lowQualScore                  :                                                                   777777777777777                           
lowQualScore                  :                                           11111     11111         888888888888888       0        0   0      
lowQualScore                  :                                           .....     .....         ...............       .        .   .      
lowQualScore                  :                                           99999     99999         333333333333333       9        9   3      
consensus                     :                                 TCAGGGATTT-----CATGA-----AATCCCTGA--GAA---ATTT---CAGTAAT-TTCGCGAA-ATCACTGAAA
Reference ( gi|89328 )        :                                 TCAGGGATTT-----CATGA-----AATCCCTGAGTGAA---A------CAGTAAT-TTCGCGAA-ATTACTGAAA
gi|89332                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGAGTGAA---A------CAGTAAT-TTCGCGAA-ATTACTGAAA
gi|89332                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGA
gi|89329                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGAGTGAA---A------CAGTAAT-TTCGCGAA-ATTACTGAAAgtgaaacagtaatttcgcgaaattactgaaa
gi|89329                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGA
gi|89334                      :                                 TCAGGGATTT-----CATGA-----AATCCCTAAGTGAA---A------CAGTAAT-TTTGCGAA-ATTACTGAAAgtgaaacagtaatttcgcgaaattactgaaa
gi|89334                      :                                 TTAGGGATTT-----CATGA-----AATCCCTGA
gi|89337                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGAGTGAA---A------CAGTAAT-TTCGCGAATCTTACTGTAAgtgaaacagtaattttgcgaaattactgaaa
gi|89337                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGA
gi|89343                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGgtgaaacagtaatttcgcgaatcttactgtaa
gi|89342                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGaaatttcagtaatttcgcgaaattactg
gi|89341                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGaaatttcagtaatttcgcgaaattactg
gi|89327                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGA---AA---ATTC---CAGTAAT-TTCGCGAA-ATCCCTGAAAaaatttcagtaatttcgcgaaattactg
gi|89327                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGA
gi|89327                      :                                 TCAGGGATTT-----CGCGA-----AATTACTG---GAATTTT------CAGGGAT-TTCATGAA-ATCCCTGAaaattccagtaatttcgcgaaatccctgaaa
gi|89331                      :                                 TTAGGGATTT-----CATGA-----AATCCCTGA---AA---ATTC---CAGTAAT-TTCGTGAA-ATCACTGAAAaa
gi|89331                      :                                 TCAGGGATTT-----CATGA-----AATCCCTAA
gi|89331                      :                                 TCAGTGATTT-----CACGA-----AATTACTG---GAATTTT------CAGGGAT-TTCATGAA-ATCCCTAAaaattccagtaatttcgtgaaatcactgaaa
gi|89336                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGA---AA---ATTC---CAGTAAT-TTCGTGAA-ATCCCTGAAAaa
gi|89336                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGA
gi|89336                      :                                 TCAGGGATTT-----CACGA-----AATTACTG---GAATTTT------CAGGGAT-TTCATGAA-ATCCCTGAaaattccagtaatttcgtgaaatccctgaaa
gi|89338                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGAGT-AC---ATTTTT-CAGGGAT-TTCACGAA-ATTACTGGAAaa
gi|89338                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGA
gi|89346                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGAGT-AC---ATTTTT-CAGGGAT-TTCACGAA-ATTACTGgtacatttttcagggatttcacgaaattactggaa
gi|89346                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGAa
gi|89347                      : cagtaatttcgtgaaatccctgaaaaatgtacTCAGGGATTT-----CATGA-----AATCCCTGa
