lowQualScore : 111 1111 1111 11111111111 1111 111111111 3333333333 11 11 22 11 4444444 5555555555555 22222 2
lowQualScore : 6 3 1 3 9 5 111 8888 99 4444 1 6 1 3 1 0 1 555 3 2 3 5 4 99999999999 1 7777 9999 4 777777777 7777777777 7 33 8 66 55 888 0 9 7 5 1 3 777777 777 11 33 4 8888888 3 0000000000000 88888 0 3
lowQualScore : . . . . . . ... .... .. .... . . . . . . . ... . . . . . ........... . .... .... . ......... .......... . .. . .. .. ... . . . . . . ...... ... .. .. . ....... . ............. ..... . .
lowQualScore : 0 2 8 7 5 7 777 7777 22 2222 0 7 0 5 5 9 4 999 3 2 3 1 0 00000000000 0 2222 4444 4 888888888 9999999999 2 11 9 11 55 888 9 4 8 7 7 6 222222 777 22 11 7 1111111 5 4444444444444 22222 0 6
consensus : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAAGGCATGTCAGTTATTGACAGTGACTG---ACTTT---GGAA--ACATCAGTGACTAGGT----ATTTTGTGTGAAGAATATCA-TGGACAGATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTGCAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT--GGTAAAGT-GCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-AC-----------TTTGGACAC----AG----A-TAAAA---------ACAGGTT---------ATATCATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCGCTAAACCNAGACTTTAATACGTT---GAGGGAAAGGGCGTTGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA----TTTTN--AGCTCGCCTGGAGGCCANAGGCTCACAGGN-GAGCTTTTNTGATCGCCCGGTG-------NAC--CGTCTGTCGTTA-CACTTTTAGCTTNTAACCAAAAA
Reference ( gi|130783 ) : ATGTCTAAACACCAATACTGTTCTCTGTAGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAATGCATGTCAGTTATTGACAGTGACTG---ACTTT---TGAA--ACATCAGTGACTAGGT----ATTTTGTGTGAAGAATATCA-TGAACAGATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTAAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT--AGTAAAGT-GCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-AC-----------TTTAGACAC----AG----A-TAAAA---------ACAGGTT---------TTATTATCGCTACTGACAGTCTAC-CG-AGAGAG--CAGCCGCTAAACCAGGACTTTAATACGTT---GAGGGAAAGGGTGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA----TTTTG--AGCTCA--TGGAGGCCACAGGCTC----GA-GAGCTTTTCTGATCACTTGGT--------TAC--CGTTTGTCATTA-CATCTTTA-CTTGTAACCAAAAA
gi|130785 : ATGTCTAAACACCAATACTGTTCTCTGCGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCCGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAATGCATGTCAGTTATTGACAGTGACCG---ACTTT---TGAA--ACATCAGTGACTAGGT----ATTTTGTGTGAAGAATATCA-TGAACAGATCCTGAGTTTGTGTAAAGAATATCATGGACAGATCCTAAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT--AGTAAAGT-GCATCATCATATAATT-GTCATCCTCACACTATAGTTCAAA-AC-----------TTTAGACAC----AG----A-TAAAA---------ACAGGTT---------TTATCATCACTACGGACAGTCTAC-CG-AGAGAG--CAGCCGCTTAACCAGGACTTTAATACGTT---GAGGGAAAGGGTGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGTAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA----TTTTG--AGCTCA--TGGAGACCACAGGCTC----AA-GAGCTTTTCTGATCACTCGGT--------TAC--CGTTTGTCATTA-CATCTTTA-CTTGTAACCAAAAA
gi|130784 : ATGTCTAAACACCAATACTGTTTTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTCAAAAAATGAAAATGACAAGTGTAAAAGGCATGTCAGTTATTGACAGTGACTG---ACTTT---GGAA--ACATCAGTGACTAGGT----ATTT-GTGTGAAAAATATCA-TGGACAGATCCTGAGTTTGTGTGAAGAATATCATGGACAAATCCTGAATCTGCAGGGAGGGACATATACTGGTTTGCTTTTTCTTCT--AGTAAAGT-GCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-AC-----------CTTGGATAC----AA----A-TAAAA---------ACAGGTT---------ATATCATCGCTACCGACATTCTAT-CG-AGAGAG--CAGCCACTAAACCCAGACTTTAATACGTT---GAGGGAAAGGGTGTTGACATTGAAATGATTTTATTTCCATAAGACTGAACGAAGGAAACAGAATAAATGATGACT-GTTAAATGTTACTGTGGATGA----TTTTG--AGCTTG--TGGAGGCCACAGGCTC----AA-GAGCTTTTCTGATCACTCAGT--------GAC--CGTTTGTCATTA-TCTCTTTA-CTTGCAACCAAAA
gi|130786 : ATATCTAAACATCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTGCAGAACTGACCTGTTCCCAACATATTCAGCTTGGAAAAATGACATTGACAAGAGTAAAAGGCATGTCAGTTATTGACAGTGACTG---ATTTT---GGAA--ACATCAGTGACTAGAT----ATTTTGTATGAAGAATATCA-TGGACAGATCCTGGGTTTGTGTGAAGAATATCATGGACAGATCCTGAGCCTGCAGGGAGGGACATACACTCG-----------TTCT--AGTAAAGT-GAATCACCATATA--T-GTCATCATCGCACTATAGTTCAAA-AC-----------TTTGGACAC----AT----A-TACAA---------ACAGGTT---------ATATCATCGCTACTGACAGTCTAT-CA-AGAGAG--CAGCTACTAAACCCAGACTTTAATACGTT---GAGGGAAAGGGCATTGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGCAACAGAATAAATGATGTCT-GTTAAATGTTAATGCGGATGA----TTTTG--AGCCTA--TGGAGGCCTCAGGCTC----AA-GAGCTTTTCTGATCACTCAGT--------GAC--CGTTTGTCATTA-TCTCTTTA-CTTGTAACCAAAAA
gi|130787 : ATGTCCAA-CACTAATACTGTTCTCTGTGGTGATGCAGTGCTCTGAAATATCTGTATGCTGTACAGAACTGACCTGTTCCAAATATATTCAGCTTGGA------------------GTAAAAGGCATATCAGTTATCGACAGTGACTG---ACTTT---GTAA--ACATCAGTTGCTAGGT----ATTTTGTGTGAAGAATATCG-TGGACAGATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTACAGGGAAGGACATATACGCGTTTACTCTTTCTTCT--AGTAAAGT-GCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-AC-----------TTTGGACAT----AG----G-TAAAA---------ACAGGTA---------ATATCATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCACTAAACCCAGACTTTATTACGTT---GAGGGAAAGAGTGTGGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAGC-----AACTAATGACG-GTTAAATGTTATTGTCGATGG----TTTTG--AGCTCG--TGGAGGCCACTGGCTG----AA-GAGCTTTTCTGATCACTCAGT--------GAC--CGTTTGTCATTA-TCTTTTTA-CTTGTAACCAAAAA
gi|130788 : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTTCTCTGACAT--CTGTATGCTGTACAGAACTGACTTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGTGTAAAACGCATGTCAGTTATGGATAGT----G---ACT-------------------GACT-----------TTG---GAA--ACATCAGTGACAAGGT----ATTTTGTGTGAAGAATATCATGGCCAGATCCTGAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT--AGTAAAGT-GCATCACCATATAATT-GTCATCCTCGCACTAAAGTTCAAA-AC-----------ATTGGACAC----AG----A-TAAAA---------ACAGGTT---------ATATCATCGCTACTGACAGCTTAT-CG-AGAGAG--CAGCCACTAAACCCAGACTTTAATATGTT---GAGGGAAAGGGTGTTGACATTGCAATGATTTTATTTCAATAAAACTGAACGAAGGAAATGGAATGAATGATGACT-GTTCAATGTAATTGTGGATGA----TTTTG--AGCTCG--TGGAGGCCATACACTC----AA-GAGCTTTACTGAACACTCAGT--------GAC--CGTTTGTCATTATCTTTTTTA-CTTGTAACCAAAAA
