATCAGCAACCTCT
gi|54161 : TTCCTAGGAAGAACCAGTACTGAGTG--TTG---TTTT-TTGAGAGG-C----ATCATGTTGAGCT-G-GGG-ATCA-AACCCACAGCCACT
gi|54162 : TTCCTGGGTAGAACCACTACTGAGCG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATTG-AACCCCCAACCTCT
gi|54163 : TTCCTGGATAGAGTCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATAAGGTCGAACT-T-GGA-ATTG-AACCCGCAACCTCT
gi|54165 : TTCATGGGTAGCACCAGTACTGAATG--TTG---TTTT-ATGAGAGG-C----GTCGGGTCGAGCT-G-GGG-ATCG-AACCCACAACTTCT
gi|54166 : TTCTTGAGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATAGGGTCGAGTT-G-GGG-ATGG-AATCCGCAACCTCT
gi|54232 : TCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-AAAAGAGG-C----ATCGGGTCGAGTT-T-GGG-ATCG-AACCCGCAACTTCT
gi|54234 : TCCTTGGTAGAACCAGTAGTGAGTG--TAG---GTTT-TTGAGAGG-C----GTCGGGTCGAGCT-T-GGG-ATCG-AACCCACAACCTCT
gi|54235 : TCCTGACTAGAACCAGTACTGAGTG--TTA---TTTT-ATAAGAGG-C----ATCAGGTCGATCTGG-GGG-ATCG-AACCCGCAACCTCT
gi|54237 : TCCTGAGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----AACGGGTCTAGCT-T-GGG-ATCA-AACCTGCAACCTCT
gi|54278 : AGTACCAGTACTGGGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGTT-T-GGG-ATCG-AACCCCCAACCTCT
Alignments
lowQualScore : 00 111 11 2 2222 0 0 0 0
lowQualScore : .. ... .. . .... . . . .
lowQualScore : 66 111 22 8 7777 8 4 4 8
consensus : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
Reference ( family-82 ) : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53857 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-C-GGG-ATCG-AACCCGCAACCTCT
gi|53858 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-C-GGG-ATCG-AACCCACAGCCTCT
gi|53859 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53860 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53862 : GCTTCCTGGGTAGAACCAGCACTAAGTG--TTA---TTTT-ATGAGAGG-C----ATCAGGTCGAGCT-G-GGG-ATCG-AACCCACAACCTCT
gi|53863 : GTTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCTGGTCGATCG-G-GGA-ATCG-AACCCGCAACCTCT
gi|53864 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGCT-G-GGG-ATAG-AACCCGTAACCTCT
gi|53865 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTAT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53866 : GTTTCCTGGGTAGAACCAGTACTGGTTC--TTG---TTT--ATGAGAGA-C----ATTAGGTTAAGTC-T-GGG-ATCG-AACCTGCAACCTCT
gi|53868 : GCTTCCTGGGTAGAATCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACTTCT
gi|53870 : GCTTCCTGGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACTCGCAACCTCT
gi|53872 : GCTTCCTGGGTAGAACCAGTACTGAGTG--GTGATATTTT----AGAGG-C----ATCAGGTTGAATT-T-GGG-ATCG-AACCCACAAGCTCT
gi|53873 : GTTTCCTGGATAAAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGACCG-G-GGG-ATCG-AACCCACAGCCTCT
gi|53874 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TCG---TTAT-TTGAGAGG-C----ACTGGGTTGAGCT-G-AGG-ATCG-AATCCACAACCTCT
gi|53875 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATTGGGTTGACCA-G-GGG-ATCA-AACCCACAACCTCT
gi|53878 : GCTTCCCGGGCAAAACCAGTACTGAGTG--TTGT--TTTT-AT--GAGG-C----ATTAGGTCGAGCC-T-GGG-ACTG-AACCCACAACCTCT
gi|53879 : GCTTCCTGGGTAGAACAAGTACTGAGTG--TTG---CTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53880 : GCTTCCTGTGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCTGCAACCTCT
gi|53885 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCA-AACCAGCAACCTCT
gi|53887 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGATCGAGCT-G-GGG-AACG-AACCCGCAACCTCT
gi|53888 : GCTTTCTTGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53890 : GTTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCCGGTCGACCA-G-GGG-ATCG-AACCTGCAACCTCT
gi|53891 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCG-GCC-GAGGG-ATCG-AACCCGCAACCTCT
gi|53893 : GCTTCCTGGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATTAGGTCAATCA-G-GGG-ATCG-AACCCACAACCTCT
gi|53894 : GCTTCCTGTGTAGAACCAATACTGAGTG--TTG---TTTT-ATGAAAGG-C----ATCGGGTCGAGCT-T-GGG-ATCG-AACCCGTAACCTCT
gi|53895 : GTTTCCTTGGTAGAACCAGTACTGAAGG--TTG---TTTT--TGAGAGGCC----ATCAGGTTGGGAT-T-CGG-ATTG-AACTCTCAACCT
gi|53897 : GCTTCCTGGGTAGAGCCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGAT-G-GGG-ATCG-ACCCCGCAACCTCT
gi|53898 : GCTTCCTGGGTATAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCGAAACCCGCAACCTCT
gi|53900 : GTTTCCTGAGAAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-GACCCCCAACCTCT
gi|53901 : GTTTCCTGGGCAGAACCAGTACTGTGTGAGTTG---TTTT--TGAGAGG-C----ATCAGATCGAGCT-G-GGG-ATCG-AACCAGCAACCTCT
gi|53904 : GCTTCCTGGGTAGAACCAGTACTGAATG--TTG---TTTT-ATGAGAGG-C----AGCAGGTCGAACT-G-GGG-ATCG-AATCCGCAACCTCT
gi|53906 : GCTTCCTGGGTAGAACCAGTACCGAGTG--TTG---TTTA-ATGAGAGG-C----ATCGGATCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53908 : GTTTCCTGGGTAGAACCAGTACTGAATG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAACC-G-GGG-ATCA-AACCCGCATTCTCT
gi|53910 : GTTTCCTGGGTAAAACCAGTACTGAATG--TTG---TTTT-TTGAGAGG-C----ATCAGGCCGAGAT-G-GGG-ATCG-AACCCGCAACTTTT
gi|53911 : GTTTCCTAGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----TTCGGGTCGA-CTGG-GGG-ATAG-AACCCGCAACCTCT
gi|53915 : GTTTCCTGGGTAGTACCAGTACTGAGCG--TAG---TTTT--TGAGAGA-CT---ATCAGGTTAAGTT-G-GGG-ATCG-AACCTTCACTCTCT
gi|53916 : GCTTCCTGGGTAGATCCAGTACTGAGTG--TTG---TTTT-GTGAGTGG-C----AACAGGTTGAGTT-G-GGG-ATCA-AACCTGCAACCTCT
gi|53917 : GCTTCCTAGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATCG-AACCTGCAACCTCT
gi|53919 : GCTTCCTGGGCAGAACCAGTACTGAGTG--TTG---TTTT-ATAAGAGG-C----ATCAGGTTGAGCT-G-GGG-ATTG-AATCTGCAACCTTT
gi|53920 : GCTTCCTGGGTACAACCAGTACTGAGTG--TTG---ATTT-ATGAGAGG-C----ATCGGGCCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53921 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTA-AAAAGAGG-C----ATCGGGTTGATCA-G-GGG-ATCG-AACCCACAACCTCT
gi|53923 : GCTTACTGGATAGAACCAGTAATGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53924 : GCTTCCTGGGTAAAACCAGTAATGAGTG--TTG---TTTT-ATGAGAAG-C----ATCGGGTCGAGTT-G-GGG-ATCG-AACCGGCAACCTCT
gi|53925 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATTG-AACCAGCTACCTCT
gi|53927 : GCTTCCTGAATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGAT-G-GGG-ATCG-AACCTACGACCTC
gi|53928 : GCTTCCTGGGTAGAACCAGAACTGAGTG--TTG---TTTT-G-GAGAGGTC----AACGGGTTGAGCT-G-GGG-ATCA-AACCCGC-ACCTCT
