lowQualScore : 111 1 111111 1111 11 11 22222222222222222222222222222222 1111111 11 111111111111111111111 11111 111111 2
lowQualScore : 55 44 55 333 888888 2 0 555 4 2 444 4 66 3333 666666 333 2 2 3 1 77 1111 22 5555 888 1 00 0 333 0 0 999 2 0 22 22 11111111111111111111111111111111 1 22 1 22 1 9999 44 4 3 2 2 1 55 0 3 77 1 66666666 44 555 666 3333333 55 99 8 4444 2 3 0 6 22 1 888 3 555555555555555555555 44444 44 111111 44 3 0 0 5 1
lowQualScore : .. .. .. ... ...... . . ... . . ... . .. .... ...... ... . . . . .. .... .. .... ... . .. . ... . . ... . . .. .. ................................ . .. . .. . .... .. . . . . . .. . . .. . ........ .. ... ... ....... .. .. . .... . . . . .. . ... . ..................... ..... .. ...... .. . . . . .
lowQualScore : 22 22 44 000 888888 2 0 333 1 5 111 1 11 6666 888888 555 0 0 8 9 99 7777 55 9999 000 9 11 7 333 7 1 222 0 1 77 88 55555555555555555555555555555555 8 55 8 55 8 3333 00 7 0 8 3 7 22 6 8 99 9 99999999 44 222 777 9999999 88 11 1 2222 0 6 2 3 22 4 777 7 777777777777777777777 55555 22 777777 66 1 6 6 0 6
consensus : AAAAATGCAATTC-CTTA--TTA-TACTT--ACTTG-GCNGAAT-AAAATAC--TATTTAT---CGATA--CCT--AT--NNGNAA---AT-TA-T-T-TTACAAT---GCTTA--CAT--ACT-N-C-C-ACATTTA---GATTACTGTTGTACAAT--TTGGGGAAA-TTGCAAC-TCTGACCT-ATNTG----A-CA-AN---A-T---AT-T--A--AA-A--TTTCAA-A--A-A-N--G-NGCTGCNAGACTTATCCTCG-ATAAAG--ACAT-T--GATACA-C--------C-NT---C---TG-A--AGCATTATTTAATGAN-CTNAAA----TGGA-TGACGTTCCCTGAAAGAGTTAAATAT--NAAAAAGC--TA---------TT--T-TAATGT-TCA-AAAT--CA-TC--AACAAC--TTGGCCCCGGAGTATTTGCAAAATAAATTTT
Reference ( gi|132520 ) : AAAAATGCAATTC-CTTA--TTA-TACTT--ACTTG-GCCGAAT-AAAATAC--TATTTAT---CAATA--CCT--AT--TAGGAA---AT-TA-T-T-TTACAAT---TCTTA--CAT--ACT-T-C-C-TCATCTA---GACTATTGCTGTACAAT--ATGGGGAAA-TTGCAAC-TCTGACCT-ATCTG----A-CA-AC---A-T---AT-T--A--AA-A--TTTCAA-A--A-A-C--G-TGCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------C-AT---C---TG-A--AACATTATTTAATGAT-CTAAAA----TGGA-TGAAATTCCATGAAAGAGTAGAATAT--AAAAAGGC--TA---------TT--T-TAATGT-TCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
gi|132521 : AAAAATGCAATTC-CTTA--TTA-TACTT--ACTTG-GCAGAAT-ATAATAC--TATTTAT---CAATA--CCT--AT--TAGGAA---AT-TA-T-T-TTACAAT---TCTTA--CAT--ACT-T-C-C-TCATCTA---GACTATTGCTGTACAAT--ATGGGGAAA-TTGCAAC-TCTGACCT-ATCTG----A-CA-AC---A-T---AT-T--A--AA-A--TTTCAA-A--A-A-T--G-TGCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------C-AT---C---TG-A--AACATTATTTAATAAT-CTAAAA----TGGA-TGAAATTCCATGAAAGAGTAGAGTAC--AAAAAGGC--TA---------TT--T-TAATGT-TCA-AGAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
gi|132522 : AAAAATGCAATTC-CTTA--TTA-TACTT--ACTTG-GCAGAAC-AAAATAC--TATTTAT---CAATA--CCC--AT--TTGGAA---AT-TA-T-T-TTACAAT---TCTTA--CAT--ACT-T-C-C-TCATCTA---GACTATTGCTGTACAAT--ATGGGGAAA-TTGCAAC-TCTGACCT-ATCTG----A-CA-AC---G-T---AT-T--T--AA-A--TTTCAA-A--A-A-C--G-TGCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------C-AT---C---TG-A--AACATTATTTAATGAT-CTAAAA----TGGA-TAAAATTCCATGAAAGAGTAGAATAT--AAAAAGGC--TA---------TT--T-TAATGT-TCA-AGAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
gi|132523 : AAAAATGCAATTC-CTTA--T----ACTT--ACTTG-GCAGCAT-AAAATAC--TATTTAT---CAATA--CCT--AT--GAGGAA---TT-TA-T-T-T-ACAAT---TCTTA--CAT--ACT-T-C-C-TCATCTA---GACTATTGCTGTACAAT--ATGGGGAAA-TTGCAAC-TCTGACCT-ATCCG----G-CA-AA---A-T---AT-T--G--AA-A--TTTCAA-A--A-A-C--G-TGCTGCAAGACT-ATCCTTG-A-AAAG--ACAT-T--GATACA-C--------C-AT---C---TG-A--ATCATTATTTAATGAT-CTAAAA----TAGA-TGAAATTCCATATAAGAGTAGAATAT--AAAAAGGC--TA---------TT--T-TAATGT-TCA-ACAT--CA-TC--AACAAC--TTGGCCCCAGAGTTTTTGCAAAAT-AATTTT
gi|132524 : AAAAATGCAATTC-CTTA--TTA-TACTT--ACTTG-GCCGAAT-AAAATAC--TATTTAT---C--------------------A---AT-TA-T-T-TTACAAT---TCTTA--CAT--ACT-T-C-C-TCATCTA---GACTATAGCTGTACAAT--ATGGGGAAA-TTGCAAC-TCTGACCT-ATCTG----A-CA-AC---A-T---AC-T--A--AA-A--TTTCAA-A--A-A-T--G-TGCTGCAAGACTTGTCCTTG-ATAAAG--ACAT-T--GATACA-C--------C-GT---C---TG-A--AACATTATTTAATGAT-CTAAAA----TGGA-TGA
gi|132525 : AAAAATGCAATTC-CTAA--TTA-TACTT--ACTTG-GCAGAAT-AAAATAC--TATTTAT---CAATA--CCT--AT--TAGGAA---AT-AA-C-T-TTATAAT---TCTTA--CAA--ACT-T-C-C-TCATCTA---GACTATTGCTGTACAAT--ATGGGGAAA-TTGCAAC-TCTGACCT-ATCCG----A-CA-AC---A-T---AT-T--G--AA-A--TTTCAA-A--A-A-T--G-TGCTGCAAAATTTATCCTTG-ATAAAG--ACAT-C--AGTACA-C--------C-AT---C---TG-A--
gi|132526 : AAAAATGTAATTC-TCTG--TTA-TACTT---TTTATATCGCAT-TAAAAAC--T--TCAT---TGACATCCCT--AC--ACGCAA---AC-TC-T-T-TTTTAAT---GCATA--TAT--TCT-G-C-C-ACATTTA---GATTATTGTTGTACCAT--TTGGGGCAA-CTGCAAT-TCAGAACT--TTTG----AACA-AT---C-T---CC-T--A--AA-A--TTCCAA-A--A-A-C--G-TGCAGCGAGAATAATACTCA-ACAAGG--ACTT-T--GAT-TATC--------C-AT---C---TG-C--AGAATTATTTGATCAA-CTTGGC----TGAA-TGACATTCCAGGAAAGATTCCAATAT--AAAAAGGC--TA---------CT--C-TTGTTT-TC--AAAT--C--TCTGAACAAT--CTGGCACCAGCTTATCTCCAGAACAAGTT
gi|132527 : AAAAATGTAATTC-TCTG--TTA-TACCT---TTTATATCGCAT-TAAATAC--T--TCAT---TGACATCCCT--AC--ACGCAA---GC-TC-T-G-TTTTAAT---GCATA--TAT--ACT-G-C-C-ACATTTA---TATTATTGTTGTACAAT--TTGGGGCAA-CTGCAAT-TCAGAACT--TTTG----AACA-AT---C-T---CC-T--T--AA-A--TTACAA-A--A-AAC--G-TGCAGCGAGAATAATTCTCA-ACAAGG--ACTT-T--GA-ATA-T--------CTAT---C---TA-C--AGAATTATTTGATCAA-CTTGGC----TGGA-TGACATTCCAGGAAAAAATCCAATAT--AAAAAGGC--TA---------CT--C-T--TGT-TTACAAAT--C--TCTGAACAAT--CTGGCACCAGCTTATCTCTAGAACAAGTTT
gi|132529 : AGAAATGTAATTC-ATTA--CTT-TATCT--TCTAT-CTCGCATCAAAATAT--T-TTT-T---CTGTA--CTA--AT--GCGTAA---GT-TG-T-T-TTTTAAT---GCTTA--CAT--TTT-A-C-C-ACATTTA---GATTACTGTTATGTAAT--TTAGGGAAA-TTGTAA----TAATTC-ACGTGT---A-GATAC---A-----AT-T--GCTAG-G--TTTTAA-A--A-G-A--G-AGCTGCTAGACTAATTCTCG-ATAAAAATACAA-T--AATCCT-T--------C-TA---C---TG-A-----ATTA-TTACAGAG-CTTAAA----TGGA-TGTCGTTTCCTGAAAGAGTTAAATTT--CAAAAAACAGTA---------TT--T-
gi|132528 : AAAAGTGCAATCCACTCA--CTGCTGTTTTAAATAA-ACAGAAT-TAAACCA--TATTTAT---CAATT--AAT--GT--GCGTAA---AT-TAAT-T-TTAT--T---GCTTA--CGT---CT-TGC-C-ACATCTG---GACTCCTGTTTT-TAAC--ATGAGGAAT-TTGTTCT-TCTGATCTCATG-G----A-TT-CT---A-T---AG-T--C--AG-A--TTCCAA-A--A-G-A--G-ATCTGCTTGAATTATGTTTGGACAAAG--ATTA-T--GACACA-C--------C-GT---T---CA-A--TGAATTATTTTACGAA-TTTAAA----TTGA-TGGAATTCCCTGATAGAGTTAAATAT--CAAAAAGC--