gi|130789 : ATGTTTAAACACCAATACTGTTATATATGGTGATGCAATGCTCTGACATATCTGTATACTGTACAGAACTGACCTGTTTCCAACATATTCAGCTTGGAAAA-TGATATTGACAAGAGTAAAAGG------AAACAT---CAGTGACTAGGTATTTTGTGTGAAGAATATCATTGAC-AGATCCTGAGTTTGTGTGAAGAATATTA-TGGACAGATCCTGAGTTTGTGTGAAGAATATAATTGACAGAACCTGAGTCTGAAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT--AGTAAAGT-GCATCACCATATAATT-GTCATTCTCACACTATAGTTCAAA-AC-----------TTTGGACAC----AG----A-C-AAA---------ACAGGTT---------ATATCATCGCTACTGACAGTCTTT-CG-AGAGAT--CAGCCGCTAAACCAAGGATTTAATACGTT---GAGGGAAAGGGTGTTGACATTGCAATGATTTTATTTCCATAAGGCT
gi|130790 : GCCTGCAGTAA-----ATATTATCGCTT-CTTATTCTTTC--GGTAAAGT-ACATCACCATATAGGT-GGTATCCTCGCGCTA-----CAAA-AC-----------
gi|130791 : ATACATTTTCTTGTTCTTGTTTC---GGTTAAGT-GCATCACCATTTAAGA-GGCTTTCTTGCACTGAAGTTTAAA-AC-----------TTAGGACACGTG-AG----G-GAAGACCCCTATGTACAGGCTAAATATATGTTAAAATCGCTACTGACAATCTATACGTTGAGAG--CCGCTGCCACCCTA-GATTGGAATGCGTC---ATGGTAAGGGGCGTTGACAATGC
gi|130793 : tCTTCTTCTTCC--GGTAAAGT-GCATTACAATATAAGT-GGTATCCTCGCACTGTA
gi|130792 : CTTCTTCTTCTTCGGTAAAGT-GCATCACCATATAAGT-GGCATCCTTGTAATGTA
gi|130794 : tctttttcttTTTTCTTTT---GTGCATTTGGATCACCATATAATTTGGCATCCTCACAGTGTAGTTCAGACATGTGAGGGAGGGTTTATATGCATGTAG----ATTAAAA---------ACAGGTTA--------AAAGCATCACTACT---AGTCTAT-GG-AGGGAGACTAGCC
gi|130795 : TTCTTCC--GGTAAAGT-GAACCACCAT----CT-G-------CACACTGTAGTTTAAA-AC-----------TTGAGGGA-----GGATCCA-TAAGT---------ACAAGTTA--------AAATCATCACTACTGGCCGTCTATGTGTAGAGGG--CTGACACTATCCCA-GATTTGAATGCATCACAGAGGGGGGGGG-GT-GACAATGCcaaagac
gi|130796 : AAACTGAATACATTATGTGT-GGAAAATGGTGCT------------TTTTT--AGCTCACCTGA--GCCAAAGGCTCACAGGT-GAGCTTTTGTGATCGCCTGGTGTCTGTCGTCCGTCGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130797 : AATAATTGATTATTTGT--AGTGTTAGTTCAGCC------TTTTT--AGCTCACCTGA--GCCAAAGGCTCACAGGT-GAGCTTTTGTGATCACCTGGTG-------TCCGTCGTCTGTCGTTA--ACTTTTAGCTTTTAAC
gi|130799 : aaATATTATTTTCGA--A----TTTTT--AGCTCACCTGA--GCCAAAGGCTCACAGGT-GAACTTTTGTGATCACCTGGTGCC-----CGT--CGTCTGTCATTA--ACTTTTAGCTTTTAAC
gi|130800 : TTTTTGTGGGTGACTAATTTTATTAGCTCA--CCTAAGCCAAAGGCTCACATGT-GAGCTTTTGTGATCGCCTGGTGTC-----CAT--CGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130801 : TTATTTTG--TCA----TTTTT--AGCTCA--TATGAGCCAAAGGCTCACA-GATGAGTTTTTGTGACAGCCTGGTG-------TCCGTCGTCTGTCATTA--ACTTTTAGCTTCTAAC
gi|130798 : TTCTGAATCA----TTTTT--AGCTCACCTGA--GCCAAAGGCTCACAGGT-GAGCTTTTGTGATCGCTTGGTG-------TCCGTCGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130802 : aataagtcattcttgtTAA----TTTTA--AGCTCACCTGA--GCCAAAGGCTCACAGGT-GAGCTTTTATGATCGCCTGGTGTC-----CAT--CGTCTGTCAT
gi|130803 : GCTCG--TGGAGGCCACAGACTC----AA-GAGCTTTTCTGATCACTCAGT--------GAC--CGTTTGTCATTATCAT-TTTA-CT
Alignments
lowQualScore : 111 11111 2222222222222 111111111 111111111 111111 11111 222 11 11111 44444444444444 22 1
lowQualScore : 0 1 0 000 4 55 5 0 0 5 0 44444 2 3 5 2222222222222 555555555 777 4 777777777 555555 11111 8 8 66 6 1 888 3 5 5 0 2 2 77777 3 1 111 33 1 99999 1 0 22222222222222 1 11 2 1
lowQualScore : . . . ... . .. . . . . . ..... . . . ............. ......... ... . ......... ...... ..... . . .. . . ... . . . . . . ..... . . ... .. . ..... . . .............. . .. . .
lowQualScore : 3 9 7 000 3 00 7 2 9 7 5 22222 2 3 1 0000000000000 444444444 888 4 888888888 111111 11111 9 9 11 5 0 888 1 3 0 4 5 8 77777 1 0 999 99 0 11111 0 3 33333333333333 4 11 2 0
consensus : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTGCAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT-----GGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCGCTAAACCCAGACTTTAATACGTT---GAGGGAAAGGGCGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TNAGCTCGCCTGGAGGCCANAGGCTCACAGGNGAGCTTTTNTGATCGCCCGGTG---------CAC--CGTCTGTCGTTA-CACTTTTAGCTTNTAACCAAAAA
Reference ( family-801 ) : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTGCAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT-----GGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCGCTAAACCNAGACTTTAATACGTT---GAGGGAAAGGGCGTTGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TNAGCTCGCCTGGAGGCCANAGGCTCACAGGNGAGCTTTTNTGATCGCCCGGTG---------NAC--CGTCTGTCGTTA-CACTTTTAGCTTNTAACCAAAAA
gi|130783 : ATGTCTAAACACCAATACTGTTCTCTGTAGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAATG---CATGTCAGTTATTGACAGTGACTGACTTTTGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGAACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTAAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----AGACAC---AGA-TAAAA---------ACAGGTT-T----TATT-----ATCGCTACTGACAGTCTAC-CG-AGAGAG--CAGCCGCTAAACCAGGACTTTAATACGTT---GAGGGAAAGGGTGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TGAGCTCA--TGGAGGCCACAGGCTC----GAGAGCTTTTCTGATCACTTGGT----------TAC--CGTTTGTCATTA-CATCTTTA-CTTGTAACCAAAAA
gi|130784 : ATGTCTAAACACCAATACTGTTTTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTCAAAAAATGAAAATGACAAGTGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTT-GTGTGAAAAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAAATCCTGAATCTGCAGGGAGGGACATATACTGGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACCT---T-----GGATAC---AAA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACCGACATTCTAT-CG-AGAGAG--CAGCCACTAAACCCAGACTTTAATACGTT---GAGGGAAAGGGTGTTGACATTGAAATGATTTTATTTCCATAAGACTGAACGAAGGAAACAGAATAAATGATGACT-GTTAAATGTTACTGTGGATGA-----TTT-TGAGCTTG--TGGAGGCCACAGGCTCA----AGAGCTTTTCTGATCACTCAGTG----------AC--CGTTTGTCATTA-TCTCTTTA-CTTGCAACCAAAA
