lowQualScore : 11111 55555555555555555555555555555555555555555555555555555 4444444444 1111111 11
lowQualScore : 8 9 7 444 4 6 0 7 00000 1 6 0 99 4 66 999 0 333 99 3 7 0 6 77777777777777777777777777777777777777777777777777777 2 88 2 6 3 2 6666666666 333 2 1111111 22 77777 0 2 22 33 7777 66
lowQualScore : . . . ... . . . . ..... . . . .. . .. ... . ... .. . . . . ..................................................... . .. . . . . .......... ... . ....... .. ..... . . .. .. .... ..
lowQualScore : 9 4 4 555 0 8 6 2 66666 9 5 3 44 5 88 333 3 333 99 7 9 2 7 11111111111111111111111111111111111111111111111111111 0 11 2 7 6 1 9999999999 777 1 3333333 99 88888 4 4 88 22 2222 22
consensus : CTTATA-AATAAGNTTATT-A-TC-AANAAGAAAATTATANATATGTTTGN--ANAC-AANTCTTTCCANNANCTTN-CCAA-C-ACAGC---TTAAN-AGNGANATTGGTCTATAATT---------A--GA-----CGC--T--A--GG-----T-T--T-GTTTTA---CCTTTTT-TA-AA-A-AGNGGCAT-TAC---NA-G--NGCTGAT-TTCCA---TAANTCTGGA--AA--TTCACATT-CGATT--A-AC-GATCT-ATTAAATAA
Reference ( gi|51898 ) : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGT--ACAC-AATTCTTTCCATTAACTTG-CCAA-T-ACAGC---TTAAG-AGTGAAATTGGTCGATAATT---------A--GA-----CGC--T--A--GG-----T-T--T-GTTTTA---CCTTTTT-TG-AA-A-AGTGGCAT-TAC---TA-G--GGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATT-TGATT--A-AT-GATCT-ATTAAATAA
gi|51897 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGT--ACAC-AATTCTTTCCATTAACTTG-CCAA-T-ACAGC---TTAAG-AGTGAAATTGGTCGATAATT---------A--GA-----CGC--T--A--GG-----T-T--T-GTTTTA---CCTTTTT-TG-AA-A-AGTGGCAT-TAC---TA-G--GGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATT-TGATT--A-AT-GATCT-ATTAAATAA
gi|51896 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGT--ACAC-AATTCTTTCCATTAACTTG-CCAA-T-ACAGC---TTAAG-AGTGAAATTGGTCGATAATT---------A--GA-----CGC--T--A--GG-----T-T--T-GTTTTA---CCTTTTT-TG-AA-A-AGTGGCAT-TAC---TA-G--GGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATT-TGATT--A-AT-GATCT-ATTAAATAA
gi|51899 : CTTGTA-AATAAGGTTATC-A-TC-AATAAGAAAAGTATATATATGTTTGT--ACACAAAGTCTTTCCATTAACTTG-GGAA-T-ACAGC---TTAAA-A-------TGATTGATACTT---------A--GA-----CGC--C--A--GG-----T-T-------------------------------TGGCAT-TAC---TA-G--AGCTGAT-TTCCA---CAAATCTGGA--AA--TTCACATT-TAATT--A-AT-GATCT-TTTAAATAA
gi|51900 : CTTGTA-TACCAAGTTATT-A-GC-AACAAAAAAATTATAAATATGCTTGT--TAAC-AACTCTTTCCATTAATTTA-CCAA-C-ACAAC---TCAAT-AGTGTTATTTATCTATAATT---------A--GA-----CA------A--GG-----TAT--TAGTATTT---CCTTTTT-TT-AA-ATAGTGACAT-TAT---CA----AACTG---TTACAG--TAATTCTGGA--AA--TTTACATT-CGTAT--A-GT-GATTT-ATTA
gi|51901 : CTCGTA-TATCAAGTTATT-A-GC-AACAA-AAATTTTTAGATATGTTTGT--ATAC-AACAATTTACATCAATTTA-CCAA-C-ACAAC---TCAAA-AGTGTTATTGGCCTATAATT---------A--GA-----CGA--T--G--TA-----T-TACT-ATTT-----CCTTTT-----AATA-AGTGGCAT-TAT---CA-AACAGC--GT-TTCCA---TAATTCTGGA--AT--GTTACA-------T--A-AT-AATCTCACTGAACA
gi|51902 : CTTAAA-AATGAGATCATT-A-CT-ATTTAGATGATTATAAATGTGCTTGT--ATAC-AACTCTTTCAAA-AACTTTTCCAA-C-ACAAC---TCAAT-AAAGAAATCGGTCTATAATT---------A--GT-----TGT--A--A--CA-----T-T--T-GCACAT---CCCTTTT-TA-AA-C-AATGGCAT-GACATTT------GCAAAT-TTCCA---GCATTCTGGA--AA--GCAACACT-CACTT--A-GG-GATCT-ATTAAA
gi|51904 : TTGTA-AATTAGTTTATT-T-TC-AATCAGAAAATTATAAATATGTTTGT--AGAC-AACTCTTTCCATAAGTTTA-CCAA-C-ACAGC---TTAAT-AAAGATATTGGCCGATAATT---------A--GA-----TGG--C--A--CG-----T-T--T-GTTTGA---CCCTTCT-TA-AA-A-AGAGGCAT-TAC----A-GT-AGCTGAC-TTCCA---TGACTCTGGA--AA--TTTACATT-CAAGT--A-AG-GATTT-ATTAAATAA
gi|51903 : TTGTA-AATTAGTTTATT-T-TC-AATCAGAAAATTATAAATATGTTTGT--AGAC-AACTCTTTCCATAAGTTTA-CCAA-C-ACAGC---TTAAT-AAAGATATTGGCCGATAATT---------A--GA-----TGG--C--A--CG-----T-T--T-GTTTGA---CCCTTCT-TA-AA-A-AGAGGCAT-TAC----A-GT-AGCTGAC-TTCCA---TGACTCTGGA--AA--TTTACATT-CAAGT--A-AG-GATTT-ATTAAATAA
gi|51905 : TTATA-AATAAGTTTGTT-T-GC-ATGAAGAAAATTATAAATGTTTTTATAGACAC-AG--CGTTCCATTAATTAA-CCCA-A-GCAGC---TTAAA-AGGGATATTGGTCTGTAATTGCA------A--GA-----AAC--TGAA--GA-----A-T--C-G--------CCCTTTT-TG-AA-G-AGAGGCAT-TAC---CA-A--TGCAGAC-TTCCAGACTAA---TGGA--AACGTTTGAGTT-TG--T--A-AT-GATTT-ATTAAACAA
gi|51906 : TTATATAATAAA-TTATT-G-CT-AATTAAAAAATTATACAAATATTTGA--ACAC-TAATCTTTCCAATAATTTT-CCGG-TGAC-GC---TTAAT-AATGACACTGGTCTATAATT---------ACTAA-----CCA--T--G--GA-----T-T--T-ATCT-----CCTTTTT-TA-AA-T-ATAGGAAT-TACATTT------GCTGCT-TTCCA---CCTATCTGGA--AA--AATACTTTCTGA-T--A-GA-GAACG-ATTAAATAA
gi|51907 : TTATACAATAAA-TTGTT-ACTC-AAGAAGAAG-TTATACATATGTTTAA--AAAT-TATTCTTTCTAAAATCTTC-CCGA-C-ACAGC---TTAGC-AACGACACTGGTCTATAATT---------A--GA-----CG---------GA-----A-T--T-GACTTATCCCCTTTCT-TA-AA-A-ATAGGAGT-TAC---AT-G--GGCTATT-TTCCA---TGAGTTAGGG--AA--ATGGCTTT-CGG-T--A-ATAGAACG-ATTATATAA
gi|51908 : TTATA-AATCAAATTATT-A-TC-AAGAAAAAAGTTATACATATTCTTAA--AAAC-AAGCCTTTCAAAAAGTTTT-CCGA-C-ACAACTAATTAAA----GACACAGGTCTGTAATT---------T--GA-----CAC--C--AATGA-----C-T--T-GTCT-----CCCTTTT-TA-AA-A-ATAGGAGT-TACATTT------GC-AATCTTCCA---CAAATTGGGA--AA--
gi|51910 : TTATACAAT-AGTTGATTTG-TC-AAGAA-AAAGTTATACATATTTTTAA--AAAC-TTTTCTTTCAAGAATCTTT-CCAT-A-ACAGC---TTAAA-AGTGAAACGGGTCTATAATA---------A--GA-----AGT--T--A--A-----------C-GTTTTATCTCCCTTTT-TG-A
gi|51909 : TTGTA-AATAAGTTTATT-T-TCCAATCAGACAACTATAAATAAGTTTTA--AGAC-AACTCTTTCCATAAGTTTA-CCAA-C-TCATC---GTAAT-AAAGATATTGGCCGATAATT---------