gi|132530 : AGAAATGTTATTC-ATTA--CTT-TATCT--TCTAT-CTCGCATCAAAGTAT--TTCTT-T---CTGTA--CCA--AT--GCGTAA---GT-TG-T-T-TTTTA-T---GCTTA--CAT--TTT-A-C-C-ACATTTA---GATTACTGTTGTGTAATTCATAG--AAA-TTGTAATATTTCACTT-GTA-G----A-TA-AA---A-TT--GT-T--A--GG----TTTCAA-A--A-G-A--G-AGCTGCTAGACTTATTATCG-ATTA----ACAT-TACGATACT-C--------C-TT---C---TA-ATGAA---TATTCACAGAG-CTGAAA----TGGA-TGACGTTTCCTGAAAGAGTTAAATTT--CTAAAAGCAGTA---------CT--TATAA
gi|132531 : AGAAATGTAATTC-ATTA--CTT-TATCT--TCTAT-CTCGCATCAAAATAT--T-TTT-T---CTGTA--CTA--AT--GCGTAA---GT-TG-T-T-TTTTAAT---GCTTA--CAT--TTT-A-C-C-ACATTTA---GATTACTGTTATGTAAT--TTAGGTAAA-TTGTAA----TAATTC-ACGTGT---A-GATAC---A-----AT-T--GCTAG-G--TTTTAA-A--A-G-A--G-AGCTGCTAGACTAATTCTCG-ATAAAAATACAA-T--AATCCT-T--------C-TA---C---TG-A--A----TAATCACAGAG-CTTAAA----TGGA-TGTCGTTTCCTGAAAGAGTTAAATTT--CAAAAAGC--
gi|132532 : AAAGTGCATTTT-ATTA--TTG-TATAT--ACTAG-GCAGAAT-AAAATAG--TATCTAT---CAATA--CAT--GT--TATG-----AT-TA-TATGTTACAAT---ATTTA---AT--A
gi|132533 : AAATGTAATTC-ATTACTTTG-T-CTTCTACCTA-GC---ATCAAAGTAT--AACTT-T---CTGTA--CCA--AT--GCGTAA---GT-TG-T-T-TTA--AT---GCTTA--CATTTAAT-T-C-C---ATTTA---GATAACTGTTGTGTTAT--TTGGGGAAA-TTGTAATGTTTCACTT-GTA-G----A-TA-AA---ATT---GT-T-----AG-G--TTTC-A-A--A-A-CGAG-AGCTGTTAGACTTAATCTCG-ATAAAA--A-ATAC--GACACT-C--------C-TT---C---CA-C--AGAATTATTCACAGAG-TTAAAA----T-GA-TAACGTTTTCTGAAAAAGTTAAATTTC-AAAAAAGCAGTA---------CT--T---ATGT-ATA-AAtagacatttaaaaaaaggtgcttctagacgtattctttatagatgcattgattcacaatttggatcattatttaatagtactaaatggttgaaattcatgaacgggtagaatataaaaaaaagttaatctaatgtaaaatagcattaacatattattagtatttgctacataacttt
gi|132536 : GAAT-TAAATCA--TATTTAT---CGATT--CAT--GT--AAGCAA---AT-TA-T-A-TGTTAAT---GGTTA--CGT--TTT-G-T-C-ACAATTG---GATTATTGTTGTTCAAT--TTGGGGAAA-TTATTCC-TTTGATCT-ATA-G----T-CA-A----------AC-T--A--AA-A-----AAA-A--A-A-T--C-TGCTACAA---TTAT-------TA----------T--GACACA-C--------C-GT---CCATTG----AACA--ATTTTCCGAA-ATGAAA----TGGAGTGAATTTCC-TGATAAAGTTGAATAT--CAACAAGC--AA---------TA--A-TAATGT-ACA-AAAccat
gi|132534 : GAAT-ATCATAT--TATTTA--------A--CAT--ATGATATGAATGTAT-TG-T-T-TTACAAT---GCCTA--CAT--AATGT-C-A-ACATTT----GATTATTGTTGTATTGT--TTTGGGAAA-AGGTAA------ACAT-ATACAAAATA-CA-AT---A-T---AT-------AA-A--TCTCAG-A--A-A-A--G-AGCAGCAAGAATAATACTAA-ATAA
gi|132537 : cttcttaaaaAT-AAAATA---TATTTATAAGCAATT--CAT---T--CATAAA---AT-TA-TAT-TTA-AAT---GCTTA--CAT--TTT-G-C-C-ACATTTG---GACTATTGCTATACAAT--
gi|132535 : AATACAACATTTA----AAACA--ACTGCAT--TA--AA---ATGTA-T------CAATATATCCTAAGCAT--G-T-A-C-C-TAATCTA---GATTATTGCTGCACAAT--A-GGGGTAA------AC-TCTGACCT-ATCTG----A-CA-AC---A-TG--AT----------A--TTTCAA-A--A-G-C--G-TGCTGCCAGATTTATCTTTG-ATATAG--ACAG-T--GATGCA-C--------C-AG---C---TT-A--AACAATATTTAATGAT-CGTAAA----CGGA-CGCAATTCCATGAAAGAGTAGACAAT--AAAAA-AC--TA---------TT--G-GAATGT--------------TC--AACAGC--TTGGCCCTGGAGTATTTGCAAAAT-AATTTTttatatctgctacaattatcttatagaaaaatgttaccacaccatcctgtaaacttatatctgaattgagatggatggaatttcttggtggggttaaatgttaagaagcaattctaatgtttaaaataatacgttgatcttcaccagcttatctccgagggtcattt
gi|132538 : gcaaaacaacttttTA--CCA--AT--GCGTAA---GT-TG-T-T-TTTTAAT---GCTTA--CAT--TTT-A-C-C-ACATTTA---TATTACTGTTGTGTTAT--TTGGGGAAA-TTGTAATATTTCACTT-GTA-G----A-TA-AA---ATT---GT-T-----AG-G--TTTCAA-A--A-G-A--G-AGCTGCTAGACTTATTCTCG-ATAAAA----AT-TACGATACT-C--------C-TTCTAC---TG-A-----ATTATTCACAGAG-CTTAAA----TGGA-TGACGTTTCCTGAAAGAGTTAAATTT--CAAAAAGCAGTA---------CT--T-ATATAT-----AAGT--CATTT--AATGAC--CAGGCTCCTGCATATCT-CAAA
gi|132539 : AGGAA---AT-TA-T-T-TTACAGT---GGTTA--TAT--ACT-T-C-CATTATTTAATTAATTACTGTTGCACAGT--TTGGAATAA-CTGCGCT-TAAGATGG-ATTTA----ATCG-A----A-T---AC-T--A--AA-A--TTACAG-A--A-A-A--G-AGCAGCAAGAATTATCCTTA-AT
gi|132540 : AA---AT--A-T-T-TT-TAAC---ACACA--CAT--ACT-G-C-C-ACATTTA---GATTATTGTTGCATCAT--TTTGGGTAA-CTATAAT-TCAG-----ATTTC----A-AA-AA---A-T---CT-TCAA--AA-A--TTTCAATAATA-A-C--G-TGCAGCAAGAATAAAACTGA-ACAAGG--ACTT-G--GAT-TA-CTGGGTATTC-AT---C---TG-C--AGAATTATTTGA------TAAAATGGCTGGG-TGACATTCAAAGAAAGAATCCATTAT--AAAACTGC--TAGCGGTATACTC--T-T-GTTT-TC--AAAT--CT-TTG-AACAAT--CTGGCACCGG
gi|132541 : -T-TTA-AAT---GCTTA--CG----CT-T-TGC-ACATTTG---GACTCCTTTTGTTCAAT--TTGGGTAAG-TTGTTCC-TCTGATCT---CAG----G--A-ATTCTA-T---AG-T--C--AA-A--CTTCGA-A--AGA-T--A-T-CTGCTAGA-TTAACCTGG-ACAAAG--ATAA-T--GACACA-T--------C-GT---CAATTG-A--ACTATTTTCCAA--AT--TGAAA----TGGA-TGGATTCTCCTGATAGAGTTACATAT--CAAAATGG--AA---------TA--C-TAATG--TCA-AAAT--AA-TC--AA
gi|132542 : CTTA--CAT--ATT-A-C-T-TCATTTA---GATAACGGTTGTGTTAC--TTGGGGGAAGTTGTAATGTTTCACTT-GTA-G----A-TA-AA---A-T---TG-T--A--AG-A--TTTCAA-A--A-G-A--G-AGCTGCTAGACTTTTTCTCA-ATAAAA--AAATAC--GGTATT-C--------C-TT---C---TA-C--ATAATTATTCATTAAG-CTTAAA----CTGA-TGACGTTTCCTGAAAGGGTTAAATTT--CTAAAGGCAGTA---------CTCAT-GTATAT-TTA-AGAG--CA---------------GGCCCCTGCATATTT-CAAA
gi|132532 : T-ATGTT----A-CA-AT---A-TTTAATAT--A--GACA--TTTAAA-A--A-A-A--GGTGCTTCTAGACGTATTCTTT-ATAGAT--GCAT-T--GATTCA-C--------A-AT---T---TG-G--ATCATTATTTAATAGTACT-AAA----TGGT-TGAAATT-CATGAACGGGTAGAATATAAAAAAAAGT--TA---------AT--C-TAATGT---A-AAATAGCA-TT--AACATA--TTATT-----AGTATTTGCTACATAACTTT
gi|132543 : aaagtgcattttattattgtatatactaggcagaataaaatagtatctatcaatacatgttatgatta---AT-T--C--AA-AGGTTTCAA-G--A-G-A--A-AGCTGCTAGATTTATTCTCG-ATAAAA--A--T-TACGATACT-C--------C-TT---C---TA-C--AGAATTATTCACTAAG-TTTAAA----TGGC-TGACGTTTTCTGAAAGAGTTAAATTT--CAAAAAGC--AG---------TA--C-TCATGTAT---AAAT--CATTT--AATGACCATTGGCTCC
gi|132537 : -TGCTACAA---TTATCTTAT-AGAAAA--ATGT-T--ACCACA-C--------C-ATC--C---TGTA--AAC-TTATAT-CTGAA-TTGAGA----TGGA-TGGAATTTCTTGGTGGGGTTAAATGT--TAAGAAGC--AA---------TT--C-TAATGT-TTA-AAAT--AA-T
gi|132544 : ataaaatatatttataagcaattcattcataaaattatatttaaatgcttacattttgccacatttggactattgctatacaatttatatcC--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTTacgttgatcttcaccagcttatctccgagggtcattt
Alignments
lowQualScore : 11 11 1 11 22222222 1111111111 1111 1111 11 1
lowQualScore : 44 55 2 6 444 88 2 0 4 9 2 4 2 444 9 66 666666 33 1 2 1 66 22 1 1 1 22 1 333 0 1 11 66666 00000000 555 4444444444 1 22 1 1 22 1 1 33 1 2 2 1 1 22 0 3 77 3 66666666 1 888 22 88 33 1 1 1 55 2 2 0 555 4444 8888 555555 1111 33 77 00 44 2 5 3 8
lowQualScore : .. .. . . ... .. . . . . . . . ... . .. ...... .. . . . .. .. . . . .. . ... . . .. ..... ........ ... .......... . .. . . .. . . .. . . . . . .. . . .. . ........ . ... .. .. .. . . . .. . . . ... .... .... ...... .... .. .. .. .. . . . .
