lowQualScore : 2 1 1 1111 222 1 111111 1
lowQualScore : 0 2 4 4 66666 8888 2 33 2 66 666 4 5 777777 33 444 2 222222 5555 444 5 33 444 5 66 0 3
lowQualScore : . . . . ..... .... . .. . .. ... . . ...... .. ... . ...... .... ... . .. ... . .. . .
lowQualScore : 0 9 9 4 22222 9999 7 77 5 33 666 9 2 222222 44 444 5 333333 7777 777 3 44 111 5 99 2 2
consensus : TTTCATCTTTTCATCTTT-CGGGTTTGTATGAGGGATCATGCACATGTACCAAAATAT-----TTGCT---CTGT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGGTGTCAACAATCGAAGTTTTTTT-CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----G---TC-AACACATTCCAGCTATT--GATTTTACAC---AAAGCAAATTGAATCTTAGAACATATACAAGTCTCCATTTTATGCAT
Reference ( gi|130839 ) : TTTCATCTTTTCAT-TTT-CGGGTTTGTATGAGGGATCTTGCACATGTACCAACATAT-----TTGCT---ATGT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACAGTGTCAACAATCGAAGTTTTTTTTCGATCAAGTTCATTTGGGCTAGTGAAAATAGAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----G---TC-AACACATTCCAGCTATT--GATTTTACAC---ATAGCAAATTGAATCTTAAAACATATACAAGTCTCTATTTTATGCAT
gi|130840 : TTTCATCTTTTCAT-TTT-CGGGTTTGTATGAGGAATCTTGCACATGTAACAAAATAT-----TTGCT---CTGT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACAGTGTTTACAATCGAAGTTTTTTT--GATCAGGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGA-TCTGTCGGACCTACA------GCC----G---TC-AACACATTCCAGCTATT--GATTTTACAC---CAAGGAAATTGAATCTTGGAACATATACAAGTCTTCATTTTATGCAT
gi|130844 : TTTCATTTTTTCAT-TTT-CGGGTTTGTATGAGGGATCATGCACATGTACCAAATTAT-----TTACT---CTGT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGGTGCCGGCAATCAAAG--TTTTTTCGATCAAGTTCATTTGGGCTAGTGAAATTAGAC------T--G---AGAT-TCTGTCGGACCTACA------GCC----G---TC-AACACATTCCAGCTATT--GATTTTACAC---AAAGCAAA-TGAAACTCAGAACATATACAAGTCTCCATTATATACAT
gi|130845 : TTTCATCTTTTCAT-TTT-TGGTTTTGTATGAGTGATTATCCCCATGTACCAAATTAT-----TTGCT---CTGT-ATT--ATTTGTCTCTCAGCATATTGA-AGAAACTGTGTCAACAATAGAAGTTTT---TCGATCAAGTTCACTTGGGCTAGTGAAACTAAAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----G---TC-AACACATTCCAGCTATT--GATTTTACAC---AAAGTAAATTGAATCTTGGAACATATACGAGTCTTCATTTTATGCAT
gi|130846 : TTTCATCTTTTCAT-TTT-AGGGTTTTTATGAAAAATCATGCACATGTACTAAAATAT-----TTGCT---CTGT-ATT--TTTCATTTCTAAGCATATTTC-AGAGACAGTGTCAACCATGGAAGTGTTTT--CGTTCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--A---AGGT-TTTGTCGGACCTACA------GCC----G---TC-AACACATTCCAGTTATT--GATTTTACAC---AAAGCAAATTGAATCTT-GAACATATACAAGTCTCCATTTTATGCAT
gi|130841 : TTTCATCTTT-CGGGTTTGTATGAGGGATCGTGCACTTG-ACCAAAATAT-----TTGCT---CTGT-ATT--ATTTGTCTC--AGCTTATTGC-AGAGACAGTGTCAACAATCGGAGTTTTTT--CGATCAAGTTCACTTGGGCTAATGAAACTAGACAGAGGTTCAG---AGGT-TCTTTCGGACCTACA------GCC----G---TC-AACATATTCCAGCTATT--GATTTTACAC---CAAGGAAATTGAATCTTAGAACATATACAAGTCTTCATTTTATGCAT
gi|130848 : tttaaagTTTCATCTTT-TGGATTTGTACGAGGAATCATACGCATCTACCAAAATAT-----TTGCT---
gi|130849 : ttcaaaTTTCATCTTT-TGGATTAGTACGAGGAATCATGCACATCTACCAATATAG-----TTGCT---CTGT-ATT--ATTTGTCTTTCAGCATATTGC-AGAGACGGCGTCAACAATCGAAG--TTAGTTCGATCAAATTCACTTGGGCTAGTGAAACTAGAT------T--G---AGGT-TCTGTCGGACCTACAGCC---GCC----G---TC-AACACATTCCAGCTATT--GATTTTACAC---AAATCAAATTGAATCTnnnnnnnnnnctaccaaaatatttgctctgtattatttgtctctcagcatattgcagcgacggtgtcaacaatcgaagttatttcgatcaagttcacttgggctagtgaaacaacattgaggttctgtcggacctacagccgccgtcaacacatttcagctattgattttacacaaagcaaattgaatcttagaacatatacaagtctccattttatgcat
gi|130850 : ttcaaaTTTCATCTTT-CGGGTTTGCATGAGGGATCATGCACATGTACCAAAATAT-----TTGCT---CTAT-TTT--ATTTGTCTC--AGTTTATTGC-AGAGACAGTGTCAACAATCGAAGTGTTTTA-CGATCAAATTCACATGGGCTAGTGAAATTAGAC------T--G---AGGT-TCTGTCGTACCTACA------GCC----A---TC-AATAGTTTTCATCTATT--GATTTTACAC---AAAGAAAATTGTTTCTTTGAATATATACACTTCCCTTTTTTATGCAT