gi|53929 : GCTTCCTGGGTAGAACCAGTACTGAGTA--ATG---TTTT-ATGAGAGG-C----ATCAGTTCAAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53930 : GCTTCTTGGGTAGAACCAGTACTGAGTG--TTT---TTTT-ATGAGAGG-C----ATCGGGTC-AATT-T-GGG-ATCG-AACTCGCAACCTCT
gi|53931 : GCTTCCTGGGCAGAACCAATACTGAGTG--TTG---TTTT--TGAGAGG-C----ATTGGGTCAAGCT-G-TGC-ATCA-AACCCACAACCTCT
gi|53932 : GCTTCCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT-ATGAGAGA-C----ATCGGGTCAAGCT-G-GGA-ATCA-AACCCGCAACCTCT
gi|53933 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAACCG-A-GGG-ATCG-AACCCGCAACCTTT
gi|53934 : GTTTCCTTGGTAGAACCAGTAATGACTG--TT----TTGT--TGAGAGGCC----ATCAGGTAAAGTC-T-GGG-ATCA-AACCCATAAC
gi|53935 : GCTTCCTGGGTAAAACCAGTACCGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCTATCT-A-GGT-ATCGAAACCCACAACCTCT
gi|53937 : GCTTCCTGGGTAGAACCAGTACTGTGTG--TTG---TTTT-ATGAGAGG-C----ATTAGGTCAATCG-G-GGG-ATCG-AACCCGCAACCTCT
gi|53938 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAACCA-G-AGG-ATCG-ATCCCACAACCTCT
gi|53940 : GTTTCCTAGGTAAGACAAGTACTAAGTG--TTG---TTTT--TGAGAGG-CCA--AT-AGGTCAAGCT-G-GGG-ATTG-AATCCACAACCTCT
gi|53945 : GTTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTC--TGAGAGGAC----AAAGAGCTGAGCA-T-AGG-ATCT-AACCTGCAACCTCT
gi|53946 : GCTTCCTGGGTAGAACCAGTACTGAGTA--TTG---TTTT-GTGAGAGG-T----ATCGGGTCGAAAT-G-GGA-ATCG-AACCCGCAACCTCT
gi|53947 : GCTTCCTGGGTAGAACCAGTACTGAGTA--TTG---TTTT-ATGAGAGG-C----GTCGAGTCGATCG-A-GGG-ATCG-AACCCGCAACCTCT
gi|53948 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-A-GGG-ATTT-AACCTGCAACCTCT
gi|53951 : GCTTCCTGGGTAGAACCAGTACGGAGTT--TTG---GTTT-TTGGGAGG-C----ATCAGGTTGAAAT-G-GGG-ATCG-GACCTACAACCTCT
gi|53953 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---CTTT-ATGAGACG-T----ATCGGGATGAGTG-G-GGG-ATCG-AACCTGCAACCTCT
gi|53954 : GCTTCCTGGGTAGAACCAGCACTGAGTG--TTG---TTTT--TCAGAAA-C----CTCGTGTCGA------GGG-ATCG-AACCCACAACCTCT
gi|53956 : GTTTCCTGGGTTGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATTGGGTC-AACT-G-GGGAATCG-AACCCGCAATCTCT
gi|53957 : GCTTTCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT-ATGAGCGA-C----ATCGGGTCGAGCT-T-GGA-ATTG-AACCCACAACCTTT
gi|53959 : GCTTCCCGGCAAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATCA-AACCCACAACCTCT
gi|53960 : GCTTCCTGGGTAGATCCAGTACTGAGTG--TTG---TTTT-AT--GGGG-C----ATCGGGTCAAGCT-G-GGA-ATCG-AACCCACAACCTCT
gi|53961 : GTTTCCCGGTTAGAACCAGTACTGAGTG--GTT---TTTT--TTAGAGG-C----ATCGGGTCGAGAT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53962 : GCTTCCCGGGTAGAACAAGTACTGAGGG--TTG---GTTT-TTGAAAGG-C----ATCAGGTAGAGTT-T-GGG-ATCA-AACCTGTAACCTCT
gi|53963 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTA-ATTAGAGA-C----ATCAGGTCGATCA-G-GGG-ATCA-AACTCACAACCTCT
gi|53964 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTGT-ATGAGAGG-C----ATCGGGTCATGCT-G-GTG-ATCG-AACTCGCAACCTCT
gi|53965 : GCTTCCTATATAGAACCAGTACTGAGTG--TTG---TTTA-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGA-ATCG-AACCCGCAACCTCT
gi|54092 : TTCCTGGGTAGAATCAGTACTGAGCG--TAG---TTTT--TGAGAAACC----ATCAGGTTAAGTT-G-GGG-ATCG-AACCTTCAGTCTCT
gi|54093 : tTTCCTGGGTAGAATCAGTACTGAGCG--TAG---TTTT--TGAGAAACC----ATCAGGTTAAGTT-G-GGG-ATCG-AACCTTCAGTCTCT