gi|51911 : TTATACAAT-ATTTTATT-T-GT-AAGAAGAAAGTTGTACATGTGTTTA-----AT-TATTCTTTCAAATATCTTA-CCAC-A-ACAGC---T-AAGTAAAGAAATTGGTATATAGTT---------C--GA-----AGCTAT--A--GA-----C-T--T-G--TCA---CCTTTTT-Tttattacagaagctgacttctgtgattctggaaatttacattcaagtaaaaatgtattaaataa
gi|51912 : A-AATAAAATTAGT-A-TC-ACGAAAGAAATTATACATGTGTTTAA--AAAT-AAGTCTTTCAAACACTTTG-CCAATT-AC-GC---TTAAC-AGTGATATAGGTCTATAGTTATTAACCAAA--GA-------------A--GG------------GTCT-----CCTTTTT-TATAA-ACAGC-GCA--TAC---AA-A--TGCTTCT-TTCCA---GACTTTTGGG--AA--AACACTTT-TGGTC--AGAC-AAAC--GTTAAATAA
gi|51913 : A-GATAAAATTGGT-A-TC-ACGAAAGAAATTATACATGTGTTTAA--AAAT-AAGTCTTTCAAACACTTTG-CCAATT-AC-GC---TTAAC-AGTGATATAGGTCTATAGTT---------ATTAA-----C-C--A--A--GG-----A-A--G-GGTCTA---CCTTTTTATA-AA-C-AGC-GCA--TAC---AA-A--TGCTTCT-TTCCA---GACTTTTGGG--AA--AACACTTT-TAGTC--AGAC-AAAC--GTTAAATAA
gi|51914 : A-AATAAAATTAGT-A-TC-ACGAAAGAAATTATACATGTGTTTAA--AAAT-AAGTCTTTCAAACACTTTG-CCAATT-AC-GC---TTAAC-AGTGATATAGGTCTATAGTTATTAACCAAA--GA-------------A--GG------------GTCT-----CCTTTTT-T--AT-A-AACAGCACATAC---AA-A--TGCTTCT-TTTCA---GACTTTTGGG--AA--AACACTTT-TGGTC--AGAC-AAAC--GTTAAATAA
gi|51915 : ATAATGTTAT--G-TCTAGTGAAAAAGTTAAATATATGTTTAT--GAAT-AATTTTTTCCATAACCTTT-TCAA-T-GCAAC---AAAGA-AGAGAAATAGGACGATAATT---------G--AATACATCGA--A--A--GG-----G-T--C-GTTTT------TTTT-----AA-A-AATTGCAC-TAA---CATT--TGCAGTT-TTCCA---TTATTTTGGAACAG--TACGTGTT-TG-----A-ATGGATCT-GTTGAA
gi|51916 : TT-G-TC-AAGAAGAAA-TTATACATATTTTTAA--AAAC-TAATCTTTCAATAATCTTT-CCAC-A-ACAAC---TTAGA-AGTGAAACGGGTCTATAAAT---------A--AA-----AGT--T--A--A-----------C-GTTTTATCTCCCTTTT-TG-AA-A-ATTGGAGT-AAC---TT-G--AGCTTTC-TTCCA---TGAGTTTGGG--AA--
gi|51917 : AATTGTAAATATGTTTAA--AAAC-AACGGGCTCCATAACCTTC-CCTA-T-ACAAC---TGATA-AGGGACATTTGTCTACGATT---------A--GA-----GG------G--GGAGACTT-T--T-GCT------CCTTTTT-TT-AA-ACAGAGGCAT-TACATTT------GCTAAT-TTCCA---AGCATTTTGA--TA--T--ATATT-TTCTTGAA-GT-GATCG-ATTGAACAA
gi|51909 : AT-TAC---AG-A--AGCTGAC-TTCTG---TGATTCTGGA--AA--TTTACATT-CAAGT--A-AA-AATGT-ATTAAATAA
Alignments
lowQualScore : 44444444444444444444444444444444444444444444444444444 1111111 1111
lowQualScore : 8 0 33 333 3 1 0 1 22 1 1 1 22 1 1 999 1 1 1 22222222222222222222222222222222222222222222222222222 1 55 2 2 3333333 2 2 555 3 22 55555 2 77 33 3333 3
lowQualScore : . . .. ... . . . . .. . . . .. . . ... . . . ..................................................... . .. . . ....... . . ... . .. ..... . .. .. .... .
lowQualScore : 4 2 33 999 8 0 1 0 33 0 8 0 00 0 0 111 0 0 6 44444444444444444444444444444444444444444444444444444 9 77 1 0 8888888 9 0 555 0 88 88888 4 22 22 2222 9
consensus : CTTATA-AATAAGNTTATT-A-TC-AANAAGAAAATTATANATATGTTTGNAAAC-AANTCTTTCCATNANCTTNCCAA-C-ACAGCTTAANAGNGANATTGGTCTATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TAAAAAGNG-GCAT-TACNA-N--NGCTGAT-TTCCA---TAANTCTGGA--AA--TTCACATTC-GATT--A-AC-GATCTATTAAATAA
Reference ( family-777 ) : CTTATA-AATAAGNTTATT-A-TC-AANAAGAAAATTATANATATGTTTGNANAC-AANTCTTTCCANNANCTTNCCAA-C-ACAGCTTAANAGNGANATTGGTCTATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TAAAAAGNG-GCAT-TACNA-G--NGCTGAT-TTCCA---TAANTCTGGA--AA--TTCACATTC-GATT--A-AC-GATCTATTAAATAA
gi|51896 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-TACTA-G--GGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51897 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-TACTA-G--GGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51898 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-TACTA-G--GGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51899 : CTTGTA-AATAAGGTTATC-A-TC-AATAAGAAAAGTATATATATGTTTGTACACAAAGTCTTTCCATTAACTTGGGAA-T-ACAGCTTAAAA-TG--ATTG----ATACTT---------A--GA-----CGCC--A--G-G-----T-T--T---------------------------G-GCAT-TACTA-G--AGCTGAT-TTCCA---CAAATCTGGA--AA--TTCACATTT-AATT--A-AT-GATCTTTTAAATAA
gi|51900 : CTTGTA-TACCAAGTTATT-A-GC-AACAAAAAAATTATAAATATGCTTGTTAAC-AACTCTTTCCATTAATTTACCAA-C-ACAACTCAATAGTGTTATTTATCTATAATT---------A--GA-----CA----A--G-G-----TAT--TAGTATTTC---CTTTTTT-TAAATAGTG-ACAT-TATCA----AACTG---TTACAG--TAATTCTGGA--AA--TTTACATTC-GTAT--A-GT-GATTTATTA
gi|51901 : CTCGTA-TATCAAGTTATT-A-GC-AACAA-AAATTTTTAGATATGTTTGTATAC-AACAATTTACATCAATTTACCAA-C-ACAACTCAAAAGTGTTATTGGCCTATAATT---------A--GA-----CGAT--G--T-A-----T-TACT-AT-TT-----CC--TTT-TAATAAGTG-GCAT-TATCA-AACAGC--GT-TTCCA---TAATTCTGGA--AT--GTTACAT
gi|51902 : CTTAAA-AATGAGATCATT-A-CT-ATTTAGATGATTATAAATGTGCTTGTATAC-AACTCTTTCAAAAACTTTTCCAA-C-ACAACTCAATAAAGAAATCGGTCTATAATT---------A--GT-----TGTA--A--C-A-----T-T--T-GC-ACAT---CCCTTTT-TAAACAATG-GCAT-GACAT-T--TGCAAAT-TTCCA---GCATTCTGGA--AA--GCAACACTC-ACTT--A-GG-GATCTATTAAAaataatctcactgaaca
gi|51903 : TTGTA-AATTAGTTTATT-T-TC-AATCAGAAAATTATAAATATGTTTGTAGAC-AACTCTTTCCATAAGTTTACCAA-C-ACAGCTTAATAAAGATATTGGCCGATAATT---------A--GA-----TGGC--A--C-G-----T-T--T-GT-TTGA---CCCTTCT-TAAAAAGAG-GCAT-TACAG-T--AGCTGAC-TTCCA---TGACTCTGGA--AA--TTTACATTC-AAGT--A-AG-GATTTATTAAATAA
gi|51904 : TTGTA-AATTAGTTTATT-T-TC-AATCAGAAAATTATAAATATGTTTGTAGAC-AACTCTTTCCATAAGTTTACCAA-C-ACAGCTTAATAAAGATATTGGCCGATAATT---------A--GA-----TGGC--A--C-G-----T-T--T-GT-TTGA---CCCTTCT-TAAAAAGAG-GCAT-TACAG-T--AGCTGAC-TTCCA---TGACTCTGGA--AA--TTTACATTC-AAGT--A-AG-GATTTATTAAATAA