gi|130842 : ttcaagTTTCATCTTT-CGGGTTTGTATGAGGGATCGTGCACATGTACCAAAATAT-----TTGCT---CTGT-ATT--ATTTG--TCTCACCTTATTGC-AGAGACAGTGTCAACAATAGAAG-TGTTATACGATCAAATTCACTTGGGCTAGTGAAACTAGAC------T--A---AGGT-TCTGTCATA-CTACA------GCC----A---TC-AATACTTTTCATCTATT--GATTTTACAC---AAAGAAAATTGTTTCTTCGAATATAAAC----TTCTTTTTTATGCAT
gi|130847 : tttaaaaTTTTATCTTT-CGGGTTTGTATGAGGTGCCATATACATGTTACAAAATAT-----TTGCT---CT---ACG--ATTC--CTCTAAGCATATTGC-AGAGACA---------ATCAAAATTTTTC--CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--T---AGCT-TCT-TCAGACCTACATGTACGGCC----G---TC-A----------GTTATT--GATATTACAA---AAAGCAAATTGTATCTTAGAACATATACAGATCTCCATTTTATGCA
gi|130843 : tttaaaaTTTCAT-ATTACGGGTTTGTATGAGGGATCATGCACATGTACCAAAATAT-----TTGCT---CTGT-ATT--ATTTGTCTCTCAGCATATTGC-AGTGACGG
gi|130851 : tttaaaaTTTCATGTTT-TGGGTTTGTACAAGGAATCATGCACATGTACCAAAATATAAAATTTGCT---CTGT-ATT--ATTTGACTCTCAGCATATTGC-AGAGACAGTGTCAACAATCggctagtgtaactggacagagattctgtcggacctacagccgtcaaaacattccaactattgattttacacaaagcaaattgaatcttggaacatatacgagtctacattttatgcat
gi|130852 : ttcaaa-TTT-CGGGTTTGTAAGAGGAATCATGTACATGTACCAAAATAT-----TCGCT---TTGT-ATT--ATTTGTCTCTCAGCATATTNN-NNNNNNNN--------ATCGAAGTGTTTT--CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--A---AGGT-TCTGTCTGACCTACA------GCC----G---TC-AACACATTTCAGCTATT--GATTTTACAC---AAAGCAAATTGAATCTTAGAACATATACAAGTCTCCATTTTAAGCATa
gi|130853 : aaatattatc-TTT-TGGGTTTGTATGAGGAATCATGCACATGTACCAAAATAT-----TTGCT---CTGT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGATGCCGACAATCAAAG--TTTTTTCGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTG
gi|130848 : aaatattatcTACCAAAATAT-----TTGCT---CTGT-ATT--ATTTGTCTCTCAGCATATTGC-AGCGACGGTGTCAACAATCGAAGTTATTT--CGATCAAGTTCACTTGGGCTAGTGAAACAACAT------T--G---AGGT-TCTGTCGGACCTACA------GCC----GCCGTC-AACACATTTCAGCTATT--GATTTTACAC---AAAGCAAATTGAATCTTAGAACATATACAAGTCTCCATTTTATGCAT
gi|130854 : ttcaaatttcatcttttggatttgtacgaggaatcatacgcatctaccaaaatatttgctnnnnnnnnnncAAAATAT-----GTGCTTTTGTGTGATTTGATTTGTCTCTTAACAT-TTACCAGAGACGGTGTCATTAATAGCAGTTTATAG--GATAAAGTTCACTTGGGCTAGTGAAACTAGAC------T--GTACAGTTGTCAGTCATACATACA------ACCATTGA---TT-GACACATACC----ATTAAAATTTCACACTAAATAGCATATTGTAACTTAGCACATATATA--TCTCCATTTTATGCAT
gi|130855 : TGTCTCTCAGCATATTGC-AGAGACAGTGTCAACAATCGAAGTTTT--TTCGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTGTCGGACATACA------GCC----G---TCAAACACATTTTAGCTATT--GATTTTACAC---AAAGCAAA-TGAATCTTAGAACATATACAATTCTCCATTTTTTGCAT
gi|130843 : GGGCTAGTGTAACTGGAC------A--G---AGAT-TCTGTCGGACCTACA------GCC----G---TC-AAAACATTCCAACTATT--GATTTTACAC---AAAGCAAATTGAATCTTGGAACATATACGAGTCTACATTTTATGCAT
gi|130856 : tttaaaatttcatattacgggtttgtatgagggatcatgcacatgtaccaaaatatttgctctgtattatttgtctctcagcatattgcagtgacgCTAGTGTAACTAGAC------T--G---AGGT-TCTGTCGGACCTACA------GTC----T---TCAAACACATTCCAGCTATT--TATTTTACTC---AATGTAAATTGAATCTTAGAANNNNNNNNNNTGTCT
gi|130857 : CAGCTATT--GATTTTACAC---AAAGCAAATTGAATCTTGGAATATATACATGTCTCCATTTTATGCATc
gi|130858 : CAC---AAAGCAAAT-GAATCTTAGAACATATACAAGTCTCCATTTTATGCAT
Alignments
lowQualScore : 1111111111111 1111 111111
lowQualScore : 7 33 66666 8888888 4444444444444 66666 444 2 33 2 2 4444 666666 33 444 2 111111 5555 444 2 2 33 2 33 0 33
lowQualScore : . .. ..... ....... ............. ..... ... . .. . . .... ...... .. ... . ...... .... ... . . .. . .. . ..
