lowQualScore : 1 222 1 1 1 1 11111 1 222222222 3333333333333333333 1111111111111 2222222222222222222222 1 3333333333333333333
lowQualScore : 1 2 22 2 2 5 99 333 2 3 7 4 7 2 2 0 3 0 88888 33 2 1 5 33 2 8 5 888 66 33 0 3 5555 444 2 33 3 2 00000 2 44 5 33 777 0 33 7 999 33 0 44 0 44 0 66 3 222222222 0000000000000000000 7 7777777777777 555 44 3 6666 555 7777777777777777777777 0 2 555 77777 2 2 44 1 3333333333333333333 1
lowQualScore : . . .. . . . .. ... . . . . . . . . . . ..... .. . . . .. . . . ... .. .. . . .... ... . .. . . ..... . .. . .. ... . .. . ... .. . .. . .. . .. . ......... ................... . ............. ... .. . .... ... ...................... . . ... ..... . . .. . ................... .
lowQualScore : 4 1 99 4 4 4 77 888 7 9 9 6 4 4 4 5 5 6 22222 22 5 4 0 44 7 0 3 333 33 77 1 9 7777 777 7 77 1 9 99999 9 44 7 99 999 4 99 9 999 99 8 22 8 22 2 44 1 333333333 7777777777777777777 0 5555555555555 444 22 1 5555 444 3333333333333333333333 3 9 000 11111 9 9 88 3 1111111111111111111 2
consensus : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCGA-G--CGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAAAATGGCTACACCCCTATCAACTTGGGGTGATATTTTGAGACCTGGNCAAAAT-TGTTTT-GTTCCATTTTGGATATCAGATAGCAGATCAGATTCTTCCCTTGATTTTC-----A--TA-ACATTATTAAGGGACC--TGTG-T-AA-TAAACAA---ATTG--TAT--AAAGCAAAATAAGGCGAGATGGAGGACTACATTGCAATGTAA----GTT---AT-CATGTTTACATATCTATCTA--TTATTGTTATGAATTT-TAAAT----ATCTTATTATTGTT-TGT-TTTTT-ATTTGAAATAAATACA--AACTTTAAAAA---CATCTA--TTTTTT-C-TT--TAATATAT--GCATAA--ACCGCAGCATGTAACAACA-CA---------TTA--------T--------G-TTATA-----T-------A---A--AG-AAAGAGAAGTGAAACAATTTGT----GTTACCG---TATT----------------------ACGCCTTATAAACATAATTTTATAGACA-TGTGAACATA---GTA-----TTATATAT-AACAATT-TATTGTCAA-TATTTTAGAATATTGAATAATATTTGTATCTTTCATTATAGGGTGGGAATGGACTGTATGAATAAATCCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACCAGAAGATA
Reference ( gi|45860 ) : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA-G--CGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGAAGACTATA--ACTACAAATGAAAATGGCTACACCCCTATCAACTTGGGGTGATATTTTGAGACCTTGACACAAT-TGTTTT-GTTCCATTTTGGATATCAGATAGCAGATCCGATTCTTCCCTTGATTTTC-----A--TA-ACAGTATTAAGGGACC--TGTG-T-AA-TAAACAA---ATTG--TAT--AAAGCAAAATAAGGCGAGATGGAGGATTACATTGCAATGTAA----GTT---AT-CATGTTTACATATCTATCTA--TTATTGTTTTGAATTT-TAAAC----ATCTTATTATTGTT-TGT-TTTTT-ATTTGAAATAAATACA--AACTTTAAAAA---CATCTA--TTGTTT-C-TT--TAATATAT--GCATAA--ACCGCAGTATGTAACAACA-CA---------TTA--------T--------T-TTTTA-----T-------A---A--AG-AAAGAGAAGTGAAACAATTTGT----GTTACCG---TATT----------------------ACGCCTTATAAACATAATTTTATAGACA-TGTGAACATA---GTA-----TTATATAT-AACAATT-TATTGTCAG-TATTTTAGAATATTGAATAATATTTGTATATTTCATTATAGGGTGGGAATGGACTGTATGAATAAATCCAGCTCTGTAAATTAAAAGATAAAACCAGCACTGTAAACCAGAAGATA
gi|45858 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA-G--CGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAAAATGGCTACACCCCTATCAACTTGGGGTGATATTTTGAGACCTGGACAAAAT-TGTTTT-GTTCCATTTTGAATTTCAGATAGTAGACCCGATTCCTCCCTTGATTTTC-----A--TA-ACATTATTAAGGGACC--TGTG-T-AA-TAAACAA---ATTG--TAT--AAAGCAAAATAAGGCGAGATGGAGGACTTCATTGCAATGTAA----GTT---AT-CATGTTTACATATCTATCTA--TTATTGTTATGAATTT-TAAAT----ATCTTATTATTGTT-TGT-TTTTT-ATTTGAAATAATTACA--AACTTTAAAAA---CATTT---TT-TTT-C-TG--TAATATAT--GCATAA--ATCGCAGCATGTACCAACA-CA---------ATA--------T--------G-TTATA-----T-------A---A--AG-AAAGAGAAGTGAAACAATTTGT----GTTACCG---TATT----------------------TCGCCTTATAAACATAATTTTATAGACA-TGTTAACATA---GTA-----TTATATAT-AACAATT-TATTGTCAG-TATTTTAGAATATTGAATAATATTTGTATATTTCATTATAGGATGGGAATGGACTGTATGAATAAATCAAGCACTGTAAATTAGAAGATAAAACCAGCACTGAAAACCAGAAGA
gi|45859 : AGGCCACTCTCAAATTATATGCATGCCAGACATTCCATTATCCAT-G--CGAGGTTTGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAAAATGGCTACACCCCTATCAACTTGGGGTGATATTTTGAGACCTGGACAAAAT-TGTTTT-GTTCCATTTTGGATATCAGATAGCAGATCAGATTCTTTCCTTGATTTTC-----G--TA-ATATTATTAAGGGACC--TGTG-T-AA-TAAACAA---ATTG--TAT--AAAGCAAAATAAGGCGAAATGGAGGACTACATTGCAATGTAA----GTT---AT-CATGCTTACATATCTATCTA--TTATTGTAATAAATTT-TAAAT----ATATTATTATTGTT-TGT-TTTTT-ATTTGAAATAAATACA--AAAATTAAAAA---CATTTA--TT-TTT-C-TT--TAATATAT--GCATAA--ACCGCAGCATGTAACAACA-CA---------TTA--------T--------G-TTATA-----T-------A---A--AG-AAAGAAAAGTGAAACAATTTGT----GTTACCG---TATA----------------------GCGCCTTATAAACATAATTTTATAGACA-TGTGAGCATA---GTA-----TTATATAT-AACAATT-TATTGTCAA-TATTTTAGAATATTGAATAATATTTGTATCTTTCATTAAAGGGTGGGAATGGACTGTATGAATAAATCCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACCAGAAGATA
gi|45861 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA-G--TGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACAAATATA--ACTACATAGGAAAATGGCTACACCCCTATCAACTTGGGGTGATATTTTGAGACCTGGACGAAAT-TGTTTT-GTTCCATTTTGGATATCAGATAGCAGATCAGATTCTTCCCTTGATTTTC-----A--TA-ACATTATTAAGGGACC--TGTA-T-AA-TAAACAA---ATTG--TAC--AAAGCAAAATAAGGCGAGATAGAGGGCTACATTGCAATGTAA----GTT---AT-CAAGTTTATATATCTATCTA--TTATTGTAATGAATTT-TAAAT----ATCTTATTATTGTT-TGT-TTTTT-ATTTGAAATAAATATA--AACTTT-AAAG---CATATA--TTTTTT-T-TT--TAAAATAT--GCATAA--ACCACAGCATGTAACAACA-CA---------TTA--------T--------G-TTATA-----T-------A---A--AG-AAAGAGAAGTGAAAAAATTTGT----GTTACCG---TATT----------------------ACGCCTTGTAAACATAATTTTATAGACA-TGTGTACATA---GTA-----TTATATAT-AACAATT-TATTGTCAA-TATTTTAGAATACTGAATAATATTTGTATCTTTCATTATAGGGTGGGATTGAACTGTATGAATAAATCCAGCACTGTAAACC-GAAGATAAAACCAGCACTGTTAACCAGAAGATA
gi|45862 : AGGCCTCTCTCAAATTATATGCATGCCTGACATTCCACTATCCAA-G--CAAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAAAATGGCTACACCCCTATCAACTTGGG---ATATTTTGAGACCTGGACAAAAT-TGTTTT-GTTCCATTTTGGATATCAGATAGCAGATCAGATTCTTTCCTTGATTTTC-----A--TA-ACATTATTAAGGGACC--TGTG-T-AA-TAAACAA---ATTG--TAT--AAAGCAAAATAAGGCGAGATGGAGGACTACATTG-------------TT---AT-CATGTTTACATACCTATCTA--TTATTGTTATGAATTT-TAAAT----ATCTTATTATTGTT-TGT-TTTTT-ATTTGAAATAAATACA--AACTTTAAAAA---CATCTA--TTTTTT-C-TT--TAATATAT--GCATAA--ACCGCAGCATGTAACAACA-CA---------TTA--------T--------G-TTACA-----T-------A---A--AG-AAAGAGAATTGAAACAATTTGT----GTTACCG---TATA----------------------ACGCCTTATAAACATAATTTTATAGACA-TGTGAAC--A---ATA-----TTATATAT-AACAACT-TGTGGTCAA-TATTTTAGAAAATTGAATAATATTTGTTTCTTTCATTAAAGGGTGGGAATGGACTGTATGAATAAATCAAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACGAGAAGATA
gi|45863 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA-G--CGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAAC-AGACGACTATA--CCTACATAGGAAAATGGCTACACCCCTATCAACTTGGGGTGATATTTTGAGACCTGGACAAAAT-TGTTTT-GTTTCATTTTGGATATCAG--------------TCTTCCCTTGATTTTC-----A--TA-ACATTATTAAGGGACC--TGTG-T-AA-TAAACAA---ATGG--TAT--AAAGCAAAATAAGGCGAGATGGAGGACTACATTGCAATGTAA----GTT---TT-CATGTTTACATATCTATCTA--TTATTGTTATGAATTT-TAAAT----ATCTTATTATTGTT-TGT-TTTTTTATTTGAAATAAATACA--AACTTAAAAAAACCCATCTA--TTTTTT-C-TT--TAATATAT--GCATAA--ACCGCAGCATGTAACAACA-CA---------TTA--------T--------G-TTATA-----T-------A---A--AA-ATACAGAAGTGAAACAATTTGT----GTTACCG---TATT----------------------ACGCCTTATAAACATAATTTTATAGACA-TGTGAACATA---GTA-----TTATATTT-CACAATT-TATTGTCAA-TATTTTAGAATATTGAATAATATTTATTTACTTTATTATAGGGTGGGAATGGACTGTATGAAGAATTCCAGTACTGTAAATCAGAAGATAAAACCAGCACTGCAAACCAGAAGATA
gi|45864 : AGGCCTTTCTCAAATTATATGCATGCCAAACATTCCATTATACAA-G--CGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATATAACTACATAGGAAAAAGGTTACACCCCTATCAACTTGGGGTGATATTTTGAGACCTGGACAAAAT-TGTTTT-GTTCCATTTTGAATATCAGATAGTAGATCAGATTCTTCCCTTGATTT---------------------AAGGGACC--TGTG-T-AA-TAAACAA---ATTA--TAT--AAAGCATAATAAGGCGAGATAGAGGGCTCCATTGCAATGTAA----GTT---AT-CATGTTTACATACCGATCTA--TTATTGTTATGAATTT-TAAAT----ATCTTATAACTGTT-TGT-TTTTT-ATTTGAAATAAATACA--AACTTAAAAAA---CATCTA--TTTTTTTC-TT--TAATATAT--GCATAA--ACTGCGGCATGTAACAACA-CA---------TTA--------T--------G-TTATA-----C-------A---A--AG-AAAGAGAAGTGAAACA-TTTGT----GTTACCG---TATC----------------------ACGCCTTATTAACATCATTTTATAGACA-TGTGAACATA---GTA-----TTATATAT-AACAATT-TATTGTCAA-TATTTTAGAATATTGAATAATATTTGTATCTTTCATTACAGGGTGGGAATTGACTGTATGCATAAACCCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAATCAGAAGATA
gi|45865 : AGGCCTCTCTCAAATTTTATGCATGCCAGACAT