gi|130785 : ATGTCTAAACACCAATACTGTTCTCTGCGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCCGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAATG---CATGTCAGTTATTGACAGTGACCGACTTTTGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGAACA-GATCCTGAGTTTGTGTAAAGAATATCATGGACAGATCCTAAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCATCATATAATT-GTCATCCTCACACTATAGTTCAAA-------------ACTT---T-----AGACAC---AGA-TAAAA---------ACAGGTT-T----TATC-----ATCACTACGGACAGTCTAC-CG-AGAGAG--CAGCCGCTTAACCAGGACTTTAATACGTT---GAGGGAAAGGGTGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGTAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TGAGCTCA--TGGAGACCACAGGCTCA----AGAGCTTTTCTGATCACTCGGT----------TAC--CGTTTGTCATTA-CATCTTTA-CTTGTAACCAAAAA
gi|130786 : ATATCTAAACATCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTGCAGAACTGACCTGTTCCCAACATATTCAGCTTGGAAAAATGACATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGATTTTGGAAACATCAGTGACTAGATATTTTGTATGAAGAATATCATGGACA-GATCCTGGGTTTGTGTGAAGAATATCATGGACAGATCCTGAGCCTGCAGGGAGGGACATACACTCG-----------TTCT-----AGTAAAGTGAATCACCATATA--T-GTCATCATCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---ATA-TACAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CA-AGAGAG--CAGCTACTAAACCCAGACTTTAATACGTT---GAGGGAAAGGGCATTGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGCAACAGAATAAATGATGTCT-GTTAAATGTTAATGCGGATGA-----TTT-TGAGCCTA--TGGAGGCCTCAGGCTCA----AGAGCTTTTCTGATCACTCAGTG----------AC--CGTTTGTCATTA-TCTCTTTA-CTTGTAACCAAAAA
gi|130787 : ATGTCCAA-CACTAATACTGTTCTCTGTGGTGATGCAGTGCTCTGAAATATCTGTATGCTGTACAGAACTGACCTGTTCCAAATATATTCAGCTTGGA------------------GTAAAAGG---CATATCAGTTATCGACAGTGACTGACTTTGTAAACATCAGTTGCTAGGTATTTTGTGTGAAGAATATCGTGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTACAGGGAAGGACATATACGCGTTTACTCTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAT---AGG-TAAAA---------ACAGGTA-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCACTAAACCCAGACTTTATTACGTT---GAGGGAAAGAGTGTGGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAGC-----AACTAATGACG-GTTAAATGTTATTGTCGATGG-----TTT-TGAGCTCG--TGGAGGCCACTGGCT----GAAGAGCTTTTCTGATCACTCAGTG----------AC--CGTTTGTCATTA-TCTTTTTA-CTTGTAACCAAAAA
gi|130788 : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTTCTCTGACAT--CTGTATGCTGTACAGAACTGACTTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGTGTAAAACG---CATGTCAGTTATGGATAGTGACT------------------GACT-------TTG---GAA--ACATCAGTGACAAGGT----ATTTTGTGTGAAGAATATCATGGCCAGATCCTGAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTAAAGTTCAAA-------------ACAT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGCTTAT-CG-AGAGAG--CAGCCACTAAACCCAGACTTTAATATGTT---GAGGGAAAGGGTGTTGACATTGCAATGATTTTATTTCAATAAAACTGAACGAAGGAAATGGAATGAATGATGACT-GTTCAATGTAATTGTGGATGA-----TTT-TGAGCTCG--TGGAGGCCATACACTCA----AGAGCTTTACTGAACACTCAGTG----------AC--CGTTTGTCATTA-TCTTTTTTACTTGTAACCAAAAA
gi|130789 : ATGTTTAAACACCAATACTGTTATATATGGTGATGCAATGCTCTGACATATCTGTATACTGTACAGAACTGACCTGTTTCCAACATATTCAGCTTGG-AAAATGATATTGACAAGAGTAAAAGGAAACAT------------CAGTGACT----------------------AGGTATTTTGTGTGAAGAATATCATTGACA-GATCCTGAGTTTGTGTGAAGAATATTATGGACAGATCCTGAGTTTGT-GTGAAGAATATA
gi|130790 : GCCTGCAGTAA-----ATATTATCGCTT-CTTATTCTTTC-----GGTAAAGTACATCACCATATAGGT-GGTATCCTCGCGCTA-----CAAA-------------ACattgacagaacctgagtctgaagggagggacatatactcgtttgctttttcttctagtaaagtgcatcaccatataattgtcattctcacactatagttcaaaactttggacacagacaaaacaggttatatcatcgctactgacagtctttcgagagatcagccgctaaaccaaggatttaatacgttgagggaaagggtgttgacattgcaatgattttatttccataaggct
gi|130791 : TATAC--ATTTTCTTGTTCTTGTTTC--GGTTAAGTGCATCACCATTTAAGA-GGCTTTCTTGCACTGAAGTTTAAA-------------ACTT---A-----GGACACGTGAGG-GAAGACCCCTATGTACAGGCT-AAATATATGTTAAAATCGCTACTGACAATCTATACGTTGAGAG--CCGCTGCC-ACCCTAGATTGGAATGCGTC---ATGGTAAGGGGCGTTGACAATGC
gi|130792 : TCTTTTTCTTCTTCTTCTTCTTCGGTAAAGTGCATCACCATATAAGT-GGCATCCTTGTAATGTA
gi|130793 : CTTCTTCTTCC-----GGTAAAGTGCATTACAATATAAGT-GGTATCCTCGCACTGTA
gi|130794 : TTTTCTTTT-----GTGCATTTGGATCACCATATAATTTGGCATCCTCACAGTGTAGTTCAGACATGTGAGGGAGGGTTTATAT-----GCATGT---AGATTAAAA---------ACAGGTTAA----AAGC-----ATCACTACT---AGTCTAT-GG-AGGGAGACTAGCC
gi|130795 : TTCTTCC-----GGTAAAGTGAACCACCAT----CT-G-------CACACTGTAGTTTAAA-------------ACTT---GAGGGAGGATCC-----A-TAAGT---------ACAAGTTAA----AATC-----ATCACTACTGGCCGTCTATGTGTAGAGGG--CTGACACT-ATCCCAGATTTGAATGCATCACAGAGGG--GGGGGGGTGACAATGCcaaagac
gi|130796 : AAACTGAATACATTATGTGT-GGAAAATGGTGCT-------------TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCGCCTGGTGTCTGTCGTCCGT--CGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130797 : AATAATTGATTATTTGT--AGTGTTAGTTCAGCC-------TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCACCTGGTG---------TCCGTCGTCTGTCGTTA--ACTTTTAGCTTTTAAC
gi|130798 : aaTTCTGAATCA-----TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCGCTTGGTG---------TCCGTCGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130799 : aataagtcattcttgtATATTATTTTCGA--A-----TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAACTTTTGTGATCACCTGGTG---------CCCGTCGTCTGTCATTA--ACTTTTAGCTTTTAAC
gi|130800 : TTTTTGTGGGTGACTAATTTTATTAGCTCACCT--AAGCCAAAGGCTCACATGTGAGCTTTTGTGATCGCCTGGTGTC-------CAT--CGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130801 : TTATTTTG--TCA-----TTT-TTAGCTCATATGA--GCCAAAGGCTCACAGATGAGTTTTTGTGACAGCCTGGTG---------TCCGTCGTCTGTCATTA--ACTTTTAGCTTCTAAC
gi|130802 : TAA-----TTT-TAAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTATGATCGCCTGGTGTC-------CAT--CGTCTGTCAT
gi|130803 : GCTCG--TGGAGGCCACAGACTCA----AGAGCTTTTCTGATCACTCAGTG----------AC--CGTTTGTCATTATCATTTT
Alignments
lowQualScore : 111 11111 2222222222222 111111111 111111111 111111 11111 222 11 11111 4444444444 22 1
lowQualScore : 0 1 0 000 4 55 5 0 0 5 0 44444 2 3 5 2222222222222 555555555 777 4 777777777 555555 11111 8 8 66 6 5 888 6 7 5 5 0 2 2 77777 3 1 111 33 1 99999 1 0 1111111111 33 1 11 2 1
lowQualScore : . . . ... . .. . . . . . ..... . . . ............. ......... ... . ......... ...... ..... . . .. . . ... . . . . . . . ..... . . ... .. . ..... . . .......... .. . .. . .