lowQualScore : 7 77 77777 7777777 7777777777777 22222 444 5 44 4 6 5555 888888 22 111 4 666666 3333 444 5 5 22 2 11 4 22
consensus : TTTCATCTTTTCATCTTTCGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGGTGTCAACAATCGAAGTTTT-TTTCGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT
Reference ( family-813 ) : TTTCATCTTTTCATCTTTCGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGGTGTCAACAATCGAAGTTTT-TTTCGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT
gi|130839 : TTTCATCTTTTCAT-TTTCGGGTTTGTATGAGGGATCTT--GCA-----CA-------TG-------------TACCAACATAT-----TTGCTAT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACAGTGTCAACAATCGAAGTTTTTTTTCGATCAAGTTCATTTGGGCTAGTGAAAATAGAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AT--AGCAAATTGAATCTTAAAACATATACAA--GTCTCTATTTTATGCAT
gi|130840 : TTTCATCTTTTCAT-TTTCGGGTTTGTATGAGGAATCTT--GCA-----CA-------TG-------------TAACAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACAGTGTTTACAATCGAAGTTTT-TTT-GATCAGGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGA-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-CA--AGGAAATTGAATCTTGGAACATATACAA--GTCTTCATTTTATGCAT
gi|130841 : TTTCATCTTTCGGGTTTGTATGAGGGATCGT--GCA-----CT-------TG--------------ACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTC--AGCTTATTGC-AGAGACAGTGTCAACAATCGGAGTTTT-TT-CGATCAAGTTCACTTGGGCTAATGAAACTAGACAGAGGTTCAG---AGGT-TCTTTCGGACCTACA------GCC----G---TC-AA-CATATTCCAGCTATT--GATTTTACAC-CA--AGGAAATTGAATCTTAGAACATATACAA--GTCTTCATTTTATGCAT
gi|130842 : tttaaagTTTCATCTTTCGGGTTTGTATGAGGGATCGT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTG--TCTCACCTTATTGC-AGAGACAGTGTCAACAATAGAAGTGTT-ATACGATCAAATTCACTTGGGCTAGTGAAACTAGAC------T--A---AGGT-TCTGTCATA-CTACA------GCC----A---TC-AA-TACTTTTCATCTATT--GATTTTACAC-AA--AGAAAATTGTTTCTTCGAATATAAAC------TTCTTTTTTATGCAT
gi|130843 : tttaaaaTTTCATATTACGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGTGACGG
gi|130843 : tttaaaaGGGCTAGTGTAACTGGAC------A--G---AGAT-TCTGTCGGACCTACA------GCC----G---TC-AA-AACATTCCAACTATT--GATTTTACAC-AA--AGCAAATTGAATCTTGGAACATATACGA--GTCTACATTTTATGCATggctagtgtaactggacagagattctgtcggacctacagccgtcaaaacattccaactattgattttacacaaagcaaattgaatcttggaacatatacgagtctacattttatgcat
gi|130844 : tttaaaatttcatattacgggtttgtatgagggatcatgcacatgtaccaaaatatttgctctgtattatttgtctctcagcatattgcagtgacgTTTCATTTTTTCAT-TTTCGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAATTAT-----TTACTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGGTGCCGGCAATCAAAGTTTT--TTCGATCAAGTTCATTTGGGCTAGTGAAATTAGAC------T--G---AGAT-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGCAAA-TGAAACTCAGAACATATACAA--GTCTCCATTATATACAT
gi|130845 : TTTCATCTTTTCATTTTT-GGTTTTGTATGAGTGATTAT--CCC-----CA-------TG-------------TACCAAATTAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGA-AGAAACTGTGTCAACAATAGAAGTTTT---TCGATCAAGTTCACTTGGGCTAGTGAAACTAAAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGTAAATTGAATCTTGGAACATATACGA--GTCTTCATTTTATGCAT
gi|130846 : TTTCATCTTTTCAT-TTTAGGGTTTTTATGAAAAATCAT--GCA-----CA-------TG-------------TACTAAAATAT-----TTGCTCT---GT-ATT--TTTCATTTCTAAGCATATTTC-AGAGACAGTGTCAACCATGGAAGTGTT-TT-CGTTCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--A---AGGT-TTTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGTTATT--GATTTTACAC-AA--AGCAAATTGAATCTT-GAACATATACAA--GTCTCCATTTTATGCAT