lowQualScore : 11 77 9 1 777 33 7 9 0 4 1 1 5 111 3 11 111111 66 7 0 9 88 55 5 0 8 22 7 000 5 9 66 44444 77777777 999 3333333333 7 44 7 7 44 7 0 33 0 4 2 9 7 55 9 6 55 6 66666666 0 222 22 00 55 0 0 9 44 0 0 9 888 2222 0000 999999 9999 99 33 77 22 1 6 6 2
consensus : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAAT-AAAATACTATTTAT---CGATA--C---C-TATGCGNAAATTA-T-TTTACAATGCTTACA--TACTNC-C-AC-ATTTAG---ATTATTGTTGTACAATTTGGGGAAA-TTGCAAC-TCTGACCT-----ATNTG-----ACAANA-T---AT-T--AAA-A--TTTC-AA-A--A-GNGN-GCTGCNAGACTTATCCTCG-ATAAAG--ACAT-T--GATACA-C--------CNTC---TG-AAGNATTATTTAATGANCTNAAATGGA-TGACGTTC-CCTGAAAGAGTTAAATAT--NAAAA----AGC----TATT--C-TAATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
Reference ( family-728 ) : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCNGAAT-AAAATACTATTTAT---CGATA--C---C-TATNNGNAAATTA-T-TTTACAATGCTTACA--TACTNC-C-AC-ATTTAG---ATTACTGTTGTACAATTTGGGGAAA-TTGCAAC-TCTGACCT-----ATNTG-----ACAANA-T---AT-T--AAA-A--TTTC-AA-A--A-ANGN-GCTGCNAGACTTATCCTCG-ATAAAG--ACAT-T--GATACA-C--------CNTC---TG-AAGCATTATTTAATGANCTNAAATGGA-TGACGTTC-CCTGAAAGAGTTAAATAT--NAAAA----AGC----TATT--T-TAATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCGGAGTATTTGCAAAATAAATTTT
gi|132520 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCCGAAT-AAAATACTATTTAT---CAATA--C---C-TATTAGGAAATTA-T-TTTACAATTCTTACA--TACTTC-C-TC-ATCTAG---ACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AT-T--AAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TG-AAACATTATTTAATGATCTAAAATGGA-TGAAATTC-CATGAAAGAGTAGAATAT--AAAAA----GGC----TATT--T-TAATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
gi|132521 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAAT-ATAATACTATTTAT---CAATA--C---C-TATTAGGAAATTA-T-TTTACAATTCTTACA--TACTTC-C-TC-ATCTAG---ACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AT-T--AAA-A--TTTC-AA-A--A-ATGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TG-AAACATTATTTAATAATCTAAAATGGA-TGAAATTC-CATGAAAGAGTAGAGTAC--AAAAA----GGC----TATT--T-TAATGTTCA-AGAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
gi|132522 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAAC-AAAATACTATTTAT---CAATA--C---C-CATTTGGAAATTA-T-TTTACAATTCTTACA--TACTTC-C-TC-ATCTAG---ACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACG-T---AT-T--TAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TG-AAACATTATTTAATGATCTAAAATGGA-TAAAATTC-CATGAAAGAGTAGAATAT--AAAAA----GGC----TATT--T-TAATGTTCA-AGAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
gi|132523 : AAAAATGCAATTC-CTTA--T----AC---TT--ACT-TGGCAGCAT-AAAATACTATTTAT---CAATA--C---C-TATGAGGAATTTA-T-TT-ACAATTCTTACA--TACTTC-C-TC-ATCTAG---ACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCCG-----GCAAAA-T---AT-T--GAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACT-ATCCTTG-A-AAAG--ACAT-T--GATACA-C--------CATC---TG-AATCATTATTTAATGATCTAAAATAGA-TGAAATTC-CATATAAGAGTAGAATAT--AAAAA----GGC----TATT--T-TAATGTTCA-ACAT--CA-TC--AACAAC--TTGGCCCCAGAGTTTTTGCAAAAT-AATTTT
gi|132524 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCCGAAT-AAAATACTATTTAT---C--------------------AATTA-T-TTTACAATTCTTACA--TACTTC-C-TC-ATCTAG---ACTATAGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AC-T--AAA-A--TTTC-AA-A--A-ATGT-GCTGCAAGACTTGTCCTTG-ATAAAG--ACAT-T--GATACA-C--------CGTC---TG-AAACATTATTTAATGATCTAAAATGGA-TGA
gi|132525 : AAAAATGCAATTC-CTAA--TTA-TAC---TT--ACT-TGGCAGAAT-AAAATACTATTTAT---CAATA--C---C-TATTAGGAAATAA-C-TTTATAATTCTTACA--AACTTC-C-TC-ATCTAG---ACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCCG-----ACAACA-T---AT-T--GAA-A--TTTC-AA-A--A-ATGT-GCTGCAAAATTTATCCTTG-ATAAAG--ACAT-C--AGTACA-C--------CATC---TG-A
gi|132526 : AAAAATGTAATTC-TCTG--TTA-TAC---TT--TTTATATCGCATT-AAAA-ACT--TCAT---TGACATCC---C-TACACGCAAACTC-T-TTTTTAATGCATATA--TTCTGC-C-AC-ATTTAG---ATTATTGTTGTACCATTTGGGGCAA-CTGCAAT-TCAGAACT------TTTGA----ACAATC-T---CC-T--AAA-A--TTCC-AA-A--A-ACGT-GCAGCGAGAATAATACTCA-ACAAGG--ACTT-T--GAT-TATC--------CATC---TG-CAGAATTATTTGATCAACTTGGCTGAA-TGACATTC-CAGGAAAGATTCCAATAT--AAAAA----GGC----TACT--C-TTGTTTTC--AAAT--C--TCTGAACAAT--CTGGCACCAGCTTATCTCCAGAACAAGTT
gi|132527 : AAAAATGTAATTC-TCTG--TTA-TACCTTTT--ATA-TCGC---AT-TAAATACT--TCAT---TGACATCC---C-TACACGCAAGCTC-T-GTTTTAATGCATATA--TACTGC-C-AC-ATTTAT---ATTATTGTTGTACAATTTGGGGCAA-CTGCAAT-TCAGAACT------TTTGA----ACAATC-T---CC-T--TAA-A--TTACAAA-A--A-ACGT-GCAGCGAGAATAATTCTCA-ACAAGG--ACTT-T--GA-ATATC--------TATC---TA-CAGAATTATTTGATCAACTTGGCTGGA-TGACATTC-CAGGAAAAAATCCAATAT--AAAAA----GGC----TACT--C-T--TGTTTACAAAT--C--TCTGAACAAT--CTGGCACCAGCTTATCTCTAGAACAAGTTT
gi|132528 : AAAAGTGCAATCCACTCA--CTGCTGT---TTTAAAT-AAACAGAAT-TAAACCATATTTAT---CAATT--A---A-TGTGCGTAAATTAAT-TTTAT--TGCTTACG--TCTTGC-C-AC-ATCTGG---ACTCCTGTTTT-TAACATGAGGAAT-TTGTTCT-TCTGATCTC----ATG-G-----ATTCTA-T---AG-T--CAG-A--TTCC-AA-A--A-GAGA-TCTGCTTGAATTATGTTTGGACAAAG--ATTA-T--GACACA-C--------CGTT---CA-ATGAATTATTTTACGAATTTAAATTGA-TGGAATTC-CCTGATAGAGTTAAATAT--CAAAA----AGC----
gi|132529 : AGAAATGTAATTC-ATTACTTTA-T-C---TTCTATC-TCGC---ATCAAAATATT-TTT-T---CTGTA--C---T-AATGCGTAAGTTG-T-TTTTTAATGCTTACA--TTTTAC-C-AC-ATTTAG---ATTACTGTTATGTAATTTAGGGAAA-TTGTAA----TAATTC-----ACGTGTAGATACAAT--T---GC-T---AG-G--TTTT-AA-A--A-GAGA-GCTGCTAGACTAATTCTCG-ATAAAA--ATA--C--AATAAT-C--------CTTC---TA-CTGAATTA-TTACAGAGCTTAAATGGA-TGTCGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AACAG--TATT--T-
gi|132530 : AGAAATGTTATTC-ATTACTTTA-T-C---TTCTATC-TCGC---ATCAAAGTATTTCTT-T---CTGTA--C---C-AATGCGTAAGTTG-T-TTTTTA-TGCTTACA--TTTTAC-C-AC-ATTTAG---ATTACTGTTGTGTAATTCATAGAAA-TTGTAATATTTCACTT-----GTA-G-----ATAAAATT---GT-T---AG-G--TTTC-AA-A--A-GAGA-GCTGCTAGACTTATTATCG-ATTA----ACAT-TACGATACT-C--------CTTC---TA-ATGAA-TATTCACAGAGCTGAAATGGA-TGACGTTT-CCTGAAAGAGTTAAATTT--CTAAA----AGCAG--TACT--TATAA