gi|54094 : tTTCCTGGGTAGAACCAGTACTGAGCG--TTG---TTTT-ATGAGAGG-C----ATTTGGTTGACCA-G-GGG-ATTG-AACCCACAACCTCT
gi|54096 : tTTCCTGGGTAGAACCAGTACTGAGGG--TTG---TTTT-ATCAGAGG-C----ATCGGGTCGACCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|54099 : tTTCCTGGGCAGAACCATTGC--AGTG--TTG---TTTT--TGGACGGTC----ATCAGGTTTAGTC-T-GGG-ATTG-AACCCACAGCCTC
gi|54134 : tTTCCTGGGTAGAACCAATACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTAGAGCT-T-GGG-ATTG-AACCCGCAACCTCT
gi|54135 : TTCCTGGGTAGAACCAGTACTGAGTG--TGG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|54136 : TTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTAGAGTT-G-GGG-ATCA-AACCCGCAATCTCT
gi|54138 : TTCCTGGGTAAAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-CCGATATCGGGTCGAGCT-G-GGG-ATCG-AACCCGTAACCTCT
gi|54144 : TTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGCGTCAAGCT-G-GGG-ATCG-AACCTGCAACCTCT
gi|54145 : TTCCTGGGTAAAACCAGTACTGAGTG--TTG---TTTT-TTGAGAGA-CA---ATCAGGTCTAGCT-G-GTG-ATCG-AACCCACAAC
gi|54146 : TTTCTGGGTAGAACCTGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGGG-G-GGG-ATCG-AACCTGCAACCTCT
gi|54147 : TTCCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT--TGAGAGG-CCA--ATC-AGTCAAACT-G-GGG-ATCA-AACCTGCAACCTCT
gi|54151 : TTCCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT-ATGAGAGG-C----ATTGGGTCCAGCT-T-AGG-ATCA-AACCCGCAACCTCT
gi|54156 : TTCCTTGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTTGAGCT-G-GGG-ATTG-AACCTGCAACTTCT
gi|54158 : TTCCTGGGAAGAACCAATACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGAGTCGAGCT-G-GGG-ATCG-AACTCGCAACCTCT
gi|54159 : TTCCTGGGT-GAACCAGTACTGAGTG--TTG---TTTT--TGAGAGG-C----ATCGGATCGAGCT-T-GGA-ATCG-AAATTGCAACCTCT
gi|54160 : TTCCTGGGTAGAACCAGTACTGAGTT--TTG---TTTTGGTGAG-GC-C----AACAGATTAAATT-T-GGG-ATCA-AATCAGCAACCTCT
gi|54161 : TTCCTAGGAAGAACCAGTACTGAGTG--TTG---TTTT-TTGAGAGG-C----ATCATGTTGAGCT-G-GGG-ATCA-AACCCACAGCCACT
gi|54162 : TTCCTGGGTAGAACCACTACTGAGCG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATTG-AACCCCCAACCTCT
gi|54163 : TTCCTGGATAGAGTCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATAAGGTCGAACT-T-GGA-ATTG-AACCCGCAACCTCT
gi|54165 : TTCATGGGTAGCACCAGTACTGAATG--TTG---TTTT-ATGAGAGG-C----GTCGGGTCGAGCT-G-GGG-ATCG-AACCCACAACTTCT
gi|54166 : TTCTTGAGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATAGGGTCGAGTT-G-GGG-ATGG-AATCCGCAACCTCT
gi|54232 : TCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-AAAAGAGG-C----ATCGGGTCGAGTT-T-GGG-ATCG-AACCCGCAACTTCT
gi|54234 : TCCTTGGTAGAACCAGTAGTGAGTG--TAG---GTTT-TTGAGAGG-C----GTCGGGTCGAGCT-T-GGG-ATCG-AACCCACAACCTCT
gi|54235 : TCCTGACTAGAACCAGTACTGAGTG--TTA---TTTT-ATAAGAGG-C----ATCAGGTCGATCTGG-GGG-ATCG-AACCCGCAACCTCT
gi|54237 : TCCTGAGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----AACGGGTCTAGCT-T-GGG-ATCA-AACCTGCAACCTCT
gi|54278 : AGTACCAGTACTGGGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGTT-T-GGG-ATCG-AACCCCCAACCTCT
blockSeqs : ATA GG C CGAT
blockSeqs : T A T CA
blockSeqs : . A C CA
blockSeqs : . A A T
blockSeqs : . A C A
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blockSeqs : . A . .