gi|130847 : TTTTATCTTTCGGGTTTGTATGAGGTGCCAT--ATA-----CA-------TG-------------TTACAAAATAT-----TTGCTCT------ACG--ATTC--CTCTAAGCATATTGC-AGAGAC---------AATCAAAATTTT-TC-CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--T---AGCT-TCT-TCAGACCTACATGTACGGCC----G---TC-A-----------GTTATT--GATATTACAA-AA--AGCAAATTGTATCTTAGAACATATACAG--ATCTCCATTTTATGCA
gi|130848 : tttaaaaTTTCATCTTTTGGATTTGTACGAGGAATCATACGCATCTACCAAAATATTTGCTNNNNNNNNNNCTACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGCGACGGTGTCAACAATCGAAGTTAT-TT-CGATCAAGTTCACTTGGGCTAGTGAAACAACAT------T--G---AGGT-TCTGTCGGACCTACA------GCC----GCCGTC-AA-CACATTTCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT
gi|130849 : ttcaaaTTTCATCTTTTGGATTAGTACGAGGAATCAT--GCA-----CA-------TC-------------TACCAATATAG-----TTGCTCT---GT-ATT--ATTTGTCTTTCAGCATATTGC-AGAGACGGCGTCAACAATCGAAG-TTA-GTTCGATCAAATTCACTTGGGCTAGTGAAACTAGAT------T--G---AGGT-TCTGTCGGACCTACAGCC---GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--ATCAAATTGAATCT
gi|130850 : ttcaaaTTTCATCTTTCGGGTTTGCATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---AT-TTT--ATTTGTCTC--AGTTTATTGC-AGAGACAGTGTCAACAATCGAAGTGTT-TTACGATCAAATTCACATGGGCTAGTGAAATTAGAC------T--G---AGGT-TCTGTCGTACCTACA------GCC----A---TC-AA-TAGTTTTCATCTATT--GATTTTACAC-AA--AGAAAATTGTTTCTTTGAATATATACAC--TTCCCTTTTTTATGCAT
gi|130851 : ttcaagTTTCATGTTTTGGGTTTGTACAAGGAATCAT--GCA-----CA-------TG-------------TACCAAAATATAAAATTTGCTCT---GT-ATT--ATTTGACTCTCAGCATATTGC-AGAGACAGTGTCAACAATC
gi|130852 : ttcaaaTTATCTTTCGGGTTTGTAAGAGGAATCAT--GTA-----CA-------TG-------------TACCAAAATAT-----TCGCTTT---GT-ATT--ATTTGTCTCTCAGCATATTNN-NNNNNNNN--------ATCGAAGTGTT-TT-CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--A---AGGT-TCTGTCTGACCTACA------GCC----G---TC-AA-CACATTTCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTAAGCATa
gi|130853 : aaataTTATCTTTTGGGTTTGTATGAGGAATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGATGCCGACAATCAAAG-TTT-TTTCGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTG
gi|130854 : aaataAAAATAT-----GTGCTTTTGTGTGATTTGATTTGTCTCTTAACAT-TTACCAGAGACGGTGTCATTAATAGCAGTTTA-TAG-GATAAAGTTCACTTGGGCTAGTGAAACTAGAC------T--GTACAGTTGTCAGTCATACATACA------ACCATTGA---TT-GA-CACATACC----ATTAAAATTTCACACTAAATAGCATATTGTAACTTAGCACATATATA----TCTCCATTTTATGCAT
gi|130855 : TGTCTCTCAGCATATTGC-AGAGACAGTGTCAACAATCGAAGTTTT--TTCGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTGTCGGACATACA------GCC----G---TCAAA-CACATTTTAGCTATT--GATTTTACAC-AA--AGCAAA-TGAATCTTAGAACATATACAA--TTCTCCATTTTTTGCAT
gi|130856 : CTAGTGTAACTAGAC------T--G---AGGT-TCTGTCGGACCTACA------GTC----T---TC-AAACACATTCCAGCTATT--TATTTTACTC-AA--TGTAAATTGAATCTTAGAANNNNNNNNNNTGTCTC
gi|130857 : CAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTGGAATATATACAT--GTCTCCATTTTATGCAT
gi|130858 : CAC-AA--AGCAAAT-GAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT
Alignments
lowQualScore : 1111111111111 1111 111111
lowQualScore : 7 33 66666 8888888 4444444444444 66666 444 2 33 2 2 4444 666666 33 444 2 111111 5555 444 2 2 33 2 33 0 33
lowQualScore : . .. ..... ....... ............. ..... ... . .. . . .... ...... .. ... . ...... .... ... . . .. . .. . ..