gi|132531 : AGAAATGTAATTC-ATTACTTTA-T-C---TTCTATC-TCGC---ATCAAAATATT-TTT-T---CTGTA--C---T-AATGCGTAAGTTG-T-TTTTTAATGCTTACA--TTTTAC-C-AC-ATTTAG---ATTACTGTTATGTAATTTAGGTAAA-TTGTAA----TAATTC-----ACGTGTAGATACAAT--T---GC-T---AG-G--TTTT-AA-A--A-GAGA-GCTGCTAGACTAATTCTCG-ATAAAAATACAA-T--AATCCT-T--------CTAC---TG-AA----TAATCACAGAGCTTAAATGGA-TGTCGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AGC----
gi|132532 : AAAGTGCATTTT-ATTA--TTG-TAT---AT--ACT-AGGCAGAAT-AAAATAGTATCTAT---CAATA--CATGT-TATGATTA---TA-T-GTTACAATATTTA-A--TATAG----AC-ATTTAA---A
gi|132532 : T-----ATGTT-----ACAATA-TTTAATAT--AGACA--TTTA-AA-A--A-AAGGTGCTTCTAGACGTATTCTTT-ATAGAT--GCAT-T--GATTCA-C--------AATT---TG-GATCATTATTTAATAGTACTAAATGGT-TGAAATT--CATGAACGGGTAGAATATAAAAAAA----AGT----TAAT--C-TAATGT--A-AAATAGCA-TT--AACATA--TTATT-----AGTATTTGCTACATAACTTTaaaaggtgcttctagacgtattctttatagatgcattgattcacaatttggatcattatttaatagtactaaatggttgaaattcatgaacgggtagaatataaaaaaaagttaatctaatgtaaaatagcattaacatattattagtatttgctacataacttt
gi|132533 : aaagtgcattttattattgtatatactaggcagaataaaatagtatctatcaatacatgttatgattaAAATGTAATTC-ATTACTTTG-T-C---TTCTACC-TAGC---ATCAAAGTATAACTT-T---CTGTA--C---C-AATGCGTAAGTTG-T-TTTA--ATGCTTACATTTAATTC----C-ATTTAG---ATAACTGTTGTGTTATTTGGGGAAA-TTGTAATGTTTCACTT-----GTA-G-----ATAAAATT---GT-T---AG-G--TTTC-AA-A--ACGAGA-GCTGTTAGACTTAATCTCG-ATAAAA--A-ATAC--GACACT-C--------CTTC---CA-CAGAATTATTCACAGAGTTAAAAT-GA-TAACGTTT-TCTGAAAAAGTTAAATTTC-AAAAA----AGCAG--TACT--T---ATGTATA-AA
gi|132534 : C---TT---CT-TAAAAGAAT-ATCATATTATTTAA---C-ATA--T---GATATGAATGTATTG-T-TTTACAATGCCTACA--TAATGT-CAAC-ATTT-G---ATTATTGTTGTATTGTTTTGGGAAA-AGGTAA------ACAT-----ATACAAAAT-ACAATA-T---AT-----AA-A--TCTC-AG-A--A-AAGA-GCAGCAAGAATAATACTAA-ATAAccat
gi|132535 : -ATCTAG---ATTATTGCTGCACAATA-GGGGTAA------AC-TCTGACCT-----ATCTG-----ACAACA-TG--AT--------A--TTTC-AA-A--A-GCGT-GCTGCCAGATTTATCTTTG-ATATAG--ACAG-T--GATGCA-C--------CAGC---TT-AAACAATATTTAATGATCGTAAACGGA-CGCAATTC-CATGAAAGAG-TAGACAA--TAAAA----AAC----TATT--G-GAATGT-------------TC--AACAGC--TTGGCCCTGGAGTATTTGCAAAAT-AATTTT
gi|132536 : gcaaaacaacttttaatacaacatttaaaacaactgcattaaaatgtatcaatatatcctaagcatgtacctaGAAT-TAAATCATATTTAT---CGATT--C---A-TGTAAGCAAATTA-T-ATGTTAATGGTTACG--TTTTGT-C-AC-AATTGG---ATTATTGTTGTTCAATTTGGGGAAA-TTATTCC-TTTGATCT-----ATA-G-----TCAAAC-T---A-----AAA-A-------AA-A--A-AT----CTGCTACAATTAT-------TA----------T--GACACA-C--------CGTCCATTG-AA-CA--ATTTTCCGAAATGAAATGGAGTGA-ATTT-CCTGATAAAGTTGAATAT--CAACA----AGC----AATA--A-TAATGTACA-AAA
gi|132537 : AT-AAAATA-TATTTATAAGCAATT--C---A-T-TCATAAAATTA-TATTTA-AATGCTTACA--TTTTGC-C-AC-ATTTGG---ACTATTGCTATACAATTT
gi|132537 : CTGCTACAATTATCTTAT-AGAAAA--ATGT-T--ACCACA-C--------CATCC--TGTAAAC-TTATATC-TGAATTGAGATGGA-TGGAATTT-CTTGGTGGGGTTAAATGT--TAAGA----AGC----AATT--C-TAATGTTTA-AAAT--AA-Tatatctgctacaattatcttatagaaaaatgttaccacaccatcctgtaaacttatatctgaattgagatggatggaatttcttggtggggttaaatgttaagaagcaattctaatgtttaaaataatacgttgatcttcaccagcttatctccgagggtcattt
gi|132538 : ataaaatatatttataagcaattcattcataaaattatatttaaatgcttacattttgccacatttggactattgctatacaatttatatTA--C---C-AATGCGTAAGTTG-T-TTTTTAATGCTTACA--TTTTAC-C-AC-ATTTAT---ATTACTGTTGTGTTATTTGGGGAAA-TTGTAATATTTCACTT-----GTA-G-----ATAAAATT---GT-T---AG-G--TTTC-AA-A--A-GAGA-GCTGCTAGACTTATTCTCG-ATAAAA----AT-TACGATACT-C--------CTTC---TA-CTGAATTATTCACAGAGCTTAAATGGA-TGACGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AGCAG--TACT--T-ATATAT----AAGT--CATTT--AATGAC--CAGGCTCCTGCATATCT-CAAAacgttgatcttcaccagcttatctccgagggtcattt
gi|132539 : GGAAATTA-T-TTTACAGTGGTTATA--TACTTC-C-ATTATTTAATTAATTACTGTTGCACAGTTTGGAATAA-CTGCGCT-TAAGATGG-----ATTTA-----ATCGAA-T---AC-T--AAA-A--TTAC-AG-A--A-AAGA-GCAGCAAGAATTATCCTTA-AT
gi|132540 : aAAAT-A-T-TTT-TAACACACACA--TACTGC-C-AC-ATTTAG---ATTATTGTTGCATCATTTTGGGTAA-CTATAAT-TCAG---------ATTTC-----AAAAAA-T---CT-TCAAAA-A--TTTC-AATAATA-ACGT-GCAGCAAGAATAAAACTGA-ACAAGG--ACTT-G--GAT-TA-CTGGGTATTCATC---TG-CAGAATTATTTGATAAAATG-GCTGGG-TGACATTC-AAAGAAAGAATCCATTAT--AAAACTGCTAGCGGTATACT--C-TTGTTTTC--AAAT--CT-TTG-AACAAT--CTGGCACCGG
gi|132541 : -TTTA-AATGCTTACG----CTTTGC-AC-ATTTGG---ACTCCTTTTGTTCAATTTGGGTAAG-TTGTTCC-TCTGATCTCAGGAATTC----------TA-T---AG-T--CAA-A--CTTC-GA-A--A-GATA-TCTGCTAGA-TTAACCTGG-ACAAAG--ATAA-T--GACACA-T--------CGTCAATTG-AACTATTTTCCAA---ATTGAAATGGA-TGG-ATTCTCCTGATAGAGTTACATAT--CAAAA----TGG----AATA--C-TAATG-TCA-AAAT--AA-TC--AA
gi|132542 : CTTACA--TATTAC-T-TC-ATTTAG---ATAACGGTTGTGTTACTTGGGGGAAGTTGTAATGTTTCACTT-----GTA-G-----ATAAAA-T---TG-T--AAG-A--TTTC-AA-A--A-GAGA-GCTGCTAGACTTTTTCTCA-ATAAAA--AAATAC--GGTATT-C--------CTTC---TA-CATAATTATTCATTAAGCTTAAACTGA-TGACGTTT-CCTGAAAGGGTTAAATTT--CTAAA----GGCAG--TACTCAT-GTATATTTA-AGAG--CA---------------GGCCCCTGCATATTT-CAAA
gi|132543 : ---AT-T--CAA-AGGTTTC-AA-G--A-GAAA-GCTGCTAGATTTATTCTCG-ATAAAA--A--T-TACGATACT-C--------CTTC---TA-CAGAATTATTCACTAAGTTTAAATGGC-TGACGTTT-TCTGAAAGAGTTAAATTT--CAAAA----AGC----AGTA--C-TCATGT--ATAAAT--CATTT--AATGACCATTGGCTCC
gi|132544 : C--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
Alignments
lowQualScore : 11 11 11 22222222 1111111111 1111 11 1
lowQualScore : 44 55 2 6 444 88 2 0 77 2 4 2 444 9 66 888 22 1 2 2 3 1 66 444 1 1 222 333 0 1 11 66666 00000000 222 3333333333 1 22 1 1 22 111 33 1 2 2 1 1 22 4444 77 3 66666666 1 555 1 4444 4 1 1 1 55 2 2 0 555 4444 99999 2 55 2222 33 77 00 44 2 3 8
lowQualScore : .. .. . . ... .. . . .. . . . ... . .. ... .. . . . . . .. ... . . ... ... . . .. ..... ........ ... .......... . .. . . .. ... .. . . . . . .. .... .. . ........ . ... . .... . . . . .. . . . ... .... ..... . .. .... .. .. .. .. . . .