gi|89347                      :                                 TCAGGGATTT-----CATGA-----AATTACTG---GAATTTT------CAGGGAT-TTCATGAA-ATCCCTGaaattccagtaatttcatgaaatccctgaaa
gi|89344                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGaa
gi|89344                      :                                 TCAGGGATTT-----CATGA-----AATTACTG---GAATTTT------CAGGGAT-TTCATGAA-ATCCCTGaaattccagtaatttcatgaaatccctgaaa
gi|89333                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGA---AA---ATTC---CAATAAT-TTCATGAA-ATCCCTGAAAaa
gi|89333                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGA
gi|89333                      :                                 TCAGGGATTT-----CATGA-----AATT----ATTGGA---ATTTT--CAGGGAT-TTCATGAA-ATCCCTGAaaattccaataatttcatgaaatccctgaaa
gi|89340                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGACT-AC---ATTTTT-CAGGGAT-TTCACGAA-ATTACTGGAAaa
gi|89340                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGA
gi|89335                      :                                 TCAGGGATTTGATTTCATGA-----AATCCCTGACT-AC---ATTTTT-CAGTGAT-TTCACGAA-ATTACTGGAActacatttttcagggatttcacgaaattactggaa
gi|89335                      :                                 TCAGGGATTT-----CATGAAATCAAATCCCTGA
gi|89345                      :                                 TCAGGGATTT-----CACGA-----AATTACTG---GAA---TTTT---CAGGGAT-TTCACGAA-ATTACTGctacatttttcagtgatttcacgaaattactggaa
gi|89339                      :                                 TCAGGGATTT-----CACGA-----AATTACTG---GAATTTT------CAGGGAT-TTCACGAA-ATTACTGGAAaa
gi|89349                      :                                 TCAGGGATTT-----CACGA-----AATTACTG
gi|89330                      :              atgaaatccctgaaaattcTCAGGGATTT-----CATGA-----AATCCCTGA---AA---ATTC---CAGTAAaa
gi|89330                      :                                 TCAGGGATTT-----CATGA-----AATCCCTGA
gi|89343                      :                                  CAGGGATTT-----CATGA-----AATCCCTGA---AA---ATTT---CAGTAAT-TTCGCGAA-ATTACTGaaattccagtaa
gi|89342                      :                                  CAGGGATTT-----CATGA-----AATCCCTGA---AA---ATTT---CAGTAAT-TTCGCGAA-ATTACTG
gi|89341                      :                                  CAGGGATTT-----CATGA-----AATCCCTGA---AA---ATTT---CAGTAAT-TTCGCGAA-ATTACTG
gi|89338                      :                                  CAGTAATTT-----CGTGA-----AATCCCTGA--AAA---ATGTACTCAGGGAT-TTCATGAA-ATCCCTGA
gi|89346                      :                                  CAGTAATTT-----CGTGA-----AATCCCTGA--AAA---ATGTACTCAGGGAT-TTCATGAA-ATCCCTGAAgaa
gi|89347                      :                                  CAGGGATTT-----CATGA-----AATCCCTGA---AA---ATTC---CAGTAAT-TTCATGAA-ATCCCTGAAA
gi|89344                      :                                  CAGGGATTT-----CATGA-----AATCCCTGA---AA---ATTC---CAGTAAT-TTCATGAA-ATCCCTGAAA
gi|89340                      :                                  CAGTAATTT-----CGTGA-----AATCCCTGA--AAA---ATGTAGTCAGGGAT-TTCATGAA-ATCCCTGA
gi|89335                      :                                  CAGTAATTT-----CGTGA-----AATCACTGA--AAA---ATGTAGTCAGGGAT-TTCATGAA-ATCAgaa
gi|89345                      :                         tcagggattCAGTAATTT-----CGTGA-----AATCCCTGA---AA---ATTC---CAGTAAT-TTCGTGAA-ATCCCTGAAAgaa
gi|89339                      :                                  CAGTAATTT-----CGTGA-----AATCCCTGA---AA---ATTC---CAGTAAT-TTCGTGAA-ATCCCTGA
gi|89349                      :                                  CAGTAATTT-----CGTGA-----AATCCCTGAgaa
gi|89348                      :                   atgaaatccctgaaaattcGATT-------GTGA-----AA-CCCTGA---AA---ATTT---CAGTAAT-TTCGCAAA-ATTACTGaa
gi|89349                      :                                                 ATGA-----AATCCCTGA---AA---ATTC---CAGTAAT-TTCGTGAA-ATCCCTGAAA
gi|89337                      :                                                                        ---A------CAGTAAGATTCGCGAA-ATTACTG