lowQualScore : 7 77 77777 7777777 7777777777777 22222 444 5 44 4 6 5555 888888 22 111 4 666666 3333 444 5 5 22 2 11 4 22
consensus : TTTCATCTTTTCATCTTTCGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGGTGTCAACAATCGAAGTTTT-TTTCGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT
Reference ( family-813 ) : TTTCATCTTTTCATCTTTCGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGGTGTCAACAATCGAAGTTTT-TTTCGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT
gi|130839 : TTTCATCTTTTCAT-TTTCGGGTTTGTATGAGGGATCTT--GCA-----CA-------TG-------------TACCAACATAT-----TTGCTAT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACAGTGTCAACAATCGAAGTTTTTTTTCGATCAAGTTCATTTGGGCTAGTGAAAATAGAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AT--AGCAAATTGAATCTTAAAACATATACAA--GTCTCTATTTTATGCAT
gi|130840 : TTTCATCTTTTCAT-TTTCGGGTTTGTATGAGGAATCTT--GCA-----CA-------TG-------------TAACAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACAGTGTTTACAATCGAAGTTTT-TTT-GATCAGGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGA-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-CA--AGGAAATTGAATCTTGGAACATATACAA--GTCTTCATTTTATGCAT
gi|130841 : TTTCATCTTTCGGGTTTGTATGAGGGATCGT--GCA-----CT-------TG--------------ACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTC--AGCTTATTGC-AGAGACAGTGTCAACAATCGGAGTTTT-TT-CGATCAAGTTCACTTGGGCTAATGAAACTAGACAGAGGTTCAG---AGGT-TCTTTCGGACCTACA------GCC----G---TC-AA-CATATTCCAGCTATT--GATTTTACAC-CA--AGGAAATTGAATCTTAGAACATATACAA--GTCTTCATTTTATGCAT
gi|130842 : tttaaagTTTCATCTTTCGGGTTTGTATGAGGGATCGT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTG--TCTCACCTTATTGC-AGAGACAGTGTCAACAATAGAAGTGTT-ATACGATCAAATTCACTTGGGCTAGTGAAACTAGAC------T--A---AGGT-TCTGTCATA-CTACA------GCC----A---TC-AA-TACTTTTCATCTATT--GATTTTACAC-AA--AGAAAATTGTTTCTTCGAATATAAAC------TTCTTTTTTATGCAT
gi|130843 : tttaaaaTTTCATATTACGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGTGACGG
gi|130843 : tttaaaaGGGCTAGTGTAACTGGAC------A--G---AGAT-TCTGTCGGACCTACA------GCC----G---TC-AA-AACATTCCAACTATT--GATTTTACAC-AA--AGCAAATTGAATCTTGGAACATATACGA--GTCTACATTTTATGCATggctagtgtaactggacagagattctgtcggacctacagccgtcaaaacattccaactattgattttacacaaagcaaattgaatcttggaacatatacgagtctacattttatgcat
gi|130844 : tttaaaatttcatattacgggtttgtatgagggatcatgcacatgtaccaaaatatttgctctgtattatttgtctctcagcatattgcagtgacgTTTCATTTTTTCAT-TTTCGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAATTAT-----TTACTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGGTGCCGGCAATCAAAGTTTT--TTCGATCAAGTTCATTTGGGCTAGTGAAATTAGAC------T--G---AGAT-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGCAAA-TGAAACTCAGAACATATACAA--GTCTCCATTATATACAT
gi|130845 : TTTCATCTTTTCATTTTT-GGTTTTGTATGAGTGATTAT--CCC-----CA-------TG-------------TACCAAATTAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGA-AGAAACTGTGTCAACAATAGAAGTTTT---TCGATCAAGTTCACTTGGGCTAGTGAAACTAAAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGTAAATTGAATCTTGGAACATATACGA--GTCTTCATTTTATGCAT
gi|130846 : TTTCATCTTTTCAT-TTTAGGGTTTTTATGAAAAATCAT--GCA-----CA-------TG-------------TACTAAAATAT-----TTGCTCT---GT-ATT--TTTCATTTCTAAGCATATTTC-AGAGACAGTGTCAACCATGGAAGTGTT-TT-CGTTCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--A---AGGT-TTTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGTTATT--GATTTTACAC-AA--AGCAAATTGAATCTT-GAACATATACAA--GTCTCCATTTTATGCAT
gi|130847 : TTTTATCTTTCGGGTTTGTATGAGGTGCCAT--ATA-----CA-------TG-------------TTACAAAATAT-----TTGCTCT------ACG--ATTC--CTCTAAGCATATTGC-AGAGAC---------AATCAAAATTTT-TC-CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--T---AGCT-TCT-TCAGACCTACATGTACGGCC----G---TC-A-----------GTTATT--GATATTACAA-AA--AGCAAATTGTATCTTAGAACATATACAG--ATCTCCATTTTATGCA