lowQualScore : 11 77 9 1 777 33 7 9 22 1 1 5 111 3 11 222 55 7 0 0 8 9 88 000 0 8 999 000 5 9 66 44444 77777777 222 6666666666 7 44 7 7 44 888 33 0 4 2 9 7 55 3333 55 6 66666666 0 000 6 1111 9 0 0 9 44 0 0 9 888 2222 99999 5 55 9999 99 33 77 22 1 6 2
consensus : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CGATA--CC-TATGCGNAAA-TTA-T-T-TTACAATGCTTACAT--ACTNC-C-A-CATTTA---GATTATTGTTGTACAATTTGGGGAAA-TTGCAAC-TCTGACCT-----ATNTG-----ACAANA-T---AT-T--AAA-A--TTTC-AA-A--A-GNGN-GCTGCNAGACTTATCCTCG-ATAAAG--ACAT-T--GATACA-C--------CNTC---TGAA--GAATTATTTAATGANCTNAAATGGA-TGACGTTC-CCTGAAAGAGTTAAATAT--NAAAA----AGC----TATTC-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
Reference ( family-728 ) : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CGATA--CC-TATGCGNAAA-TTA-T-T-TTACAATGCTTACAT--ACTNC-C-A-CATTTA---GATTATTGTTGTACAATTTGGGGAAA-TTGCAAC-TCTGACCT-----ATNTG-----ACAANA-T---AT-T--AAA-A--TTTC-AA-A--A-GNGN-GCTGCNAGACTTATCCTCG-ATAAAG--ACAT-T--GATACA-C--------CNTC---TGAA--GNATTATTTAATGANCTNAAATGGA-TGACGTTC-CCTGAAAGAGTTAAATAT--NAAAA----AGC----TATTC-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
gi|132520 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCCGAATAAAATACTATTTAT---CAATA--CC-TATTAGGAAA-TTA-T-T-TTACAATTCTTACAT--ACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AT-T--AAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TGAA--ACATTATTTAATGATCTAAAATGGA-TGAAATTC-CATGAAAGAGTAGAATAT--AAAAA----GGC----TATTT-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
gi|132521 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATATAATACTATTTAT---CAATA--CC-TATTAGGAAA-TTA-T-T-TTACAATTCTTACAT--ACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AT-T--AAA-A--TTTC-AA-A--A-ATGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TGAA--ACATTATTTAATAATCTAAAATGGA-TGAAATTC-CATGAAAGAGTAGAGTAC--AAAAA----GGC----TATTT-TA-ATGTTCA-AGAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
gi|132522 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAACAAAATACTATTTAT---CAATA--CC-CATTTGGAAA-TTA-T-T-TTACAATTCTTACAT--ACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACG-T---AT-T--TAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TGAA--ACATTATTTAATGATCTAAAATGGA-TAAAATTC-CATGAAAGAGTAGAATAT--AAAAA----GGC----TATTT-TA-ATGTTCA-AGAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
gi|132523 : AAAAATGCAATTC-CTTA--T----AC---TT--ACT-TGGCAGCATAAAATACTATTTAT---CAATA--CC-TATGAGGAAT-TTA-T-T-T-ACAATTCTTACAT--ACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCCG-----GCAAAA-T---AT-T--GAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACT-ATCCTTG-A-AAAG--ACAT-T--GATACA-C--------CATC---TGAA--TCATTATTTAATGATCTAAAATAGA-TGAAATTC-CATATAAGAGTAGAATAT--AAAAA----GGC----TATTT-TA-ATGTTCA-ACAT--CA-TC--AACAAC--TTGGCCCCAGAGTTTTTGCAAAAT-AATTTT
gi|132524 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCCGAATAAAATACTATTTAT---C-----------------AA-TTA-T-T-TTACAATTCTTACAT--ACTTC-C-T-CATCTA---GACTATAGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AC-T--AAA-A--TTTC-AA-A--A-ATGT-GCTGCAAGACTTGTCCTTG-ATAAAG--ACAT-T--GATACA-C--------CGTC---TGAA--ACATTATTTAATGATCTAAAATGGA-TGA
gi|132525 : AAAAATGCAATTC-CTAA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CAATA--CC-TATTAGGAAA-TAA-C-T-TTATAATTCTTACAA--ACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCCG-----ACAACA-T---AT-T--GAA-A--TTTC-AA-A--A-ATGT-GCTGCAAAATTTATCCTTG-ATAAAG--ACAT-C--AGTACA-C--------CATC---TGA
gi|132526 : AAAAATGTAATTC-TCTG--TTA-TAC---TT--TTTATATCGCATTAAAA-ACT--TCAT---TGACATCCC-TACACGCAAA-CTC-T-T-TTTTAATGCATATAT--TCTGC-C-A-CATTTA---GATTATTGTTGTACCATTTGGGGCAA-CTGCAAT-TCAGAACT------TTTGA----ACAATC-T---CC-T--AAA-A--TTCC-AA-A--A-ACGT-GCAGCGAGAATAATACTCA-ACAAGG--ACTT-T--GAT-TATC--------CATC---TGCA--GAATTATTTGATCAACTTGGCTGAA-TGACATTC-CAGGAAAGATTCCAATAT--AAAAA----GGC----TACTC-TT-GTTTTC--AAAT--C--TCTGAACAAT--CTGGCACCAGCTTATCTCCAGAACAAGTT
gi|132527 : AAAAATGTAATTC-TCTG--TTA-TACCTTTT--ATA-TCGCA---TTAAATACT--TCAT---TGACATCCC-TACACGCAAG-CTC-T-G-TTTTAATGCATATAT--ACTGC-C-A-CATTTA---TATTATTGTTGTACAATTTGGGGCAA-CTGCAAT-TCAGAACT------TTTGA----ACAATC-T---CC-T--TAA-A--TTACAAA-A--A-ACGT-GCAGCGAGAATAATTCTCA-ACAAGG--ACTT-T--GA-ATATC--------TATC---TACA--GAATTATTTGATCAACTTGGCTGGA-TGACATTC-CAGGAAAAAATCCAATAT--AAAAA----GGC----TACTC-T---TGTTTACAAAT--C--TCTGAACAAT--CTGGCACCAGCTTATCTCTAGAACAAGTTT
gi|132528 : AAAAGTGCAATCCACTCA--CTGCTGT---TTTAAAT-AAACAGAATTAAACCATATTTAT---CAATT--AA-TGTGCGTAAA-TTAAT-T-TTAT--TGCTTACGT--CTTGC-C-A-CATCTG---GACTCCTGTTTT-TAACATGAGGAAT-TTGTTCT-TCTGATCTC----ATG-G-----ATTCTA-T---AG-T--CAG-A--TTCC-AA-A--A-GAGA-TCTGCTTGAATTATGTTTGGACAAAG--ATTA-T--GACACA-C--------CGTT---CAAT--GAATTATTTTACGAATTTAAATTGA-TGGAATTC-CCTGATAGAGTTAAATAT--CAAAA----AGC----
gi|132529 : AGAAATGTAATTC-ATTACTTTA-T-C---TTCTATC-TCGCAT--CAAAATATT-TTT-T---CTGTA--CT-AATGCGTAAG-TTG-T-T-TTTTAATGCTTACAT--TTTAC-C-A-CATTTA---GATTACTGTTATGTAATTTAGGGAAA-TTGTAA----TAATTC-----ACGTGTAGATACAAT--T---GC-T---AG-G--TTTT-AA-A--A-GAGA-GCTGCTAGACTAATTCTCG-ATAAAA--ATA--C--AATAAT-C--------CTTC---TACT--GAATTA-TTACAGAGCTTAAATGGA-TGTCGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AACAG--TATT
gi|132530 : AGAAATGTTATTC-ATTACTTTA-T-C---TTCTATC-TCGCAT--CAAAGTATTTCTT-T---CTGTA--CC-AATGCGTAAG-TTG-T-T-TTTTA-TGCTTACAT--TTTAC-C-A-CATTTA---GATTACTGTTGTGTAATTCATAGAAA-TTGTAATATTTCACTT-----GTA-G-----ATAAAATT---GT-T---AG-G--TTTC-AA-A--A-GAGA-GCTGCTAGACTTATTATCG-ATTA----ACAT-TACGATACT-C--------CTTC---TAAT--GAA-TATTCACAGAGCTGAAATGGA-TGACGTTT-CCTGAAAGAGTTAAATTT--CTAAA----AGC----t
gi|132531 : AGAAATGTAATTC-ATTACTTTA-T-C---TTCTATC-TCGCAT--CAAAATATT-TTT-T---CTGTA--CT-AATGCGTAAG-TTG-T-T-TTTTAATGCTTACAT--TTTAC-C-A-CATTTA---GATTACTGTTATGTAATTTAGGTAAA-TTGTAA----TAATTC-----ACGTGTAGATACAAT--T---GC-T---AG-G--TTTT-AA-A--A-GAGA-GCTGCTAGACTAATTCTCG-ATAAAAATACAA-T--AATCCT-T--------CTAC---TGAA--TAATCA--CA--GAGCTTAAATGGA-TGTCGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AGC----agtacttataa
gi|132532 : AAAGTGCATTTT-ATTA--TTG-TAT---AT--ACT-AGGCAGAATAAAATAGTATCTAT---CAATA--C---ATGTTATGA-TTA-TATGTTACAATATTTA-AT--ATAG----A-CATTTA---AA
gi|132532 : T-----ATGTT-----ACAATA-TTTAATAT--AGACA--TTTA-AA-A--A-AAGGTGCTTCTAGACGTATTCTTT-ATAGAT--GCAT-T--GATTCA-C--------AATT---TGGA--TCATTATTTAATAGTACTAAATGGT-TGAAATT--CATGAACGGGTAGAATATAAAAAAA----AGT----TAATC-TA-ATGT--A-AAATAGCA-TT--AACATA--TTATT-----AGTATTTGCTACATAACTTTaaaaggtgcttctagacgtattctttatagatgcattgattcacaatttggatcattatttaatagtactaaatggttgaaattcatgaacgggtagaatataaaaaaaagttaatctaatgtaaaatagcattaacatattattagtatttgctacataacttt
gi|132533 : aaagtgcattttattattgtatatactaggcagaataaaatagtatctatcaatacatgttatgattaAAATGTAATTC-ATTACTTTG-T-C---TTCTACC-TAGCAT--CAAAGTATAACTT-T---CTGTA--CC-AATGCGTAAG-TTG-T-T-TTA--ATGCTTACATTTAATTC-C-A---TTTA---GATAACTGTTGTGTTATTTGGGGAAA-TTGTAATGTTTCACTT-----GTA-G-----ATAAAA-TT--GT-T--AGG----TTTC-AA-A--ACGAGA-GCTGTTAGACTTAATCTCG-ATAAAA--A-ATAC--GACACT-C--------CTTC---CACA--GAATTATTCACAGAGTTAAAAT-GA-TAACGTTT-TCTGAAAAAGTTAAATTTC-AAAAA----AGC----AGTAC-TT-ATGTATA-AA
gi|132534 : C---TT---CT-TAAAAGAATATCATATTATTTAA---C-ATA--TGATATGAATGTA-TTG-T-T-TTACAATGCCTACAT--AATGT-CAA-CATTT----GATTATTGTTGTATTGTTTTGGGAAA-AGGTAA------ACAT-----ATACAAAAT-ACAATA-T---AT-----AA-A--TCTC-AG-A--A-AAGA-GCAGCAAGAATAATACTAA-ATAAccat
gi|132535 : ATCTA---GATTATTGCTGCACAATA-GGGGTAA------AC-TCTGACCT-----ATCTG-----ACAACA-TG--AT--------A--TTTC-AA-A--A-GCGT-GCTGCCAGATTTATCTTTG-ATATAG--ACAG-T--GATGCA-C--------CAGC---TTAA--ACAATATTTAATGATCGTAAACGGA-CGCAATTC-CATGAAAGAG-TAGACAA--TAAAA----AAC----TATTG-GA-ATGT-------------TC--AACAGC--TTGGCCCTGGAGTATTTGCAAAAT-AATTTT
gi|132536 : gcaaaacaacttttaatacaacatttaaaacaactgcattaaaatgtatcaatatatcctaagcatgtacctaGAATTAAATCATATTTAT---CGATT--CA-TGTAAGCAAA-TTA-T-A-TGTTAATGGTTACGT--TTTGT-C-A-CAATTG---GATTATTGTTGTTCAATTTGGGGAAA-TTATTCC-TTTGATCT-----ATA-G-----TCAAAC-T---A-----AAA-A-------AA-A--A-AT----CTGCTACAATTAT-------TA----------T--GACACA-C--------CGTCCATTGAA--CAATT-TTC--CGAAATGAAATGGAGTGA-ATTT-CCTGATAAAGTTGAATAT--CAACA----AGC----AATAA-TA-ATGTACA-AAA
gi|132537 : ATAAAATA-TATTTATAAGCAATT--C---ATTCATAAAATTA-TAT-TTA-AATGCTTACAT--TTTGC-C-A-CATTTG---GACTATTGCTATACAATTT
gi|132537 : CTGCTACAATTATCTTAT-AGAAAA--ATGT-T--ACCACA-C--------CATCC--TGTA--AACTTATATC-TGAATTGAGATGGA-TGGAATTT-CTTGGTGGGGTTAAATGT--TAAGA----AGC----AATTC-TA-ATGTTTA-AAAT--AA-Tatatctgctacaattatcttatagaaaaatgttaccacaccatcctgtaaacttatatctgaattgagatggatggaatttcttggtggggttaaatgttaagaagcaattctaatgtttaaaataatacgttgatcttcaccagcttatctccgagggtcattt
gi|132538 : ataaaatatatttataagcaattcattcataaaattatatttaaatgcttacattttgccacatttggactattgctatacaatttatatTA--CC-AATGCGTAAG-TTG-T-T-TTTTAATGCTTACAT--TTTAC-C-A-CATTTA---TATTACTGTTGTGTTATTTGGGGAAA-TTGTAATATTTCACTT-----GTA-G-----ATAAAA-TT--GT-T--AGG----TTTC-AA-A--A-GAGA-GCTGCTAGACTTATTCTCG-ATAAAA--A--T-TACGATACT-C--------CTTC---TACT--GAATTATTCACAGAGCTTAAATGGA-TGACGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AGC----AGTAC-TT-ATAT--ATAAGT--CATTT--AATGAC--CAGGCTCCTGCATATCT-CAAAacgttgatcttcaccagcttatctccgagggtcattt
gi|132539 : GGAAA-TTA-T-T-TTACAGTGGTTATAT--ACTTC-C-ATTATTTAATTAATTACTGTTGCACAGTTTGGAATAA-CTGCGCT-TAAGATGG-----ATTTA-----ATCGAA-T---AC-T--AAA-A--TTAC-AG-A--A-AAGA-GCAGCAAGAATTATCCTTA-AT
gi|132540 : aAAA-T-A-T-T-TT-TAACACACACAT--ACTGC-C-A-CATTTA---GATTATTGTTGCATCATTTTGGGTAA-CTATAAT-TCAG---------ATTTC-----AAAAAA-T---CT-TCAAAA-A--TTTC-AATAATA-ACGT-GCAGCAAGAATAAAACTGA-ACAAGG--ACTT-G--GAT-TA-CTGGGTATTCATC---TGCA--GAATTATTTGATAAAATG-GCTGGG-TGACATTC-AAAGAAAGAATCCATTAT--AAAACTGCTAGCGGTATACTC-TT-GTTTTC--AAAT--CT-TTG-AACAAT--CTGGCACCGG
gi|132541 : -T-TTA-AATGCTTACG----CTTTGC-A-CATTTG---GACTCCTTTTGTTCAATTTGGGTAAG-TTGTTCC-TCTGATCTCAGGAATTC----------TA-T---AG-T--CAA-A--CTTC-GA-A--A-GATA-TCTGCTAGA-TTAACCTGG-ACAAAG--ATAA-T--GACACA-T--------CGTC-----AATTGAACTATTTTCCAAATTGAAATGGA-TGG-ATTCTCCTGATAGAGTTACATAT--CAAAA----TGG----AATAC-TA-ATG-TCA-AAAT--AA-TC--AA
gi|132542 : CTTACAT--ATTAC-T-T-CATTTA---GATAACGGTTGTGTTACTTGGGGGAAGTTGTAATGTTTCACTT-----GTA-G-----ATAAAA-T---TG-T--AAG-A--TTTC-AA-A--A-GAGA-GCTGCTAGACTTTTTCTCA-ATAAAA--AAATAC--GGTATT-C--------CTTC---TACA--TAATTATTCATTAAGCTTAAACTGA-TGACGTTT-CCTGAAAGGGTTAAATTT--CTAAA----GGCAG--TACTCATGTATATTTA-AGAG--CA---------------GGCCCCTGCATATTT-CAAA
gi|132543 : ---AT-T--CAA-AGGTTTC-AA-G--A-GAAA-GCTGCTAGATTTATTCTCG-ATAAAA--A--T-TACGATACT-C--------CTTC---TACA--GAATTATTCACTAAGTTTAAATGGC-TGACGTTT-TCTGAAAGAGTTAAATTT--CAAAA----AGC----AGTAC-TC-ATGT--ATAAAT--CATTT--AATGACCATTGGCTCC
gi|132544 : C--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
Alignments
lowQualScore : 11 11 11 22222222 1111111111 1111 11 1
lowQualScore : 44 55 2 6 444 88 2 0 77 2 4 2 444 9 66 888 22 1 2 2 3 1 66 22 1 1 1 444 333 0 1 11 66666 00000000 444 4444444444 1 22 1 1 22 111 33 1 2 2 1 1 22 4444 77 3 66666666 1 555 1 333 4 1 1 1 55 2 2 0 555 4444 99999 2 55 2222 33 77 00 44 2 3 8
lowQualScore : .. .. . . ... .. . . .. . . . ... . .. ... .. . . . . . .. .. . . . ... ... . . .. ..... ........ ... .......... . .. . . .. ... .. . . . . . .. .... .. . ........ . ... . ... . . . . .. . . . ... .... ..... . .. .... .. .. .. .. . . .