gi|51905 : TTATA-AATAAGTTTGTT-T-GC-ATGAAGAAAATTATAAATGTTTTTATAGAC-ACAGCGTTCCATTAATTAACCCA-A-GCAGCTTAAAAGGGATATTGGTCTGTAATTGCA------A--GA-----AACTGAA--G-A-----A-T--C-G---------CCCTTTT-TGAAGAGAG-GCAT-TACCA-A--TGCAGAC-TTCCAGACTAA---TGGA--AACGTTTGAGTTT-G--T--A-AT-GATTTATTAAACAA
gi|51906 : TTATATAATAA-ATTATT-G-CT-AATTAAAAAATTATACAAATATTTGAACAC-TAATCTTTCCAATAATTTTCCGG-TGAC-GCTTAATAATGACACTGGTCTATAATT---------ACTAA-----CCAT--G--G-A-----T-T--T-AT-CT-----CCTTTTT-TAAATATAG-GAAT-TACAT-T--TGCTGCT-TTCCA---CCTATCTGGA--AA--AATACTTTCTGA-T--A-GA-GAACGATTAAATAA
gi|51907 : TTATACAATAA-ATTGTT-ACTC-AAGAAGAAG-TTATACATATGTTTAAAAAT-TATTCTTTCTAAAATCTTCCCGA-C-ACAGCTTAGCAACGACACTGGTCTATAATT---------A--GA-----CG-------G-A-----A-T--T-GA-CTTATCCCCTTTCT-TAAAAATAG-GAGT-TACAT-G--GGCTATT-TTCCA---TGAGTTAGGG--AA--ATGGCTTTC-GG-T--A-ATAGAACGATTATATAA
gi|51908 : TTATA-AATCAAATTATT-A-TC-AAGAAAAAAGTTATACATATTCTTAAAAAC-AAGCCTTTCAAAAAGTTTTCCGA-C-ACAACTAATTAAAGACACAGGTCTGTAATT---------T--GA-----CACC--AATG-A-----C-T--T-GT-CT-----CCCTTTT-TAAAAATAG-GAGT-TACAT-T--TGC-AATCTTCCA---CAAATTGGGA--AA--
gi|51909 : TTGTA-AATAAGTTTATT-T-TCCAATCAGACAACTATAAATAAGTTTTAAGAC-AACTCTTTCCATAAGTTTACCAA-C-TCATCGTAATAAAGATATTGGCCGATAATT---------
gi|51909 : AT-TACAG-A--AGCTGAC-TTCTG---TGATTCTGGA--AA--TTTACATTC-AAGT--A-AA-AATGTATTAAATAAttattacagaagctgacttctgtgattctggaaatttacattcaagtaaaaatgtattaaataa
gi|51910 : ttgtaaataagtttattttccaatcagacaactataaataagttttaagacaactctttccataagtttaccaactcatcgtaataaagatattggccgataattttTTATACAATA-GTTGATTTG-TC-AAGAA-AAAGTTATACATATTTTTAAAAAC-TTTTCTTTCAAGAATCTTTCCAT-A-ACAGCTTAAAAGTGAAACGGGTCTATAATA---------A--GA-----AGTT--A--ACG-----T-T--T-TA-TCTC---CCTTTTT-
gi|51911 : TTATACAATA-TTTTATT-T-GT-AAGAAGAAAGTTGTACATGTGTTT---AAT-TATTCTTTCAAATATCTTACCAC-A-ACAGCTAAGTAAAGAAATTGGTATATAGTT---------C--GA-----AGCT--ATAG-A-----C-T--T-GT-C--A---CCTTTTT-Tga
gi|51912 : A-AATAAAATTAGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTTATTAACCAAA--GA-----------A--G-G------------GT-CT-----CCTTTTT-TATAAACAGCGCA--TACAA-A--TGCTTCT-TTCCA---GACTTTTGGG--AA--AACACTTTT-GGTC--AGAC-AAAC-GTTAAATAA
gi|51913 : A-GATAAAATTGGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTT---------ATTAA-----C-CA--A--G-G-----A-A--G-GG-TCTA---CCTTTTTATAAACAGC--GCA--TACAA-A--TGCTTCT-TTCCA---GACTTTTGGG--AA--AACACTTTT-AGTC--AGAC-AAAC-GTTAAATAA
gi|51914 : A-AATAAAATTAGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTTATTAACCAAA--GA-----------A--G-G------------GT-CT-----CCTTTTT-TATAAA-CA-GCACATACAA-A--TGCTTCT-TTTCA---GACTTTTGGG--AA--AACACTTTT-GGTC--AGAC-AAAC-GTTAAATAA
gi|51915 : ATAATGTTAT--G-TCTAGTGAAAAAGTTAAATATATGTTTATGAAT-AATTTTTTCCATAACCTTTTCAA-T-GCAACAAAGAAGAGAAATAGGACGATAATT---------G--AATACATCGAA--A--G-G-----G-T--C-GT-TTT--------TTT-TAAAAA-TT-GCAC-TAACATT--TGCAGTT-TTCCA---TTATTTTGGAACAG--TACGTGTTT-GAAT--G----GATCTGTTGAA
gi|51916 : TT-G-TC-AAGAAGAAA-TTATACATATTTTTAAAAAC-TAATCTTTCAATAATCTTTCCAC-A-ACAACTTAGAAGTGAAACGGGTCTATAAAT---------A--AA-----AGTT--A--A------------C-GT-TTTATCTCCCTTTT-TGAAAATTG-GAGT-AACTT-G--AGCTTTC-TTCCA---TGAGTTTGGG--AA--
gi|51917 : AATTGTAAATATGTTTAAAAAC-AACGGGCTCCATAACCTTCCCTA-T-ACAACTGATAAGGGACATTTGTCTACGATT---------A--GA-----GG----G--G-GAGACTT-T--T-GC-TC-----CTTTTTT-TAAACAGAG-GCAT-TACAT-T--TGCTAAT-TTCCA---AGCATTTTGA--TA--T--ATATTT-TCTTGAA-GT-GATCGATTGAACAA
Alignments
lowQualScore : 44444444444444444444444444444444444444444444444444444 1111
lowQualScore : 8 0 33 333 3 1 0 1 22 1 1 1 22 1 1 999 1 1 1 22222222222222222222222222222222222222222222222222222 1 55 2 2 8888888 2 2 555 3 22 55555 2 77 33 3333 3
lowQualScore : . . .. ... . . . . .. . . . .. . . ... . . . ..................................................... . .. . . ....... . . ... . .. ..... . .. .. .... .
lowQualScore : 4 2 33 999 8 0 1 0 33 5 8 0 55 0 0 111 0 0 6 44444444444444444444444444444444444444444444444444444 9 77 1 0 8888888 9 0 555 0 88 88888 4 22 22 2222 9
consensus : CTTATA-AATAAGNTTATT-A-TC-AANAAGAAAATTATANATATGTTTGNAAAC-AANTCTTTCCATNANCTTNCCAA-C-ACAGCTTAANAGNGANATTGGTCTATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TAAAAAGNG-GCAT-TAC--AA-NNGCTGAT-TTCCA---TAANTCTGGA--AA--TTCACATTC-GATT--A-AC-GATCTATTAAATAA
Reference ( family-777 ) : CTTATA-AATAAGNTTATT-A-TC-AANAAGAAAATTATANATATGTTTGNAAAC-AANTCTTTCCATNANCTTNCCAA-C-ACAGCTTAANAGNGANATTGGTCTATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TAAAAAGNG-GCAT-TAC--NA-NNGCTGAT-TTCCA---TAANTCTGGA--AA--TTCACATTC-GATT--A-AC-GATCTATTAAATAA
gi|51896 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-TAC--TA-GGGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51897 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-TAC--TA-GGGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51898 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-TAC--TA-GGGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51899 : CTTGTA-AATAAGGTTATC-A-TC-AATAAGAAAAGTATATATATGTTTGTACACAAAGTCTTTCCATTAACTTGGGAA-T-ACAGCTTAAAA-TG--ATTG----ATACTT---------A--GA-----CGCC--A--G-G-----T-T--T---------------------------G-GCAT-TAC--TA-GAGCTGAT-TTCCA---CAAATCTGGA--AA--TTCACATTT-AATT--A-AT-GATCTTTTAAATAA