lowQualScore : 3 9 7 000 3 00 7 2 9 7 5 22222 2 3 1 0000000000000 444444444 888 4 888888888 111111 11111 9 9 11 5 0 888 2 4 3 0 4 5 8 77777 1 0 999 99 0 11111 0 3 2222222222 99 4 11 2 0
consensus : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTGCAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT-----GGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCGCTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TNAGCTCGCCTGGAGGCCANAGGCTCACAGGNGAGCTTTTNTGATCGCCCGGTGTC-------CAC--CGTCTGTCGTTA-CACTTTTAGCTTNTAACCAAAAA
Reference ( family-801 ) : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTGCAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT-----GGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCGCTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TNAGCTCGCCTGGAGGCCANAGGCTCACAGGNGAGCTTTTNTGATCGCCCGGTG---------CAC--CGTCTGTCGTTA-CACTTTTAGCTTNTAACCAAAAA
gi|130783 : ATGTCTAAACACCAATACTGTTCTCTGTAGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAATG---CATGTCAGTTATTGACAGTGACTGACTTTTGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGAACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTAAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----AGACAC---AGA-TAAAA---------ACAGGTT-T----TATT-----ATCGCTACTGACAGTCTAC-CG-AGAGAG--CAGCCGCTAAACCA-GGACTTTAATACGTT---GAGGGAAAGGGTGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TGAGCTCA--TGGAGGCCACAGGCTC----GAGAGCTTTTCTGATCACTTGGT----------TAC--CGTTTGTCATTA-CATCTTTA-CTTGTAACCAAAAA
gi|130784 : ATGTCTAAACACCAATACTGTTTTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTCAAAAAATGAAAATGACAAGTGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTT-GTGTGAAAAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAAATCCTGAATCTGCAGGGAGGGACATATACTGGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACCT---T-----GGATAC---AAA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACCGACATTCTAT-CG-AGAGAG--CAGCCACTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGTGTTGACATTGAAATGATTTTATTTCCATAAGACTGAACGAAGGAAACAGAATAAATGATGACT-GTTAAATGTTACTGTGGATGA-----TTT-TGAGCTTG--TGGAGGCCACAGGCTCA----AGAGCTTTTCTGATCACTCAGTG----------AC--CGTTTGTCATTA-TCTCTTTA-CTTGCAACCAAAA
gi|130785 : ATGTCTAAACACCAATACTGTTCTCTGCGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCCGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAATG---CATGTCAGTTATTGACAGTGACCGACTTTTGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGAACA-GATCCTGAGTTTGTGTAAAGAATATCATGGACAGATCCTAAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCATCATATAATT-GTCATCCTCACACTATAGTTCAAA-------------ACTT---T-----AGACAC---AGA-TAAAA---------ACAGGTT-T----TATC-----ATCACTACGGACAGTCTAC-CG-AGAGAG--CAGCCGCTTAACCA-GGACTTTAATACGTT---GAGGGAAAGGGTGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGTAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TGAGCTCA--TGGAGACCACAGGCTCA----AGAGCTTTTCTGATCACTCGGT----------TAC--CGTTTGTCATTA-CATCTTTA-CTTGTAACCAAAAA
gi|130786 : ATATCTAAACATCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTGCAGAACTGACCTGTTCCCAACATATTCAGCTTGGAAAAATGACATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGATTTTGGAAACATCAGTGACTAGATATTTTGTATGAAGAATATCATGGACA-GATCCTGGGTTTGTGTGAAGAATATCATGGACAGATCCTGAGCCTGCAGGGAGGGACATACACTCG-----------TTCT-----AGTAAAGTGAATCACCATATA--T-GTCATCATCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---ATA-TACAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CA-AGAGAG--CAGCTACTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCATTGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGCAACAGAATAAATGATGTCT-GTTAAATGTTAATGCGGATGA-----TTT-TGAGCCTA--TGGAGGCCTCAGGCTCA----AGAGCTTTTCTGATCACTCAGTG----------AC--CGTTTGTCATTA-TCTCTTTA-CTTGTAACCAAAAA
gi|130787 : ATGTCCAA-CACTAATACTGTTCTCTGTGGTGATGCAGTGCTCTGAAATATCTGTATGCTGTACAGAACTGACCTGTTCCAAATATATTCAGCTTGGA------------------GTAAAAGG---CATATCAGTTATCGACAGTGACTGACTTTGTAAACATCAGTTGCTAGGTATTTTGTGTGAAGAATATCGTGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTACAGGGAAGGACATATACGCGTTTACTCTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAT---AGG-TAAAA---------ACAGGTA-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCACTAAACCC-AGACTTTATTACGTT---GAGGGAAAGAGTGTGGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAGC-----AACTAATGACG-GTTAAATGTTATTGTCGATGG-----TTT-TGAGCTCG--TGGAGGCCACTGGCT----GAAGAGCTTTTCTGATCACTCAGTG----------AC--CGTTTGTCATTA-TCTTTTTA-CTTGTAACCAAAAA
gi|130788 : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTTCTCTGACAT--CTGTATGCTGTACAGAACTGACTTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGTGTAAAACG---CATGTCAGTTATGGATAGTGACT------------------GACT-------TTG---GAA--ACATCAGTGACAAGGT----ATTTTGTGTGAAGAATATCATGGCCAGATCCTGAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTAAAGTTCAAA-------------ACAT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGCTTAT-CG-AGAGAG--CAGCCACTAAACCC-AGACTTTAATATGTT---GAGGGAAAGGGTGTTGACATTGCAATGATTTTATTTCAATAAAACTGAACGAAGGAAATGGAATGAATGATGACT-GTTCAATGTAATTGTGGATGA-----TTT-TGAGCTCG--TGGAGGCCATACACTCA----AGAGCTTTACTGAACACTCAGTG----------AC--CGTTTGTCATTA-TCTTTTTTACTTGTAACCAAAAA
gi|130789 : ATGTTTAAACACCAATACTGTTATATATGGTGATGCAATGCTCTGACATATCTGTATACTGTACAGAACTGACCTGTTTCCAACATATTCAGCTTGG-AAAATGATATTGACAAGAGTAAAAGGAAACAT------------CAGTGACT----------------------AGGTATTTTGTGTGAAGAATATCATTGACA-GATCCTGAGTTTGTGTGAAGAATATTATGGACAGATCCTGAGTTTGT-GTGAAGAATATA
gi|130790 : GCCTGCAGTAA-----ATATTATCGCTT-CTTATTCTTTC-----GGTAAAGTACATCACCATATAGGT-GGTATCCTCGCGCTA-----CAAA-------------ACattgacagaacctgagtctgaagggagggacatatactcgtttgctttttcttctagtaaagtgcatcaccatataattgtcattctcacactatagttcaaaactttggacacagacaaaacaggttatatcatcgctactgacagtctttcgagagatcagccgctaaaccaaggatttaatacgttgagggaaagggtgttgacattgcaatgattttatttccataaggct
gi|130791 : TATAC--ATTTTCTTGTTCTTGTTTC--GGTTAAGTGCATCACCATTTAAGA-GGCTTTCTTGCACTGAAGTTTAAA-------------ACTT---A-----GGACACGTGAGG-GAAGACCCCTATGTACAGGCT-AAATATATGTTAAAATCGCTACTGACAATCTATACGTTGAGAG--CCGCTGCC--ACCCTAGATTGGAATGCGTC---ATGGTAAGGGGCGTTGACAATGC
gi|130792 : TCTTTTTCTTCTTCTTCTTCTTCGGTAAAGTGCATCACCATATAAGT-GGCATCCTTGTAATGTA
gi|130793 : CTTCTTCTTCC-----GGTAAAGTGCATTACAATATAAGT-GGTATCCTCGCACTGTA
gi|130794 : TTTTCTTTT-----GTGCATTTGGATCACCATATAATTTGGCATCCTCACAGTGTAGTTCAGACATGTGAGGGAGGGTTTATAT-----GCATGT---AGATTAAAA---------ACAGGTTAA----AAGC-----ATCACTACT---AGTCTAT-GG-AGGGAGACTAGCC
gi|130795 : TTCTTCC-----GGTAAAGTGAACCACCAT----CT-G-------CACACTGTAGTTTAAA-------------ACTT---GAGGGAGGATCC-----A-TAAGT---------ACAAGTTAA----AATC-----ATCACTACTGGCCGTCTATGTGTAGAGGG--CTGACACT-ATCCC-AGATTTGAATGCATCACAGAGGGGGGGGG-GT-GACAATGCcaaagac
gi|130796 : AAACTGAATACATTATGTGT-GGAAAATGGTGCT-------------TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCGCCTGGTGTCTGTCGTCCGT--CGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130797 : AATAATTGATTATTTGT--AGTGTTAGTTCAGCC-------TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCACCTGGTGTC-------CGT--CGTCTGTCGTTA--ACTTTTAGCTTTTAAC
gi|130798 : aaTTCTGAATCA-----TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCGCTTGGTGTC-------CGT--CGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130799 : aataagtcattcttgtATATTATTTTCGA--A-----TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAACTTTTGTGATCACCTGGTG---------CCCGTCGTCTGTCATTA--ACTTTTAGCTTTTAAC
gi|130800 : TTTTTGTGGGTGACTAATTTTATTAGCTCACCT--AAGCCAAAGGCTCACATGTGAGCTTTTGTGATCGCCTGGTGTC-------CAT--CGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130801 : TTATTTTG--TCA-----TTT-TTAGCTCATATGA--GCCAAAGGCTCACAGATGAGTTTTTGTGACAGCCTGGTGTC-------CGT--CGTCTGTCATTA--ACTTTTAGCTTCTAAC
gi|130802 : TAA-----TTT-TAAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTATGATCGCCTGGTGTC-------CAT--CGTCTGTCAT
gi|130803 : GCTCG--TGGAGGCCACAGACTCA----AGAGCTTTTCTGATCACTCAGTG----------AC--CGTTTGTCATTATCATTTT
Alignments
lowQualScore : 111 11111 2222222222222 111111111 111111111 111111 11111 222 11 11111 22222222222 22 1
lowQualScore : 0 1 0 000 4 55 5 0 0 5 0 44444 2 3 5 2222222222222 555555555 777 4 777777777 555555 11111 8 8 66 6 5 888 6 7 5 5 0 2 2 77777 3 1 111 33 1 99999 1 0 33333333333 1 11 2 1
lowQualScore : . . . ... . .. . . . . . ..... . . . ............. ......... ... . ......... ...... ..... . . .. . . ... . . . . . . . ..... . . ... .. . ..... . . ........... . .. . .