lowQualScore : 11 77 9 1 777 33 7 9 22 1 1 5 111 3 11 222 55 7 0 0 8 9 88 55 5 0 8 000 000 5 9 66 44444 77777777 000 0000000000 7 44 7 7 44 888 33 0 4 2 9 7 55 3333 55 6 66666666 0 000 6 111 9 0 0 9 44 0 0 9 888 2222 99999 5 55 9999 99 33 77 22 1 6 2
consensus : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CGATA--CC-TATGCGNAAA-TTA-T-T-TTACAATGCTTACA--TACTNC-C-A-CATTTA---GATTATTGTTGTACAATTTGGGGAAA-TTGCAAC-TCTGACCT-----ATNTG-----ACAANA-T---AT-T--AAA-A--TTTC-AA-A--A-GNGN-GCTGCNAGACTTATCCTCG-ATAAAG--ACAT-T--GATACA-C--------CNTC---TGAA--GAATTATTTAATGANCTNAAATGGA-TGACGTTC-CCTGAAAGAGTTAAATAT--NAAAA----AGC----TATTC-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
Reference ( family-728 ) : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CGATA--CC-TATGCGNAAA-TTA-T-T-TTACAATGCTTACA--TACTNC-C-A-CATTTA---GATTATTGTTGTACAATTTGGGGAAA-TTGCAAC-TCTGACCT-----ATNTG-----ACAANA-T---AT-T--AAA-A--TTTC-AA-A--A-GNGN-GCTGCNAGACTTATCCTCG-ATAAAG--ACAT-T--GATACA-C--------CNTC---TGAA--GAATTATTTAATGANCTNAAATGGA-TGACGTTC-CCTGAAAGAGTTAAATAT--NAAAA----AGC----TATTC-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
gi|132520 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCCGAATAAAATACTATTTAT---CAATA--CC-TATTAGGAAA-TTA-T-T-TTACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AT-T--AAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TGAA--ACATTATTTAATGATCTAAAATGGA-TGAAATTC-CATGAAAGAGTAGAATAT--AAAAA----GGC----TATTT-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
gi|132521 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATATAATACTATTTAT---CAATA--CC-TATTAGGAAA-TTA-T-T-TTACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AT-T--AAA-A--TTTC-AA-A--A-ATGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TGAA--ACATTATTTAATAATCTAAAATGGA-TGAAATTC-CATGAAAGAGTAGAGTAC--AAAAA----GGC----TATTT-TA-ATGTTCA-AGAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
gi|132522 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAACAAAATACTATTTAT---CAATA--CC-CATTTGGAAA-TTA-T-T-TTACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACG-T---AT-T--TAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TGAA--ACATTATTTAATGATCTAAAATGGA-TAAAATTC-CATGAAAGAGTAGAATAT--AAAAA----GGC----TATTT-TA-ATGTTCA-AGAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
gi|132523 : AAAAATGCAATTC-CTTA--T----AC---TT--ACT-TGGCAGCATAAAATACTATTTAT---CAATA--CC-TATGAGGAAT-TTA-T-T-T-ACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCCG-----GCAAAA-T---AT-T--GAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACT-ATCCTTG-A-AAAG--ACAT-T--GATACA-C--------CATC---TGAA--TCATTATTTAATGATCTAAAATAGA-TGAAATTC-CATATAAGAGTAGAATAT--AAAAA----GGC----TATTT-TA-ATGTTCA-ACAT--CA-TC--AACAAC--TTGGCCCCAGAGTTTTTGCAAAAT-AATTTT
gi|132524 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCCGAATAAAATACTATTTAT---C-----------------AA-TTA-T-T-TTACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATAGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AC-T--AAA-A--TTTC-AA-A--A-ATGT-GCTGCAAGACTTGTCCTTG-ATAAAG--ACAT-T--GATACA-C--------CGTC---TGAA--ACATTATTTAATGATCTAAAATGGA-TGA
gi|132525 : AAAAATGCAATTC-CTAA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CAATA--CC-TATTAGGAAA-TAA-C-T-TTATAATTCTTACA--AACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCCG-----ACAACA-T---AT-T--GAA-A--TTTC-AA-A--A-ATGT-GCTGCAAAATTTATCCTTG-ATAAAG--ACAT-C--AGTACA-C--------CATC---TGA
gi|132526 : AAAAATGTAATTC-TCTG--TTA-TAC---TT--TTTATATCGCATTAAAA-ACT--TCAT---TGACATCCC-TACACGCAAA-CTC-T-T-TTTTAATGCATATA--TTCTGC-C-A-CATTTA---GATTATTGTTGTACCATTTGGGGCAA-CTGCAAT-TCAGAACT------TTTGA----ACAATC-T---CC-T--AAA-A--TTCC-AA-A--A-ACGT-GCAGCGAGAATAATACTCA-ACAAGG--ACTT-T--GAT-TATC--------CATC---TGCA--GAATTATTTGATCAACTTGGCTGAA-TGACATTC-CAGGAAAGATTCCAATAT--AAAAA----GGC----TACTC-TT-GTTTTC--AAAT--C--TCTGAACAAT--CTGGCACCAGCTTATCTCCAGAACAAGTT
gi|132527 : AAAAATGTAATTC-TCTG--TTA-TACCTTTT--ATA-TCGCA---TTAAATACT--TCAT---TGACATCCC-TACACGCAAG-CTC-T-G-TTTTAATGCATATA--TACTGC-C-A-CATTTA---TATTATTGTTGTACAATTTGGGGCAA-CTGCAAT-TCAGAACT------TTTGA----ACAATC-T---CC-T--TAA-A--TTACAAA-A--A-ACGT-GCAGCGAGAATAATTCTCA-ACAAGG--ACTT-T--GA-ATATC--------TATC---TACA--GAATTATTTGATCAACTTGGCTGGA-TGACATTC-CAGGAAAAAATCCAATAT--AAAAA----GGC----TACTC-T---TGTTTACAAAT--C--TCTGAACAAT--CTGGCACCAGCTTATCTCTAGAACAAGTTT
gi|132528 : AAAAGTGCAATCCACTCA--CTGCTGT---TTTAAAT-AAACAGAATTAAACCATATTTAT---CAATT--AA-TGTGCGTAAA-TTAAT-T-TTAT--TGCTTACG--TCTTGC-C-A-CATCTG---GACTCCTGTTTT-TAACATGAGGAAT-TTGTTCT-TCTGATCTC----ATG-G-----ATTCTA-T---AG-T--CAG-A--TTCC-AA-A--A-GAGA-TCTGCTTGAATTATGTTTGGACAAAG--ATTA-T--GACACA-C--------CGTT---CAAT--GAATTATTTTACGAATTTAAATTGA-TGGAATTC-CCTGATAGAGTTAAATAT--CAAAA----AGC----
gi|132529 : AGAAATGTAATTC-ATTACTTTA-T-C---TTCTATC-TCGCAT--CAAAATATT-TTT-T---CTGTA--CT-AATGCGTAAG-TTG-T-T-TTTTAATGCTTACA--TTTTAC-C-A-CATTTA---GATTACTGTTATGTAATTTAGGGAAA-TTGTAA----TAATTC-----ACGTGTAGATACAAT--T---GC-T---AG-G--TTTT-AA-A--A-GAGA-GCTGCTAGACTAATTCTCG-ATAAAA--ATA--C--AATAAT-C--------CTTC---TACT--GAATTA-TTACAGAGCTTAAATGGA-TGTCGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AACAG--TATT
gi|132530 : AGAAATGTTATTC-ATTACTTTA-T-C---TTCTATC-TCGCAT--CAAAGTATTTCTT-T---CTGTA--CC-AATGCGTAAG-TTG-T-T-TTTTA-TGCTTACA--TTTTAC-C-A-CATTTA---GATTACTGTTGTGTAATTCATAGAAA-TTGTAATATTTCACTT-----GTA-G-----ATAAAATT---GT-T---AG-G--TTTC-AA-A--A-GAGA-GCTGCTAGACTTATTATCG-ATTA----ACAT-TACGATACT-C--------CTTC---TAAT--GAA-TATTCACAGAGCTGAAATGGA-TGACGTTT-CCTGAAAGAGTTAAATTT--CTAAA----AGC----t
gi|132531 : AGAAATGTAATTC-ATTACTTTA-T-C---TTCTATC-TCGCAT--CAAAATATT-TTT-T---CTGTA--CT-AATGCGTAAG-TTG-T-T-TTTTAATGCTTACA--TTTTAC-C-A-CATTTA---GATTACTGTTATGTAATTTAGGTAAA-TTGTAA----TAATTC-----ACGTGTAGATACAAT--T---GC-T---AG-G--TTTT-AA-A--A-GAGA-GCTGCTAGACTAATTCTCG-ATAAAAATACAA-T--AATCCT-T--------CTAC---TGAA--TAATCA--CA--GAGCTTAAATGGA-TGTCGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AGC----agtacttataa
gi|132532 : AAAGTGCATTTT-ATTA--TTG-TAT---AT--ACT-AGGCAGAATAAAATAGTATCTAT---CAATA--C---ATGTTATGA-TTA-TATGTTACAATATTTA-A--TATAG----A-CATTTA---AA
gi|132532 : T-----ATGTT-----ACAATA-TTTAATAT--AGACA--TTTA-AA-A--A-AAGGTGCTTCTAGACGTATTCTTT-ATAGAT--GCAT-T--GATTCA-C--------AATT---TGGA--TCATTATTTAATAGTACTAAATGGT-TGAAATT--CATGAACGGGTAGAATATAAAAAAA----AGT----TAATC-TA-ATGT--A-AAATAGCA-TT--AACATA--TTATT-----AGTATTTGCTACATAACTTTaaaaggtgcttctagacgtattctttatagatgcattgattcacaatttggatcattatttaatagtactaaatggttgaaattcatgaacgggtagaatataaaaaaaagttaatctaatgtaaaatagcattaacatattattagtatttgctacataacttt
gi|132533 : aaagtgcattttattattgtatatactaggcagaataaaatagtatctatcaatacatgttatgattaAAATGTAATTC-ATTACTTTG-T-C---TTCTACC-TAGCAT--CAAAGTATAACTT-T---CTGTA--CC-AATGCGTAAG-TTG-T-T-TTA--ATGCTTACATTTAATTC-----CATTTA---GATAACTGTTGTGTTATTTGGGGAAA-TTGTAATGTTTCACTT-----GTA-G-----ATAAAATT---GT-T---AG-G--TTTC-AA-A--ACGAGA-GCTGTTAGACTTAATCTCG-ATAAAA--A-ATAC--GACACT-C--------CTTC---CACA--GAATTATTCACAGAGTTAAAAT-GA-TAACGTTT-TCTGAAAAAGTTAAATTTC-AAAAA----AGC----AGTAC-TT-ATGTATA-AA
gi|132534 : C---TT---CT-TAAAAGAATATCATATTATTTAA---C-ATA--TGATATGAATGTA-TTG-T-T-TTACAATGCCTACA--TAATGT-CAA-CATTT----GATTATTGTTGTATTGTTTTGGGAAA-AGGTAA------ACAT-----ATACAAAAT-ACAATA-T---AT-----AA-A--TCTC-AG-A--A-AAGA-GCAGCAAGAATAATACTAA-ATAAccat
gi|132535 : ATCTA---GATTATTGCTGCACAATA-GGGGTAA------AC-TCTGACCT-----ATCTG-----ACAACA-TG--AT--------A--TTTC-AA-A--A-GCGT-GCTGCCAGATTTATCTTTG-ATATAG--ACAG-T--GATGCA-C--------CAGC---TTAA--ACAATATTTAATGATCGTAAACGGA-CGCAATTC-CATGAAAGAG-TAGACAA--TAAAA----AAC----TATTG-GA-ATGT-------------TC--AACAGC--TTGGCCCTGGAGTATTTGCAAAAT-AATTTT
gi|132536 : gcaaaacaacttttaatacaacatttaaaacaactgcattaaaatgtatcaatatatcctaagcatgtacctaGAATTAAATCATATTTAT---CGATT--CA-TGTAAGCAAA-TTA-T-A-TGTTAATGGTTACG--TTTTGT-C-A-CAATTG---GATTATTGTTGTTCAATTTGGGGAAA-TTATTCC-TTTGATCT-----ATA-G-----TCAAAC-T---A-----AAA-A-------AA-A--A-AT----CTGCTACAATTAT-------TA----------T--GACACA-C--------CGTCCATTGAA--CAATT-TTC--CGAAATGAAATGGAGTGA-ATTT-CCTGATAAAGTTGAATAT--CAACA----AGC----AATAA-TA-ATGTACA-AAA
gi|132537 : ATAAAATA-TATTTATAAGCAATT--C---ATTCATAAAATTA-TAT-TTA-AATGCTTACA--TTTTGC-C-A-CATTTG---GACTATTGCTATACAATTT
gi|132537 : CTGCTACAATTATCTTAT-AGAAAA--ATGT-T--ACCACA-C--------CATCC--TGTA--AACTTATATC-TGAATTGAGATGGA-TGGAATTT-CTTGGTGGGGTTAAATGT--TAAGA----AGC----AATTC-TA-ATGTTTA-AAAT--AA-Tatatctgctacaattatcttatagaaaaatgttaccacaccatcctgtaaacttatatctgaattgagatggatggaatttcttggtggggttaaatgttaagaagcaattctaatgtttaaaataatacgttgatcttcaccagcttatctccgagggtcattt
gi|132538 : ataaaatatatttataagcaattcattcataaaattatatttaaatgcttacattttgccacatttggactattgctatacaatttatatTA--CC-AATGCGTAAG-TTG-T-T-TTTTAATGCTTACA--TTTTAC-C-A-CATTTA---TATTACTGTTGTGTTATTTGGGGAAA-TTGTAATATTTCACTT-----GTA-G-----ATAAAA-TT--GT-T--AGG----TTTC-AA-A--A-GAGA-GCTGCTAGACTTATTCTCG-ATAAAA--A--T-TACGATACT-C--------CTTC---TACT--GAATTATTCACAGAGCTTAAATGGA-TGACGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AGC----AGTAC-TT-ATAT--ATAAGT--CATTT--AATGAC--CAGGCTCCTGCATATCT-CAAAacgttgatcttcaccagcttatctccgagggtcattt
gi|132539 : GGAAA-TTA-T-T-TTACAGTGGTTATA--TACTTC-C-ATTATTTAATTAATTACTGTTGCACAGTTTGGAATAA-CTGCGCT-TAAGATGG-----ATTTA-----ATCGAA-T---AC-T--AAA-A--TTAC-AG-A--A-AAGA-GCAGCAAGAATTATCCTTA-AT
gi|132540 : aAAA-T-A-T-T-TT-TAACACACACA--TACTGC-C-A-CATTTA---GATTATTGTTGCATCATTTTGGGTAA-CTATAAT-TCAG---------ATTTC-----AAAAAA-T---CT-TCAAAA-A--TTTC-AATAATA-ACGT-GCAGCAAGAATAAAACTGA-ACAAGG--ACTT-G--GAT-TA-CTGGGTATTCATC---TGCA--GAATTATTTGATAAAATG-GCTGGG-TGACATTC-AAAGAAAGAATCCATTAT--AAAACTGCTAGCGGTATACTC-TT-GTTTTC--AAAT--CT-TTG-AACAAT--CTGGCACCGG
gi|132541 : -T-TTA-AATGCTTACG----CTTTGC-A-CATTTG---GACTCCTTTTGTTCAATTTGGGTAAG-TTGTTCC-TCTGATCTCAGGAATTC----------TA-T---AG-T--CAA-A--CTTC-GA-A--A-GATA-TCTGCTAGA-TTAACCTGG-ACAAAG--ATAA-T--GACACA-T--------CGTC-----AATTGAACTATTTTCCAAATTGAAATGGA-TGG-ATTCTCCTGATAGAGTTACATAT--CAAAA----TGG----AATAC-TA-ATG-TCA-AAAT--AA-TC--AA
gi|132542 : CTTACA--TATTAC-T-T-CATTTA---GATAACGGTTGTGTTACTTGGGGGAAGTTGTAATGTTTCACTT-----GTA-G-----ATAAAA-T---TG-T--AAG-A--TTTC-AA-A--A-GAGA-GCTGCTAGACTTTTTCTCA-ATAAAA--AAATAC--GGTATT-C--------CTTC---TACA--TAATTATTCATTAAGCTTAAACTGA-TGACGTTT-CCTGAAAGGGTTAAATTT--CTAAA----GGCAG--TACTCATGTATATTTA-AGAG--CA---------------GGCCCCTGCATATTT-CAAA
gi|132543 : ---AT-T--CAA-AGGTTTC-AA-G--A-GAAA-GCTGCTAGATTTATTCTCG-ATAAAA--A--T-TACGATACT-C--------CTTC---TACA--GAATTATTCACTAAGTTTAAATGGC-TGACGTTT-TCTGAAAGAGTTAAATTT--CAAAA----AGC----AGTAC-TC-ATGT--ATAAAT--CATTT--AATGACCATTGGCTCC
gi|132544 : C--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
Alignments
lowQualScore : 11 11 11 22222222 1111111111 1111 11 1
lowQualScore : 44 55 2 6 444 88 2 0 77 2 4 2 444 9 66 888 22 1 2 2 3 1 66 22 1 1 1 444 333 0 1 11 66666 00000000 444 4444444444 1 22 1 1 22 111 33 1 2 2 1 1 22 4444 77 3 66666666 1 555 1 333 4 1 1 1 55 2 2 0 555 4444 99999 2 55 2222 33 77 00 44 2 3 8
lowQualScore : .. .. . . ... .. . . .. . . . ... . .. ... .. . . . . . .. .. . . . ... ... . . .. ..... ........ ... .......... . .. . . .. ... .. . . . . . .. .... .. . ........ . ... . ... . . . . .. . . . ... .... ..... . .. .... .. .. .. .. . . .