gi|45866 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA-G--CGAGGTTAGGAGCTCATCACACTACCAGCTG-ATAAGC-AGACTACTATA--ACTACATAGGAAAATGGCTACACCCCTATCAGCTTGGGGTGATAGTTTGAGACCTGGACAAAAT-TGTTTT-GTTCCATTTTGGATATCAG--------------TCTTCCCTTGATTTTC-----A--GA-ACATTATTAAGGGACC--TGTG-T-AA-TAAACAA---ATTG-----------------------AGATGGGGAACTACATAGCAATGTAA----GTT---AC-CATGCTTACATATATATCTA--TTATTGTTATGAATTT-TTAAT----ATCTTATTAGTGTT-TGT-TTTTT-ATTCGAAATAAATAAA--AACTTTACAAA---CATCTA--TT-TTT-C-TT--TAATATAT--GCATAA--ATCGCAGCATGTAACAACA-CA---------TTA--------T--------G-TTATA-----T-------A---A--AG-AAAGAGAAGTGAAACAATTTGT----GTTACAG---TATT----------------------ACGCCTTATAATCATAATTTTATAGACA-TGTGAACATA---GTA-----TTATATAT-AACAATT-TGTTGTCAA-TATTTTAGAATATTGAATAATATTTGTATCTTTCATTA---GGCGGGAATGGACTGTATGAATAAATTCAGCACTGTAAACCAGAAGATAAAACTAGCACTGTAAACCAGAAGATAatggtatgataccccacctagtcacagtatactcccatcgggccgaccaggcatccaagcgaggttaggagctcatcacactaccagctgattagcagatgactatataactgcataggaaaatggctacacccctatcaacttggggtgatattttgagacctggacaaaattgttttgtttcattttggatatcagacagtagatcagattcttcccttgattttcacaacattattaagggacctgtgtaataaataaattgtataaaggaaaataaggtgagatagaggactacattgcaatgtaagttatcatgtttacatatctatctattattgtaatgaattttaaatatcttattattgttgttttttttatttgaaataaatacaaactttaaaaacatctatttttctttaatatatatgcataaaccgcagcatgtaacaacacattatgttatataaagaaaaaagtgaaacaatttgtgttaccgtattacgccttacaaacataattttatagacatgtgaacaaagtattatatataacaatttattgtcaatattttagaatattgaatactatttgtatctttcattttagggtgggaatggactgtatgaataaatccagcactgtaaaccagaagataaaacctgcactgtaaaccagaaga
gi|45867 : AGGTCTCTCTTAAATTATATGCATGCCACCCATTCCATTAACAGA-A--CAAGGCTAAGGGCTCATCACGCTACCAGCTA-ATTAGC-AGACGACTATA--ACTACATAGGAAAATGGTAACACCCATATCAATTTGGGAATATATTTTGAAATCTGGTCAAGAT-CGTTTT-GTTCTATTATGAATATCAGATAGCAGATCAGATTCTTCCCATGATTTCT-----G--TA-AAATTATTAAGGGATC--TATG-T-AAGTAAACAATT-ATTGA-TAT--
gi|45868 : AAGCTTCTATCAAATTATATGCATGCCAGACATTTCATTAT--AA-GAACGAAGCCAGGAGCTCATAACACTACCAACTG-ATGAGC-AGACTAATATA--ACTACATAGGTAAATGGCTACACATATATCAACAT-AGATAATAATTTGAGTATTTATCG-AGTGTGTTAT-GTTCCATTTAGAACATCAGATAGCAGATCAGATTATTTCCTTGATTTTC-----ATCTA-AT--TCTTAAGGAACC--TGT
gi|45869 : AGGCCTCTCGCAAATTATATGCATTCGAGACATACTATTATAGAATG--CGAA--TACGAGCTCATAGCACTACCAGCTG-ATCAGC-AGACTTCTATA--AC-ACA--CGAAAATGGCTACACTTTTATCGACATGGGATGATATTTT-AAATCTTGTCAAAAA-TGTTGT-GTTCCCTTTTAAAGATC
gi|45870 : AGACCTCTCTCAAATTGTATGCATACCAGAGATACCAATCTCAGA-A--CGAGGATAAG
gi|45871 : AGACCTCTCTCAAATTGTATGCATGCCTTAGATTCCATAATCAGA-A--CGAGACCGGG---TGAGCAAACAAAC-------TTAGC-AG--GATCATG--GCTACTGGTAGAAGTAGT-------------GCTTGAG----TGTTTTG-----TT----TAAT-TA-TGT-GT---ATCT--GATGGCAGATA-CA-ATCAG--TTTTCACAC-ATTTCCAAAGGA--TG-AAAGT-TTAAGAAAACAATATA-T-TG-TAA---A---AT-G--TAA--AAATCAGAA------GAGATGAGGGACCCCTTTTCAAGGTAA-----TT---AT-TAC-TTTGTAT-TCCTTCAAGTTTATTCTATTATATCTATATACTAGTAT-TTACTATTATT-TAT-TGTTT-Acagacacagatgtaaacaacaccttaggagtaatggctacttccactgaagctagctcatcttcaagtaaaaaaggatctaactttcattgttgtgtgccatattgcaattcagattctagatatgatgcaacattacattttcatcacattcctagtgaatcagaattgaaaaagaaatggatttgtaaaataagacgggatgaaggccccctattcagggtaagtagtttctattaattatagatgagttgatatttaaagtatatta
gi|45872 : GGACCCTCTAAAATTATATGCATGCCAGACGTTCCAGTATGTAA-A--TGAGGTGAGGAGCTCATAACACTACTAGCGGCACTAGCTACACTACTACA--ACCACAAAGGATAATGGCTACACCTATATTGACATAGGATCCTATTTTGCGATCTTGTCA-AAT-GG---T-GTTCCCTTT-----------CAACAGATCATATTTTCCCCTTG--TTCC-----A--
gi|45873 : GTCTCTCTCAAATTGTATGCATGCCAGACATTTCATTATCAGA-G--CGAGGCTAGGAGCTCATCTCACTACCAGCTG-ATTTGC-AGACGACTATATAACTACATAGGAAAATGGCTAC--CCATATCAGCTTGGGATGGTACTTTGAGATCTGGTCAAGAT-TGTTTTTGTTCCATTATGAAT--CAGATAGCAGATCAGATTCTTCCCTTGATTTCC-----A--TA-AAATTATTAAGGGACC--TGTG-TTAG-TAAACAT---ATTG--TAT--AAAGCAAAATAAGGAGAGACGGAGGACCACATGGCAATGTTA----ATT---AT-CATGTT-ACATATCTATCTA--TTATTGTTGTGAAATT-TAAAT----ATCTAATTGTTTGT-TGT-TTTTTTATTTAAAATAAAATCA--AACTTTAAAAA---CATTTA--TATTTT-A-TT--CGATCAAT--GCAAAA--ACCATAACATGTAACAACA-CA---------TTA--------TGTTA----TATTTTA-----TTCCT---AGCTA--GG-AAAGAGAA---------TTTGT----GTTACCG---TATT----------------------ACGCCTTATAAACATAATTTTATTGCCA-TGTGAACATA---GTA-----TTATATTC-AACAATT-TATTGGCAA-TATTTTAGAATATTGAATAATATTTTTATCTTTCATTATAGG-TGGAAATGAACTGTATGAATA----------CG--------AAGA---AACAAGCACTGTTAACCAGAAGA
gi|45874 : GCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCAGA-G--CGAGGCTTGGAGCTCATCACACTACCAGCTG-ATTAGC-AGATGACT---------------AAAATGGCTACACCCATATCAACTTAGGATGATATTTTGAGATCTGGTCAAGAT-TGTTTT-GTTCCATTATGAATATCAGATAGCAGATCAAATTCTT--CTTGATTTCC-----A--TC-AAATTATTAAGGGACC--TGTG-TCAG-TAAACAC---ATTA--TAT--AAAGCAAAATAAGGAGAGATGGAGGACCACATGGCAATG---------------------TTACATATCTATCTA--TTATTGTTACGAATTT-TAAAT----AGCTTATTAT--TT-TG---TTTT-ATTCAAAAT-AATACA--AACTTTAAAAAT--CATTCA--TTTTTT-TATG--TGATCAAT--GCAAAA--AACG-----TGTAACAACA-AA---------TTA--------TGTTATATAT-TTTTA-----TTTCTAACA---A--GG-AAAGAGAAATGAAACCATTTGT----GTTACCC---TATT----------------------ACGCCTTATAAACATATTTTTATTGACATTGT-AACATA---GTA-----TTATATAT-AACAATTCTACTGTCAC-TATTTTAGAACATTGAATAATATGTG------TCATTATAGGGAGGAAATAGAATGTATGCATAAA
gi|45875 : GCCTCTCTCAAATTATATGCATTCCAGACATTCCATTATCCAA-G--CGAGATTAGGAGgaagacgctatacacca
gi|45876 : TATATGCATGCCAACCATTTCATTATCAGA-A--CGAGGCGAGGAGC-----ACA-------------TAGC-AGACGGCTATA--ATTTCATAGGGAAATGGCTACAC----ATCGACATGGGATGCTTTCTCGAGATCTTTTCAAGAG-TG-----GTT-------GTGTATCAGATAGCAGATCAGATTC-------------C-----A--TA-ACATTATTAAGGGACC--TGTATT-AG-TAAACAATGGA-TA--TATTAAAAGCGAAATACGCCGAGAT-TAGGGTT-------------A----GTT---AT-CATGTTTATATATTTTTCTA--CTATTGTTTTGAATTT-TAAAT----ATATGATTGTTTTT-TG--TTTTT-ATTTG--ACCAATGCAATAACATCAAA------TTCTG--TTATAT---TT--TAAT
gi|45877 : TACATGCCAGATATTCCATTATCCAA-G--TGCGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGATGACTATA--ACTATATAGGGAAATGGCTACACCCATATCAACTT----TAGTATTTTGAGATCTGGTCAAGAT-TGTTTT-GTTCCATTTTGAATATCAGATGGCAGATTAGATTCTTCCCTTGATTTCC-----A--TA-AAATTGTTAAGGGCCC--TGTG-TTAG-TAAACAA---CTTG--TAT--AAAGTAAAATAAGGCGAGATGGAGGACTACATTGCAATGTAA----ATT---AT-CATGTTTAAATATCTATCTA--TTATTGTTATGAATTT-TGAAT----ATCTTA-----G---TGTATTTTT-ATTTAAAATAAATACA--AACTTTAAAAG---CATTTA--TTTTTT-A-AT--TGATCAAT--GCAAAA--ATCATAACATGTAACAA----A---------TTATGTGATCTT--------T-TTTTA-----T-------T---T--CT-AACAAGA----AAACAGTTTGT----GTTACCG---TATTAATTATAAATTATTATAAATACACACCTTATAAACACAATTTAATTGAGA-TGTGAACATA---GTA-----TTATATAT-AACAAGT-TATTGTAAG-TATTTTAGAATATTGAATAATATTTGTATCTTTCATTATAGGATGAAAATGGACTGTATGTATAA-----------------AGAAG---AAACCAGAACTGT-AACCAGAAGAttctaacaagcaaatacaagtgaaaccatttgtgttactgtattactcattataaacattattttatttgcatgtggacatagtagcctattacatacaacactttattgtcagtattttagaatattaaataatatttgcatctttcattatagggtgaacatggactgtatgaataaagaagaaaaccaaccctgtaaaccagaaga
gi|45865 : ATCCAA-G--CGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGATGACTATATAACTGCATAGGAAAATGGCTACACCCCTATCAACTTGGGGTGATATTTTGAGACCTGGACAAAAT-TGTTTT-GTTTCATTTTGGATATCAGACAGTAGATCAGATTCTTCCCTTGATTTTC-----A--CA-ACATTATTAAGGGACC--TGTG-T-AA-TAAATAA---ATTG--TAT--AAAGGAAAATAAGGTGAGATAGAGGACTACATTGCAATGTAA----GTT---AT-CATGTTTACATATCTATCTA--TTATTGTAATGAATTT-TAAAT----ATCTTATTATTGTTGTTT-TTTTT-ATTTGAAATAAATACA--AACTTTAAAAA---CATCTA--TT-TTT-C-TT--TAATATATATGCATAA--ACCGCAGCATGTAACAACA-CA---------TTA--------T--------G-TTATA-----T-------A---A--AG-AAAAA--AGTGAAACAATTTGT----GTTACCG---TATT----------------------ACGCCTTACAAACATAATTTTATAGACA-TGTGAACAAA---GTA-----TTATATAT-AACAATT-TATTGTCAA-TATTTTAGAATATTGAATACTATTTGTATCTTTCATTTTAGGGTGGGAATGGACTGTATGA--------------------------ATAAATCCAGCACTGTAAACCAGAAGATA
gi|45878 : aggcctctctcaaattttatgcatgccagacatatggtatgataccccacctagtcacagtatactcccatcgggccgaccaggcCAGATTACAAATCAGATATTTCCCTT-ATTTTCG----A--TACACA-TCTTAAGAATTC--TTTG-T-AAGTAAGCAA-----TGAATAT--AAATCAAAAAAAGAAGATATGGAGTATCAATTTTCAA-GTAATACTGTTTATATATATATTGATATATTTATATA--TTATTGTTaaacctgcactgtaaaccagaaga
gi|45879 : ----GTT---AA-CGTGTTTACATATCTATTTA--TTATTGTTATGAAATA-TAAGT----ATCGTACTGT--TT-TG-----TG-ATTTGAAATAAAGACA--ATC-TTAAAAA---CATTTAGTTTGTAT---TT--AAACA-AT--GCAAAAATATAACA-TATGTAACAACA-AATACTTTTTGTTA--------T--------T-TCTAA-----C-------A---A--GG-AAAGGAAAGGGATATAGTTCATTTTAGTTACCGTTTTATT----------------------ACAC---ATAAACATAATTGTATTTACA-TTTGA--ATG---ATA-----TTGTTTAA-AAT-ATT-TAT
gi|45876 : --AATTTTAAATA---TATG-A--TTGTTT-T-TTGTTTTTATTT--G-------ACCA----ATGCAATAACATCAAATTCTG--TTA--------T--------A-TTTTAATTTCT-------A---ACAAGCAAATACAAGTGAAACCATTTGT----GTTACTG---TATT----------------------ACTCATTATAAACATTATTTTATTTGCA-TGTGGACATA---GTAGCCTATTACATAC-AACACTT-TATTGTCAG-TATTTTAGAATATTAAATAATATTTGCATCTTTCATTATAGGGTGAACATGGACTGTATGAATAA-----------------AGAAGA-AAA-CCAACCCTGTAAACCAGAAGA
gi|45880 : tatatgcatgccaaccatttcattatcagaacgaggcgaggagcacatagcagacggctataatttcatagggaaatggctacacatcgacatgggatgctttctcgagatcttttcaagagtggttgtgtatcagatagcagatcagattccataacattattaagggacctgtattagtaaacaatggatatattaaaagcgaaatacgccgagattagggttagttatcatgtttatatatttttctactattgttttgTAAAAACTTAATTTT-CAAAT--TATGAAC-TACCGGTA-----CT-TAAATCAATAATT--------AGATATTTTAGAATATTGAATACTATTTGTATCTTTCATATTAGGGTGGGAATGGACTGTATGAATAAATTCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACTAGAAGA
Alignments
lowQualScore : 111 1111111111 444444444444444 2222222222222222222222
lowQualScore : 2 22 2 2 99 2 77777777 33 0 2 1 2 33 2 4444 2 2 4444 9 4 5555 2 111 55 33 2 2 0 555555 444 444 55555 2 2 55555 2 33 2 22 5 33 2 5555 777 2 555 33 2 1 33 6666 2222222222 77777 555555555555555 555 6666 555 5555555555555555555555 2 444 66666 2 2 77777 888888
lowQualScore : . .. . . .. . ........ .. . . . . .. . .... . . .... . . .... . ... .. .. . . . ...... ... ... ..... . . ..... . .. . .. . .. . .... ... . ... .. . . .. .... .......... ..... ............... ... .... ... ...................... . ... ..... . . ..... ......
lowQualScore : 1 88 2 2 22 2 88888888 11 4 2 0 1 66 1 5555 1 2 7777 4 7 0000 4 555 66 22 5 5 1 111111 111 111 99999 4 2 99999 4 22 5 77 3 77 7 7777 999 2 111 99 9 8 99 1111 5555555555 11111 000000000000000 000 1111 000 4444444444444444444444 7 777 77777 7 7 11111 222222
consensus : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCGA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGNCAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTATAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACCAGAAGATA
Reference ( family-765 ) : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCGA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGNCAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTATAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACCAGAAGATA
gi|45858 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-AATTTCAGATAGTAGAC-CCGATTC----CTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTTC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-ATTA----CAAACTTTAAAAA---CATT--TTTTTT-C-TGTA--ATAT-ATGCATAAATCGCAGC--ATGTACCAACACA----ATATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTT----------------------CGCCTTATAAACATAATTTTATAGACATGTT-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAGTATTTTAGAATATTGAATAATATTTGTATATTTCATTATAGGATGGGAATGGACTGTATGAATA-----AAT------CAAGCACTGTAAATTAGAAGATAAAACCAGCACTGAAAACCAGAAGA
gi|45859 : AGGCCACTCTCAAATTATATGCATGCCAGACATTCCATTATCCAT--GCGAGGTTTGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTTCCTTGATTTTC-GTA-ATATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAAATGGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGC-----TTACATATCTAT-CTATTA-TTGTAATAAAT-----TTTAAA-TATAT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAAAATTAAAAA---CATTTA-TTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAAAAGTGAAACAATTTGT----GTTACCG---TATAG----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AGCATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTAAAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACCAGAAGATA
gi|45860 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGAAGACTATA--ACTACAAATGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTTGACACAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CCGATTC----TTCCCTTGATTTTC-ATA-ACAGTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGATTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTTTGAAT-----TTTAAA-CATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTGTTT-C-TTTA--ATAT-ATGCATAAACCGCAGT--ATGTAACAACACA----TTATT----------TTTT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAGTATTTTAGAATATTGAATAATATTTGTATATTTCATTATAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCTCTGTAAATTAAAAGATAAAACCAGCACTGTAAACCAGAAGATA
gi|45861 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GTGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACAAATATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACGAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TAT-AA-T----AAA-CAA---ATTG--TAC--AAAGCAAAA-TAAGGCGAGATAGAGGGCTAC-ATTGCAATGTAA----G-TTAT---CA---AGT-----TTATATATCTAT-CTATTA-TTGTAATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----TAAACTTT-AAAG---CATATATTTTTT-T-TTTA--AAAT-ATGCATAAACCACAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAAAAATTTGT----GTTACCG---TATTA----------------------CGCCTTGTAAACATAATTTTATAGACATGTG-TACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATACTGAATAATATTTGTATCTTTCATTATAGGGTGGGATTGAACTGTATGAATA-----AAT------CCAGCACTGTAAACC-GAAGATAAAACCAGCACTGTTAACCAGAAGATA
gi|45862 : AGGCCTCTCTCAAATTATATGCATGCCTGACATTCCACTATCCAA--GCAAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGG---ATATTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTTCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTG--------------TTAT---CA---TGT-----TTACATACCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAC-----AT---------------A---AAGAAAGAGAATTGAAACAATTTGT----GTTACCG---TATAA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AAC--A---ATA-----TTATATAT-AACAACT-TGTGGTCAATATTTTAGAAAATTGAATAATATTTGTTTCTTTCATTAAAGGGTGGGAATGGACTGTATGAATA-----AAT------CAAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACGAGAAGATA
gi|45863 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAAC-AGACGACTATA--CCTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTTCATTTTG-GATATCAG---------------TC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATGG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----G-TTTT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTTTATTTGA--AATA-AATA----CAAACTTAAAAAAACCCATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAAATACAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATTT-CACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTATTTACTTTATTATAGGGTGGGAATGGACTGTATGAAGA-----ATT------CCAGTACTGTAAATCAGAAGATAAAACCAGCACTGCAAACCAGAAGATA
gi|45864 : AGGCCTTTCTCAAATTATATGCATGCCAAACATTCCATTATACAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATATAACTACATAGGAA-AAAGGTTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-AATATCAGATAGTAGAT-CAGATTC----TTCCCTTGATTT---------------AAGGGACCTG----TGT-AA-T----AAA-CAA---ATTA--TAT--AAAGCATAA-TAAGGCGAGATAGAGGGCTCC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATACCGAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATAACTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTAAAAAA---CATCTATTTTTTTC-TTTA--ATAT-ATGCATAAACTGCGGC--ATGTAACAACACA----TTATG----------TTAT-----AC---------------A---AAGAAAGAGAAGTGAAACA-TTTGT----GTTACCG---TATCA----------------------CGCCTTATTAACATCATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTACAGGGTGGGAATTGACTGTATGCATA-----AAC------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAATCAGAAGATA
gi|45865 : AGGCCTCTCTCAAATTTTATGCATGCCAGACAT
gi|45865 : ATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGATGACTATATAACTGCATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTTCATTTTG-GATATCAGACAGTAGAT-CAGATTC----TTCCCTTGATTTTC-ACA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-TAA---ATTG--TAT--AAAGGAAAA-TAAGGTGAGATAGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTAATGAAT-----TTTAAA-TATCT--TATTATTGTTGTTT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTA-TTTTT-C-TTTAATATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAA--AAAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTACAAACATAATTTTATAGACATGTG-AACAAA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATACTATTTGTATCTTTCATTTTAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCTGCACTGTAAACCAGAAGAatggtatgataccccacctagtcacagtatactcccatcgggccgaccaggcatccaagcgaggttaggagctcatcacactaccagctgattagcagatgactatataactgcataggaaaatggctacacccctatcaacttggggtgatattttgagacctggacaaaattgttttgtttcattttggatatcagacagtagatcagattcttcccttgattttcacaacattattaagggacctgtgtaataaataaattgtataaaggaaaataaggtgagatagaggactacattgcaatgtaagttatcatgtttacatatctatctattattgtaatgaattttaaatatcttattattgttgttttttttatttgaaataaatacaaactttaaaaacatctatttttctttaatatatatgcataaaccgcagcatgtaacaacacattatgttatataaagaaaaaagtgaaacaatttgtgttaccgtattacgccttacaaacataattttatagacatgtgaacaaagtattatatataacaatttattgtcaatattttagaatattgaatactatttgtatctttcattttagggtgggaatggactgtatgaataaatccagcactgtaaaccagaagataaaacctgcactgtaaaccagaaga