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blockSeqCons :
originalCons : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
finalCons : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
Alignments
lowQualScore : 00 111 11 2 2222 0 0 0 0
lowQualScore : .. ... .. . .... . . . .
lowQualScore : 66 111 22 8 7777 8 4 4 8
consensus : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
Reference ( family-82 ) : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53857 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-C-GGG-ATCG-AACCCGCAACCTCT
gi|53858 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-C-GGG-ATCG-AACCCACAGCCTCT
gi|53859 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53860 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53862 : GCTTCCTGGGTAGAACCAGCACTAAGTG--TTA---TTTT-ATGAGAGG-C----ATCAGGTCGAGCT-G-GGG-ATCG-AACCCACAACCTCT
gi|53863 : GTTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCTGGTCGATCG-G-GGA-ATCG-AACCCGCAACCTCT
gi|53864 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGCT-G-GGG-ATAG-AACCCGTAACCTCT
gi|53865 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTAT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53866 : GTTTCCTGGGTAGAACCAGTACTGGTTC--TTG---TTT--ATGAGAGA-C----ATTAGGTTAAGTC-T-GGG-ATCG-AACCTGCAACCTCT
gi|53868 : GCTTCCTGGGTAGAATCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACTTCT
gi|53870 : GCTTCCTGGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACTCGCAACCTCT
gi|53872 : GCTTCCTGGGTAGAACCAGTACTGAGTG--GTGATATTTT----AGAGG-C----ATCAGGTTGAATT-T-GGG-ATCG-AACCCACAAGCTCT
gi|53873 : GTTTCCTGGATAAAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGACCG-G-GGG-ATCG-AACCCACAGCCTCT
gi|53874 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TCG---TTAT-TTGAGAGG-C----ACTGGGTTGAGCT-G-AGG-ATCG-AATCCACAACCTCT
gi|53875 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATTGGGTTGACCA-G-GGG-ATCA-AACCCACAACCTCT
gi|53878 : GCTTCCCGGGCAAAACCAGTACTGAGTG--TTGT--TTTT-AT--GAGG-C----ATTAGGTCGAGCC-T-GGG-ACTG-AACCCACAACCTCT
gi|53879 : GCTTCCTGGGTAGAACAAGTACTGAGTG--TTG---CTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53880 : GCTTCCTGTGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCTGCAACCTCT
gi|53885 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCA-AACCAGCAACCTCT
gi|53887 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGATCGAGCT-G-GGG-AACG-AACCCGCAACCTCT
gi|53888 : GCTTTCTTGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53890 : GTTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCCGGTCGACCA-G-GGG-ATCG-AACCTGCAACCTCT
gi|53891 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCG-GCC-GAGGG-ATCG-AACCCGCAACCTCT
gi|53893 : GCTTCCTGGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATTAGGTCAATCA-G-GGG-ATCG-AACCCACAACCTCT