gi|89332                      :                                              tcagggatttcatgaaatccctgagtgaaa------CAGTAAT-TTCGCGAA-ATTACTGaa
gi|89329                      :                                              tcagggatttcatgaaatccctgagtgaaa------CAGTAAT-TTCGCGAA-ATTACTGaaa
gi|89334                      :                                              tcagggatttcatgaaatccctgagtgaaa------CAGTAAT-TTCGCAAA-ATTACTGaaa
gi|89343                      :                                              tcagggatttcatgaaatccctaagtgaaa------CAGTAAT-TTCGCGAA-ATTACTGAAAaaa
gi|89342                      :                                                  cagggatttcatgaaatccctgaaaa------CAGTAAT-TTCGCGAA-ATTACTGAAA
gi|89341                      :                                                  cagggatttcatgaaatccctgaaaa------CAGTAAT-TTCGCGAA-ATTACTGAAA
gi|89331                      :                                                  cagggatttcatgaaatccctgaaaa------CAGTGAT-TTCACGAA-ATTACTGGAA
gi|89335                      :                                                 ttagggatttcatgaaatccctgaaaa------CAGTAAT-TTCGTGAA-ATCACTGAAAaaa
gi|89349                      :                                        tcagggatttgatttcatgaaatccctgactacatt------CAGGGAT-TTCACGAA-ATTACTGGAAgaa
gi|89348                      :                                                            atgaaatccctgaaaa------CAGTAAT-TTTGCGAA-ATTACTGAAAaaa





Alignments
lowQualScore                  :                              4444   1111111                           
lowQualScore                  :           44444              1111   0000000                  22       
lowQualScore                  :           .....              ....   .......                  ..       
lowQualScore                  :           55555              5555   2222222                  55       
consensus                     : TCAGGGATTT-----CATGAAATCCCTGA----AAA--TTC--CAGTAATTTCGCGAAATC--ACTGAAA
Reference ( family-761 )      : TCAGGGATTT-----CATGAAATCCCTGA--G-AAA--TTT--CAGTAATTTCGCGAAATC--ACTGAAA
gi|89327                      : TCAGGGATTT-----CATGAAATCCCTGA----AAA--TTC--CAGTAATTTCGCGAAATC--CCTGAAA
gi|89328                      : TCAGGGATTT-----CATGAAATCCCTGAGTG-AAA-------CAGTAATTTCGCGAAATT--ACTGAAA
gi|89329                      : TCAGGGATTT-----CATGAAATCCCTGAGTG-AAA-------CAGTAATTTCGCGAAATT--ACTGAAA
gi|89330                      : TCAGGGATTT-----CATGAAATCCCTGA----AAA--TTC--CAGTAA
gi|89331                      : TTAGGGATTT-----CATGAAATCCCTGA----AAA--TTC--CAGTAATTTCGTGAAATC--ACTGAAA
gi|89332                      : TCAGGGATTT-----CATGAAATCCCTGAGTG-AAA-------CAGTAATTTCGCGAAATT--ACTGAAA
gi|89333                      : TCAGGGATTT-----CATGAAATCCCTGA----AAA--TTC--CAATAATTTCATGAAATC--CCTGAAA
gi|89334                      : TCAGGGATTT-----CATGAAATCCCTAAGTG-AAA-------CAGTAATTTTGCGAAATT--ACTGAAA
gi|89335                      : TCAGGGATTTGATTTCATGAAATCCCTGA--CTACA--TTTTTCAGTGATTTCACGAAATT--ACTGGAA
gi|89336                      : TCAGGGATTT-----CATGAAATCCCTGA----AAA--TTC--CAGTAATTTCGTGAAATC--CCTGAAA
gi|89337                      : TCAGGGATTT-----CATGAAATCCCTGAGTG-AAA-------CAGTAATTTCGCG-AATCTTACTGTAA
gi|89338                      : TCAGGGATTT-----CATGAAATCCCTGA--GTACATTTTT--CAGGGATTTCACGAAATT--ACTGGAA
gi|89339                      :  CAGTAATTT-----CGTGAAATCCCTGA----AAA--TTC--CAGTAATTTCGTGAAATC--CCTGA
gi|89340                      : TCAGGGATTT-----CATGAAATCCCTGAC-T-ACATTTTT--CAGGGATTTCACGAAATT--ACTGGAAgaa
gi|89341                      :  CAGGGATTT-----CATGAAATCCCTGA----AAA--TTT--CAGTAATTTCGCGAAATT--ACTG
gi|89342                      :  CAGGGATTT-----CATGAAATCCCTGA----AAA--TTT--CAGTAATTTCGCGAAATT--ACTG
gi|89343                      :  CAGGGATTT-----CATGAAATCCCTGA----AAA--TTT--CAGTAATTTCGCGAAATT--ACTG