gi|45866 : aggcctctctcaaattttatgcatgccagacatatggtatgataccccacctagtcacagtatactcccatcgggccgaccaggcAGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATAAGC-AGACTACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAGCTTGGGGTGATAGTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-GATATCAG---------------TC----TTCCCTTGATTTTC-AGA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG------------------------AGATGGGGAACTAC-ATAGCAATGTAA----G-TTAC---CA---TGC-----TTACATATATAT-CTATTA-TTGTTATGAAT-----TTTTAA-TATCT--TATTAGTGTT-TGT-TTTTT-ATTCGA--AATA-AATA----AAAACTTTACAAA---CATCTATTTT-T-C-TTTA--ATAT-ATGCATAAATCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACAG---TATTA----------------------CGCCTTATAATCATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TGTTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTA---GGCGGGAATGGACTGTATGAATA-----AAT------TCAGCACTGTAAACCAGAAGATAAAACTAGCACTGTAAACCAGAAGATA
gi|45867 : AGGTCTCTCTTAAATTATATGCATGCCACCCATTCCATTAACAGA--ACAAGGCTAAGGGCTCATCACGCTACCAGCTA-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGTAACACCC-------ATA--TCAATTTGGGAATATATTTTGA-AATCTGGTCAAGATCGTTTT-GTTCTATTATG-AATATCAGATAGCAGAT-CAGATTC----TTCCCATGATTTCT-GTA-AAATTATTAAGGGATCTA----TGT-AAGT----AAA-CAATT-ATTG---AT--A
gi|45868 : AAGCTTCTATCAAATTATATGCATGCCAGACATTTCATTATAAGA--ACGAAGCCAGGAGCTCATAACACTACCAACTG-ATGAGC-AGACTAATATA--ACTACATAGGTA-AATGGCTACACAT-------ATA--TCAACAT-AGATAATAATTTGA-GTATTTATCGAGTGTGTTAT-GTTCCATTTAG-AACATCAGATAGCAGAT-CAGATTA----TTTCCTTGATTTTC-ATC-TAATTCTTAAGGAACCTG----Tt
gi|45869 : AGGCCTCTCGCAAATTATATGCATTCGAGACATACTATTATA-GAATGCGAA--TACGAGCTCATAGCACTACCAGCTG-ATCAGC-AGACTTCTATA--AC-ACAC--GAA-AATGGCTACACTT-------TTA--TCGACATGGGATGATATTTT-A-AATCTTGTCAAAAATGTTGT-GTTCCCTTTTA-AAGATC
gi|45870 : AGACCTCTCTCAAATTGTATGCATACCAGAGATACCAATCTCAGA--ACGAGGATA--AGCAGA-CACA---------G-AT--GT-AAACAAC---A--CCT---TAGGAGTAATGGCTACTTCCACTGAAGCTAGCTCATCTTCAAGTAAAA----AAGGATCTAACTTTCATTGTTGT-GTGCCATATTGCAAT-TCAGATTCTAGAT-ATGATGCAACATTAC----ATTTTC-ATC-ACATTCCTAGTGAATCAG--------AA-TTGAAAAA-GAA---ATGGA-TTT-----GTAAAA-TAAGACGGGATGAAGGCCCCCTATT-CAGGGTAA----G--TA----------GT-----T------TCTAT-TAATTA-TAG--ATGAGTTGATATTTAAAGTATAT--TA
gi|45871 : AGACCTCTCTCAAATTGTATGCATGCCTTAGATTCCATAATCAGA--ACGAG
gi|45871 : TGTTTT-GTTTAATTATG-TGTATCTGATGGCAGATACAA-------------TCAGTTTTC-ACA--CATTTCCAAAGGA--TGAAAGTTT-AA-G----AAAACAATATATTG--TAA--AATGTAAAAATCAGAAGAGATGAGGGACCCC-TTTTCAAGGTAA------TTAT---TACTTTGTATTCCTT-CAAGTTTATTCTATTA-TATCTATATAC-----T---AG-TATTTACTATTATTTAT-TGT-TTaccgggtgagcaaacaaacttagcaggatcatggctactggtagaagtagtgcttgagtgttttgtttaattatgtgtatctgatggcagatacaatcagttttcacacatttccaaaggatgaaagtttaagaaaacaatatattgtaaaatgtaaaaatcagaagagatgagggaccccttttcaaggtaattattactttgtattccttcaagtttattctattatatctatatactagtatttactattatttattgttta
gi|45872 : agacctctctcaaattgtatgcatgccttagattccataatcagaacgagaccgggtgagcaaacaaacttagcaggatcatggctactggtagaagtagtgcttgagGGACCCTCTAAAATTATATGCATGCCAGACGTTCCAGTATGTAA--ATGAGGTGAGGAGCTCATAACACTACTAGCGGCACTAGCTACACTACTACA--ACCACAAAGGAT-AATGGCTACACCT-------ATA--TTGACATAGGATCCTATTTTGC-GATCTTGTCAAA--TG--GT-GTTCCCTTT------------CAACAGAT-CATATTT----TCCCCTTG--TTCC-Aa
gi|45873 : GTCTCTCTCAAATTGTATGCATGCCAGACATTTCATTATCAGA--GCGAGGCTAGGAGCTCATCTCACTACCAGCTG-ATTTGC-AGACGACTATATAACTACATAGGAA-AATGGCTAC--CC-------ATA--TCAGCTTGGGATGGTACTTTGA-GATCTGGTCAAGATTGTTTTTGTTCCATTATG-AAT--CAGATAGCAGAT-CAGATTC----TTCCCTTGATTTCC-ATA-AAATTATTAAGGGACCTG----TGTTAG-T----AAA-CAT---ATTG--TAT--AAAGCAAAA-TAAGGAGAGACGGAGGACCAC-ATGGCAATGTTA----A-TTAT---CA---TGT-----T-ACATATCTAT-CTATTA-TTGTTGTGAAA-----TTTAAA-TATCT--AATTGTTTGT-TGT-TTTTTTATTTAA--AATA-AAAT----CAAACTTTAAAAA---CATTTATATTTT-A-TTCG--ATCA-ATGCAAAAACCATAAC--ATGTAACAACACA----TTATG----------TTAT-----ATTTTATTCCT------AGCTAGGAAAGAGAA---------TTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATTGCCATGTG-AACATA---GTA-----TTATATTC-AACAATT-TATTGGCAATATTTTAGAATATTGAATAATATTTTTATCTTTCATTATA-GGTGGAAATGAACTGTATGAATACGAAGAAA------CAAGCACTGTTAACCAGAAGA
gi|45874 : GCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCAGA--GCGAGGCTTGGAGCTCATCACACTACCAGCTG-ATTAGC-AGATGACTA---------------A-AATGGCTACACCC-------ATA--TCAACTTAGGATGATATTTTGA-GATCTGGTCAAGATTGTTTT-GTTCCATTATG-AATATCAGATAGCAGAT-CAAATTC----TT--CTTGATTTCC-ATC-AAATTATTAAGGGACCTG----TGTCAG-T----AAA-CAC---ATTA--TAT--AAAGCAAAA-TAAGGAGAGATGGAGGACCAC-ATGGCAATG-----------------------------TTACATATCTAT-CTATTA-TTGTTACGAAT-----TTTAAA-TAGCT--TATTAT--TT-TG---TTTT-ATTCAA--AAT--AATA----CAAACTTTAAAAAT--CATTCATTTTTT-TATGTG--ATCA-ATGCAAAAAACG-------TGTAACAACAAA----TTATG----------TTAT-----ATATTTTTATTTCTAACA---AGGAAAGAGAAATGAAACCATTTGT----GTTACCC---TATTA----------------------CGCCTTATAAACATATTTTTATTGACAT-TGTAACATA---GTA-----TTATATAT-AACAATTCTACTGTCACTATTTTAGAACATTGAATAATATGTG------TCATTATAGGGAGGAAATAGAATGTATGCATA-----AAG------AAGACGCTATACACCA
gi|45875 : GCCTCTCTCAAATTATATGCATTCCAGACATTCCATTATCCAA--GCGAGATTAGGAG
gi|45876 : TATATGCATGCCAACCATTTCATTATCAGA--ACGAGGCGAGGAGC-----ACA-------------TAGC-AGACGGCTATA--ATTTCATAGGGA-AATGGCTACAC-----------A--TCGACATGGGATGCTTTCTCGA-GATCTTTTCAAGAGTG-----GTT-------G-TGTATCAGATAGCAGAT-CAGATTC-----------------C-ATA-ACATTATTAAGGGACCTG----TATTAG-T----AAA-CAATGGAT-A--TATTAAAAGCGAAA-TACGCCGAGATT-AGG--------------GTTA----G-TTAT---CA---TGT-----TTATATATTTTT-CTACTA-TTGTTTTGAAT-----TTTAAA-TATAT--GATTGTTTTT-TG--TTTTT-ATTTGACCAATGCAATAACATCAAATTCT
gi|45876 : TTAGTTATCATG--------TTTATA-TATTT--TTCTACTATT--GT-TTTGA-ATTTTA--AATA-TATG---------------------AT-TGTTTTTT-G-TTTT---TAT-TTG-----ACCAATGC--A-ATAACATCAAA----TTCTG----------TTAT-----ATTTTAATTTCTAAC--A---AGCAAATACAAGTGAAACCATTTGT----GTTACTG---TATTA----------------------CTCATTATAAACATTATTTTATTTGCATGTG-GACATA---GTAGCCTATTACATAC-AACACTT-TATTGTCAGTATTTTAGAATATTAAATAATATTTGCATCTTTCATTATAGGGTGAACATGGACTGTATGAATA-----A-----------------------AGAAG--AAAACCAACCCTGTAAACCAGAAGAgttatattttaatttctaacaagcaaatacaagtgaaaccatttgtgttactgtattactcattataaacattattttatttgcatgtggacatagtagcctattacatacaacactttattgtcagtattttagaatattaaataatatttgcatctttcattatagggtgaacatggactgtatgaataaagaagaaaaccaaccctgtaaaccagaaga
gi|45877 : tatatgcatgccaaccatttcattatcagaacgaggcgaggagcacatagcagacggctataatttcatagggaaatggctacacatcgacatgggatgctttctcgagatcttttcaagagtggttgtgtatcagatagcagatcagattccataacattattaagggacctgtattagtaaacaatggatatattaaaagcgaaatacgccgagattagggTACATGCCAGATATTCCATTATCCAA--GTGCGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGATGACTATA--ACTATATAGGGA-AATGGCTACACCC-------ATA--TCAACTT----TAGTATTTTGA-GATCTGGTCAAGATTGTTTT-GTTCCATTTTG-AATATCAGATGGCAGAT-TAGATTC----TTCCCTTGATTTCC-ATA-AAATTGTTAAGGGCCCTG----TGTTAG-T----AAA-CAA---CTTG--TAT--AAAGTAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----A-TTAT---CA---TGT-----TTAAATATCTAT-CTATTA-TTGTTATGAAT-----TTTGAA-TATCT--TA-----G---TGTATTTTT-ATTTAA--AATA-AATA----CAAACTTTAAAAG---CATTTATTTTTT-A-ATTG--ATCA-ATGCAAAAATCATAAC--ATGTAACAA---A----TTATGTGATCTTTTTTTAT-----TT---------------C---TAACAAGA------AAACAGTTTGT----GTTACCG---TATTAATTATAAATTATTATAAATACACACCTTATAAACACAATTTAATTGAGATGTG-AACATA---GTA-----TTATATAT-AACAAGT-TATTGTAAGTATTTTAGAATATTGAATAATATTTGTATCTTTCATTATAGGATGAAAATGGACTGTATGTATA-----AAGAAGAAACCAGAACTGT-AACCAGAAGA
gi|45878 : CAGATTACAAAT-CAGATAT----TTCCCTT-ATTTTCGATACACATC-TTAAGAATTCTT----TGT-AAGT----AAG-CAA-----TGAATAT--AAATCAAAA-AAAGAAGATATGGAGTATCAA-TTTTCAA-GTAATACTGTTTATATATA---TAT-----TGATATATTTAT-ATATTA-TTGTT
gi|45879 : ----G-TTAA---CG---TGT-----TTACATATCTAT-TTATTA-TTGTTATGAAA-----TATAAG-TATCG--TACTGT--TT-TG-----TG-ATTTGA--AATA-AAGA----CAATC-TTAAAAA---CATTTAGTTTGT-A-TTTA--A-ACAATGCA-AAAATATAACATATGTAACAACAAATACTTTTTG----------TTATTTCTAAC---------------A---AGGAAAGGAAAGGGATATAGTTCATTTTAGTTACCGTTTTATTA----------------------CAC---ATAAACATAATTGTATTTACATTTG-A--ATG---ATA-----TTGTTTAA-AAT-ATT-TAT
gi|45880 : TAAAAACTTAATTTT-CAAAT-TATG-AAC-TACCGGTA-----CT-TAAATCAATAATT--A-----GATATTTTAGAATATTGAATACTATTTGTATCTTTCATATTAGGGTGGGAATGGACTGTATGAATA-----AAT------TCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACTAGAAGA
Alignments
lowQualScore : 111 1111111111 444444444444444 2222222222222222222222
lowQualScore : 2 22 2 2 99 2 77777777 33 0 2 1 2 33 2 4444 2 2 4444 9 4 5555 2 111 55 33 2 2 0 555555 444 444 55555 2 2 55555 2 33 2 22 5 33 2 5555 777 2 555 33 2 1 33 6666 2222222222 77777 555555555555555 555 6666 555 5555555555555555555555 2 444 66666 2 2 77777 888888
lowQualScore : . .. . . .. . ........ .. . . . . .. . .... . . .... . . .... . ... .. .. . . . ...... ... ... ..... . . ..... . .. . .. . .. . .... ... . ... .. . . .. .... .......... ..... ............... ... .... ... ...................... . ... ..... . . ..... ......