lowQualScore : 11 77 9 1 777 33 7 9 22 1 1 5 111 3 11 222 55 7 0 0 8 9 88 55 5 0 8 000 000 5 9 66 44444 77777777 000 0000000000 7 44 7 7 44 888 33 0 4 2 9 7 55 3333 55 6 66666666 0 000 6 111 9 0 0 9 44 0 0 9 888 2222 99999 5 55 9999 99 33 77 22 1 6 2
consensus : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CGATA--CC-TATGCGNAAA-TTA-T-T-TTACAATGCTTACA--TACTNC-C-A-CATTTA---GATTATTGTTGTACAATTTGGGGAAA-TTGCAAC-TCTGACCT-----ATNTG-----ACAANA-T---AT-T--AAA-A--TTTC-AA-A--A-GNGN-GCTGCNAGACTTATCCTCG-ATAAAG--ACAT-T--GATACA-C--------CNTC---TGAA--GAATTATTTAATGANCTNAAATGGA-TGACGTTC-CCTGAAAGAGTTAAATAT--NAAAA----AGC----TATTC-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
Reference ( family-728 ) : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CGATA--CC-TATGCGNAAA-TTA-T-T-TTACAATGCTTACA--TACTNC-C-A-CATTTA---GATTATTGTTGTACAATTTGGGGAAA-TTGCAAC-TCTGACCT-----ATNTG-----ACAANA-T---AT-T--AAA-A--TTTC-AA-A--A-GNGN-GCTGCNAGACTTATCCTCG-ATAAAG--ACAT-T--GATACA-C--------CNTC---TGAA--GAATTATTTAATGANCTNAAATGGA-TGACGTTC-CCTGAAAGAGTTAAATAT--NAAAA----AGC----TATTC-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
gi|132520 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCCGAATAAAATACTATTTAT---CAATA--CC-TATTAGGAAA-TTA-T-T-TTACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AT-T--AAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TGAA--ACATTATTTAATGATCTAAAATGGA-TGAAATTC-CATGAAAGAGTAGAATAT--AAAAA----GGC----TATTT-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
gi|132521 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATATAATACTATTTAT---CAATA--CC-TATTAGGAAA-TTA-T-T-TTACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AT-T--AAA-A--TTTC-AA-A--A-ATGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TGAA--ACATTATTTAATAATCTAAAATGGA-TGAAATTC-CATGAAAGAGTAGAGTAC--AAAAA----GGC----TATTT-TA-ATGTTCA-AGAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
gi|132522 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAACAAAATACTATTTAT---CAATA--CC-CATTTGGAAA-TTA-T-T-TTACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACG-T---AT-T--TAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TGAA--ACATTATTTAATGATCTAAAATGGA-TAAAATTC-CATGAAAGAGTAGAATAT--AAAAA----GGC----TATTT-TA-ATGTTCA-AGAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
gi|132523 : AAAAATGCAATTC-CTTA--T----AC---TT--ACT-TGGCAGCATAAAATACTATTTAT---CAATA--CC-TATGAGGAAT-TTA-T-T-T-ACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCCG-----GCAAAA-T---AT-T--GAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACT-ATCCTTG-A-AAAG--ACAT-T--GATACA-C--------CATC---TGAA--TCATTATTTAATGATCTAAAATAGA-TGAAATTC-CATATAAGAGTAGAATAT--AAAAA----GGC----TATTT-TA-ATGTTCA-ACAT--CA-TC--AACAAC--TTGGCCCCAGAGTTTTTGCAAAAT-AATTTT
gi|132524 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCCGAATAAAATACTATTTAT---C-----------------AA-TTA-T-T-TTACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATAGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AC-T--AAA-A--TTTC-AA-A--A-ATGT-GCTGCAAGACTTGTCCTTG-ATAAAG--ACAT-T--GATACA-C--------CGTC---TGAA--ACATTATTTAATGATCTAAAATGGA-TGA
gi|132525 : AAAAATGCAATTC-CTAA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CAATA--CC-TATTAGGAAA-TAA-C-T-TTATAATTCTTACA--AACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCCG-----ACAACA-T---AT-T--GAA-A--TTTC-AA-A--A-ATGT-GCTGCAAAATTTATCCTTG-ATAAAG--ACAT-C--AGTACA-C--------CATC---TGA
gi|132526 : AAAAATGTAATTC-TCTG--TTA-TAC---TT--TTTATATCGCATTAAAA-ACT--TCAT---TGACATCCC-TACACGCAAA-CTC-T-T-TTTTAATGCATATA--TTCTGC-C-A-CATTTA---GATTATTGTTGTACCATTTGGGGCAA-CTGCAAT-TCAGAACT------TTTGA----ACAATC-T---CC-T--AAA-A--TTCC-AA-A--A-ACGT-GCAGCGAGAATAATACTCA-ACAAGG--ACTT-T--GAT-TATC--------CATC---TGCA--GAATTATTTGATCAACTTGGCTGAA-TGACATTC-CAGGAAAGATTCCAATAT--AAAAA----GGC----TACTC-TT-GTTTTC--AAAT--C--TCTGAACAAT--CTGGCACCAGCTTATCTCCAGAACAAGTT
gi|132527 : AAAAATGTAATTC-TCTG--TTA-TACCTTTT--ATA-TCGCA---TTAAATACT--TCAT---TGACATCCC-TACACGCAAG-CTC-T-G-TTTTAATGCATATA--TACTGC-C-A-CATTTA---TATTATTGTTGTACAATTTGGGGCAA-CTGCAAT-TCAGAACT------TTTGA----ACAATC-T---CC-T--TAA-A--TTACAAA-A--A-ACGT-GCAGCGAGAATAATTCTCA-ACAAGG--ACTT-T--GA-ATATC--------TATC---TACA--GAATTATTTGATCAACTTGGCTGGA-TGACATTC-CAGGAAAAAATCCAATAT--AAAAA----GGC----TACTC-T---TGTTTACAAAT--C--TCTGAACAAT--CTGGCACCAGCTTATCTCTAGAACAAGTTT
gi|132528 : AAAAGTGCAATCCACTCA--CTGCTGT---TTTAAAT-AAACAGAATTAAACCATATTTAT---CAATT--AA-TGTGCGTAAA-TTAAT-T-TTAT--TGCTTACG--TCTTGC-C-A-CATCTG---GACTCCTGTTTT-TAACATGAGGAAT-TTGTTCT-TCTGATCTC----ATG-G-----ATTCTA-T---AG-T--CAG-A--TTCC-AA-A--A-GAGA-TCTGCTTGAATTATGTTTGGACAAAG--ATTA-T--GACACA-C--------CGTT---CAAT--GAATTATTTTACGAATTTAAATTGA-TGGAATTC-CCTGATAGAGTTAAATAT--CAAAA----AGC----
gi|132529 : AGAAATGTAATTC-ATTACTTTA-T-C---TTCTATC-TCGCAT--CAAAATATT-TTT-T---CTGTA--CT-AATGCGTAAG-TTG-T-T-TTTTAATGCTTACA--TTTTAC-C-A-CATTTA---GATTACTGTTATGTAATTTAGGGAAA-TTGTAA----TAATTC-----ACGTGTAGATACAAT--T---GC-T---AG-G--TTTT-AA-A--A-GAGA-GCTGCTAGACTAATTCTCG-ATAAAA--ATA--C--AATAAT-C--------CTTC---TACT--GAATTA-TTACAGAGCTTAAATGGA-TGTCGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AACAG--TATT
gi|132530 : AGAAATGTTATTC-ATTACTTTA-T-C---TTCTATC-TCGCAT--CAAAGTATTTCTT-T---CTGTA--CC-AATGCGTAAG-TTG-T-T-TTTTA-TGCTTACA--TTTTAC-C-A-CATTTA---GATTACTGTTGTGTAATTCATAGAAA-TTGTAATATTTCACTT-----GTA-G-----ATAAAATT---GT-T---AG-G--TTTC-AA-A--A-GAGA-GCTGCTAGACTTATTATCG-ATTA----ACAT-TACGATACT-C--------CTTC---TAAT--GAA-TATTCACAGAGCTGAAATGGA-TGACGTTT-CCTGAAAGAGTTAAATTT--CTAAA----AGC----t
gi|132531 : AGAAATGTAATTC-ATTACTTTA-T-C---TTCTATC-TCGCAT--CAAAATATT-TTT-T---CTGTA--CT-AATGCGTAAG-TTG-T-T-TTTTAATGCTTACA--TTTTAC-C-A-CATTTA---GATTACTGTTATGTAATTTAGGTAAA-TTGTAA----TAATTC-----ACGTGTAGATACAAT--T---GC-T---AG-G--TTTT-AA-A--A-GAGA-GCTGCTAGACTAATTCTCG-ATAAAAATACAA-T--AATCCT-T--------CTAC---TGAA--TAATCA--CA--GAGCTTAAATGGA-TGTCGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AGC----agtacttataa
gi|132532 : AAAGTGCATTTT-ATTA--TTG-TAT---AT--ACT-AGGCAGAATAAAATAGTATCTAT---CAATA--C---ATGTTATGA-TTA-TATGTTACAATATTTA-A--TATAG----A-CATTTA---AA
gi|132532 : T-----ATGTT-----ACAATA-TTTAATAT--AGACA--TTTA-AA-A--A-AAGGTGCTTCTAGACGTATTCTTT-ATAGAT--GCAT-T--GATTCA-C--------AATT---TGGA--TCATTATTTAATAGTACTAAATGGT-TGAAATT--CATGAACGGGTAGAATATAAAAAAA----AGT----TAATC-TA-ATGT--A-AAATAGCA-TT--AACATA--TTATT-----AGTATTTGCTACATAACTTTaaaaggtgcttctagacgtattctttatagatgcattgattcacaatttggatcattatttaatagtactaaatggttgaaattcatgaacgggtagaatataaaaaaaagttaatctaatgtaaaatagcattaacatattattagtatttgctacataacttt
gi|132533 : aaagtgcattttattattgtatatactaggcagaataaaatagtatctatcaatacatgttatgattaAAATGTAATTC-ATTACTTTG-T-C---TTCTACC-TAGCAT--CAAAGTATAACTT-T---CTGTA--CC-AATGCGTAAG-TTG-T-T-TTA--ATGCTTACATTTAATTC-----CATTTA---GATAACTGTTGTGTTATTTGGGGAAA-TTGTAATGTTTCACTT-----GTA-G-----ATAAAATT---GT-T---AG-G--TTTC-AA-A--ACGAGA-GCTGTTAGACTTAATCTCG-ATAAAA--A-ATAC--GACACT-C--------CTTC---CACA--GAATTATTCACAGAGTTAAAAT-GA-TAACGTTT-TCTGAAAAAGTTAAATTTC-AAAAA----AGC----AGTAC-TT-ATGTATA-AA