lowQualScore : 3 9 7 000 3 00 7 2 9 7 5 22222 2 3 1 0000000000000 444444444 888 4 888888888 111111 11111 9 9 11 5 0 888 2 4 3 0 4 5 8 77777 1 0 999 99 0 11111 0 3 11111111111 4 11 2 0
consensus : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTGCAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT-----GGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCGCTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TNAGCTCGCCTGGAGGCCANAGGCTCACAGGNGAGCTTTTNTGATCGCCCGGT-------GTCCACCGTCTGTCGTTA-CACTTTTAGCTTNTAACCAAAAA
Reference ( family-801 ) : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTGCAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT-----GGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCGCTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TNAGCTCGCCTGGAGGCCANAGGCTCACAGGNGAGCTTTTNTGATCGCCCGGT-------GTCCACCGTCTGTCGTTA-CACTTTTAGCTTNTAACCAAAAA
gi|130783 : ATGTCTAAACACCAATACTGTTCTCTGTAGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAATG---CATGTCAGTTATTGACAGTGACTGACTTTTGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGAACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTAAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----AGACAC---AGA-TAAAA---------ACAGGTT-T----TATT-----ATCGCTACTGACAGTCTAC-CG-AGAGAG--CAGCCGCTAAACCA-GGACTTTAATACGTT---GAGGGAAAGGGTGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TGAGCTCA--TGGAGGCCACAGGCTC----GAGAGCTTTTCTGATCACTTGGT----------TACCGTTTGTCATTA-CATCTTTA-CTTGTAACCAAAAA
gi|130784 : ATGTCTAAACACCAATACTGTTTTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTCAAAAAATGAAAATGACAAGTGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTT-GTGTGAAAAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAAATCCTGAATCTGCAGGGAGGGACATATACTGGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACCT---T-----GGATAC---AAA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACCGACATTCTAT-CG-AGAGAG--CAGCCACTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGTGTTGACATTGAAATGATTTTATTTCCATAAGACTGAACGAAGGAAACAGAATAAATGATGACT-GTTAAATGTTACTGTGGATGA-----TTT-TGAGCTTG--TGGAGGCCACAGGCTCA----AGAGCTTTTCTGATCACTCAGT-------G---ACCGTTTGTCATTA-TCTCTTTA-CTTGCAACCAAAA
gi|130785 : ATGTCTAAACACCAATACTGTTCTCTGCGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCCGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAATG---CATGTCAGTTATTGACAGTGACCGACTTTTGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGAACA-GATCCTGAGTTTGTGTAAAGAATATCATGGACAGATCCTAAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCATCATATAATT-GTCATCCTCACACTATAGTTCAAA-------------ACTT---T-----AGACAC---AGA-TAAAA---------ACAGGTT-T----TATC-----ATCACTACGGACAGTCTAC-CG-AGAGAG--CAGCCGCTTAACCA-GGACTTTAATACGTT---GAGGGAAAGGGTGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGTAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TGAGCTCA--TGGAGACCACAGGCTCA----AGAGCTTTTCTGATCACTCGGT----------TACCGTTTGTCATTA-CATCTTTA-CTTGTAACCAAAAA
gi|130786 : ATATCTAAACATCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTGCAGAACTGACCTGTTCCCAACATATTCAGCTTGGAAAAATGACATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGATTTTGGAAACATCAGTGACTAGATATTTTGTATGAAGAATATCATGGACA-GATCCTGGGTTTGTGTGAAGAATATCATGGACAGATCCTGAGCCTGCAGGGAGGGACATACACTCG-----------TTCT-----AGTAAAGTGAATCACCATATA--T-GTCATCATCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---ATA-TACAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CA-AGAGAG--CAGCTACTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCATTGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGCAACAGAATAAATGATGTCT-GTTAAATGTTAATGCGGATGA-----TTT-TGAGCCTA--TGGAGGCCTCAGGCTCA----AGAGCTTTTCTGATCACTCAGT-------G---ACCGTTTGTCATTA-TCTCTTTA-CTTGTAACCAAAAA
gi|130787 : ATGTCCAA-CACTAATACTGTTCTCTGTGGTGATGCAGTGCTCTGAAATATCTGTATGCTGTACAGAACTGACCTGTTCCAAATATATTCAGCTTGGA------------------GTAAAAGG---CATATCAGTTATCGACAGTGACTGACTTTGTAAACATCAGTTGCTAGGTATTTTGTGTGAAGAATATCGTGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTACAGGGAAGGACATATACGCGTTTACTCTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAT---AGG-TAAAA---------ACAGGTA-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCACTAAACCC-AGACTTTATTACGTT---GAGGGAAAGAGTGTGGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAGC-----AACTAATGACG-GTTAAATGTTATTGTCGATGG-----TTT-TGAGCTCG--TGGAGGCCACTGGCT----GAAGAGCTTTTCTGATCACTCAGT-------G---ACCGTTTGTCATTA-TCTTTTTA-CTTGTAACCAAAAA
gi|130788 : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTTCTCTGACAT--CTGTATGCTGTACAGAACTGACTTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGTGTAAAACG---CATGTCAGTTATGGATAGTGACT------------------GACT-------TTG---GAA--ACATCAGTGACAAGGT----ATTTTGTGTGAAGAATATCATGGCCAGATCCTGAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTAAAGTTCAAA-------------ACAT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGCTTAT-CG-AGAGAG--CAGCCACTAAACCC-AGACTTTAATATGTT---GAGGGAAAGGGTGTTGACATTGCAATGATTTTATTTCAATAAAACTGAACGAAGGAAATGGAATGAATGATGACT-GTTCAATGTAATTGTGGATGA-----TTT-TGAGCTCG--TGGAGGCCATACACTCA----AGAGCTTTACTGAACACTCAGT-------G---ACCGTTTGTCATTA-TCTTTTTTACTTGTAACCAAAAA
gi|130789 : ATGTTTAAACACCAATACTGTTATATATGGTGATGCAATGCTCTGACATATCTGTATACTGTACAGAACTGACCTGTTTCCAACATATTCAGCTTGG-AAAATGATATTGACAAGAGTAAAAGGAAACAT------------CAGTGACT----------------------AGGTATTTTGTGTGAAGAATATCATTGACA-GATCCTGAGTTTGTGTGAAGAATATTATGGACAGATCCTGAGTTTGT-GTGAAGAATATA
gi|130790 : GCCTGCAGTAA-----ATATTATCGCTT-CTTATTCTTTC-----GGTAAAGTACATCACCATATAGGT-GGTATCCTCGCGCTA-----CAAA-------------ACattgacagaacctgagtctgaagggagggacatatactcgtttgctttttcttctagtaaagtgcatcaccatataattgtcattctcacactatagttcaaaactttggacacagacaaaacaggttatatcatcgctactgacagtctttcgagagatcagccgctaaaccaaggatttaatacgttgagggaaagggtgttgacattgcaatgattttatttccataaggct
gi|130791 : TATAC--ATTTTCTTGTTCTTGTTTC--GGTTAAGTGCATCACCATTTAAGA-GGCTTTCTTGCACTGAAGTTTAAA-------------ACTT---A-----GGACACGTGAGG-GAAGACCCCTATGTACAGGCT-AAATATATGTTAAAATCGCTACTGACAATCTATACGTTGAGAG--CCGCTGCC--ACCCTAGATTGGAATGCGTC---ATGGTAAGGGGCGTTGACAATGC
gi|130792 : TCTTTTTCTTCTTCTTCTTCTTCGGTAAAGTGCATCACCATATAAGT-GGCATCCTTGTAATGTA
gi|130793 : CTTCTTCTTCC-----GGTAAAGTGCATTACAATATAAGT-GGTATCCTCGCACTGTA
gi|130794 : TTTTCTTTT-----GTGCATTTGGATCACCATATAATTTGGCATCCTCACAGTGTAGTTCAGACATGTGAGGGAGGGTTTATAT-----GCATGT---AGATTAAAA---------ACAGGTTAA----AAGC-----ATCACTACT---AGTCTAT-GG-AGGGAGACTAGCC
gi|130795 : TTCTTCC-----GGTAAAGTGAACCACCAT----CT-G-------CACACTGTAGTTTAAA-------------ACTT---GAGGGAGGATCC-----A-TAAGT---------ACAAGTTAA----AATC-----ATCACTACTGGCCGTCTATGTGTAGAGGG--CTGACACT-ATCCC-AGATTTGAATGCATCACAGAGGGGGGGGG-GT-GACAATGCcaaagac
gi|130796 : AAACTGAATACATTATGTGT-GGAAAATGGTGCT-------------TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCGCCTGGTGTCTGTCGTCCGTCGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130797 : AATAATTGATTATTTGT--AGTGTTAGTTCAGCC-------TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCACCTGGT-------GTCCGTCGTCTGTCGTTA--ACTTTTAGCTTTTAAC
gi|130798 : aaTTCTGAATCA-----TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCGCTTGGT-------GTCCGTCGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130799 : aataagtcattcttgtATATTATTTTCGA--A-----TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAACTTTTGTGATCACCTGGT-------GCCCGTCGTCTGTCATTA--ACTTTTAGCTTTTAAC
gi|130800 : TTTTTGTGGGTGACTAATTTTATTAGCTCACCT--AAGCCAAAGGCTCACATGTGAGCTTTTGTGATCGCCTGGT-------GTCCATCGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130801 : TTATTTTG--TCA-----TTT-TTAGCTCATATGA--GCCAAAGGCTCACAGATGAGTTTTTGTGACAGCCTGGT-------GTCCGTCGTCTGTCATTA--ACTTTTAGCTTCTAAC
gi|130802 : TAA-----TTT-TAAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTATGATCGCCTGGT-------GTCCATCGTCTGTCAT
gi|130803 : GCTCG--TGGAGGCCACAGACTCA----AGAGCTTTTCTGATCACTCAGT-------G---ACCGTTTGTCATTATCATTTT
Alignments
lowQualScore : 111 11111 2222222222222 111111111 111111111 111111 11111 222 11 11111 22222222222 22 1
lowQualScore : 0 1 0 000 4 55 5 0 0 5 0 44444 2 3 5 2222222222222 555555555 777 4 777777777 555555 11111 8 8 66 6 5 888 6 7 5 5 0 2 2 77777 3 1 111 33 1 99999 1 0 33333333333 1 11 2 1
lowQualScore : . . . ... . .. . . . . . ..... . . . ............. ......... ... . ......... ...... ..... . . .. . . ... . . . . . . . ..... . . ... .. . ..... . . ........... . .. . .