gi|51900 : CTTGTA-TACCAAGTTATT-A-GC-AACAAAAAAATTATAAATATGCTTGTTAAC-AACTCTTTCCATTAATTTACCAA-C-ACAACTCAATAGTGTTATTTATCTATAATT---------A--GA-----CA----A--G-G-----TAT--TAGTATTTC---CTTTTTT-TAAATAGTG-ACAT-TAT--CA-AA-CTG---TTACAG--TAATTCTGGA--AA--TTTACATTC-GTAT--A-GT-GATTTATTA
gi|51901 : CTCGTA-TATCAAGTTATT-A-GC-AACAA-AAATTTTTAGATATGTTTGTATAC-AACAATTTACATCAATTTACCAA-C-ACAACTCAAAAGTGTTATTGGCCTATAATT---------A--GA-----CGAT--G--T-A-----T-TACT-AT-TT-----CC--TTT-TAATAAGTG-GCAT-TATCAAA-CAGC--GT-TTCCA---TAATTCTGGA--AT--GTTACAT
gi|51902 : CTTAAA-AATGAGATCATT-A-CT-ATTTAGATGATTATAAATGTGCTTGTATAC-AACTCTTTCAAAAACTTTTCCAA-C-ACAACTCAATAAAGAAATCGGTCTATAATT---------A--GT-----TGTA--A--C-A-----T-T--T-GC-ACAT---CCCTTTT-TAAACAATG-GCAT-GAC--AT-TTGCAAAT-TTCCA---GCATTCTGGA--AA--GCAACACTC-ACTT--A-GG-GATCTATTAAAaataatctcactgaaca
gi|51903 : TTGTA-AATTAGTTTATT-T-TC-AATCAGAAAATTATAAATATGTTTGTAGAC-AACTCTTTCCATAAGTTTACCAA-C-ACAGCTTAATAAAGATATTGGCCGATAATT---------A--GA-----TGGC--A--C-G-----T-T--T-GT-TTGA---CCCTTCT-TAAAAAGAG-GCAT-TAC--AG-TAGCTGAC-TTCCA---TGACTCTGGA--AA--TTTACATTC-AAGT--A-AG-GATTTATTAAATAA
gi|51904 : TTGTA-AATTAGTTTATT-T-TC-AATCAGAAAATTATAAATATGTTTGTAGAC-AACTCTTTCCATAAGTTTACCAA-C-ACAGCTTAATAAAGATATTGGCCGATAATT---------A--GA-----TGGC--A--C-G-----T-T--T-GT-TTGA---CCCTTCT-TAAAAAGAG-GCAT-TAC--AG-TAGCTGAC-TTCCA---TGACTCTGGA--AA--TTTACATTC-AAGT--A-AG-GATTTATTAAATAA
gi|51905 : TTATA-AATAAGTTTGTT-T-GC-ATGAAGAAAATTATAAATGTTTTTATAGAC-ACAGCGTTCCATTAATTAACCCA-A-GCAGCTTAAAAGGGATATTGGTCTGTAATTGCA------A--GA-----AACTGAA--G-A-----A-T--C-G---------CCCTTTT-TGAAGAGAG-GCAT-TAC--CA-ATGCAGAC-TTCCAGACTAA---TGGA--AACGTTTGAGTTT-G--T--A-AT-GATTTATTAAACAA
gi|51906 : TTATATAATAA-ATTATT-G-CT-AATTAAAAAATTATACAAATATTTGAACAC-TAATCTTTCCAATAATTTTCCGG-TGAC-GCTTAATAATGACACTGGTCTATAATT---------ACTAA-----CCAT--G--G-A-----T-T--T-AT-CT-----CCTTTTT-TAAATATAG-GAAT-TAC--AT-TTGCTGCT-TTCCA---CCTATCTGGA--AA--AATACTTTCTGA-T--A-GA-GAACGATTAAATAA
gi|51907 : TTATACAATAA-ATTGTT-ACTC-AAGAAGAAG-TTATACATATGTTTAAAAAT-TATTCTTTCTAAAATCTTCCCGA-C-ACAGCTTAGCAACGACACTGGTCTATAATT---------A--GA-----CG-------G-A-----A-T--T-GA-CTTATCCCCTTTCT-TAAAAATAG-GAGT-TAC--AT-GGGCTATT-TTCCA---TGAGTTAGGG--AA--ATGGCTTTC-GG-T--A-ATAGAACGATTATATAA
gi|51908 : TTATA-AATCAAATTATT-A-TC-AAGAAAAAAGTTATACATATTCTTAAAAAC-AAGCCTTTCAAAAAGTTTTCCGA-C-ACAACTAATTAAAGACACAGGTCTGTAATT---------T--GA-----CACC--AATG-A-----C-T--T-GT-CT-----CCCTTTT-TAAAAATAG-GAGT-TAC--AT-TTGC-AATCTTCCA---CAAATTGGGA--AA--
gi|51909 : TTGTA-AATAAGTTTATT-T-TCCAATCAGACAACTATAAATAAGTTTTAAGAC-AACTCTTTCCATAAGTTTACCAA-C-TCATCGTAATAAAGATATTGGCCGATAATT---------
gi|51909 : AT-TAC--AG-AAGCTGAC-TTCTG---TGATTCTGGA--AA--TTTACATTC-AAGT--A-AA-AATGTATTAAATAAttattacagaagctgacttctgtgattctggaaatttacattcaagtaaaaatgtattaaataa
gi|51910 : ttgtaaataagtttattttccaatcagacaactataaataagttttaagacaactctttccataagtttaccaactcatcgtaataaagatattggccgataattttTTATACAATA-GTTGATTTG-TC-AAGAA-AAAGTTATACATATTTTTAAAAAC-TTTTCTTTCAAGAATCTTTCCAT-A-ACAGCTTAAAAGTGAAACGGGTCTATAATA---------A--GA-----AGTT--A--ACG-----T-T--T-TA-TCTC---CCTTTTT-
gi|51911 : TTATACAATA-TTTTATT-T-GT-AAGAAGAAAGTTGTACATGTGTTT---AAT-TATTCTTTCAAATATCTTACCAC-A-ACAGCTAAGTAAAGAAATTGGTATATAGTT---------C--GA-----AGCT--ATAG-A-----C-T--T-GT-C--A---CCTTTTT-Tga
gi|51912 : A-AATAAAATTAGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTTATTAACCAAA--GA-----------A--G-G------------GT-CT-----CCTTTTT-TATAAACAGCGCA--TAC--AA-ATGCTTCT-TTCCA---GACTTTTGGG--AA--AACACTTTT-GGTC--AGAC-AAAC-GTTAAATAA
gi|51913 : A-GATAAAATTGGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTT---------ATTAA-----C-CA--A--G-G-----A-A--G-GG-TCTA---CCTTTTTATAAACAGC--GCA--TAC--AA-ATGCTTCT-TTCCA---GACTTTTGGG--AA--AACACTTTT-AGTC--AGAC-AAAC-GTTAAATAA
gi|51914 : A-AATAAAATTAGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTTATTAACCAAA--GA-----------A--G-G------------GT-CT-----CCTTTTT-TATAAA-CA-GCACATAC--AA-ATGCTTCT-TTTCA---GACTTTTGGG--AA--AACACTTTT-GGTC--AGAC-AAAC-GTTAAATAA
gi|51915 : ATAATGTTAT--G-TCTAGTGAAAAAGTTAAATATATGTTTATGAAT-AATTTTTTCCATAACCTTTTCAA-T-GCAACAAAGAAGAGAAATAGGACGATAATT---------G--AATACATCGAA--A--G-G-----G-T--C-GT-TTT--------TTT-TAAAAA-TT-GCAC-TAA--CATTTGCAGTT-TTCCA---TTATTTTGGAACAG--TACGTGTTT-GAAT--G----GATCTGTTGAA
gi|51916 : TT-G-TC-AAGAAGAAA-TTATACATATTTTTAAAAAC-TAATCTTTCAATAATCTTTCCAC-A-ACAACTTAGAAGTGAAACGGGTCTATAAAT---------A--AA-----AGTT--A--A------------C-GT-TTTATCTCCCTTTT-TGAAAATTG-GAGT-AAC--TT-GAGCTTTC-TTCCA---TGAGTTTGGG--AA--
gi|51917 : AATTGTAAATATGTTTAAAAAC-AACGGGCTCCATAACCTTCCCTA-T-ACAACTGATAAGGGACATTTGTCTACGATT---------A--GA-----GG----G--G-GAGACTT-T--T-GC-TC-----CTTTTTT-TAAACAGAG-GCAT-TAC--AT-TTGCTAAT-TTCCA---AGCATTTTGA--TA--T--ATATTT-TCTTGAA-GT-GATCGATTGAACAA
Alignments
lowQualScore : 44444444444444444444444444444444444444444444444444444 1111
lowQualScore : 8 0 33 333 3 1 0 1 22 1 1 1 22 1 1 999 1 1 1 22222222222222222222222222222222222222222222222222222 1 55 2 2 2 2 777777 2 2 555 3 22 55555 2 77 33 3333 3
lowQualScore : . . .. ... . . . . .. . . . .. . . ... . . . ..................................................... . .. . . . . ...... . . ... . .. ..... . .. .. .... .