gi|53894 : GCTTCCTGTGTAGAACCAATACTGAGTG--TTG---TTTT-ATGAAAGG-C----ATCGGGTCGAGCT-T-GGG-ATCG-AACCCGTAACCTCT
gi|53895 : GTTTCCTTGGTAGAACCAGTACTGAAGG--TTG---TTTT--TGAGAGGCC----ATCAGGTTGGGAT-T-CGG-ATTG-AACTCTCAACCT
gi|53897 : GCTTCCTGGGTAGAGCCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGAT-G-GGG-ATCG-ACCCCGCAACCTCT
gi|53898 : GCTTCCTGGGTATAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCGAAACCCGCAACCTCT
gi|53900 : GTTTCCTGAGAAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-GACCCCCAACCTCT
gi|53901 : GTTTCCTGGGCAGAACCAGTACTGTGTGAGTTG---TTTT--TGAGAGG-C----ATCAGATCGAGCT-G-GGG-ATCG-AACCAGCAACCTCT
gi|53904 : GCTTCCTGGGTAGAACCAGTACTGAATG--TTG---TTTT-ATGAGAGG-C----AGCAGGTCGAACT-G-GGG-ATCG-AATCCGCAACCTCT
gi|53906 : GCTTCCTGGGTAGAACCAGTACCGAGTG--TTG---TTTA-ATGAGAGG-C----ATCGGATCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53908 : GTTTCCTGGGTAGAACCAGTACTGAATG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAACC-G-GGG-ATCA-AACCCGCATTCTCT
gi|53910 : GTTTCCTGGGTAAAACCAGTACTGAATG--TTG---TTTT-TTGAGAGG-C----ATCAGGCCGAGAT-G-GGG-ATCG-AACCCGCAACTTTT
gi|53911 : GTTTCCTAGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----TTCGGGTCGA-CTGG-GGG-ATAG-AACCCGCAACCTCT
gi|53915 : GTTTCCTGGGTAGTACCAGTACTGAGCG--TAG---TTTT--TGAGAGA-CT---ATCAGGTTAAGTT-G-GGG-ATCG-AACCTTCACTCTCT
gi|53916 : GCTTCCTGGGTAGATCCAGTACTGAGTG--TTG---TTTT-GTGAGTGG-C----AACAGGTTGAGTT-G-GGG-ATCA-AACCTGCAACCTCT
gi|53917 : GCTTCCTAGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATCG-AACCTGCAACCTCT
gi|53919 : GCTTCCTGGGCAGAACCAGTACTGAGTG--TTG---TTTT-ATAAGAGG-C----ATCAGGTTGAGCT-G-GGG-ATTG-AATCTGCAACCTTT
gi|53920 : GCTTCCTGGGTACAACCAGTACTGAGTG--TTG---ATTT-ATGAGAGG-C----ATCGGGCCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53921 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTA-AAAAGAGG-C----ATCGGGTTGATCA-G-GGG-ATCG-AACCCACAACCTCT
gi|53923 : GCTTACTGGATAGAACCAGTAATGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53924 : GCTTCCTGGGTAAAACCAGTAATGAGTG--TTG---TTTT-ATGAGAAG-C----ATCGGGTCGAGTT-G-GGG-ATCG-AACCGGCAACCTCT
gi|53925 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATTG-AACCAGCTACCTCT
gi|53927 : GCTTCCTGAATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCGAGAT-G-GGG-ATCG-AACCTACGACCTC
gi|53928 : GCTTCCTGGGTAGAACCAGAACTGAGTG--TTG---TTTT-G-GAGAGGTC----AACGGGTTGAGCT-G-GGG-ATCA-AACCCGC-ACCTCT
gi|53929 : GCTTCCTGGGTAGAACCAGTACTGAGTA--ATG---TTTT-ATGAGAGG-C----ATCAGTTCAAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53930 : GCTTCTTGGGTAGAACCAGTACTGAGTG--TTT---TTTT-ATGAGAGG-C----ATCGGGTC-AATT-T-GGG-ATCG-AACTCGCAACCTCT
gi|53931 : GCTTCCTGGGCAGAACCAATACTGAGTG--TTG---TTTT--TGAGAGG-C----ATTGGGTCAAGCT-G-TGC-ATCA-AACCCACAACCTCT
gi|53932 : GCTTCCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT-ATGAGAGA-C----ATCGGGTCAAGCT-G-GGA-ATCA-AACCCGCAACCTCT