lowQualScore : 3 9 7 000 3 00 7 2 9 7 5 22222 2 3 1 0000000000000 444444444 888 4 888888888 111111 11111 9 9 11 5 0 888 2 4 3 0 4 5 8 77777 1 0 999 99 0 11111 0 3 11111111111 4 11 2 0
consensus : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTGCAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT-----GGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCGCTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TNAGCTCGCCTGGAGGCCANAGGCTCACAGGNGAGCTTTTNTGATCGCCCGGT-------GTCCACCGTCTGTCGTTA-CACTTTTAGCTTNTAACCAAAAA
Reference ( family-801 ) : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTGCAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT-----GGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCGCTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TNAGCTCGCCTGGAGGCCANAGGCTCACAGGNGAGCTTTTNTGATCGCCCGGT-------GTCCACCGTCTGTCGTTA-CACTTTTAGCTTNTAACCAAAAA
gi|130783 : ATGTCTAAACACCAATACTGTTCTCTGTAGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAATG---CATGTCAGTTATTGACAGTGACTGACTTTTGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGAACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTAAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----AGACAC---AGA-TAAAA---------ACAGGTT-T----TATT-----ATCGCTACTGACAGTCTAC-CG-AGAGAG--CAGCCGCTAAACCA-GGACTTTAATACGTT---GAGGGAAAGGGTGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TGAGCTCA--TGGAGGCCACAGGCTC----GAGAGCTTTTCTGATCACTTGGT----------TACCGTTTGTCATTA-CATCTTTA-CTTGTAACCAAAAA
gi|130784 : ATGTCTAAACACCAATACTGTTTTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTCAAAAAATGAAAATGACAAGTGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTT-GTGTGAAAAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAAATCCTGAATCTGCAGGGAGGGACATATACTGGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACCT---T-----GGATAC---AAA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACCGACATTCTAT-CG-AGAGAG--CAGCCACTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGTGTTGACATTGAAATGATTTTATTTCCATAAGACTGAACGAAGGAAACAGAATAAATGATGACT-GTTAAATGTTACTGTGGATGA-----TTT-TGAGCTTG--TGGAGGCCACAGGCTCA----AGAGCTTTTCTGATCACTCAGT-------G---ACCGTTTGTCATTA-TCTCTTTA-CTTGCAACCAAAA
gi|130785 : ATGTCTAAACACCAATACTGTTCTCTGCGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCCGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAATG---CATGTCAGTTATTGACAGTGACCGACTTTTGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGAACA-GATCCTGAGTTTGTGTAAAGAATATCATGGACAGATCCTAAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCATCATATAATT-GTCATCCTCACACTATAGTTCAAA-------------ACTT---T-----AGACAC---AGA-TAAAA---------ACAGGTT-T----TATC-----ATCACTACGGACAGTCTAC-CG-AGAGAG--CAGCCGCTTAACCA-GGACTTTAATACGTT---GAGGGAAAGGGTGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGTAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TGAGCTCA--TGGAGACCACAGGCTCA----AGAGCTTTTCTGATCACTCGGT----------TACCGTTTGTCATTA-CATCTTTA-CTTGTAACCAAAAA
gi|130786 : ATATCTAAACATCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTGCAGAACTGACCTGTTCCCAACATATTCAGCTTGGAAAAATGACATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGATTTTGGAAACATCAGTGACTAGATATTTTGTATGAAGAATATCATGGACA-GATCCTGGGTTTGTGTGAAGAATATCATGGACAGATCCTGAGCCTGCAGGGAGGGACATACACTCG-----------TTCT-----AGTAAAGTGAATCACCATATA--T-GTCATCATCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---ATA-TACAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CA-AGAGAG--CAGCTACTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCATTGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGCAACAGAATAAATGATGTCT-GTTAAATGTTAATGCGGATGA-----TTT-TGAGCCTA--TGGAGGCCTCAGGCTCA----AGAGCTTTTCTGATCACTCAGT-------G---ACCGTTTGTCATTA-TCTCTTTA-CTTGTAACCAAAAA
gi|130787 : ATGTCCAA-CACTAATACTGTTCTCTGTGGTGATGCAGTGCTCTGAAATATCTGTATGCTGTACAGAACTGACCTGTTCCAAATATATTCAGCTTGGA------------------GTAAAAGG---CATATCAGTTATCGACAGTGACTGACTTTGTAAACATCAGTTGCTAGGTATTTTGTGTGAAGAATATCGTGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTACAGGGAAGGACATATACGCGTTTACTCTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAT---AGG-TAAAA---------ACAGGTA-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCACTAAACCC-AGACTTTATTACGTT---GAGGGAAAGAGTGTGGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAGC-----AACTAATGACG-GTTAAATGTTATTGTCGATGG-----TTT-TGAGCTCG--TGGAGGCCACTGGCT----GAAGAGCTTTTCTGATCACTCAGT-------G---ACCGTTTGTCATTA-TCTTTTTA-CTTGTAACCAAAAA
gi|130788 : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTTCTCTGACAT--CTGTATGCTGTACAGAACTGACTTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGTGTAAAACG---CATGTCAGTTATGGATAGTGACT------------------GACT-------TTG---GAA--ACATCAGTGACAAGGT----ATTTTGTGTGAAGAATATCATGGCCAGATCCTGAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTAAAGTTCAAA-------------ACAT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGCTTAT-CG-AGAGAG--CAGCCACTAAACCC-AGACTTTAATATGTT---GAGGGAAAGGGTGTTGACATTGCAATGATTTTATTTCAATAAAACTGAACGAAGGAAATGGAATGAATGATGACT-GTTCAATGTAATTGTGGATGA-----TTT-TGAGCTCG--TGGAGGCCATACACTCA----AGAGCTTTACTGAACACTCAGT-------G---ACCGTTTGTCATTA-TCTTTTTTACTTGTAACCAAAAA
gi|130789 : ATGTTTAAACACCAATACTGTTATATATGGTGATGCAATGCTCTGACATATCTGTATACTGTACAGAACTGACCTGTTTCCAACATATTCAGCTTGG-AAAATGATATTGACAAGAGTAAAAGGAAACAT------------CAGTGACT----------------------AGGTATTTTGTGTGAAGAATATCATTGACA-GATCCTGAGTTTGTGTGAAGAATATTATGGACAGATCCTGAGTTTGT-GTGAAGAATATA
gi|130790 : GCCTGCAGTAA-----ATATTATCGCTT-CTTATTCTTTC-----GGTAAAGTACATCACCATATAGGT-GGTATCCTCGCGCTA-----CAAA-------------ACattgacagaacctgagtctgaagggagggacatatactcgtttgctttttcttctagtaaagtgcatcaccatataattgtcattctcacactatagttcaaaactttggacacagacaaaacaggttatatcatcgctactgacagtctttcgagagatcagccgctaaaccaaggatttaatacgttgagggaaagggtgttgacattgcaatgattttatttccataaggct
gi|130791 : TATAC--ATTTTCTTGTTCTTGTTTC--GGTTAAGTGCATCACCATTTAAGA-GGCTTTCTTGCACTGAAGTTTAAA-------------ACTT---A-----GGACACGTGAGG-GAAGACCCCTATGTACAGGCT-AAATATATGTTAAAATCGCTACTGACAATCTATACGTTGAGAG--CCGCTGCC--ACCCTAGATTGGAATGCGTC---ATGGTAAGGGGCGTTGACAATGC