lowQualScore : 4 2 33 999 8 0 1 0 33 5 8 0 55 0 0 111 0 0 6 44444444444444444444444444444444444444444444444444444 9 77 1 0 0 0 888888 9 0 555 0 88 88888 4 22 22 2222 9
consensus : CTTATA-AATAAGNTTATT-A-TC-AANAAGAAAATTATANATATGTTTGNAAAC-AANTCTTTCCATNANCTTNCCAA-C-ACAGCTTAANAGNGANATTGGTCTATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TAAAAAGNG-GCAT-T-A-C--ANNNGCTGAT-TTCCA---TAANTCTGGA--AA--TTCACATTC-GATT--A-AC-GATCTATTAAATAA
Reference ( family-777 ) : CTTATA-AATAAGNTTATT-A-TC-AANAAGAAAATTATANATATGTTTGNAAAC-AANTCTTTCCATNANCTTNCCAA-C-ACAGCTTAANAGNGANATTGGTCTATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TAAAAAGNG-GCAT-T-A-C--AANNGCTGAT-TTCCA---TAANTCTGGA--AA--TTCACATTC-GATT--A-AC-GATCTATTAAATAA
gi|51896 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-T-A-C--TAGGGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51897 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-T-A-C--TAGGGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51898 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-T-A-C--TAGGGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51899 : CTTGTA-AATAAGGTTATC-A-TC-AATAAGAAAAGTATATATATGTTTGTACACAAAGTCTTTCCATTAACTTGGGAA-T-ACAGCTTAAAA-TG--ATTG----ATACTT---------A--GA-----CGCC--A--G-G-----T-T--T---------------------------G-GCAT-T-A-C--TAGAGCTGAT-TTCCA---CAAATCTGGA--AA--TTCACATTT-AATT--A-AT-GATCTTTTAAATAA
gi|51900 : CTTGTA-TACCAAGTTATT-A-GC-AACAAAAAAATTATAAATATGCTTGTTAAC-AACTCTTTCCATTAATTTACCAA-C-ACAACTCAATAGTGTTATTTATCTATAATT---------A--GA-----CA----A--G-G-----TAT--TAGTATTTC---CTTTTTT-TAAATAGTG-ACAT-T-ATC--AAA--CTG---TTACAG--TAATTCTGGA--AA--TTTACATTC-GTAT--A-GT-GATTTATTA
gi|51901 : CTCGTA-TATCAAGTTATT-A-GC-AACAA-AAATTTTTAGATATGTTTGTATAC-AACAATTTACATCAATTTACCAA-C-ACAACTCAAAAGTGTTATTGGCCTATAATT---------A--GA-----CGAT--G--T-A-----T-TACT-AT-TT-----CC--TTT-TAATAAGTG-GCAT-T-A-TCAAACAGC--GT-TTCCA---TAATTCTGGA--AT--GTTACAT
gi|51902 : CTTAAA-AATGAGATCATT-A-CT-ATTTAGATGATTATAAATGTGCTTGTATAC-AACTCTTTCAAAAACTTTTCCAA-C-ACAACTCAATAAAGAAATCGGTCTATAATT---------A--GT-----TGTA--A--C-A-----T-T--T-GC-ACAT---CCCTTTT-TAAACAATG-GCAT-G-A-C--ATTTGCAAAT-TTCCA---GCATTCTGGA--AA--GCAACACTC-ACTT--A-GG-GATCTATTAAAaataatctcactgaaca
gi|51903 : TTGTA-AATTAGTTTATT-T-TC-AATCAGAAAATTATAAATATGTTTGTAGAC-AACTCTTTCCATAAGTTTACCAA-C-ACAGCTTAATAAAGATATTGGCCGATAATT---------A--GA-----TGGC--A--C-G-----T-T--T-GT-TTGA---CCCTTCT-TAAAAAGAG-GCAT-T-A-C--AGTAGCTGAC-TTCCA---TGACTCTGGA--AA--TTTACATTC-AAGT--A-AG-GATTTATTAAATAA
gi|51904 : TTGTA-AATTAGTTTATT-T-TC-AATCAGAAAATTATAAATATGTTTGTAGAC-AACTCTTTCCATAAGTTTACCAA-C-ACAGCTTAATAAAGATATTGGCCGATAATT---------A--GA-----TGGC--A--C-G-----T-T--T-GT-TTGA---CCCTTCT-TAAAAAGAG-GCAT-T-A-C--AGTAGCTGAC-TTCCA---TGACTCTGGA--AA--TTTACATTC-AAGT--A-AG-GATTTATTAAATAA
gi|51905 : TTATA-AATAAGTTTGTT-T-GC-ATGAAGAAAATTATAAATGTTTTTATAGAC-ACAGCGTTCCATTAATTAACCCA-A-GCAGCTTAAAAGGGATATTGGTCTGTAATTGCA------A--GA-----AACTGAA--G-A-----A-T--C-G---------CCCTTTT-TGAAGAGAG-GCAT-T-A-C--CAATGCAGAC-TTCCAGACTAA---TGGA--AACGTTTGAGTTT-G--T--A-AT-GATTTATTAAACAA
gi|51906 : TTATATAATAA-ATTATT-G-CT-AATTAAAAAATTATACAAATATTTGAACAC-TAATCTTTCCAATAATTTTCCGG-TGAC-GCTTAATAATGACACTGGTCTATAATT---------ACTAA-----CCAT--G--G-A-----T-T--T-AT-CT-----CCTTTTT-TAAATATAG-GAAT-T-A-C--ATTTGCTGCT-TTCCA---CCTATCTGGA--AA--AATACTTTCTGA-T--A-GA-GAACGATTAAATAA
gi|51907 : TTATACAATAA-ATTGTT-ACTC-AAGAAGAAG-TTATACATATGTTTAAAAAT-TATTCTTTCTAAAATCTTCCCGA-C-ACAGCTTAGCAACGACACTGGTCTATAATT---------A--GA-----CG-------G-A-----A-T--T-GA-CTTATCCCCTTTCT-TAAAAATAG-GAGT-T-A-C--ATGGGCTATT-TTCCA---TGAGTTAGGG--AA--ATGGCTTTC-GG-T--A-ATAGAACGATTATATAA
gi|51908 : TTATA-AATCAAATTATT-A-TC-AAGAAAAAAGTTATACATATTCTTAAAAAC-AAGCCTTTCAAAAAGTTTTCCGA-C-ACAACTAATTAAAGACACAGGTCTGTAATT---------T--GA-----CACC--AATG-A-----C-T--T-GT-CT-----CCCTTTT-TAAAAATAG-GAGT-T-A-C--ATTTGC-AATCTTCCA---CAAATTGGGA--AA--
gi|51909 : TTGTA-AATAAGTTTATT-T-TCCAATCAGACAACTATAAATAAGTTTTAAGAC-AACTCTTTCCATAAGTTTACCAA-C-TCATCGTAATAAAGATATTGGCCGATAATT---------
gi|51909 : AT-T-A-C--AGAAGCTGAC-TTCTG---TGATTCTGGA--AA--TTTACATTC-AAGT--A-AA-AATGTATTAAATAAttattacagaagctgacttctgtgattctggaaatttacattcaagtaaaaatgtattaaataa
gi|51910 : ttgtaaataagtttattttccaatcagacaactataaataagttttaagacaactctttccataagtttaccaactcatcgtaataaagatattggccgataattttTTATACAATA-GTTGATTTG-TC-AAGAA-AAAGTTATACATATTTTTAAAAAC-TTTTCTTTCAAGAATCTTTCCAT-A-ACAGCTTAAAAGTGAAACGGGTCTATAATA---------A--GA-----AGTT--A--ACG-----T-T--T-TA-TCTC---CCTTTTT-
gi|51911 : TTATACAATA-TTTTATT-T-GT-AAGAAGAAAGTTGTACATGTGTTT---AAT-TATTCTTTCAAATATCTTACCAC-A-ACAGCTAAGTAAAGAAATTGGTATATAGTT---------C--GA-----AGCT--ATAG-A-----C-T--T-GT-C--A---CCTTTTT-Tga
gi|51912 : A-AATAAAATTAGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTTATTAACCAAA--GA-----------A--G-G------------GT-CT-----CCTTTTT-TATAAACAGCGCA--T-A-C--AAATGCTTCT-TTCCA---GACTTTTGGG--AA--AACACTTTT-GGTC--AGAC-AAAC-GTTAAATAA
gi|51913 : A-GATAAAATTGGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTT---------ATTAA-----C-CA--A--G-G-----A-A--G-GG-TCTA---CCTTTTTATAAACAGC--GCA--T-A-C--AAATGCTTCT-TTCCA---GACTTTTGGG--AA--AACACTTTT-AGTC--AGAC-AAAC-GTTAAATAA
gi|51914 : A-AATAAAATTAGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTTATTAACCAAA--GA-----------A--G-G------------GT-CT-----CCTTTTT-TATAAA-CA-GCACAT-A-C--AAATGCTTCT-TTTCA---GACTTTTGGG--AA--AACACTTTT-GGTC--AGAC-AAAC-GTTAAATAA
gi|51915 : ATAATGTTAT--G-TCTAGTGAAAAAGTTAAATATATGTTTATGAAT-AATTTTTTCCATAACCTTTTCAA-T-GCAACAAAGAAGAGAAATAGGACGATAATT---------G--AATACATCGAA--A--G-G-----G-T--C-GT-TTT--------TTT-TAAAAA-TT-GCAC-TAA-C--ATTTGCAGTT-TTCCA---TTATTTTGGAACAG--TACGTGTTT-GAAT--G----GATCTGTTGAA
gi|51916 : TT-G-TC-AAGAAGAAA-TTATACATATTTTTAAAAAC-TAATCTTTCAATAATCTTTCCAC-A-ACAACTTAGAAGTGAAACGGGTCTATAAAT---------A--AA-----AGTT--A--A------------C-GT-TTTATCTCCCTTTT-TGAAAATTG-GAGT-A-A-C--TTGAGCTTTC-TTCCA---TGAGTTTGGG--AA--
gi|51917 : AATTGTAAATATGTTTAAAAAC-AACGGGCTCCATAACCTTCCCTA-T-ACAACTGATAAGGGACATTTGTCTACGATT---------A--GA-----GG----G--G-GAGACTT-T--T-GC-TC-----CTTTTTT-TAAACAGAG-GCAT-T-A-C--ATTTGCTAAT-TTCCA---AGCATTTTGA--TA--T--ATATTT-TCTTGAA-GT-GATCGATTGAACAA
Alignments
lowQualScore : 44444444444444444444444444444444444444444444444444444 1111
lowQualScore : 8 0 33 333 3 1 0 1 22 1 1 1 22 1 1 999 1 1 1 22222222222222222222222222222222222222222222222222222 1 55 2 2 2 2 666666 2 2 555 3 22 55555 2 77 33 3333 3
lowQualScore : . . .. ... . . . . .. . . . .. . . ... . . . ..................................................... . .. . . . . ...... . . ... . .. ..... . .. .. .... .