gi|89344                      :  CAGGGATTT-----CATGAAATCCCTGA----AAA--TTC--CAGTAATTTCATGAAATC--CCTGAAA
gi|89345                      :  CAGTAATTT-----CGTGAAATCCCTGA----AAA--TTC--CAGTAATTTCGTGAAATC--CCTGAAA
gi|89346                      : TCAGGGATTT-----CATGAAATCCCTGA--GTACATTTTT--CAGGGATTTCACGAAATT--ACTG
gi|89347                      :  CAGGGATTT-----CATGAAATCCCTGA----AAA--TTC--CAGTAATTTCATGAAATC--CCTGAAAa
gi|89348                      :      GATT-------GTGAAA-CCCTGA----AAA--TTT--CAGTAATTTCGCAAAATT--ACTG
gi|89349                      :                 ATGAAATCCCTGA----AAA--TTC--CAGTAATTTCGTGAAATC--CCTGAAA





Alignments
lowQualScore                  :                              222   11111                             
lowQualScore                  :          44444               000   33333 1                  22       
lowQualScore                  :          .....               ...   ..... .                  ..       
lowQualScore                  :          55555               000   88888 0                  55       
consensus                     : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGCGAAATC--ACTGAAA
Reference ( family-761 )      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGCGAAATC--ACTGAAA
gi|89327                      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGCGAAATC--CCTGAAA
gi|89328                      : TCAGGGATT-----TCATGAAATCCCTGAGTGAAA-------CAGTAATTTCGCGAAATT--ACTGAAA
gi|89329                      : TCAGGGATT-----TCATGAAATCCCTGAGTGAAA-------CAGTAATTTCGCGAAATT--ACTGAAA
gi|89330                      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAA
gi|89331                      : TTAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--ACTGAAA
gi|89332                      : TCAGGGATT-----TCATGAAATCCCTGAGTGAAA-------CAGTAATTTCGCGAAATT--ACTGAAA
gi|89333                      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAATAATTTCATGAAATC--CCTGAAA
gi|89334                      : TCAGGGATT-----TCATGAAATCCCTAAGTGAAA-------CAGTAATTTTGCGAAATT--ACTGAAA
gi|89335                      : TCAGGGATTTGATTTCATGAAATCCCTGACT-ACATT--TTTCAGTGATTTCACGAAATT--ACTGGAA
gi|89336                      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--CCTGAAA
gi|89337                      : TCAGGGATT-----TCATGAAATCCCTGAGTGAAA-------CAGTAATTTCGCG-AATCTTACTGTAA
gi|89338                      : TCAGGGATT-----TCATGAAATCCCTGA---GTACATTTTTCAGGGATTTCACGAAATT--ACTGGAA
gi|89339                      :  CAGTAATT-----TCGTGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--CCTGA
gi|89340                      : TCAGGGATT-----TCATGAAATCCCTGACT-ACATT--TTTCAGGGATTTCACGAAATT--ACTGGAAgaa
gi|89341                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTTCAGTAATTTCGCGAAATT--ACTG
gi|89342                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTTCAGTAATTTCGCGAAATT--ACTG
gi|89343                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTTCAGTAATTTCGCGAAATT--ACTG
gi|89344                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCATGAAATC--CCTGAAA
gi|89345                      :  CAGTAATT-----TCGTGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--CCTGAAA
gi|89346                      : TCAGGGATT-----TCATGAAATCCCTGA---GTACATTTTTCAGGGATTTCACGAAATT--ACTG
gi|89347                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCATGAAATC--CCTGAAAa
gi|89348                      :      GATT-------GTGAAA-CCCTGA---AAA----TTTCAGTAATTTCGCAAAATT--ACTG
gi|89349                      :                 ATGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--CCTGAAA





Alignments
lowQualScore                  :                              222   11111                             
lowQualScore                  :          44444               000   33333 1                  22       
lowQualScore                  :          .....               ...   ..... .                  ..       