gi|130792 : TCTTTTTCTTCTTCTTCTTCTTCGGTAAAGTGCATCACCATATAAGT-GGCATCCTTGTAATGTA
gi|130793 : CTTCTTCTTCC-----GGTAAAGTGCATTACAATATAAGT-GGTATCCTCGCACTGTA
gi|130794 : TTTTCTTTT-----GTGCATTTGGATCACCATATAATTTGGCATCCTCACAGTGTAGTTCAGACATGTGAGGGAGGGTTTATAT-----GCATGT---AGATTAAAA---------ACAGGTTAA----AAGC-----ATCACTACT---AGTCTAT-GG-AGGGAGACTAGCC
gi|130795 : TTCTTCC-----GGTAAAGTGAACCACCAT----CT-G-------CACACTGTAGTTTAAA-------------ACTT---GAGGGAGGATCC-----A-TAAGT---------ACAAGTTAA----AATC-----ATCACTACTGGCCGTCTATGTGTAGAGGG--CTGACACT-ATCCC-AGATTTGAATGCATCACAGAGGGGGGGGG-GT-GACAATGCcaaagac
gi|130796 : AAACTGAATACATTATGTGT-GGAAAATGGTGCT-------------TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCGCCTGGTGTCTGTCGTCCGTCGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130797 : AATAATTGATTATTTGT--AGTGTTAGTTCAGCC-------TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCACCTGGT-------GTCCGTCGTCTGTCGTTA--ACTTTTAGCTTTTAAC
gi|130798 : aaTTCTGAATCA-----TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCGCTTGGT-------GTCCGTCGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130799 : aataagtcattcttgtATATTATTTTCGA--A-----TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAACTTTTGTGATCACCTGGT-------GCCCGTCGTCTGTCATTA--ACTTTTAGCTTTTAAC
gi|130800 : TTTTTGTGGGTGACTAATTTTATTAGCTCACCT--AAGCCAAAGGCTCACATGTGAGCTTTTGTGATCGCCTGGT-------GTCCATCGTCTGTCGTTA--ACTTTTAGCTTCTAAC
gi|130801 : TTATTTTG--TCA-----TTT-TTAGCTCATATGA--GCCAAAGGCTCACAGATGAGTTTTTGTGACAGCCTGGT-------GTCCGTCGTCTGTCATTA--ACTTTTAGCTTCTAAC
gi|130802 : TAA-----TTT-TAAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTATGATCGCCTGGT-------GTCCATCGTCTGTCAT
gi|130803 : GCTCG--TGGAGGCCACAGACTCA----AGAGCTTTTCTGATCACTCAGT-------G---ACCGTTTGTCATTATCATTTT
blockSeqs : T AAA G GG A G TCTTC T T T CATGTGAGGGAGG GAGGGA GTG T CCCCTATGT AAATA TTAAA A T AC A T ACA T T A T G G CTAAT A G ACC AG C CAGGT C GTCTGTCGTCC A TC A G
blockSeqs : A . G TG . G TTC T . T . ATAT . . . AA . G T . T . . T C G . G G . . G ACC AG C CAGGT C GTCC A T G G
blockSeqs : A . G GG . A . T . T . T . . . AA . . . . A . . C T A . G G . . G ACC AG C CAGGT C GTCC A C G G
blockSeqs : T . G GT . G . T . T . T . . . A . . . . A . . T G G . G G . . G ACC AG C CAGGT C GCCC A T G G
blockSeqs : A . . . . T . G . T . T . . . T . . . . A . . T T T . G G . . G ACC AG T CATGT C GTCC A T G G
blockSeqs : . . . . . T . G . G . T . . . A . . . . . . . C T . . T C . . T ATA AA A CAGAT G GTCC G T G C
blockSeqs : . . G . G . T . . . A . . . . . . . . . . C G . . T ACC AG A CAGGT G GTCC G . G T
blockSeqs : . . G . G . A . . . A . . . . T C . . T G . A GAA G G G . . C
blockSeqs : . T . G . G A . . T A . A A G T A . . T
blockSeqs : . C . G T . . . T A . A A G G G . . C
blockSeqs : . . . . . . . . T G . A A G G A . . C
blockSeqs : . . . A G . A A A G A .
blockSeqs : G . C A C G A
blockSeqCons : ACC CAGGT T*
originalCons : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTGCAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT-----GGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCGCTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TNAGCTCGCCTGGAGGCCANAGGCTCACAGGNGAGCTTTTNTGATCGCCCGGT-------GTCCACCGTCTGTCGTTA-CACTTTTAGCTTNTAACCAAAAA
finalCons : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTGCAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT-----GGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCGCTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TNAGCTCACCTGGAGGCCANAGGCTCACAGGTGAGCTTTTNTGATCGCCCGGT-------GTCCACCGTCTGTCGTTAT-ACTTTTAGCTTNTAACCAAAAA
Alignments
lowQualScore : 111 11111 2222222222222 111111111 111111111 111111 11111 22 11 22222 22222222222 11 1
lowQualScore : 0 1 0 000 4 55 5 0 0 5 0 44444 2 3 5 2222222222222 555555555 777 4 777777777 555555 11111 8 8 66 6 5 888 6 7 5 5 0 2 2 77777 3 1 00 33 1 11111 1 0 33333333333 1 66 2 1
lowQualScore : . . . ... . .. . . . . . ..... . . . ............. ......... ... . ......... ...... ..... . . .. . . ... . . . . . . . ..... . . .. .. . ..... . . ........... . .. . .
lowQualScore : 3 9 7 000 3 00 7 2 9 7 5 22222 2 3 1 0000000000000 444444444 888 4 888888888 111111 11111 9 9 11 5 0 888 2 4 3 0 4 5 8 77777 1 0 44 99 0 88888 0 3 11111111111 4 22 2 0
consensus : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTGCAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT-----GGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCGCTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TNAGCTCGCCTGGAGGCCANAGGCTCACAGGTGAGCTTTTNTGATCGCCCGGT-------GTCCACCGTCTGTCGTTATACTTTTAGCTTNTAACCAAAAA
Reference ( family-801 ) : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTGCAGGGAGGGACATATACTCGTTTGCTTTTTCTTCT-----GGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCGCTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TNAGCTCACCTGGAGGCCANAGGCTCACAGGTGAGCTTTTNTGATCGCCCGGT-------GTCCACCGTCTGTCGTTATACTTTTAGCTTNTAACCAAAAA
gi|130783 : ATGTCTAAACACCAATACTGTTCTCTGTAGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAATG---CATGTCAGTTATTGACAGTGACTGACTTTTGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGAACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTAAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----AGACAC---AGA-TAAAA---------ACAGGTT-T----TATT-----ATCGCTACTGACAGTCTAC-CG-AGAGAG--CAGCCGCTAAACCA-GGACTTTAATACGTT---GAGGGAAAGGGTGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TGAGCTCA--TGGAGGCCACAGGCTC----GAGAGCTTTTCTGATCACTTGGT----------TACCGTTTGTCATTACATCTTTA-CTTGTAACCAAAAA