lowQualScore : 1 88 2 2 22 2 88888888 11 4 2 0 1 66 1 5555 1 2 7777 4 7 0000 4 555 66 22 5 5 1 111111 111 111 99999 4 2 99999 4 22 5 77 3 77 7 7777 999 2 111 99 9 8 99 1111 5555555555 11111 000000000000000 000 1111 000 4444444444444444444444 7 777 77777 7 7 11111 222222
consensus : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCGA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGNCAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTATAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACCAGAAGATA
Reference ( family-765 ) : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCGA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGNCAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTATAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACCAGAAGATA
gi|45858 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-AATTTCAGATAGTAGAC-CCGATTC----CTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTTC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-ATTA----CAAACTTTAAAAA---CATT--TTTTTT-C-TGTA--ATAT-ATGCATAAATCGCAGC--ATGTACCAACACA----ATATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTT----------------------CGCCTTATAAACATAATTTTATAGACATGTT-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAGTATTTTAGAATATTGAATAATATTTGTATATTTCATTATAGGATGGGAATGGACTGTATGAATA-----AAT------CAAGCACTGTAAATTAGAAGATAAAACCAGCACTGAAAACCAGAAGA
gi|45859 : AGGCCACTCTCAAATTATATGCATGCCAGACATTCCATTATCCAT--GCGAGGTTTGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTTCCTTGATTTTC-GTA-ATATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAAATGGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGC-----TTACATATCTAT-CTATTA-TTGTAATAAAT-----TTTAAA-TATAT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAAAATTAAAAA---CATTTA-TTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAAAAGTGAAACAATTTGT----GTTACCG---TATAG----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AGCATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTAAAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACCAGAAGATA
gi|45860 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGAAGACTATA--ACTACAAATGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTTGACACAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CCGATTC----TTCCCTTGATTTTC-ATA-ACAGTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGATTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTTTGAAT-----TTTAAA-CATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTGTTT-C-TTTA--ATAT-ATGCATAAACCGCAGT--ATGTAACAACACA----TTATT----------TTTT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAGTATTTTAGAATATTGAATAATATTTGTATATTTCATTATAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCTCTGTAAATTAAAAGATAAAACCAGCACTGTAAACCAGAAGATA
gi|45861 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GTGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACAAATATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACGAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TAT-AA-T----AAA-CAA---ATTG--TAC--AAAGCAAAA-TAAGGCGAGATAGAGGGCTAC-ATTGCAATGTAA----G-TTAT---CA---AGT-----TTATATATCTAT-CTATTA-TTGTAATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----TAAACTTT-AAAG---CATATATTTTTT-T-TTTA--AAAT-ATGCATAAACCACAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAAAAATTTGT----GTTACCG---TATTA----------------------CGCCTTGTAAACATAATTTTATAGACATGTG-TACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATACTGAATAATATTTGTATCTTTCATTATAGGGTGGGATTGAACTGTATGAATA-----AAT------CCAGCACTGTAAACC-GAAGATAAAACCAGCACTGTTAACCAGAAGATA
gi|45862 : AGGCCTCTCTCAAATTATATGCATGCCTGACATTCCACTATCCAA--GCAAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGG---ATATTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTTCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTG--------------TTAT---CA---TGT-----TTACATACCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAC-----AT---------------A---AAGAAAGAGAATTGAAACAATTTGT----GTTACCG---TATAA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AAC--A---ATA-----TTATATAT-AACAACT-TGTGGTCAATATTTTAGAAAATTGAATAATATTTGTTTCTTTCATTAAAGGGTGGGAATGGACTGTATGAATA-----AAT------CAAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACGAGAAGATA
gi|45863 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAAC-AGACGACTATA--CCTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTTCATTTTG-GATATCAG---------------TC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATGG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----G-TTTT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTTTATTTGA--AATA-AATA----CAAACTTAAAAAAACCCATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAAATACAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATTT-CACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTATTTACTTTATTATAGGGTGGGAATGGACTGTATGAAGA-----ATT------CCAGTACTGTAAATCAGAAGATAAAACCAGCACTGCAAACCAGAAGATA
gi|45864 : AGGCCTTTCTCAAATTATATGCATGCCAAACATTCCATTATACAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATATAACTACATAGGAA-AAAGGTTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-AATATCAGATAGTAGAT-CAGATTC----TTCCCTTGATTT---------------AAGGGACCTG----TGT-AA-T----AAA-CAA---ATTA--TAT--AAAGCATAA-TAAGGCGAGATAGAGGGCTCC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATACCGAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATAACTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTAAAAAA---CATCTATTTTTTTC-TTTA--ATAT-ATGCATAAACTGCGGC--ATGTAACAACACA----TTATG----------TTAT-----AC---------------A---AAGAAAGAGAAGTGAAACA-TTTGT----GTTACCG---TATCA----------------------CGCCTTATTAACATCATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTACAGGGTGGGAATTGACTGTATGCATA-----AAC------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAATCAGAAGATA
gi|45865 : AGGCCTCTCTCAAATTTTATGCATGCCAGACAT
gi|45865 : ATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGATGACTATATAACTGCATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTTCATTTTG-GATATCAGACAGTAGAT-CAGATTC----TTCCCTTGATTTTC-ACA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-TAA---ATTG--TAT--AAAGGAAAA-TAAGGTGAGATAGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTAATGAAT-----TTTAAA-TATCT--TATTATTGTTGTTT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTA-TTTTT-C-TTTAATATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAA--AAAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTACAAACATAATTTTATAGACATGTG-AACAAA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATACTATTTGTATCTTTCATTTTAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCTGCACTGTAAACCAGAAGAatggtatgataccccacctagtcacagtatactcccatcgggccgaccaggcatccaagcgaggttaggagctcatcacactaccagctgattagcagatgactatataactgcataggaaaatggctacacccctatcaacttggggtgatattttgagacctggacaaaattgttttgtttcattttggatatcagacagtagatcagattcttcccttgattttcacaacattattaagggacctgtgtaataaataaattgtataaaggaaaataaggtgagatagaggactacattgcaatgtaagttatcatgtttacatatctatctattattgtaatgaattttaaatatcttattattgttgttttttttatttgaaataaatacaaactttaaaaacatctatttttctttaatatatatgcataaaccgcagcatgtaacaacacattatgttatataaagaaaaaagtgaaacaatttgtgttaccgtattacgccttacaaacataattttatagacatgtgaacaaagtattatatataacaatttattgtcaatattttagaatattgaatactatttgtatctttcattttagggtgggaatggactgtatgaataaatccagcactgtaaaccagaagataaaacctgcactgtaaaccagaaga
gi|45866 : aggcctctctcaaattttatgcatgccagacatatggtatgataccccacctagtcacagtatactcccatcgggccgaccaggcAGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATAAGC-AGACTACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAGCTTGGGGTGATAGTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-GATATCAG---------------TC----TTCCCTTGATTTTC-AGA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG------------------------AGATGGGGAACTAC-ATAGCAATGTAA----G-TTAC---CA---TGC-----TTACATATATAT-CTATTA-TTGTTATGAAT-----TTTTAA-TATCT--TATTAGTGTT-TGT-TTTTT-ATTCGA--AATA-AATA----AAAACTTTACAAA---CATCTATTTT-T-C-TTTA--ATAT-ATGCATAAATCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACAG---TATTA----------------------CGCCTTATAATCATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TGTTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTA---GGCGGGAATGGACTGTATGAATA-----AAT------TCAGCACTGTAAACCAGAAGATAAAACTAGCACTGTAAACCAGAAGATA
gi|45867 : AGGTCTCTCTTAAATTATATGCATGCCACCCATTCCATTAACAGA--ACAAGGCTAAGGGCTCATCACGCTACCAGCTA-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGTAACACCC-------ATA--TCAATTTGGGAATATATTTTGA-AATCTGGTCAAGATCGTTTT-GTTCTATTATG-AATATCAGATAGCAGAT-CAGATTC----TTCCCATGATTTCT-GTA-AAATTATTAAGGGATCTA----TGT-AAGT----AAA-CAATT-ATTG---AT--A