gi|130848 : tttaaaaTTTCATCTTTTGGATTTGTACGAGGAATCATACGCATCTACCAAAATATTTGCTNNNNNNNNNNCTACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGCGACGGTGTCAACAATCGAAGTTAT-TT-CGATCAAGTTCACTTGGGCTAGTGAAACAACAT------T--G---AGGT-TCTGTCGGACCTACA------GCC----GCCGTC-AA-CACATTTCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT
gi|130849 : ttcaaaTTTCATCTTTTGGATTAGTACGAGGAATCAT--GCA-----CA-------TC-------------TACCAATATAG-----TTGCTCT---GT-ATT--ATTTGTCTTTCAGCATATTGC-AGAGACGGCGTCAACAATCGAAG-TTA-GTTCGATCAAATTCACTTGGGCTAGTGAAACTAGAT------T--G---AGGT-TCTGTCGGACCTACAGCC---GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--ATCAAATTGAATCT
gi|130850 : ttcaaaTTTCATCTTTCGGGTTTGCATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---AT-TTT--ATTTGTCTC--AGTTTATTGC-AGAGACAGTGTCAACAATCGAAGTGTT-TTACGATCAAATTCACATGGGCTAGTGAAATTAGAC------T--G---AGGT-TCTGTCGTACCTACA------GCC----A---TC-AA-TAGTTTTCATCTATT--GATTTTACAC-AA--AGAAAATTGTTTCTTTGAATATATACAC--TTCCCTTTTTTATGCAT
gi|130851 : ttcaagTTTCATGTTTTGGGTTTGTACAAGGAATCAT--GCA-----CA-------TG-------------TACCAAAATATAAAATTTGCTCT---GT-ATT--ATTTGACTCTCAGCATATTGC-AGAGACAGTGTCAACAATC
gi|130852 : ttcaaaTTATCTTTCGGGTTTGTAAGAGGAATCAT--GTA-----CA-------TG-------------TACCAAAATAT-----TCGCTTT---GT-ATT--ATTTGTCTCTCAGCATATTNN-NNNNNNNN--------ATCGAAGTGTT-TT-CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--A---AGGT-TCTGTCTGACCTACA------GCC----G---TC-AA-CACATTTCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTAAGCATa
gi|130853 : aaataTTATCTTTTGGGTTTGTATGAGGAATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGATGCCGACAATCAAAG-TTT-TTTCGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTG
gi|130854 : aaataAAAATAT-----GTGCTTTTGTGTGATTTGATTTGTCTCTTAACAT-TTACCAGAGACGGTGTCATTAATAGCAGTTTA-TAG-GATAAAGTTCACTTGGGCTAGTGAAACTAGAC------T--GTACAGTTGTCAGTCATACATACA------ACCATTGA---TT-GA-CACATACC----ATTAAAATTTCACACTAAATAGCATATTGTAACTTAGCACATATATA----TCTCCATTTTATGCAT
gi|130855 : TGTCTCTCAGCATATTGC-AGAGACAGTGTCAACAATCGAAGTTTT--TTCGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTGTCGGACATACA------GCC----G---TCAAA-CACATTTTAGCTATT--GATTTTACAC-AA--AGCAAA-TGAATCTTAGAACATATACAA--TTCTCCATTTTTTGCAT
gi|130856 : CTAGTGTAACTAGAC------T--G---AGGT-TCTGTCGGACCTACA------GTC----T---TC-AAACACATTCCAGCTATT--TATTTTACTC-AA--TGTAAATTGAATCTTAGAANNNNNNNNNNTGTCTC
gi|130857 : CAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTGGAATATATACAT--GTCTCCATTTTATGCAT
gi|130858 : CAC-AA--AGCAAAT-GAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT
blockSeqs : C AC TCTAC AAATATT CTNNNNNNNNNNC AAAAT TGT G TG C A TTT AGAGGT CA TAC G TGTACG ATTG CCG A A AA T AT NT
blockSeqs : C . . . . . . . . . A ATA . . . . GCC . . . . . . . .
blockSeqs : A . . . . . . . . . A GTT . . . . . . . . . . . . .
blockSeqs : T . . . . . . . . . G TTA . . . . . . . . . . . . .
blockSeqs : C . . . . . . . . . G TTT . . . . . . . . . . . . .
blockSeqs : C . . . . . . . . . T TAG . . . . . . . . . . . . .
blockSeqs : C . . . . . . . . . A TT . . . . . . . . . . . . .
blockSeqs : C . . . . . . . . . G TT . . . . . . . . . . . . .
blockSeqs : G . . . . . . . . . G TT . . . . . . . . . . . . .
blockSeqs : C . . . . . . . . . A TC . . . . . . . . . . . . .
blockSeqs : C . . . . . . . . . A TT . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . N TT . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . G TT . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . G T . . . . . . . . . . . . .
blockSeqs : . . . . . A . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . .
blockSeqs : . .