gi|130784 : ATGTCTAAACACCAATACTGTTTTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCTGTTCCCAATATATTCAGCTTCAAAAAATGAAAATGACAAGTGTAAAAGG---CATGTCAGTTATTGACAGTGACTGACTTTGGAAACATCAGTGACTAGGTATTT-GTGTGAAAAATATCATGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAAATCCTGAATCTGCAGGGAGGGACATATACTGGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACCT---T-----GGATAC---AAA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACCGACATTCTAT-CG-AGAGAG--CAGCCACTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGTGTTGACATTGAAATGATTTTATTTCCATAAGACTGAACGAAGGAAACAGAATAAATGATGACT-GTTAAATGTTACTGTGGATGA-----TTT-TGAGCTTG--TGGAGGCCACAGGCTCA-A---GAGCTTTTCTGATCACTCAGT-------G---ACCGTTTGTCATTATCTCTTTA-CTTGCAACCAAAA
gi|130785 : ATGTCTAAACACCAATACTGTTCTCTGCGGTGATGCAGTGCTCTGACATATCTGTATGCTGTACAGAACTGACCCGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGAGTAAAATG---CATGTCAGTTATTGACAGTGACCGACTTTTGAAACATCAGTGACTAGGTATTTTGTGTGAAGAATATCATGAACA-GATCCTGAGTTTGTGTAAAGAATATCATGGACAGATCCTAAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCATCATATAATT-GTCATCCTCACACTATAGTTCAAA-------------ACTT---T-----AGACAC---AGA-TAAAA---------ACAGGTT-T----TATC-----ATCACTACGGACAGTCTAC-CG-AGAGAG--CAGCCGCTTAACCA-GGACTTTAATACGTT---GAGGGAAAGGGTGTCGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGTAAACGGAATAAATGATGACT-GTTAAATGTTATTGTGGATGA-----TTT-TGAGCTCA--TGGAGACCACAGGCTCA-A---GAGCTTTTCTGATCACTCGGT----------TACCGTTTGTCATTACATCTTTA-CTTGTAACCAAAAA
gi|130786 : ATATCTAAACATCAATACTGTTCTCTGTGGTGATGCAGTGCTCTGACATATCTGTATGCTGTGCAGAACTGACCTGTTCCCAACATATTCAGCTTGGAAAAATGACATTGACAAGAGTAAAAGG---CATGTCAGTTATTGACAGTGACTGATTTTGGAAACATCAGTGACTAGATATTTTGTATGAAGAATATCATGGACA-GATCCTGGGTTTGTGTGAAGAATATCATGGACAGATCCTGAGCCTGCAGGGAGGGACATACACTCG-----------TTCT-----AGTAAAGTGAATCACCATATA--T-GTCATCATCGCACTATAGTTCAAA-------------ACTT---T-----GGACAC---ATA-TACAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGTCTAT-CA-AGAGAG--CAGCTACTAAACCC-AGACTTTAATACGTT---GAGGGAAAGGGCATTGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGCAACAGAATAAATGATGTCT-GTTAAATGTTAATGCGGATGA-----TTT-TGAGCCTA--TGGAGGCCTCAGGCTCA-A---GAGCTTTTCTGATCACTCAGT-------G---ACCGTTTGTCATTATCTCTTTA-CTTGTAACCAAAAA
gi|130787 : ATGTCCAA-CACTAATACTGTTCTCTGTGGTGATGCAGTGCTCTGAAATATCTGTATGCTGTACAGAACTGACCTGTTCCAAATATATTCAGCTTGGA------------------GTAAAAGG---CATATCAGTTATCGACAGTGACTGACTTTGTAAACATCAGTTGCTAGGTATTTTGTGTGAAGAATATCGTGGACA-GATCCTGAGTTTGTGTGAAGAATATCATGGACAGATCCTGAGTCTACAGGGAAGGACATATACGCGTTTACTCTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTATAGTTCAAA-------------ACTT---T-----GGACAT---AGG-TAAAA---------ACAGGTA-A----TATC-----ATCGCTACTGACAGTCTAT-CG-AGAGAG--CAGCCACTAAACCC-AGACTTTATTACGTT---GAGGGAAAGAGTGTGGACATTGCAATGATTTTATTTCCATAAGACTGAACGAAGGAAGC-----AACTAATGACG-GTTAAATGTTATTGTCGATGG-----TTT-TGAGCTCG--TGGAGGCCACTGGCT----GAAGAGCTTTTCTGATCACTCAGT-------G---ACCGTTTGTCATTATCTTTTTA-CTTGTAACCAAAAA
gi|130788 : ATGTCTAAACACCAATACTGTTCTCTGTGGTGATGCAGTTCTCTGACAT--CTGTATGCTGTACAGAACTGACTTGTTCCCAATATATTCAGCTTGGAAAAATGATATTGACAAGTGTAAAACG---CATGTCAGTTATGGATAGTGACT------------------GACT-------TTG---GAA--ACATCAGTGACAAGGT----ATTTTGTGTGAAGAATATCATGGCCAGATCCTGAGTCTGCAGGGAGGGACATATACTTGTTTGCTTTTTCTTCT-----AGTAAAGTGCATCACCATATAATT-GTCATCCTCGCACTAAAGTTCAAA-------------ACAT---T-----GGACAC---AGA-TAAAA---------ACAGGTT-A----TATC-----ATCGCTACTGACAGCTTAT-CG-AGAGAG--CAGCCACTAAACCC-AGACTTTAATATGTT---GAGGGAAAGGGTGTTGACATTGCAATGATTTTATTTCAATAAAACTGAACGAAGGAAATGGAATGAATGATGACT-GTTCAATGTAATTGTGGATGA-----TTT-TGAGCTCG--TGGAGGCCATACACTCA-A---GAGCTTTACTGAACACTCAGT-------G---ACCGTTTGTCATTATCTTTTTTACTTGTAACCAAAAA
gi|130789 : ATGTTTAAACACCAATACTGTTATATATGGTGATGCAATGCTCTGACATATCTGTATACTGTACAGAACTGACCTGTTTCCAACATATTCAGCTTGG-AAAATGATATTGACAAGAGTAAAAGGAAACAT------------CAGTGACT----------------------AGGTATTTTGTGTGAAGAATATCATTGACA-GATCCTGAGTTTGTGTGAAGAATATTATGGACAGATCCTGAGTTTGT-GTGAAGAATATA
gi|130790 : GCCTGCAGTAA-----ATATTATCGCTT-CTTATTCTTTC-----GGTAAAGTACATCACCATATAGGT-GGTATCCTCGCGCTA-----CAAA-------------ACattgacagaacctgagtctgaagggagggacatatactcgtttgctttttcttctagtaaagtgcatcaccatataattgtcattctcacactatagttcaaaactttggacacagacaaaacaggttatatcatcgctactgacagtctttcgagagatcagccgctaaaccaaggatttaatacgttgagggaaagggtgttgacattgcaatgattttatttccataaggct
gi|130791 : TATAC--ATTTTCTTGTTCTTGTTTC--GGTTAAGTGCATCACCATTTAAGA-GGCTTTCTTGCACTGAAGTTTAAA-------------ACTT---A-----GGACACGTGAGG-GAAGACCCCTATGTACAGGCT-AAATATATGTTAAAATCGCTACTGACAATCTATACGTTGAGAG--CCGCTGCC--ACCCTAGATTGGAATGCGTC---ATGGTAAGGGGCGTTGACAATGC
gi|130792 : TCTTTTTCTTCTTCTTCTTCTTCGGTAAAGTGCATCACCATATAAGT-GGCATCCTTGTAATGTA
gi|130793 : CTTCTTCTTCC-----GGTAAAGTGCATTACAATATAAGT-GGTATCCTCGCACTGTA
gi|130794 : TTTTCTTTT-----GTGCATTTGGATCACCATATAATTTGGCATCCTCACAGTGTAGTTCAGACATGTGAGGGAGGGTTTATAT-----GCATGT---AGATTAAAA---------ACAGGTTAA----AAGC-----ATCACTACT---AGTCTAT-GG-AGGGAGACTAGCC
gi|130795 : TTCTTCC-----GGTAAAGTGAACCACCAT----CT-G-------CACACTGTAGTTTAAA-------------ACTT---GAGGGAGGATCC-----A-TAAGT---------ACAAGTTAA----AATC-----ATCACTACTGGCCGTCTATGTGTAGAGGG--CTGACACT-ATCCC-AGATTTGAATGCATCACAGAGGGGGGGGG-GT-GACAATGCcaaagac
gi|130796 : AAACTGAATACATTATGTGT-GGAAAATGGTGCT-------------TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCGCCTGGTGTCTGTCGTCCGTCGTCTGTCGTTA-ACTTTTAGCTTCTAAC
gi|130797 : AATAATTGATTATTTGT--AGTGTTAGTTCAGCC-------TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCACCTGGT-------GTCCGTCGTCTGTCGTTA-ACTTTTAGCTTTTAAC
gi|130798 : aaTTCTGAATCA-----TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTGTGATCGCTTGGT-------GTCCGTCGTCTGTCGTTA-ACTTTTAGCTTCTAAC
gi|130799 : aataagtcattcttgtATATTATTTTCGA--A-----TTT-TTAGCTCACCTGA--GCCAAAGGCTCACAGGTGAACTTTTGTGATCACCTGGT-------GCCCGTCGTCTGTCATTA-ACTTTTAGCTTTTAAC
gi|130800 : TTTTTGTGGGTGACTAATTTTATTAGCTCACCT--AAGCCAAAGGCTCACATGTGAGCTTTTGTGATCGCCTGGT-------GTCCATCGTCTGTCGTTA-ACTTTTAGCTTCTAAC
gi|130801 : TTATTTTG--TCA-----TTT-TTAGCTCATATGA--GCCAAAGGCTCACAGATGAGTTTTTGTGACAGCCTGGT-------GTCCGTCGTCTGTCATTA-ACTTTTAGCTTCTAAC
gi|130802 : TAA-----TTT-TAAGCTCACCTGA--GCCAAAGGCTCACAGGTGAGCTTTTATGATCGCCTGGT-------GTCCATCGTCTGTCAT
gi|130803 : GCTCG--TGGAGGCCACAGACTCA-A---GAGCTTTTCTGATCACTCAGT-------G---ACCGTTTGTCATTATCATTTTA