gi|45868 : AAGCTTCTATCAAATTATATGCATGCCAGACATTTCATTATAAGA--ACGAAGCCAGGAGCTCATAACACTACCAACTG-ATGAGC-AGACTAATATA--ACTACATAGGTA-AATGGCTACACAT-------ATA--TCAACAT-AGATAATAATTTGA-GTATTTATCGAGTGTGTTAT-GTTCCATTTAG-AACATCAGATAGCAGAT-CAGATTA----TTTCCTTGATTTTC-ATC-TAATTCTTAAGGAACCTG----Tt
gi|45869 : AGGCCTCTCGCAAATTATATGCATTCGAGACATACTATTATA-GAATGCGAA--TACGAGCTCATAGCACTACCAGCTG-ATCAGC-AGACTTCTATA--AC-ACAC--GAA-AATGGCTACACTT-------TTA--TCGACATGGGATGATATTTT-A-AATCTTGTCAAAAATGTTGT-GTTCCCTTTTA-AAGATC
gi|45870 : AGACCTCTCTCAAATTGTATGCATACCAGAGATACCAATCTCAGA--ACGAGGATA--AGCAGA-CACA---------G-AT--GT-AAACAAC---A--CCT---TAGGAGTAATGGCTACTTCCACTGAAGCTAGCTCATCTTCAAGTAAAA----AAGGATCTAACTTTCATTGTTGT-GTGCCATATTGCAAT-TCAGATTCTAGAT-ATGATGCAACATTAC----ATTTTC-ATC-ACATTCCTAGTGAATCAG--------AA-TTGAAAAA-GAA---ATGGA-TTT-----GTAAAA-TAAGACGGGATGAAGGCCCCCTATT-CAGGGTAA----G--TA----------GT-----T------TCTAT-TAATTA-TAG--ATGAGTTGATATTTAAAGTATAT--TA
gi|45871 : AGACCTCTCTCAAATTGTATGCATGCCTTAGATTCCATAATCAGA--ACGAG
gi|45871 : TGTTTT-GTTTAATTATG-TGTATCTGATGGCAGATACAA-------------TCAGTTTTC-ACA--CATTTCCAAAGGA--TGAAAGTTT-AA-G----AAAACAATATATTG--TAA--AATGTAAAAATCAGAAGAGATGAGGGACCCC-TTTTCAAGGTAA------TTAT---TACTTTGTATTCCTT-CAAGTTTATTCTATTA-TATCTATATAC-----T---AG-TATTTACTATTATTTAT-TGT-TTaccgggtgagcaaacaaacttagcaggatcatggctactggtagaagtagtgcttgagtgttttgtttaattatgtgtatctgatggcagatacaatcagttttcacacatttccaaaggatgaaagtttaagaaaacaatatattgtaaaatgtaaaaatcagaagagatgagggaccccttttcaaggtaattattactttgtattccttcaagtttattctattatatctatatactagtatttactattatttattgttta
gi|45872 : agacctctctcaaattgtatgcatgccttagattccataatcagaacgagaccgggtgagcaaacaaacttagcaggatcatggctactggtagaagtagtgcttgagGGACCCTCTAAAATTATATGCATGCCAGACGTTCCAGTATGTAA--ATGAGGTGAGGAGCTCATAACACTACTAGCGGCACTAGCTACACTACTACA--ACCACAAAGGAT-AATGGCTACACCT-------ATA--TTGACATAGGATCCTATTTTGC-GATCTTGTCAAA--TG--GT-GTTCCCTTT------------CAACAGAT-CATATTT----TCCCCTTG--TTCC-Aa
gi|45873 : GTCTCTCTCAAATTGTATGCATGCCAGACATTTCATTATCAGA--GCGAGGCTAGGAGCTCATCTCACTACCAGCTG-ATTTGC-AGACGACTATATAACTACATAGGAA-AATGGCTAC--CC-------ATA--TCAGCTTGGGATGGTACTTTGA-GATCTGGTCAAGATTGTTTTTGTTCCATTATG-AAT--CAGATAGCAGAT-CAGATTC----TTCCCTTGATTTCC-ATA-AAATTATTAAGGGACCTG----TGTTAG-T----AAA-CAT---ATTG--TAT--AAAGCAAAA-TAAGGAGAGACGGAGGACCAC-ATGGCAATGTTA----A-TTAT---CA---TGT-----T-ACATATCTAT-CTATTA-TTGTTGTGAAA-----TTTAAA-TATCT--AATTGTTTGT-TGT-TTTTTTATTTAA--AATA-AAAT----CAAACTTTAAAAA---CATTTATATTTT-A-TTCG--ATCA-ATGCAAAAACCATAAC--ATGTAACAACACA----TTATG----------TTAT-----ATTTTATTCCT------AGCTAGGAAAGAGAA---------TTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATTGCCATGTG-AACATA---GTA-----TTATATTC-AACAATT-TATTGGCAATATTTTAGAATATTGAATAATATTTTTATCTTTCATTATA-GGTGGAAATGAACTGTATGAATACGAAGAAA------CAAGCACTGTTAACCAGAAGA
gi|45874 : GCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCAGA--GCGAGGCTTGGAGCTCATCACACTACCAGCTG-ATTAGC-AGATGACTA---------------A-AATGGCTACACCC-------ATA--TCAACTTAGGATGATATTTTGA-GATCTGGTCAAGATTGTTTT-GTTCCATTATG-AATATCAGATAGCAGAT-CAAATTC----TT--CTTGATTTCC-ATC-AAATTATTAAGGGACCTG----TGTCAG-T----AAA-CAC---ATTA--TAT--AAAGCAAAA-TAAGGAGAGATGGAGGACCAC-ATGGCAATG-----------------------------TTACATATCTAT-CTATTA-TTGTTACGAAT-----TTTAAA-TAGCT--TATTAT--TT-TG---TTTT-ATTCAA--AAT--AATA----CAAACTTTAAAAAT--CATTCATTTTTT-TATGTG--ATCA-ATGCAAAAAACG-------TGTAACAACAAA----TTATG----------TTAT-----ATATTTTTATTTCTAACA---AGGAAAGAGAAATGAAACCATTTGT----GTTACCC---TATTA----------------------CGCCTTATAAACATATTTTTATTGACAT-TGTAACATA---GTA-----TTATATAT-AACAATTCTACTGTCACTATTTTAGAACATTGAATAATATGTG------TCATTATAGGGAGGAAATAGAATGTATGCATA-----AAG------AAGACGCTATACACCA
gi|45875 : GCCTCTCTCAAATTATATGCATTCCAGACATTCCATTATCCAA--GCGAGATTAGGAG
gi|45876 : TATATGCATGCCAACCATTTCATTATCAGA--ACGAGGCGAGGAGC-----ACA-------------TAGC-AGACGGCTATA--ATTTCATAGGGA-AATGGCTACAC-----------A--TCGACATGGGATGCTTTCTCGA-GATCTTTTCAAGAGTG-----GTT-------G-TGTATCAGATAGCAGAT-CAGATTC-----------------C-ATA-ACATTATTAAGGGACCTG----TATTAG-T----AAA-CAATGGAT-A--TATTAAAAGCGAAA-TACGCCGAGATT-AGG--------------GTTA----G-TTAT---CA---TGT-----TTATATATTTTT-CTACTA-TTGTTTTGAAT-----TTTAAA-TATAT--GATTGTTTTT-TG--TTTTT-ATTTGACCAATGCAATAACATCAAATTCT
gi|45876 : TTAGTTATCATG--------TTTATA-TATTT--TTCTACTATT--GT-TTTGA-ATTTTA--AATA-TATG---------------------AT-TGTTTTTT-G-TTTT---TAT-TTG-----ACCAATGC--A-ATAACATCAAA----TTCTG----------TTAT-----ATTTTAATTTCTAAC--A---AGCAAATACAAGTGAAACCATTTGT----GTTACTG---TATTA----------------------CTCATTATAAACATTATTTTATTTGCATGTG-GACATA---GTAGCCTATTACATAC-AACACTT-TATTGTCAGTATTTTAGAATATTAAATAATATTTGCATCTTTCATTATAGGGTGAACATGGACTGTATGAATA-----A-----------------------AGAAG--AAAACCAACCCTGTAAACCAGAAGAgttatattttaatttctaacaagcaaatacaagtgaaaccatttgtgttactgtattactcattataaacattattttatttgcatgtggacatagtagcctattacatacaacactttattgtcagtattttagaatattaaataatatttgcatctttcattatagggtgaacatggactgtatgaataaagaagaaaaccaaccctgtaaaccagaaga
gi|45877 : tatatgcatgccaaccatttcattatcagaacgaggcgaggagcacatagcagacggctataatttcatagggaaatggctacacatcgacatgggatgctttctcgagatcttttcaagagtggttgtgtatcagatagcagatcagattccataacattattaagggacctgtattagtaaacaatggatatattaaaagcgaaatacgccgagattagggTACATGCCAGATATTCCATTATCCAA--GTGCGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGATGACTATA--ACTATATAGGGA-AATGGCTACACCC-------ATA--TCAACTT----TAGTATTTTGA-GATCTGGTCAAGATTGTTTT-GTTCCATTTTG-AATATCAGATGGCAGAT-TAGATTC----TTCCCTTGATTTCC-ATA-AAATTGTTAAGGGCCCTG----TGTTAG-T----AAA-CAA---CTTG--TAT--AAAGTAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----A-TTAT---CA---TGT-----TTAAATATCTAT-CTATTA-TTGTTATGAAT-----TTTGAA-TATCT--TA-----G---TGTATTTTT-ATTTAA--AATA-AATA----CAAACTTTAAAAG---CATTTATTTTTT-A-ATTG--ATCA-ATGCAAAAATCATAAC--ATGTAACAA---A----TTATGTGATCTTTTTTTAT-----TT---------------C---TAACAAGA------AAACAGTTTGT----GTTACCG---TATTAATTATAAATTATTATAAATACACACCTTATAAACACAATTTAATTGAGATGTG-AACATA---GTA-----TTATATAT-AACAAGT-TATTGTAAGTATTTTAGAATATTGAATAATATTTGTATCTTTCATTATAGGATGAAAATGGACTGTATGTATA-----AAGAAGAAACCAGAACTGT-AACCAGAAGA
gi|45878 : CAGATTACAAAT-CAGATAT----TTCCCTT-ATTTTCGATACACATC-TTAAGAATTCTT----TGT-AAGT----AAG-CAA-----TGAATAT--AAATCAAAA-AAAGAAGATATGGAGTATCAA-TTTTCAA-GTAATACTGTTTATATATA---TAT-----TGATATATTTAT-ATATTA-TTGTT
gi|45879 : ----G-TTAA---CG---TGT-----TTACATATCTAT-TTATTA-TTGTTATGAAA-----TATAAG-TATCG--TACTGT--TT-TG-----TG-ATTTGA--AATA-AAGA----CAATC-TTAAAAA---CATTTAGTTTGT-A-TTTA--A-ACAATGCA-AAAATATAACATATGTAACAACAAATACTTTTTG----------TTATTTCTAAC---------------A---AGGAAAGGAAAGGGATATAGTTCATTTTAGTTACCGTTTTATTA----------------------CAC---ATAAACATAATTGTATTTACATTTG-A--ATG---ATA-----TTGTTTAA-AAT-ATT-TAT
gi|45880 : TAAAAACTTAATTTT-CAAAT-TATG-AAC-TACCGGTA-----CT-TAAATCAATAATT--A-----GATATTTTAGAATATTGAATACTATTTGTATCTTTCATATTAGGGTGGGAATGGACTGTATGAATA-----AAT------TCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACTAGAAGA
blockSeqs : C AT C T TA T ACTGAAGC GC G A T CA A AACA G C AAAG T G TGAA A TAT AA TA A T TACTGT ATA CTT ATTCC T G TGATA G AC G TA T CC C ACAT ACC T TC AT A T AT TACT TGATCTTTTT TTCTA ATTTTTATTTCTAAC GCT TTTA TTT ATTATAAATTATTATAAATACA T CCG GCCTA C C CGAAG AAGAAA
blockSeqs : C . . . TA . C . . A . G . . . . . C G . . TGG A . . . G . . . . . . . . . T T . . . T C TA . . T . . . . TTTAATTTCTAAC . . . . . . . . . . .
blockSeqs : C . . . TA . C . . A . G . . . . . T . . . TT . . . . G . . . . . . . . . T . . . . . A C . . T . . . . TTTATTCCT . . . . . . . . . . .
blockSeqs : C . . . . . C . . A . G . . . . . T . . . . . . . . G . . . . . . . . . T . . . . . C C . . T . . . . . . . . . . . . . . . .
blockSeqs : C . . . . . C . . A . G . . . . . . . . . . . . . . G . . . . . . . . . T . . . . . C T . . T . . . . . . . . . . . . . . . .
blockSeqs : C . . . . . C . . A . G . . . . . . . . . . . . . . G . . . . . . . . . T . . . . . C C . . T . . . . . . . . . . . . . . . .
blockSeqs : C . . . . . C . . A . A . . . . . . . . . . . . . . G . . . . . . . . . T . . . . . C C . . T . . . . . . . . . . . . . . . .
blockSeqs : C . . . . . C . . A . G . . . . . . . . . . . . . . G . . . . . . . . . T . . . . . C C . . T . . . . . . . . . . . . . . . .
blockSeqs : A . . . . . C . . T . G . . . . . . . . . . . . . . G . . . . . . . . . T . . . . . T C . . A . . . . . . . . . . . . . . . .
blockSeqs : A . . . . . A . . T . A . . . . . . . . . . . . . . A . . . . . . . . . T . . . . . T A . . A . . . . . . . . . . . . . . . .