lowQualScore                  :          55555               000   88888 0                  55       
consensus                     : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGCGAAATC--ACTGAAA
Reference ( family-761 )      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGCGAAATC--ACTGAAA
gi|89327                      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGCGAAATC--CCTGAAA
gi|89328                      : TCAGGGATT-----TCATGAAATCCCTGAGTGAAA-------CAGTAATTTCGCGAAATT--ACTGAAA
gi|89329                      : TCAGGGATT-----TCATGAAATCCCTGAGTGAAA-------CAGTAATTTCGCGAAATT--ACTGAAA
gi|89330                      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAA
gi|89331                      : TTAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--ACTGAAA
gi|89332                      : TCAGGGATT-----TCATGAAATCCCTGAGTGAAA-------CAGTAATTTCGCGAAATT--ACTGAAA
gi|89333                      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAATAATTTCATGAAATC--CCTGAAA
gi|89334                      : TCAGGGATT-----TCATGAAATCCCTAAGTGAAA-------CAGTAATTTTGCGAAATT--ACTGAAA
gi|89335                      : TCAGGGATTTGATTTCATGAAATCCCTGACT-ACATT--TTTCAGTGATTTCACGAAATT--ACTGGAA
gi|89336                      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--CCTGAAA
gi|89337                      : TCAGGGATT-----TCATGAAATCCCTGAGTGAAA-------CAGTAATTTCGCG-AATCTTACTGTAA
gi|89338                      : TCAGGGATT-----TCATGAAATCCCTGA---GTACATTTTTCAGGGATTTCACGAAATT--ACTGGAA
gi|89339                      :  CAGTAATT-----TCGTGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--CCTGA
gi|89340                      : TCAGGGATT-----TCATGAAATCCCTGACT-ACATT--TTTCAGGGATTTCACGAAATT--ACTGGAAgaa
gi|89341                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTTCAGTAATTTCGCGAAATT--ACTG
gi|89342                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTTCAGTAATTTCGCGAAATT--ACTG
gi|89343                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTTCAGTAATTTCGCGAAATT--ACTG
gi|89344                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCATGAAATC--CCTGAAA
gi|89345                      :  CAGTAATT-----TCGTGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--CCTGAAA
gi|89346                      : TCAGGGATT-----TCATGAAATCCCTGA---GTACATTTTTCAGGGATTTCACGAAATT--ACTG
gi|89347                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCATGAAATC--CCTGAAAa
gi|89348                      :      GATT-------GTGAAA-CCCTGA---AAA----TTTCAGTAATTTCGCAAAATT--ACTG
gi|89349                      :                 ATGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--CCTGAAA


blockSeqs                     :          TGATT               GTG   CATTT C                  TT
blockSeqs                     :          .                   GTG   CATTT C                  . 
blockSeqs                     :          .                   GTG   TTT   C                  . 
blockSeqs                     :          .                   GTG   TTT   T                  . 
blockSeqs                     :          .                   GTG   T     C                  . 
blockSeqs                     :          .                   CT    T     T                  . 
blockSeqs                     :          .                   CT    T     C                  . 