gi|53933 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAACCG-A-GGG-ATCG-AACCCGCAACCTTT
gi|53934 : GTTTCCTTGGTAGAACCAGTAATGACTG--TT----TTGT--TGAGAGGCC----ATCAGGTAAAGTC-T-GGG-ATCA-AACCCATAAC
gi|53935 : GCTTCCTGGGTAAAACCAGTACCGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCTATCT-A-GGT-ATCGAAACCCACAACCTCT
gi|53937 : GCTTCCTGGGTAGAACCAGTACTGTGTG--TTG---TTTT-ATGAGAGG-C----ATTAGGTCAATCG-G-GGG-ATCG-AACCCGCAACCTCT
gi|53938 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAACCA-G-AGG-ATCG-ATCCCACAACCTCT
gi|53940 : GTTTCCTAGGTAAGACAAGTACTAAGTG--TTG---TTTT--TGAGAGG-CCA--AT-AGGTCAAGCT-G-GGG-ATTG-AATCCACAACCTCT
gi|53945 : GTTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTC--TGAGAGGAC----AAAGAGCTGAGCA-T-AGG-ATCT-AACCTGCAACCTCT
gi|53946 : GCTTCCTGGGTAGAACCAGTACTGAGTA--TTG---TTTT-GTGAGAGG-T----ATCGGGTCGAAAT-G-GGA-ATCG-AACCCGCAACCTCT
gi|53947 : GCTTCCTGGGTAGAACCAGTACTGAGTA--TTG---TTTT-ATGAGAGG-C----GTCGAGTCGATCG-A-GGG-ATCG-AACCCGCAACCTCT
gi|53948 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-A-GGG-ATTT-AACCTGCAACCTCT
gi|53951 : GCTTCCTGGGTAGAACCAGTACGGAGTT--TTG---GTTT-TTGGGAGG-C----ATCAGGTTGAAAT-G-GGG-ATCG-GACCTACAACCTCT
gi|53953 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---CTTT-ATGAGACG-T----ATCGGGATGAGTG-G-GGG-ATCG-AACCTGCAACCTCT
gi|53954 : GCTTCCTGGGTAGAACCAGCACTGAGTG--TTG---TTTT--TCAGAAA-C----CTCGTGTCGA------GGG-ATCG-AACCCACAACCTCT
gi|53956 : GTTTCCTGGGTTGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATTGGGTC-AACT-G-GGGAATCG-AACCCGCAATCTCT
gi|53957 : GCTTTCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT-ATGAGCGA-C----ATCGGGTCGAGCT-T-GGA-ATTG-AACCCACAACCTTT
gi|53959 : GCTTCCCGGCAAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATCA-AACCCACAACCTCT
gi|53960 : GCTTCCTGGGTAGATCCAGTACTGAGTG--TTG---TTTT-AT--GGGG-C----ATCGGGTCAAGCT-G-GGA-ATCG-AACCCACAACCTCT
gi|53961 : GTTTCCCGGTTAGAACCAGTACTGAGTG--GTT---TTTT--TTAGAGG-C----ATCGGGTCGAGAT-G-GGG-ATCG-AACCCGCAACCTCT
gi|53962 : GCTTCCCGGGTAGAACAAGTACTGAGGG--TTG---GTTT-TTGAAAGG-C----ATCAGGTAGAGTT-T-GGG-ATCA-AACCTGTAACCTCT
gi|53963 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTA-ATTAGAGA-C----ATCAGGTCGATCA-G-GGG-ATCA-AACTCACAACCTCT
gi|53964 : GCTTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTGT-ATGAGAGG-C----ATCGGGTCATGCT-G-GTG-ATCG-AACTCGCAACCTCT
gi|53965 : GCTTCCTATATAGAACCAGTACTGAGTG--TTG---TTTA-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGA-ATCG-AACCCGCAACCTCT
gi|54092 : TTCCTGGGTAGAATCAGTACTGAGCG--TAG---TTTT--TGAGAAACC----ATCAGGTTAAGTT-G-GGG-ATCG-AACCTTCAGTCTCT
gi|54093 : tTTCCTGGGTAGAATCAGTACTGAGCG--TAG---TTTT--TGAGAAACC----ATCAGGTTAAGTT-G-GGG-ATCG-AACCTTCAGTCTCT
gi|54094 : tTTCCTGGGTAGAACCAGTACTGAGCG--TTG---TTTT-ATGAGAGG-C----ATTTGGTTGACCA-G-GGG-ATTG-AACCCACAACCTCT