lowQualScore : 4 2 33 999 8 0 1 0 33 5 8 0 55 0 0 111 0 0 6 44444444444444444444444444444444444444444444444444444 9 77 1 0 0 0 444444 9 0 555 0 88 88888 4 22 22 2222 9
consensus : CTTATA-AATAAGNTTATT-A-TC-AANAAGAAAATTATANATATGTTTGNAAAC-AANTCTTTCCATNANCTTNCCAA-C-ACAGCTTAANAGNGANATTGGTCTATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TAAAAAGNG-GCAT-T-A-C--ANNNGCTGAT-TTCCA---TAANTCTGGA--AA--TTCACATTC-GATT--A-AC-GATCTATTAAATAA
Reference ( family-777 ) : CTTATA-AATAAGNTTATT-A-TC-AANAAGAAAATTATANATATGTTTGNAAAC-AANTCTTTCCATNANCTTNCCAA-C-ACAGCTTAANAGNGANATTGGTCTATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TAAAAAGNG-GCAT-T-A-C--ANNNGCTGAT-TTCCA---TAANTCTGGA--AA--TTCACATTC-GATT--A-AC-GATCTATTAAATAA
gi|51896 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-T-A-C--TAGGGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51897 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-T-A-C--TAGGGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51898 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-T-A-C--TAGGGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51899 : CTTGTA-AATAAGGTTATC-A-TC-AATAAGAAAAGTATATATATGTTTGTACACAAAGTCTTTCCATTAACTTGGGAA-T-ACAGCTTAAAA-TG--ATTG----ATACTT---------A--GA-----CGCC--A--G-G-----T-T--T---------------------------G-GCAT-T-A-C--TAGAGCTGAT-TTCCA---CAAATCTGGA--AA--TTCACATTT-AATT--A-AT-GATCTTTTAAATAA
gi|51900 : CTTGTA-TACCAAGTTATT-A-GC-AACAAAAAAATTATAAATATGCTTGTTAAC-AACTCTTTCCATTAATTTACCAA-C-ACAACTCAATAGTGTTATTTATCTATAATT---------A--GA-----CA----A--G-G-----TAT--TAGTATTTC---CTTTTTT-TAAATAGTG-ACAT-T-ATC--AAA--CTG---TTACAG--TAATTCTGGA--AA--TTTACATTC-GTAT--A-GT-GATTTATTA
gi|51901 : CTCGTA-TATCAAGTTATT-A-GC-AACAA-AAATTTTTAGATATGTTTGTATAC-AACAATTTACATCAATTTACCAA-C-ACAACTCAAAAGTGTTATTGGCCTATAATT---------A--GA-----CGAT--G--T-A-----T-TACT-AT-TT-----CC--TTT-TAATAAGTG-GCAT-T-A-TCAAACAGC--GT-TTCCA---TAATTCTGGA--AT--GTTACAT
gi|51902 : CTTAAA-AATGAGATCATT-A-CT-ATTTAGATGATTATAAATGTGCTTGTATAC-AACTCTTTCAAAAACTTTTCCAA-C-ACAACTCAATAAAGAAATCGGTCTATAATT---------A--GT-----TGTA--A--C-A-----T-T--T-GC-ACAT---CCCTTTT-TAAACAATG-GCAT-G-A-C--ATTTGCAAAT-TTCCA---GCATTCTGGA--AA--GCAACACTC-ACTT--A-GG-GATCTATTAAAaataatctcactgaaca
gi|51903 : TTGTA-AATTAGTTTATT-T-TC-AATCAGAAAATTATAAATATGTTTGTAGAC-AACTCTTTCCATAAGTTTACCAA-C-ACAGCTTAATAAAGATATTGGCCGATAATT---------A--GA-----TGGC--A--C-G-----T-T--T-GT-TTGA---CCCTTCT-TAAAAAGAG-GCAT-T-A-C--AGTAGCTGAC-TTCCA---TGACTCTGGA--AA--TTTACATTC-AAGT--A-AG-GATTTATTAAATAA
gi|51904 : TTGTA-AATTAGTTTATT-T-TC-AATCAGAAAATTATAAATATGTTTGTAGAC-AACTCTTTCCATAAGTTTACCAA-C-ACAGCTTAATAAAGATATTGGCCGATAATT---------A--GA-----TGGC--A--C-G-----T-T--T-GT-TTGA---CCCTTCT-TAAAAAGAG-GCAT-T-A-C--AGTAGCTGAC-TTCCA---TGACTCTGGA--AA--TTTACATTC-AAGT--A-AG-GATTTATTAAATAA
gi|51905 : TTATA-AATAAGTTTGTT-T-GC-ATGAAGAAAATTATAAATGTTTTTATAGAC-ACAGCGTTCCATTAATTAACCCA-A-GCAGCTTAAAAGGGATATTGGTCTGTAATTGCA------A--GA-----AACTGAA--G-A-----A-T--C-G---------CCCTTTT-TGAAGAGAG-GCAT-T-A-C--CAATGCAGAC-TTCCAGACTAA---TGGA--AACGTTTGAGTTT-G--T--A-AT-GATTTATTAAACAA
gi|51906 : TTATATAATAA-ATTATT-G-CT-AATTAAAAAATTATACAAATATTTGAACAC-TAATCTTTCCAATAATTTTCCGG-TGAC-GCTTAATAATGACACTGGTCTATAATT---------ACTAA-----CCAT--G--G-A-----T-T--T-AT-CT-----CCTTTTT-TAAATATAG-GAAT-T-A-C--ATTTGCTGCT-TTCCA---CCTATCTGGA--AA--AATACTTTCTGA-T--A-GA-GAACGATTAAATAA
gi|51907 : TTATACAATAA-ATTGTT-ACTC-AAGAAGAAG-TTATACATATGTTTAAAAAT-TATTCTTTCTAAAATCTTCCCGA-C-ACAGCTTAGCAACGACACTGGTCTATAATT---------A--GA-----CG-------G-A-----A-T--T-GA-CTTATCCCCTTTCT-TAAAAATAG-GAGT-T-A-C--ATGGGCTATT-TTCCA---TGAGTTAGGG--AA--ATGGCTTTC-GG-T--A-ATAGAACGATTATATAA
gi|51908 : TTATA-AATCAAATTATT-A-TC-AAGAAAAAAGTTATACATATTCTTAAAAAC-AAGCCTTTCAAAAAGTTTTCCGA-C-ACAACTAATTAAAGACACAGGTCTGTAATT---------T--GA-----CACC--AATG-A-----C-T--T-GT-CT-----CCCTTTT-TAAAAATAG-GAGT-T-A-C--ATTTGC-AATCTTCCA---CAAATTGGGA--AA--
gi|51909 : TTGTA-AATAAGTTTATT-T-TCCAATCAGACAACTATAAATAAGTTTTAAGAC-AACTCTTTCCATAAGTTTACCAA-C-TCATCGTAATAAAGATATTGGCCGATAATT---------
gi|51909 : AT-T-A-C--AGAAGCTGAC-TTCTG---TGATTCTGGA--AA--TTTACATTC-AAGT--A-AA-AATGTATTAAATAAttattacagaagctgacttctgtgattctggaaatttacattcaagtaaaaatgtattaaataa
gi|51910 : ttgtaaataagtttattttccaatcagacaactataaataagttttaagacaactctttccataagtttaccaactcatcgtaataaagatattggccgataattttTTATACAATA-GTTGATTTG-TC-AAGAA-AAAGTTATACATATTTTTAAAAAC-TTTTCTTTCAAGAATCTTTCCAT-A-ACAGCTTAAAAGTGAAACGGGTCTATAATA---------A--GA-----AGTT--A--ACG-----T-T--T-TA-TCTC---CCTTTTT-
gi|51911 : TTATACAATA-TTTTATT-T-GT-AAGAAGAAAGTTGTACATGTGTTT---AAT-TATTCTTTCAAATATCTTACCAC-A-ACAGCTAAGTAAAGAAATTGGTATATAGTT---------C--GA-----AGCT--ATAG-A-----C-T--T-GT-C--A---CCTTTTT-Tga