blockSeqs                     :          .                   .     T     T                  . 
blockSeqs                     :          .                   .     T     T                  . 
blockSeqs                     :          .                   .     T     T                  . 
blockSeqs                     :          .                   .     T     T                  . 
blockSeqs                     :          .                   .     T     C                  . 
blockSeqs                     :          .                   .     T     C                  . 
blockSeqs                     :          .                   .     T     T                  . 
blockSeqs                     :          .                   .     T     C                  . 
blockSeqs                     :          .                   .     T     T                  . 
blockSeqs                     :          .                   .     T     C                  . 
blockSeqs                     :          .                   .     .     .                  . 
blockSeqs                     :          .                   .     .     .                  . 
blockSeqs                     :          .                   .     .     .                  . 
blockSeqs                     :          .                   .     .     .                  . 
blockSeqs                     :                              .     .     .                    


blockSeqCons                  : 
originalCons                  : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGCGAAATC--ACTGAAA
finalCons                     : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGCGAAATC--ACTGAAA





Alignments
lowQualScore                  :                              222   11111                             
lowQualScore                  :          44444               000   33333 1                  22       
lowQualScore                  :          .....               ...   ..... .                  ..       
lowQualScore                  :          55555               000   88888 0                  55       
consensus                     : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGCGAAATC--ACTGAAA
Reference ( family-761 )      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGCGAAATC--ACTGAAA
gi|89327                      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGCGAAATC--CCTGAAA
gi|89328                      : TCAGGGATT-----TCATGAAATCCCTGAGTGAAA-------CAGTAATTTCGCGAAATT--ACTGAAA
gi|89329                      : TCAGGGATT-----TCATGAAATCCCTGAGTGAAA-------CAGTAATTTCGCGAAATT--ACTGAAA
gi|89330                      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAA
gi|89331                      : TTAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--ACTGAAA
gi|89332                      : TCAGGGATT-----TCATGAAATCCCTGAGTGAAA-------CAGTAATTTCGCGAAATT--ACTGAAA
gi|89333                      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAATAATTTCATGAAATC--CCTGAAA
gi|89334                      : TCAGGGATT-----TCATGAAATCCCTAAGTGAAA-------CAGTAATTTTGCGAAATT--ACTGAAA
gi|89335                      : TCAGGGATTTGATTTCATGAAATCCCTGACT-ACATT--TTTCAGTGATTTCACGAAATT--ACTGGAA
gi|89336                      : TCAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--CCTGAAA
gi|89337                      : TCAGGGATT-----TCATGAAATCCCTGAGTGAAA-------CAGTAATTTCGCG-AATCTTACTGTAA
gi|89338                      : TCAGGGATT-----TCATGAAATCCCTGA---GTACATTTTTCAGGGATTTCACGAAATT--ACTGGAA
gi|89339                      :  CAGTAATT-----TCGTGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--CCTGA
gi|89340                      : TCAGGGATT-----TCATGAAATCCCTGACT-ACATT--TTTCAGGGATTTCACGAAATT--ACTGGAAgaa
gi|89341                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTTCAGTAATTTCGCGAAATT--ACTG
gi|89342                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTTCAGTAATTTCGCGAAATT--ACTG
gi|89343                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTTCAGTAATTTCGCGAAATT--ACTG
gi|89344                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCATGAAATC--CCTGAAA
gi|89345                      :  CAGTAATT-----TCGTGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--CCTGAAA
gi|89346                      : TCAGGGATT-----TCATGAAATCCCTGA---GTACATTTTTCAGGGATTTCACGAAATT--ACTG
gi|89347                      :  CAGGGATT-----TCATGAAATCCCTGA---AAA----TTCCAGTAATTTCATGAAATC--CCTGAAAa
gi|89348                      :      GATT-------GTGAAA-CCCTGA---AAA----TTTCAGTAATTTCGCAAAATT--ACTG
gi|89349                      :                 ATGAAATCCCTGA---AAA----TTCCAGTAATTTCGTGAAATC--CCTGAAA