gi|54096 : tTTCCTGGGTAGAACCAGTACTGAGGG--TTG---TTTT-ATCAGAGG-C----ATCGGGTCGACCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|54099 : tTTCCTGGGCAGAACCATTGC--AGTG--TTG---TTTT--TGGACGGTC----ATCAGGTTTAGTC-T-GGG-ATTG-AACCCACAGCCTC
gi|54134 : tTTCCTGGGTAGAACCAATACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTAGAGCT-T-GGG-ATTG-AACCCGCAACCTCT
gi|54135 : TTCCTGGGTAGAACCAGTACTGAGTG--TGG---TTTT-ATGAGAGG-C----ATCGGGTCGAGCT-G-GGG-ATCG-AACCCGCAACCTCT
gi|54136 : TTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTAGAGTT-G-GGG-ATCA-AACCCGCAATCTCT
gi|54138 : TTCCTGGGTAAAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-CCGATATCGGGTCGAGCT-G-GGG-ATCG-AACCCGTAACCTCT
gi|54144 : TTCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGCGTCAAGCT-G-GGG-ATCG-AACCTGCAACCTCT
gi|54145 : TTCCTGGGTAAAACCAGTACTGAGTG--TTG---TTTT-TTGAGAGA-CA---ATCAGGTCTAGCT-G-GTG-ATCG-AACCCACAAC
gi|54146 : TTTCTGGGTAGAACCTGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGGG-G-GGG-ATCG-AACCTGCAACCTCT
gi|54147 : TTCCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT--TGAGAGG-CCA--ATC-AGTCAAACT-G-GGG-ATCA-AACCTGCAACCTCT
gi|54151 : TTCCTGGGTAGAACCAGTACTAAGTG--TTG---TTTT-ATGAGAGG-C----ATTGGGTCCAGCT-T-AGG-ATCA-AACCCGCAACCTCT
gi|54156 : TTCCTTGATAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGGGTTGAGCT-G-GGG-ATTG-AACCTGCAACTTCT
gi|54158 : TTCCTGGGAAGAACCAATACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATCGAGTCGAGCT-G-GGG-ATCG-AACTCGCAACCTCT
gi|54159 : TTCCTGGGT-GAACCAGTACTGAGTG--TTG---TTTT--TGAGAGG-C----ATCGGATCGAGCT-T-GGA-ATCG-AAATTGCAACCTCT
gi|54160 : TTCCTGGGTAGAACCAGTACTGAGTT--TTG---TTTTGGTGAG-GC-C----AACAGATTAAATT-T-GGG-ATCA-AATCAGCAACCTCT
gi|54161 : TTCCTAGGAAGAACCAGTACTGAGTG--TTG---TTTT-TTGAGAGG-C----ATCATGTTGAGCT-G-GGG-ATCA-AACCCACAGCCACT
gi|54162 : TTCCTGGGTAGAACCACTACTGAGCG--TTG---TTTT-ATGAGAGG-C----ATCGGGTCAAGCT-G-GGG-ATTG-AACCCCCAACCTCT
gi|54163 : TTCCTGGATAGAGTCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATAAGGTCGAACT-T-GGA-ATTG-AACCCGCAACCTCT
gi|54165 : TTCATGGGTAGCACCAGTACTGAATG--TTG---TTTT-ATGAGAGG-C----GTCGGGTCGAGCT-G-GGG-ATCG-AACCCACAACTTCT
gi|54166 : TTCTTGAGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----ATAGGGTCGAGTT-G-GGG-ATGG-AATCCGCAACCTCT
gi|54232 : TCCTGGGTAGAACCAGTACTGAGTG--TTG---TTTT-AAAAGAGG-C----ATCGGGTCGAGTT-T-GGG-ATCG-AACCCGCAACTTCT
gi|54234 : TCCTTGGTAGAACCAGTAGTGAGTG--TAG---GTTT-TTGAGAGG-C----GTCGGGTCGAGCT-T-GGG-ATCG-AACCCACAACCTCT
gi|54235 : TCCTGACTAGAACCAGTACTGAGTG--TTA---TTTT-ATAAGAGG-C----ATCAGGTCGATCTGG-GGG-ATCG-AACCCGCAACCTCT
gi|54237 : TCCTGAGTAGAACCAGTACTGAGTG--TTG---TTTT-ATGAGAGG-C----AACGGGTCTAGCT-T-GGG-ATCA-AACCTGCAACCTCT
gi|54278 : AGTACCAGTACTGGGTG--TTG---TTTT-ATGAGAGG-C----ATCAGGTCGAGTT-T-GGG-ATCG-AACCCCCAACCTCT