blockSeqCons : TT**
originalCons : TTTCATCTTTTCATCTTTCGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGGTGTCAACAATCGAAGTTTT-TTTCGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT
finalCons : TTTCATCTTTTCATCTTTCGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGGTGTCAACAATCGAAGTTTTTT--CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----G---TC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT
Alignments
lowQualScore : 1111111111111 111111
lowQualScore : 7 33 66666 8888888 4444444444444 66666 444 2 33 2 2 66 2 666666 33 444 2 555555 5555 2 2 33 2 33 0 33
lowQualScore : . .. ..... ....... ............. ..... ... . .. . . .. . ...... .. ... . ...... .... . . .. . .. . ..
lowQualScore : 7 77 77777 7777777 7777777777777 22222 444 5 44 4 6 33 7 888888 22 111 4 999999 3333 5 5 22 2 11 4 22
consensus : TTTCATCTTTTCATCTTTCGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGGTGTCAACAATCGAAGTTTT--TT-CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----GTC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT
Reference ( family-813 ) : TTTCATCTTTTCATCTTTCGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGGTGTCAACAATCGAAGTTTT--TT-CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----GTC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT
gi|130839 : TTTCATCTTTTCAT-TTTCGGGTTTGTATGAGGGATCTT--GCA-----CA-------TG-------------TACCAACATAT-----TTGCTAT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACAGTGTCAACAATCGAAGTTTTTTTT-CGATCAAGTTCATTTGGGCTAGTGAAAATAGAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----GTC-AA-CACATTCCAGCTATT--GATTTTACAC-AT--AGCAAATTGAATCTTAAAACATATACAA--GTCTCTATTTTATGCAT
gi|130840 : TTTCATCTTTTCAT-TTTCGGGTTTGTATGAGGAATCTT--GCA-----CA-------TG-------------TAACAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACAGTGTTTACAATCGAAGTTTT--TT-TGATCAGGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGA-TCTGTCGGACCTACA------GCC----GTC-AA-CACATTCCAGCTATT--GATTTTACAC-CA--AGGAAATTGAATCTTGGAACATATACAA--GTCTTCATTTTATGCAT
gi|130841 : TTTCATCTTTCGGGTTTGTATGAGGGATCGT--GCA-----CT-------TG--------------ACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTC--AGCTTATTGC-AGAGACAGTGTCAACAATCGGAGTTTT--TT-CGATCAAGTTCACTTGGGCTAATGAAACTAGACAGAGGTTCAG---AGGT-TCTTTCGGACCTACA------GCC----GTC-AA-CATATTCCAGCTATT--GATTTTACAC-CA--AGGAAATTGAATCTTAGAACATATACAA--GTCTTCATTTTATGCAT
gi|130842 : tttaaagTTTCATCTTTCGGGTTTGTATGAGGGATCGT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTG--TCTCACCTTATTGC-AGAGACAGTGTCAACAATAGAAGTGTTA-TA-CGATCAAATTCACTTGGGCTAGTGAAACTAGAC------T--A---AGGT-TCTGTCATA-CTACA------GCC----ATC-AA-TACTTTTCATCTATT--GATTTTACAC-AA--AGAAAATTGTTTCTTCGAATATAAAC------TTCTTTTTTATGCAT
gi|130843 : tttaaaaTTTCATATTACGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGTGACGG
gi|130843 : tttaaaaGGGCTAGTGTAACTGGAC------A--G---AGAT-TCTGTCGGACCTACA------GCC----GTC-AA-AACATTCCAACTATT--GATTTTACAC-AA--AGCAAATTGAATCTTGGAACATATACGA--GTCTACATTTTATGCATggctagtgtaactggacagagattctgtcggacctacagccgtcaaaacattccaactattgattttacacaaagcaaattgaatcttggaacatatacgagtctacattttatgcat
gi|130844 : tttaaaatttcatattacgggtttgtatgagggatcatgcacatgtaccaaaatatttgctctgtattatttgtctctcagcatattgcagtgacgTTTCATTTTTTCAT-TTTCGGGTTTGTATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAATTAT-----TTACTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGGTGCCGGCAATCAAAGTTTT--TT-CGATCAAGTTCATTTGGGCTAGTGAAATTAGAC------T--G---AGAT-TCTGTCGGACCTACA------GCC----GTC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGCAAA-TGAAACTCAGAACATATACAA--GTCTCCATTATATACAT