gi|51912 : A-AATAAAATTAGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTTATTAACCAAA--GA-----------A--G-G------------GT-CT-----CCTTTTT-TATAAACAGCGCA--T-A-C--AAATGCTTCT-TTCCA---GACTTTTGGG--AA--AACACTTTT-GGTC--AGAC-AAAC-GTTAAATAA
gi|51913 : A-GATAAAATTGGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTT---------ATTAA-----C-CA--A--G-G-----A-A--G-GG-TCTA---CCTTTTTATAAACAGC--GCA--T-A-C--AAATGCTTCT-TTCCA---GACTTTTGGG--AA--AACACTTTT-AGTC--AGAC-AAAC-GTTAAATAA
gi|51914 : A-AATAAAATTAGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTTATTAACCAAA--GA-----------A--G-G------------GT-CT-----CCTTTTT-TATAAA-CA-GCACAT-A-C--AAATGCTTCT-TTTCA---GACTTTTGGG--AA--AACACTTTT-GGTC--AGAC-AAAC-GTTAAATAA
gi|51915 : ATAATGTTAT--G-TCTAGTGAAAAAGTTAAATATATGTTTATGAAT-AATTTTTTCCATAACCTTTTCAA-T-GCAACAAAGAAGAGAAATAGGACGATAATT---------G--AATACATCGAA--A--G-G-----G-T--C-GT-TTT--------TTT-TAAAAA-TT-GCAC-TAA-C--ATTTGCAGTT-TTCCA---TTATTTTGGAACAG--TACGTGTTT-GAAT--G----GATCTGTTGAA
gi|51916 : TT-G-TC-AAGAAGAAA-TTATACATATTTTTAAAAAC-TAATCTTTCAATAATCTTTCCAC-A-ACAACTTAGAAGTGAAACGGGTCTATAAAT---------A--AA-----AGTT--A--A------------C-GT-TTTATCTCCCTTTT-TGAAAATTG-GAGT-A-A-C--TTGAGCTTTC-TTCCA---TGAGTTTGGG--AA--
gi|51917 : AATTGTAAATATGTTTAAAAAC-AACGGGCTCCATAACCTTCCCTA-T-ACAACTGATAAGGGACATTTGTCTACGATT---------A--GA-----GG----G--G-GAGACTT-T--T-GC-TC-----CTTTTTT-TAAACAGAG-GCAT-T-A-C--ATTTGCTAAT-TTCCA---AGCATTTTGA--TA--T--ATATTT-TCTTGAA-GT-GATCGATTGAACAA
blockSeqs : T GG AC C C T GT C A T TT A G TG G T A GAATACATCGAAAGGGTCGTTTT A GT C A A T CAAACA A C GAC A AC CGTTT T AT GA ATA T
blockSeqs : C GG TG T C T GT C . T TT A G TT G T A AGACAAGGTATTAGTATTTC . GT . . . . TAGG A . G A . TTC . AT . GAC T
blockSeqs : C GG A . T T GT C . G TT A G TT A T T AGAAGTTAACGTTTTATCTC . GT . . . . TAGG A . . A . TTC . AT . GAC T
blockSeqs : C AG A . C A GT A . C TT A A TT T T T ATTAACCAAGGAAGGGTCTA . GT . . . . TAGA G . . T . TTC . TA . GAC T
blockSeqs : . AG A . C G GT T . C TC A A T A T A AGAGGGGGAGACTTTTGCTC . AT . . . . ATTT A . . T . TTT . CT . AT T
blockSeqs : . GA A . T A GT T . C AA C T T T A T AGACGCTAGGTTTGTTTTA . GA . . . . AGTA A . . T . GTT . AG . AT T
blockSeqs : . GT A . T A GT G . C TA G A T T A T AGACGCTAGGTTTGTTTTA . GA . . . . AGTA A . . C . GCA . AG . AT T
blockSeqs : . GT A . T A GT G . C TA G A C T A T AGACGATGTATTACTATTT . GA . . . . CAAT A . . C . TTT . AG . GT T
blockSeqs : . GT T . G A AT G . A TT A A C A G C AGTTGTAACATTTGCACAT . TA . . . . ATTT C . . A . TTT . GT . GG G
blockSeqs : . AA T . T C GA C . A AT A T C T T C AGATGGCACGTTTGTTTGA . TA . . . . ATGG T . . G . AAT . GT . AG G
blockSeqs : . GT T . G C AA A . T AA T C C C C C AGATGGCACGTTTGTTTGA . TA . . . . ATTT A . . A . ATG . GT . AG T
blockSeqs : . GT G . G C AA A . G AA G T C T A T GCAAGAAACTGAAGAATCG . CA . . . . AGAA A . . T . TTT . AA . AT T
blockSeqs : . TT A . T A TA G . C TA G A A T A A ACTAACCATGGATTTATCT . GC . . . . AAAT C . . T . AAC . CT . GA G
blockSeqs : . AA T . G C AA A . T GA T T C A T A AGACGGAATTGACTTATCC . TT . . . . AAAT C . . T . AAC . A . AA .
blockSeqs : . AA T . G C AA A . T AT T A C T A T TGACACCAATGACTTGTCT . GA . . . . AAAT C . . T . AAC . G . GT .
blockSeqs : . AA A . G C AA A . G AC C G C C T T CGAAGCTATAGACTTGTCA . C . . . . ATTT T . . T . TAC . . . . .
blockSeqs : . TG A . G C AA A . G AC C G A C T T ATTAACCAAAGAAGGGTCT . T . . . . TTGA T . . G . T
blockSeqs : . A A . G C AT A . G AC C G A C T A ATTAACCAAAGAAGGGTCT . . . . . . ATTT A . . A .
blockSeqs : A G . T T AA A . T TA C T T A A A AAAAGTTAACGTTTTATCT . . . . AAA . . . . .
blockSeqs : G . G C AA A . A TA T T A A T C AGACGCCAGGTTT .
blockSeqs : A . A . C TA C C T A G .
blockSeqCons :
originalCons : CTTATA-AATAAGNTTATT-A-TC-AANAAGAAAATTATANATATGTTTGNAAAC-AANTCTTTCCATNANCTTNCCAA-C-ACAGCTTAANAGNGANATTGGTCTATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TAAAAAGNG-GCAT-T-A-C--ANNNGCTGAT-TTCCA---TAANTCTGGA--AA--TTCACATTC-GATT--A-AC-GATCTATTAAATAA
finalCons : CTTATA-AATAAGNTTATT-A-TC-AANAAGAAAATTATANATATGTTTGNAAAC-AANTCTTTCCATNANCTTNCCAA-C-ACAGCTTAANAGNGANATTGGTCTATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TAAAAAGNG-GCAT-T-A-C--ANNNGCTGAT-TTCCA---TAANTCTGGA--AA--TTCACATTC-GATT--A-AC-GATCTATTAAATAA
Alignments
lowQualScore : 44444444444444444444444444444444444444444444444444444 1111
lowQualScore : 8 0 33 333 3 1 0 1 22 1 1 1 22 1 1 999 1 1 1 22222222222222222222222222222222222222222222222222222 1 55 2 2 2 2 666666 2 2 555 3 22 55555 2 77 33 3333 3
lowQualScore : . . .. ... . . . . .. . . . .. . . ... . . . ..................................................... . .. . . . . ...... . . ... . .. ..... . .. .. .... .