blockSeqs : A . . . . . A . . T . A . . . . . . . . . . . . . . G . . . . . . . . . T . . . . . T G . . A . . . . . . . . . . . . . . . .
blockSeqs : A . . . . . T . . C . A . . . . . . . . . . . . . . A . . . . . . . . . T . . . . . T A . . . . . . . . . . . . . . . . . . .
blockSeqs : T . . . . . A . . T . T . . . . . . . . . . . . . . G . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : A . . . . . A . . T . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : A . . . . . A . . T . A . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : C . . . . . A . . T . T . . . . . . . . . . . . . . . . . . . . .
blockSeqs : A . . . . . . . . T . A . . . . . .
blockSeqs : C . . . . . .
blockSeqs : . .
blockSeqCons :
originalCons : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCGA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGNCAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTATAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACCAGAAGATA
finalCons : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCGA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGNCAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTATAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACCAGAAGATA
Alignments
lowQualScore : 111 1111111111 444444444444444 2222222222222222222222
lowQualScore : 2 22 2 2 99 2 77777777 33 0 2 1 2 33 2 4444 2 2 4444 9 4 5555 2 111 55 33 2 2 0 555555 444 444 55555 2 2 55555 2 33 2 22 5 33 2 5555 777 2 555 33 2 1 33 6666 2222222222 77777 555555555555555 555 6666 555 5555555555555555555555 2 444 66666 2 2 77777 888888
lowQualScore : . .. . . .. . ........ .. . . . . .. . .... . . .... . . .... . ... .. .. . . . ...... ... ... ..... . . ..... . .. . .. . .. . .... ... . ... .. . . .. .... .......... ..... ............... ... .... ... ...................... . ... ..... . . ..... ......
lowQualScore : 1 88 2 2 22 2 88888888 11 4 2 0 1 66 1 5555 1 2 7777 4 7 0000 4 555 66 22 5 5 1 111111 111 111 99999 4 2 99999 4 22 5 77 3 77 7 7777 999 2 111 99 9 8 99 1111 5555555555 11111 000000000000000 000 1111 000 4444444444444444444444 7 777 77777 7 7 11111 222222
consensus : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCGA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGNCAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTATAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACCAGAAGATA
Reference ( family-765 ) : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCGA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGNCAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTATAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACCAGAAGATA
gi|45858 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-AATTTCAGATAGTAGAC-CCGATTC----CTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTTC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-ATTA----CAAACTTTAAAAA---CATT--TTTTTT-C-TGTA--ATAT-ATGCATAAATCGCAGC--ATGTACCAACACA----ATATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTT----------------------CGCCTTATAAACATAATTTTATAGACATGTT-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAGTATTTTAGAATATTGAATAATATTTGTATATTTCATTATAGGATGGGAATGGACTGTATGAATA-----AAT------CAAGCACTGTAAATTAGAAGATAAAACCAGCACTGAAAACCAGAAGA
gi|45859 : AGGCCACTCTCAAATTATATGCATGCCAGACATTCCATTATCCAT--GCGAGGTTTGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTTCCTTGATTTTC-GTA-ATATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAAATGGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGC-----TTACATATCTAT-CTATTA-TTGTAATAAAT-----TTTAAA-TATAT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAAAATTAAAAA---CATTTA-TTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAAAAGTGAAACAATTTGT----GTTACCG---TATAG----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AGCATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTAAAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACCAGAAGATA
gi|45860 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGAAGACTATA--ACTACAAATGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTTGACACAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CCGATTC----TTCCCTTGATTTTC-ATA-ACAGTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGATTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTTTGAAT-----TTTAAA-CATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTGTTT-C-TTTA--ATAT-ATGCATAAACCGCAGT--ATGTAACAACACA----TTATT----------TTTT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAGTATTTTAGAATATTGAATAATATTTGTATATTTCATTATAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCTCTGTAAATTAAAAGATAAAACCAGCACTGTAAACCAGAAGATA
gi|45861 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GTGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACAAATATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACGAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TAT-AA-T----AAA-CAA---ATTG--TAC--AAAGCAAAA-TAAGGCGAGATAGAGGGCTAC-ATTGCAATGTAA----G-TTAT---CA---AGT-----TTATATATCTAT-CTATTA-TTGTAATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----TAAACTTT-AAAG---CATATATTTTTT-T-TTTA--AAAT-ATGCATAAACCACAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAAAAATTTGT----GTTACCG---TATTA----------------------CGCCTTGTAAACATAATTTTATAGACATGTG-TACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATACTGAATAATATTTGTATCTTTCATTATAGGGTGGGATTGAACTGTATGAATA-----AAT------CCAGCACTGTAAACC-GAAGATAAAACCAGCACTGTTAACCAGAAGATA
gi|45862 : AGGCCTCTCTCAAATTATATGCATGCCTGACATTCCACTATCCAA--GCAAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGG---ATATTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-GATATCAGATAGCAGAT-CAGATTC----TTTCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTG--------------TTAT---CA---TGT-----TTACATACCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAC-----AT---------------A---AAGAAAGAGAATTGAAACAATTTGT----GTTACCG---TATAA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AAC--A---ATA-----TTATATAT-AACAACT-TGTGGTCAATATTTTAGAAAATTGAATAATATTTGTTTCTTTCATTAAAGGGTGGGAATGGACTGTATGAATA-----AAT------CAAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACGAGAAGATA
gi|45863 : AGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAAC-AGACGACTATA--CCTACATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTTCATTTTG-GATATCAG---------------TC----TTCCCTTGATTTTC-ATA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATGG--TAT--AAAGCAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----G-TTTT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATTATTGTT-TGT-TTTTTTATTTGA--AATA-AATA----CAAACTTAAAAAAACCCATCTATTTTTT-C-TTTA--ATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAAATACAGAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATAGACATGTG-AACATA---GTA-----TTATATTT-CACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTATTTACTTTATTATAGGGTGGGAATGGACTGTATGAAGA-----ATT------CCAGTACTGTAAATCAGAAGATAAAACCAGCACTGCAAACCAGAAGATA
gi|45864 : AGGCCTTTCTCAAATTATATGCATGCCAAACATTCCATTATACAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGACGACTATATAACTACATAGGAA-AAAGGTTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-AATATCAGATAGTAGAT-CAGATTC----TTCCCTTGATTT---------------AAGGGACCTG----TGT-AA-T----AAA-CAA---ATTA--TAT--AAAGCATAA-TAAGGCGAGATAGAGGGCTCC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATACCGAT-CTATTA-TTGTTATGAAT-----TTTAAA-TATCT--TATAACTGTT-TGT-TTTTT-ATTTGA--AATA-AATA----CAAACTTAAAAAA---CATCTATTTTTTTC-TTTA--ATAT-ATGCATAAACTGCGGC--ATGTAACAACACA----TTATG----------TTAT-----AC---------------A---AAGAAAGAGAAGTGAAACA-TTTGT----GTTACCG---TATCA----------------------CGCCTTATTAACATCATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTACAGGGTGGGAATTGACTGTATGCATA-----AAC------CCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAATCAGAAGATA
gi|45865 : AGGCCTCTCTCAAATTTTATGCATGCCAGACAT
gi|45865 : ATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGATGACTATATAACTGCATAGGAA-AATGGCTACACCC-------CTA--TCAACTTGGGGTGATATTTTGA-GACCTGGACAAAATTGTTTT-GTTTCATTTTG-GATATCAGACAGTAGAT-CAGATTC----TTCCCTTGATTTTC-ACA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-TAA---ATTG--TAT--AAAGGAAAA-TAAGGTGAGATAGAGGACTAC-ATTGCAATGTAA----G-TTAT---CA---TGT-----TTACATATCTAT-CTATTA-TTGTAATGAAT-----TTTAAA-TATCT--TATTATTGTTGTTT-TTTTT-ATTTGA--AATA-AATA----CAAACTTTAAAAA---CATCTA-TTTTT-C-TTTAATATAT-ATGCATAAACCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAA--AAAAGTGAAACAATTTGT----GTTACCG---TATTA----------------------CGCCTTACAAACATAATTTTATAGACATGTG-AACAAA---GTA-----TTATATAT-AACAATT-TATTGTCAATATTTTAGAATATTGAATACTATTTGTATCTTTCATTTTAGGGTGGGAATGGACTGTATGAATA-----AAT------CCAGCACTGTAAACCAGAAGATAAAACCTGCACTGTAAACCAGAAGAatggtatgataccccacctagtcacagtatactcccatcgggccgaccaggcatccaagcgaggttaggagctcatcacactaccagctgattagcagatgactatataactgcataggaaaatggctacacccctatcaacttggggtgatattttgagacctggacaaaattgttttgtttcattttggatatcagacagtagatcagattcttcccttgattttcacaacattattaagggacctgtgtaataaataaattgtataaaggaaaataaggtgagatagaggactacattgcaatgtaagttatcatgtttacatatctatctattattgtaatgaattttaaatatcttattattgttgttttttttatttgaaataaatacaaactttaaaaacatctatttttctttaatatatatgcataaaccgcagcatgtaacaacacattatgttatataaagaaaaaagtgaaacaatttgtgttaccgtattacgccttacaaacataattttatagacatgtgaacaaagtattatatataacaatttattgtcaatattttagaatattgaatactatttgtatctttcattttagggtgggaatggactgtatgaataaatccagcactgtaaaccagaagataaaacctgcactgtaaaccagaaga