gi|130845 : TTTCATCTTTTCATTTTT-GGTTTTGTATGAGTGATTAT--CCC-----CA-------TG-------------TACCAAATTAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGA-AGAAACTGTGTCAACAATAGAAGTTTT---T-CGATCAAGTTCACTTGGGCTAGTGAAACTAAAC------T--G---AGGT-TCTGTCGGACCTACA------GCC----GTC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--AGTAAATTGAATCTTGGAACATATACGA--GTCTTCATTTTATGCAT
gi|130846 : TTTCATCTTTTCAT-TTTAGGGTTTTTATGAAAAATCAT--GCA-----CA-------TG-------------TACTAAAATAT-----TTGCTCT---GT-ATT--TTTCATTTCTAAGCATATTTC-AGAGACAGTGTCAACCATGGAAGTGTT--TT-CGTTCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--A---AGGT-TTTGTCGGACCTACA------GCC----GTC-AA-CACATTCCAGTTATT--GATTTTACAC-AA--AGCAAATTGAATCTT-GAACATATACAA--GTCTCCATTTTATGCAT
gi|130847 : TTTTATCTTTCGGGTTTGTATGAGGTGCCAT--ATA-----CA-------TG-------------TTACAAAATAT-----TTGCTCT------ACG--ATTC--CTCTAAGCATATTGC-AGAGAC---------AATCAAAATTTT--TC-CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--T---AGCT-TCT-TCAGACCTACATGTACGGCC----GTC-A-----------GTTATT--GATATTACAA-AA--AGCAAATTGTATCTTAGAACATATACAG--ATCTCCATTTTATGCA
gi|130848 : tttaaaaTTTCATCTTTTGGATTTGTACGAGGAATCATACGCATCTACCAAAATATTTGCTNNNNNNNNNNCTACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGCGACGGTGTCAACAATCGAAGTTAT--TT-CGATCAAGTTCACTTGGGCTAGTGAAACAACAT------T--G---AGGT-TCTGTCGGACCTACAGCC---GCC----GTC-AA-CACATTTCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT
gi|130849 : ttcaaaTTTCATCTTTTGGATTAGTACGAGGAATCAT--GCA-----CA-------TC-------------TACCAATATAG-----TTGCTCT---GT-ATT--ATTTGTCTTTCAGCATATTGC-AGAGACGGCGTCAACAATCGAAGTTAG--TT-CGATCAAATTCACTTGGGCTAGTGAAACTAGAT------T--G---AGGT-TCTGTCGGACCTACAGCC---GCC----GTC-AA-CACATTCCAGCTATT--GATTTTACAC-AA--ATCAAATTGAATCT
gi|130850 : ttcaaaTTTCATCTTTCGGGTTTGCATGAGGGATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---AT-TTT--ATTTGTCTC--AGTTTATTGC-AGAGACAGTGTCAACAATCGAAGTGTT--TTACGATCAAATTCACATGGGCTAGTGAAATTAGAC------T--G---AGGT-TCTGTCGTACCTACA------GCC----ATC-AA-TAGTTTTCATCTATT--GATTTTACAC-AA--AGAAAATTGTTTCTTTGAATATATACAC--TTCCCTTTTTTATGCAT
gi|130851 : ttcaagTTTCATGTTTTGGGTTTGTACAAGGAATCAT--GCA-----CA-------TG-------------TACCAAAATATAAAATTTGCTCT---GT-ATT--ATTTGACTCTCAGCATATTGC-AGAGACAGTGTCAACAATC
gi|130852 : ttcaaaTTATCTTTCGGGTTTGTAAGAGGAATCAT--GTA-----CA-------TG-------------TACCAAAATAT-----TCGCTTT---GT-ATT--ATTTGTCTCTCAGCATATTNN-NNNNNNNN--------ATCGAAGTGTT--TT-CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--A---AGGT-TCTGTCTGACCTACA------GCC----GTC-AA-CACATTTCAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTAGAACATATACAA--GTCTCCATTTTAAGCATa
gi|130853 : aaataTTATCTTTTGGGTTTGTATGAGGAATCAT--GCA-----CA-------TG-------------TACCAAAATAT-----TTGCTCT---GT-ATT--ATTTGTCTCTCAGCATATTGC-AGAGACGATGCCGACAATCAAAGTTTT--TT-CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTG
gi|130854 : aaataAAAATAT-----GTGCTTTTGTGTGATTTGATTTGTCTCTTAACAT-TTACCAGAGACGGTGTCATTAATAGCAGTTTA--TA-GGATAAAGTTCACTTGGGCTAGTGAAACTAGAC------T--GTACAGTTGTCAGTCATACATACA------ACCATTGATT-GA-CACATACC----ATTAAAATTTCACACTAAATAGCATATTGTAACTTAGCACATATATA----TCTCCATTTTATGCAT
gi|130855 : TGTCTCTCAGCATATTGC-AGAGACAGTGTCAACAATCGAAGTTTT--TT-CGATCAAGTTCACTTGGGCTAGTGAAACTAGAC------T--G---AGGT-TCTGTCGGACATACA------GCC----GTCAAA-CACATTTTAGCTATT--GATTTTACAC-AA--AGCAAA-TGAATCTTAGAACATATACAA--TTCTCCATTTTTTGCAT
gi|130856 : CTAGTGTAACTAGAC------T--G---AGGT-TCTGTCGGACCTACA------GTC----TTC-AAACACATTCCAGCTATT--TATTTTACTC-AA--TGTAAATTGAATCTTAGAANNNNNNNNNNTGTCTC
gi|130857 : CAGCTATT--GATTTTACAC-AA--AGCAAATTGAATCTTGGAATATATACAT--GTCTCCATTTTATGCAT
gi|130858 : CAC-AA--AGCAAAT-GAATCTTAGAACATATACAA--GTCTCCATTTTATGCAT