lowQualScore : 4 2 33 999 8 0 1 0 33 5 8 0 55 0 0 111 0 0 6 44444444444444444444444444444444444444444444444444444 9 77 1 0 0 0 444444 9 0 555 0 88 88888 4 22 22 2222 9
consensus : CTTATA-AATAAGNTTATT-A-TC-AANAAGAAAATTATANATATGTTTGNAAAC-AANTCTTTCCATNANCTTNCCAA-C-ACAGCTTAANAGNGANATTGGTCTATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TAAAAAGNG-GCAT-T-A-C--ANNNGCTGAT-TTCCA---TAANTCTGGA--AA--TTCACATTC-GATT--A-AC-GATCTATTAAATAA
Reference ( family-777 ) : CTTATA-AATAAGNTTATT-A-TC-AANAAGAAAATTATANATATGTTTGNAAAC-AANTCTTTCCATNANCTTNCCAA-C-ACAGCTTAANAGNGANATTGGTCTATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TAAAAAGNG-GCAT-T-A-C--ANNNGCTGAT-TTCCA---TAANTCTGGA--AA--TTCACATTC-GATT--A-AC-GATCTATTAAATAA
gi|51896 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-T-A-C--TAGGGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51897 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-T-A-C--TAGGGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51898 : CTTATA-AATGAGGTTATT-A-TC-AACAAGAAAATTATATATATGTTTGTACAC-AATTCTTTCCATTAACTTGCCAA-T-ACAGCTTAAGAGTGAAATTGGTCGATAATT---------A--GA-----CGCT--A--G-G-----T-T--T-GT-TTTA---CCTTTTT-TGAAAAGTG-GCAT-T-A-C--TAGGGCTGAT-TTCCA---TAAATCTGGA--AA--TTCACATTT-GATT--A-AT-GATCTATTAAATAA
gi|51899 : CTTGTA-AATAAGGTTATC-A-TC-AATAAGAAAAGTATATATATGTTTGTACACAAAGTCTTTCCATTAACTTGGGAA-T-ACAGCTTAAAA-TG--ATTG----ATACTT---------A--GA-----CGCC--A--G-G-----T-T--T---------------------------G-GCAT-T-A-C--TAGAGCTGAT-TTCCA---CAAATCTGGA--AA--TTCACATTT-AATT--A-AT-GATCTTTTAAATAA
gi|51900 : CTTGTA-TACCAAGTTATT-A-GC-AACAAAAAAATTATAAATATGCTTGTTAAC-AACTCTTTCCATTAATTTACCAA-C-ACAACTCAATAGTGTTATTTATCTATAATT---------A--GA-----CA----A--G-G-----TAT--TAGTATTTC---CTTTTTT-TAAATAGTG-ACAT-T-ATC--AAA--CTG---TTACAG--TAATTCTGGA--AA--TTTACATTC-GTAT--A-GT-GATTTATTA
gi|51901 : CTCGTA-TATCAAGTTATT-A-GC-AACAA-AAATTTTTAGATATGTTTGTATAC-AACAATTTACATCAATTTACCAA-C-ACAACTCAAAAGTGTTATTGGCCTATAATT---------A--GA-----CGAT--G--T-A-----T-TACT-AT-TT-----CC--TTT-TAATAAGTG-GCAT-T-A-TCAAACAGC--GT-TTCCA---TAATTCTGGA--AT--GTTACAT
gi|51902 : CTTAAA-AATGAGATCATT-A-CT-ATTTAGATGATTATAAATGTGCTTGTATAC-AACTCTTTCAAAAACTTTTCCAA-C-ACAACTCAATAAAGAAATCGGTCTATAATT---------A--GT-----TGTA--A--C-A-----T-T--T-GC-ACAT---CCCTTTT-TAAACAATG-GCAT-G-A-C--ATTTGCAAAT-TTCCA---GCATTCTGGA--AA--GCAACACTC-ACTT--A-GG-GATCTATTAAAaataatctcactgaaca
gi|51903 : TTGTA-AATTAGTTTATT-T-TC-AATCAGAAAATTATAAATATGTTTGTAGAC-AACTCTTTCCATAAGTTTACCAA-C-ACAGCTTAATAAAGATATTGGCCGATAATT---------A--GA-----TGGC--A--C-G-----T-T--T-GT-TTGA---CCCTTCT-TAAAAAGAG-GCAT-T-A-C--AGTAGCTGAC-TTCCA---TGACTCTGGA--AA--TTTACATTC-AAGT--A-AG-GATTTATTAAATAA
gi|51904 : TTGTA-AATTAGTTTATT-T-TC-AATCAGAAAATTATAAATATGTTTGTAGAC-AACTCTTTCCATAAGTTTACCAA-C-ACAGCTTAATAAAGATATTGGCCGATAATT---------A--GA-----TGGC--A--C-G-----T-T--T-GT-TTGA---CCCTTCT-TAAAAAGAG-GCAT-T-A-C--AGTAGCTGAC-TTCCA---TGACTCTGGA--AA--TTTACATTC-AAGT--A-AG-GATTTATTAAATAA
gi|51905 : TTATA-AATAAGTTTGTT-T-GC-ATGAAGAAAATTATAAATGTTTTTATAGAC-ACAGCGTTCCATTAATTAACCCA-A-GCAGCTTAAAAGGGATATTGGTCTGTAATTGCA------A--GA-----AACTGAA--G-A-----A-T--C-G---------CCCTTTT-TGAAGAGAG-GCAT-T-A-C--CAATGCAGAC-TTCCAGACTAA---TGGA--AACGTTTGAGTTT-G--T--A-AT-GATTTATTAAACAA
gi|51906 : TTATATAATAA-ATTATT-G-CT-AATTAAAAAATTATACAAATATTTGAACAC-TAATCTTTCCAATAATTTTCCGG-TGAC-GCTTAATAATGACACTGGTCTATAATT---------ACTAA-----CCAT--G--G-A-----T-T--T-AT-CT-----CCTTTTT-TAAATATAG-GAAT-T-A-C--ATTTGCTGCT-TTCCA---CCTATCTGGA--AA--AATACTTTCTGA-T--A-GA-GAACGATTAAATAA
gi|51907 : TTATACAATAA-ATTGTT-ACTC-AAGAAGAAG-TTATACATATGTTTAAAAAT-TATTCTTTCTAAAATCTTCCCGA-C-ACAGCTTAGCAACGACACTGGTCTATAATT---------A--GA-----CG-------G-A-----A-T--T-GA-CTTATCCCCTTTCT-TAAAAATAG-GAGT-T-A-C--ATGGGCTATT-TTCCA---TGAGTTAGGG--AA--ATGGCTTTC-GG-T--A-ATAGAACGATTATATAA
gi|51908 : TTATA-AATCAAATTATT-A-TC-AAGAAAAAAGTTATACATATTCTTAAAAAC-AAGCCTTTCAAAAAGTTTTCCGA-C-ACAACTAATTAAAGACACAGGTCTGTAATT---------T--GA-----CACC--AATG-A-----C-T--T-GT-CT-----CCCTTTT-TAAAAATAG-GAGT-T-A-C--ATTTGC-AATCTTCCA---CAAATTGGGA--AA--
gi|51909 : TTGTA-AATAAGTTTATT-T-TCCAATCAGACAACTATAAATAAGTTTTAAGAC-AACTCTTTCCATAAGTTTACCAA-C-TCATCGTAATAAAGATATTGGCCGATAATT---------
gi|51909 : AT-T-A-C--AGAAGCTGAC-TTCTG---TGATTCTGGA--AA--TTTACATTC-AAGT--A-AA-AATGTATTAAATAAttattacagaagctgacttctgtgattctggaaatttacattcaagtaaaaatgtattaaataa
gi|51910 : ttgtaaataagtttattttccaatcagacaactataaataagttttaagacaactctttccataagtttaccaactcatcgtaataaagatattggccgataattttTTATACAATA-GTTGATTTG-TC-AAGAA-AAAGTTATACATATTTTTAAAAAC-TTTTCTTTCAAGAATCTTTCCAT-A-ACAGCTTAAAAGTGAAACGGGTCTATAATA---------A--GA-----AGTT--A--ACG-----T-T--T-TA-TCTC---CCTTTTT-
gi|51911 : TTATACAATA-TTTTATT-T-GT-AAGAAGAAAGTTGTACATGTGTTT---AAT-TATTCTTTCAAATATCTTACCAC-A-ACAGCTAAGTAAAGAAATTGGTATATAGTT---------C--GA-----AGCT--ATAG-A-----C-T--T-GT-C--A---CCTTTTT-Tga
gi|51912 : A-AATAAAATTAGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTTATTAACCAAA--GA-----------A--G-G------------GT-CT-----CCTTTTT-TATAAACAGCGCA--T-A-C--AAATGCTTCT-TTCCA---GACTTTTGGG--AA--AACACTTTT-GGTC--AGAC-AAAC-GTTAAATAA
gi|51913 : A-GATAAAATTGGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTT---------ATTAA-----C-CA--A--G-G-----A-A--G-GG-TCTA---CCTTTTTATAAACAGC--GCA--T-A-C--AAATGCTTCT-TTCCA---GACTTTTGGG--AA--AACACTTTT-AGTC--AGAC-AAAC-GTTAAATAA
gi|51914 : A-AATAAAATTAGT-A-TC-ACGAAAGAAATTATACATGTGTTTAAAAAT-AAGTCTTTCAAACACTTTGCCAATT-AC-GCTTAACAGTGATATAGGTCTATAGTTATTAACCAAA--GA-----------A--G-G------------GT-CT-----CCTTTTT-TATAAA-CA-GCACAT-A-C--AAATGCTTCT-TTTCA---GACTTTTGGG--AA--AACACTTTT-GGTC--AGAC-AAAC-GTTAAATAA
gi|51915 : ATAATGTTAT--G-TCTAGTGAAAAAGTTAAATATATGTTTATGAAT-AATTTTTTCCATAACCTTTTCAA-T-GCAACAAAGAAGAGAAATAGGACGATAATT---------G--AATACATCGAA--A--G-G-----G-T--C-GT-TTT--------TTT-TAAAAA-TT-GCAC-TAA-C--ATTTGCAGTT-TTCCA---TTATTTTGGAACAG--TACGTGTTT-GAAT--G----GATCTGTTGAA
gi|51916 : TT-G-TC-AAGAAGAAA-TTATACATATTTTTAAAAAC-TAATCTTTCAATAATCTTTCCAC-A-ACAACTTAGAAGTGAAACGGGTCTATAAAT---------A--AA-----AGTT--A--A------------C-GT-TTTATCTCCCTTTT-TGAAAATTG-GAGT-A-A-C--TTGAGCTTTC-TTCCA---TGAGTTTGGG--AA--
gi|51917 : AATTGTAAATATGTTTAAAAAC-AACGGGCTCCATAACCTTCCCTA-T-ACAACTGATAAGGGACATTTGTCTACGATT---------A--GA-----GG----G--G-GAGACTT-T--T-GC-TC-----CTTTTTT-TAAACAGAG-GCAT-T-A-C--ATTTGCTAAT-TTCCA---AGCATTTTGA--TA--T--ATATTT-TCTTGAA-GT-GATCGATTGAACAA