gi|45866 : aggcctctctcaaattttatgcatgccagacatatggtatgataccccacctagtcacagtatactcccatcgggccgaccaggcAGGCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCCAA--GCGAGGTTAGGAGCTCATCACACTACCAGCTG-ATAAGC-AGACTACTATA--ACTACATAGGAA-AATGGCTACACCC-------CTA--TCAGCTTGGGGTGATAGTTTGA-GACCTGGACAAAATTGTTTT-GTTCCATTTTG-GATATCAG---------------TC----TTCCCTTGATTTTC-AGA-ACATTATTAAGGGACCTG----TGT-AA-T----AAA-CAA---ATTG------------------------AGATGGGGAACTAC-ATAGCAATGTAA----G-TTAC---CA---TGC-----TTACATATATAT-CTATTA-TTGTTATGAAT-----TTTTAA-TATCT--TATTAGTGTT-TGT-TTTTT-ATTCGA--AATA-AATA----AAAACTTTACAAA---CATCTATTTT-T-C-TTTA--ATAT-ATGCATAAATCGCAGC--ATGTAACAACACA----TTATG----------TTAT-----AT---------------A---AAGAAAGAGAAGTGAAACAATTTGT----GTTACAG---TATTA----------------------CGCCTTATAATCATAATTTTATAGACATGTG-AACATA---GTA-----TTATATAT-AACAATT-TGTTGTCAATATTTTAGAATATTGAATAATATTTGTATCTTTCATTA---GGCGGGAATGGACTGTATGAATA-----AAT------TCAGCACTGTAAACCAGAAGATAAAACTAGCACTGTAAACCAGAAGATA
gi|45867 : AGGTCTCTCTTAAATTATATGCATGCCACCCATTCCATTAACAGA--ACAAGGCTAAGGGCTCATCACGCTACCAGCTA-ATTAGC-AGACGACTATA--ACTACATAGGAA-AATGGTAACACCC-------ATA--TCAATTTGGGAATATATTTTGA-AATCTGGTCAAGATCGTTTT-GTTCTATTATG-AATATCAGATAGCAGAT-CAGATTC----TTCCCATGATTTCT-GTA-AAATTATTAAGGGATCTA----TGT-AAGT----AAA-CAATT-ATTG---AT--A
gi|45868 : AAGCTTCTATCAAATTATATGCATGCCAGACATTTCATTATAAGA--ACGAAGCCAGGAGCTCATAACACTACCAACTG-ATGAGC-AGACTAATATA--ACTACATAGGTA-AATGGCTACACAT-------ATA--TCAACAT-AGATAATAATTTGA-GTATTTATCGAGTGTGTTAT-GTTCCATTTAG-AACATCAGATAGCAGAT-CAGATTA----TTTCCTTGATTTTC-ATC-TAATTCTTAAGGAACCTG----Tt
gi|45869 : AGGCCTCTCGCAAATTATATGCATTCGAGACATACTATTATA-GAATGCGAA--TACGAGCTCATAGCACTACCAGCTG-ATCAGC-AGACTTCTATA--AC-ACAC--GAA-AATGGCTACACTT-------TTA--TCGACATGGGATGATATTTT-A-AATCTTGTCAAAAATGTTGT-GTTCCCTTTTA-AAGATC
gi|45870 : AGACCTCTCTCAAATTGTATGCATACCAGAGATACCAATCTCAGA--ACGAGGATA--AGCAGA-CACA---------G-AT--GT-AAACAAC---A--CCT---TAGGAGTAATGGCTACTTCCACTGAAGCTAGCTCATCTTCAAGTAAAA----AAGGATCTAACTTTCATTGTTGT-GTGCCATATTGCAAT-TCAGATTCTAGAT-ATGATGCAACATTAC----ATTTTC-ATC-ACATTCCTAGTGAATCAG--------AA-TTGAAAAA-GAA---ATGGA-TTT-----GTAAAA-TAAGACGGGATGAAGGCCCCCTATT-CAGGGTAA----G--TA----------GT-----T------TCTAT-TAATTA-TAG--ATGAGTTGATATTTAAAGTATAT--TA
gi|45871 : AGACCTCTCTCAAATTGTATGCATGCCTTAGATTCCATAATCAGA--ACGAG
gi|45871 : TGTTTT-GTTTAATTATG-TGTATCTGATGGCAGATACAA-------------TCAGTTTTC-ACA--CATTTCCAAAGGA--TGAAAGTTT-AA-G----AAAACAATATATTG--TAA--AATGTAAAAATCAGAAGAGATGAGGGACCCC-TTTTCAAGGTAA------TTAT---TACTTTGTATTCCTT-CAAGTTTATTCTATTA-TATCTATATAC-----T---AG-TATTTACTATTATTTAT-TGT-TTaccgggtgagcaaacaaacttagcaggatcatggctactggtagaagtagtgcttgagtgttttgtttaattatgtgtatctgatggcagatacaatcagttttcacacatttccaaaggatgaaagtttaagaaaacaatatattgtaaaatgtaaaaatcagaagagatgagggaccccttttcaaggtaattattactttgtattccttcaagtttattctattatatctatatactagtatttactattatttattgttta
gi|45872 : agacctctctcaaattgtatgcatgccttagattccataatcagaacgagaccgggtgagcaaacaaacttagcaggatcatggctactggtagaagtagtgcttgagGGACCCTCTAAAATTATATGCATGCCAGACGTTCCAGTATGTAA--ATGAGGTGAGGAGCTCATAACACTACTAGCGGCACTAGCTACACTACTACA--ACCACAAAGGAT-AATGGCTACACCT-------ATA--TTGACATAGGATCCTATTTTGC-GATCTTGTCAAA--TG--GT-GTTCCCTTT------------CAACAGAT-CATATTT----TCCCCTTG--TTCC-Aa
gi|45873 : GTCTCTCTCAAATTGTATGCATGCCAGACATTTCATTATCAGA--GCGAGGCTAGGAGCTCATCTCACTACCAGCTG-ATTTGC-AGACGACTATATAACTACATAGGAA-AATGGCTAC--CC-------ATA--TCAGCTTGGGATGGTACTTTGA-GATCTGGTCAAGATTGTTTTTGTTCCATTATG-AAT--CAGATAGCAGAT-CAGATTC----TTCCCTTGATTTCC-ATA-AAATTATTAAGGGACCTG----TGTTAG-T----AAA-CAT---ATTG--TAT--AAAGCAAAA-TAAGGAGAGACGGAGGACCAC-ATGGCAATGTTA----A-TTAT---CA---TGT-----T-ACATATCTAT-CTATTA-TTGTTGTGAAA-----TTTAAA-TATCT--AATTGTTTGT-TGT-TTTTTTATTTAA--AATA-AAAT----CAAACTTTAAAAA---CATTTATATTTT-A-TTCG--ATCA-ATGCAAAAACCATAAC--ATGTAACAACACA----TTATG----------TTAT-----ATTTTATTCCT------AGCTAGGAAAGAGAA---------TTTGT----GTTACCG---TATTA----------------------CGCCTTATAAACATAATTTTATTGCCATGTG-AACATA---GTA-----TTATATTC-AACAATT-TATTGGCAATATTTTAGAATATTGAATAATATTTTTATCTTTCATTATA-GGTGGAAATGAACTGTATGAATACGAAGAAA------CAAGCACTGTTAACCAGAAGA
gi|45874 : GCCTCTCTCAAATTATATGCATGCCAGACATTCCATTATCAGA--GCGAGGCTTGGAGCTCATCACACTACCAGCTG-ATTAGC-AGATGACTA---------------A-AATGGCTACACCC-------ATA--TCAACTTAGGATGATATTTTGA-GATCTGGTCAAGATTGTTTT-GTTCCATTATG-AATATCAGATAGCAGAT-CAAATTC----TT--CTTGATTTCC-ATC-AAATTATTAAGGGACCTG----TGTCAG-T----AAA-CAC---ATTA--TAT--AAAGCAAAA-TAAGGAGAGATGGAGGACCAC-ATGGCAATG-----------------------------TTACATATCTAT-CTATTA-TTGTTACGAAT-----TTTAAA-TAGCT--TATTAT--TT-TG---TTTT-ATTCAA--AAT--AATA----CAAACTTTAAAAAT--CATTCATTTTTT-TATGTG--ATCA-ATGCAAAAAACG-------TGTAACAACAAA----TTATG----------TTAT-----ATATTTTTATTTCTAACA---AGGAAAGAGAAATGAAACCATTTGT----GTTACCC---TATTA----------------------CGCCTTATAAACATATTTTTATTGACAT-TGTAACATA---GTA-----TTATATAT-AACAATTCTACTGTCACTATTTTAGAACATTGAATAATATGTG------TCATTATAGGGAGGAAATAGAATGTATGCATA-----AAG------AAGACGCTATACACCA
gi|45875 : GCCTCTCTCAAATTATATGCATTCCAGACATTCCATTATCCAA--GCGAGATTAGGAG
gi|45876 : TATATGCATGCCAACCATTTCATTATCAGA--ACGAGGCGAGGAGC-----ACA-------------TAGC-AGACGGCTATA--ATTTCATAGGGA-AATGGCTACAC-----------A--TCGACATGGGATGCTTTCTCGA-GATCTTTTCAAGAGTG-----GTT-------G-TGTATCAGATAGCAGAT-CAGATTC-----------------C-ATA-ACATTATTAAGGGACCTG----TATTAG-T----AAA-CAATGGAT-A--TATTAAAAGCGAAA-TACGCCGAGATT-AGG--------------GTTA----G-TTAT---CA---TGT-----TTATATATTTTT-CTACTA-TTGTTTTGAAT-----TTTAAA-TATAT--GATTGTTTTT-TG--TTTTT-ATTTGACCAATGCAATAACATCAAATTCT
gi|45876 : TTAGTTATCATG--------TTTATA-TATTT--TTCTACTATT--GT-TTTGA-ATTTTA--AATA-TATG---------------------AT-TGTTTTTT-G-TTTT---TAT-TTG-----ACCAATGC--A-ATAACATCAAA----TTCTG----------TTAT-----ATTTTAATTTCTAAC--A---AGCAAATACAAGTGAAACCATTTGT----GTTACTG---TATTA----------------------CTCATTATAAACATTATTTTATTTGCATGTG-GACATA---GTAGCCTATTACATAC-AACACTT-TATTGTCAGTATTTTAGAATATTAAATAATATTTGCATCTTTCATTATAGGGTGAACATGGACTGTATGAATA-----A-----------------------AGAAG--AAAACCAACCCTGTAAACCAGAAGAgttatattttaatttctaacaagcaaatacaagtgaaaccatttgtgttactgtattactcattataaacattattttatttgcatgtggacatagtagcctattacatacaacactttattgtcagtattttagaatattaaataatatttgcatctttcattatagggtgaacatggactgtatgaataaagaagaaaaccaaccctgtaaaccagaaga
gi|45877 : tatatgcatgccaaccatttcattatcagaacgaggcgaggagcacatagcagacggctataatttcatagggaaatggctacacatcgacatgggatgctttctcgagatcttttcaagagtggttgtgtatcagatagcagatcagattccataacattattaagggacctgtattagtaaacaatggatatattaaaagcgaaatacgccgagattagggTACATGCCAGATATTCCATTATCCAA--GTGCGGTTAGGAGCTCATCACACTACCAGCTG-ATTAGC-AGATGACTATA--ACTATATAGGGA-AATGGCTACACCC-------ATA--TCAACTT----TAGTATTTTGA-GATCTGGTCAAGATTGTTTT-GTTCCATTTTG-AATATCAGATGGCAGAT-TAGATTC----TTCCCTTGATTTCC-ATA-AAATTGTTAAGGGCCCTG----TGTTAG-T----AAA-CAA---CTTG--TAT--AAAGTAAAA-TAAGGCGAGATGGAGGACTAC-ATTGCAATGTAA----A-TTAT---CA---TGT-----TTAAATATCTAT-CTATTA-TTGTTATGAAT-----TTTGAA-TATCT--TA-----G---TGTATTTTT-ATTTAA--AATA-AATA----CAAACTTTAAAAG---CATTTATTTTTT-A-ATTG--ATCA-ATGCAAAAATCATAAC--ATGTAACAA---A----TTATGTGATCTTTTTTTAT-----TT---------------C---TAACAAGA------AAACAGTTTGT----GTTACCG---TATTAATTATAAATTATTATAAATACACACCTTATAAACACAATTTAATTGAGATGTG-AACATA---GTA-----TTATATAT-AACAAGT-TATTGTAAGTATTTTAGAATATTGAATAATATTTGTATCTTTCATTATAGGATGAAAATGGACTGTATGTATA-----AAGAAGAAACCAGAACTGT-AACCAGAAGA
gi|45878 : CAGATTACAAAT-CAGATAT----TTCCCTT-ATTTTCGATACACATC-TTAAGAATTCTT----TGT-AAGT----AAG-CAA-----TGAATAT--AAATCAAAA-AAAGAAGATATGGAGTATCAA-TTTTCAA-GTAATACTGTTTATATATA---TAT-----TGATATATTTAT-ATATTA-TTGTT
gi|45879 : ----G-TTAA---CG---TGT-----TTACATATCTAT-TTATTA-TTGTTATGAAA-----TATAAG-TATCG--TACTGT--TT-TG-----TG-ATTTGA--AATA-AAGA----CAATC-TTAAAAA---CATTTAGTTTGT-A-TTTA--A-ACAATGCA-AAAATATAACATATGTAACAACAAATACTTTTTG----------TTATTTCTAAC---------------A---AGGAAAGGAAAGGGATATAGTTCATTTTAGTTACCGTTTTATTA----------------------CAC---ATAAACATAATTGTATTTACATTTG-A--ATG---ATA-----TTGTTTAA-AAT-ATT-TAT
gi|45880 : TAAAAACTTAATTTT-CAAAT-TATG-AAC-TACCGGTA-----CT-TAAATCAATAATT--A-----GATATTTTAGAATATTGAATACTATTTGTATCTTTCATATTAGGGTGGGAATGGACTGTATGAATA-----AAT------TCAGCACTGTAAACCAGAAGATAAAACCAGCACTGTAAACTAGAAGA