gi|132534 : C---TT---CT-TAAAAGAATATCATATTATTTAA---C-ATA--TGATATGAATGTA-TTG-T-T-TTACAATGCCTACA--TAATGT-CAA-CATTT----GATTATTGTTGTATTGTTTTGGGAAA-AGGTAA------ACAT-----ATACAAAAT-ACAATA-T---AT-----AA-A--TCTC-AG-A--A-AAGA-GCAGCAAGAATAATACTAA-ATAAccat
gi|132535 : ATCTA---GATTATTGCTGCACAATA-GGGGTAA------AC-TCTGACCT-----ATCTG-----ACAACA-TG--AT--------A--TTTC-AA-A--A-GCGT-GCTGCCAGATTTATCTTTG-ATATAG--ACAG-T--GATGCA-C--------CAGC---TTAA--ACAATATTTAATGATCGTAAACGGA-CGCAATTC-CATGAAAGAG-TAGACAA--TAAAA----AAC----TATTG-GA-ATGT-------------TC--AACAGC--TTGGCCCTGGAGTATTTGCAAAAT-AATTTT
gi|132536 : gcaaaacaacttttaatacaacatttaaaacaactgcattaaaatgtatcaatatatcctaagcatgtacctaGAATTAAATCATATTTAT---CGATT--CA-TGTAAGCAAA-TTA-T-A-TGTTAATGGTTACG--TTTTGT-C-A-CAATTG---GATTATTGTTGTTCAATTTGGGGAAA-TTATTCC-TTTGATCT-----ATA-G-----TCAAAC-T---A-----AAA-A-------AA-A--A-AT----CTGCTACAATTAT-------TA----------T--GACACA-C--------CGTCCATTGAA--CAATT-TTC--CGAAATGAAATGGAGTGA-ATTT-CCTGATAAAGTTGAATAT--CAACA----AGC----AATAA-TA-ATGTACA-AAA
gi|132537 : ATAAAATA-TATTTATAAGCAATT--C---ATTCATAAAATTA-TAT-TTA-AATGCTTACA--TTTTGC-C-A-CATTTG---GACTATTGCTATACAATTT
gi|132537 : CTGCTACAATTATCTTAT-AGAAAA--ATGT-T--ACCACA-C--------CATCC--TGTA--AACTTATATC-TGAATTGAGATGGA-TGGAATTT-CTTGGTGGGGTTAAATGT--TAAGA----AGC----AATTC-TA-ATGTTTA-AAAT--AA-Tatatctgctacaattatcttatagaaaaatgttaccacaccatcctgtaaacttatatctgaattgagatggatggaatttcttggtggggttaaatgttaagaagcaattctaatgtttaaaataatacgttgatcttcaccagcttatctccgagggtcattt
gi|132538 : ataaaatatatttataagcaattcattcataaaattatatttaaatgcttacattttgccacatttggactattgctatacaatttatatTA--CC-AATGCGTAAG-TTG-T-T-TTTTAATGCTTACA--TTTTAC-C-A-CATTTA---TATTACTGTTGTGTTATTTGGGGAAA-TTGTAATATTTCACTT-----GTA-G-----ATAAAA-TT--GT-T--AGG----TTTC-AA-A--A-GAGA-GCTGCTAGACTTATTCTCG-ATAAAA--A--T-TACGATACT-C--------CTTC---TACT--GAATTATTCACAGAGCTTAAATGGA-TGACGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AGC----AGTAC-TT-ATAT--ATAAGT--CATTT--AATGAC--CAGGCTCCTGCATATCT-CAAAacgttgatcttcaccagcttatctccgagggtcattt
gi|132539 : GGAAA-TTA-T-T-TTACAGTGGTTATA--TACTTC-C-ATTATTTAATTAATTACTGTTGCACAGTTTGGAATAA-CTGCGCT-TAAGATGG-----ATTTA-----ATCGAA-T---AC-T--AAA-A--TTAC-AG-A--A-AAGA-GCAGCAAGAATTATCCTTA-AT
gi|132540 : aAAA-T-A-T-T-TT-TAACACACACA--TACTGC-C-A-CATTTA---GATTATTGTTGCATCATTTTGGGTAA-CTATAAT-TCAG---------ATTTC-----AAAAAA-T---CT-TCAAAA-A--TTTC-AATAATA-ACGT-GCAGCAAGAATAAAACTGA-ACAAGG--ACTT-G--GAT-TA-CTGGGTATTCATC---TGCA--GAATTATTTGATAAAATG-GCTGGG-TGACATTC-AAAGAAAGAATCCATTAT--AAAACTGCTAGCGGTATACTC-TT-GTTTTC--AAAT--CT-TTG-AACAAT--CTGGCACCGG
gi|132541 : -T-TTA-AATGCTTACG----CTTTGC-A-CATTTG---GACTCCTTTTGTTCAATTTGGGTAAG-TTGTTCC-TCTGATCTCAGGAATTC----------TA-T---AG-T--CAA-A--CTTC-GA-A--A-GATA-TCTGCTAGA-TTAACCTGG-ACAAAG--ATAA-T--GACACA-T--------CGTC-----AATTGAACTATTTTCCAAATTGAAATGGA-TGG-ATTCTCCTGATAGAGTTACATAT--CAAAA----TGG----AATAC-TA-ATG-TCA-AAAT--AA-TC--AA
gi|132542 : CTTACA--TATTAC-T-T-CATTTA---GATAACGGTTGTGTTACTTGGGGGAAGTTGTAATGTTTCACTT-----GTA-G-----ATAAAA-T---TG-T--AAG-A--TTTC-AA-A--A-GAGA-GCTGCTAGACTTTTTCTCA-ATAAAA--AAATAC--GGTATT-C--------CTTC---TACA--TAATTATTCATTAAGCTTAAACTGA-TGACGTTT-CCTGAAAGGGTTAAATTT--CTAAA----GGCAG--TACTCATGTATATTTA-AGAG--CA---------------GGCCCCTGCATATTT-CAAA
gi|132543 : ---AT-T--CAA-AGGTTTC-AA-G--A-GAAA-GCTGCTAGATTTATTCTCG-ATAAAA--A--T-TACGATACT-C--------CTTC---TACA--GAATTATTCACTAAGTTTAAATGGC-TGACGTTT-TCTGAAAGAGTTAAATTT--CAAAA----AGC----AGTAC-TC-ATGT--ATAAAT--CATTT--AATGACCATTGGCTCC
gi|132544 : C--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
blockSeqs : AC CT C A CTT TA A GA C A A AAG A TC GAT TA G A A A G AC TT A T G AA ATT G TA CAGGA GTGTAGAT AAT TTAATATA C GG A T AT CGA GT A C C T G AT AATA AC T TGGGTATT A CAT A TTG A T A G AA T A AAA TGCT GGTAT A GT TTAC AG AT TG CA C G A
blockSeqs : C CT . A . CT . GA C A A . A TC CT TT G . . A . AC . A T . AT . . TG C GTGTAGAT AAT CTTCAA . . . . . AT T A C C T . . CAT AC T . A C A A A T A . AA . A CA . AGT . A TCA . AT TG . C G A
blockSeqs : C CT . A . CT . GC C A A . A . CC GA G . . . . AC . A T . T . . TA . ACAAAAT CA TGTTA . . . . . AC T A C C T . . CAT AC . . A . A A A T A . AA . A A . AGT . A TCA . A G . C G A
blockSeqs : C CT . A . CT . GA C A A . A . CT TA G . . . . AC . A T . T . . TG . TTGA CG ATTA . . . . . AC T A C C T . . CAT . . . G . A T A T A . CA . A A . T . A TCA . A . . A C .
blockSeqs : C . . A . CT . GA C A A . G . CT AC C . . . . AT . A T . T . . C . TTGA AA ATTT . . . . . AT T A T C T . . CAT . . . A . A A A A T . CA . A A . T . T ATA . A . . A C .
blockSeqs : C . . A . . . CA C A A . G . CT AC C . . . . TT . T G . T . . C . CTG CA ATTG . . . . . AT T G A A C . . CAT . . . A . C G A A T . AA . C A . T . A ACA . A . . C G .
blockSeqs : T . . A . . . GA C T A . A . CT GC T . . . . TT . A G . T . . C . CTG CA ACTA . . . . . AC T G A T C . . CTT . . . A . C G A A T . CG . C A . T . T TTA . A . . T G .
blockSeqs : T . . G . . . GA A A A . T . AT GC T . . . . AT . C G . A . . C . CCG TC ATTG . . . . . AC T T A G T . . CTT . . . G . A G C G T . CG . C C . T . A TCA . T . . A G .
blockSeqs : A . . A . . . GA T A A . T . TA GC T . . . . TT . T A . A . . C . CTG TC CCTA . . . . . GA A T C T C . . TTA . . . T . C G C G G . CG . C C . T . A TTA . A . . C .
blockSeqs : A . . . . . . GA T A A . T . CA GC T . . . . TT . T A . A . . T . CCG TA CCTT . . . . . GA A T C T C . . CAT . . . T . A G A G T . AA . A C . A . A TC . A . . T .
blockSeqs : A . . . . . . T T A A . A . TA GT A . . . . TT . T A . A . . T . GTT TA AGTC . . . . . GA A T C T C . . CAA . . . T . A T C T T . CG . C C . T . T AT . . . . C
blockSeqs : A . . . . . . T G A A . T . CA GC T . . . . AC . A G . A . . T . CTG TA ACTA . . . . . GA A T C T T . . CAT . . . A . G T A G A . AA . A T . A . T TC . . . . .
blockSeqs : A . . . . . . T T . . . G . AT GA T . . . . AC . A T . A . . C . TTA CA AGTC . . . . . AA A T C T C . . ATA . . . T . C G C T T . AA . C C . A . A AT . . .
blockSeqs : . . . T T . . . A . CA AA C . . . . TT . A G . A . . C . TTC AC TGTA . . . . . AA A A A A A . . CAG . . . A . A A A A G . CG . T T . A . C A
blockSeqs : . A . . . . . . TC T . . . . TT . T G . A . . T . GG AA ATTC . . . . . GC T C T C T . . TGT . . . G . A C C A G . CA . C C . A . . .
blockSeqs : . . . . . . . GC T . . . . AC . T G . A . . T . AG AA GCT . . . . . AT A T A C A . . CTT . . . A . T A T G T . CG . A A . A
blockSeqs : . . . G . . . . A . T A . A . . C . AG AA GTT . . . . . GA A T A T C . . TAA . . . T . C G C A G . CG . C C .
blockSeqs : . . . . . A . A T . A . . . . AG TA GCT . . . . . AA T T C C T . . TA . . . A . C G . A G . A . C C .
blockSeqs : . . . . T . A G . A . . . . AG AA GTT . . . . . AC A A A A G . . T . . . G . A T . G T . A . C C .
blockSeqs : . . A . A T . T . . . . TC T GAT . . . . . GA A A A C G . . T . . . T . C G . G T .
blockSeqs : . . A . . . . AG T AT . . . . . GA A T C T C . . . . . . T . C
blockSeqs : . AA . . . . . GA . T T T C .
blockSeqs : T . . . .
blockSeqCons :
originalCons : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CGATA--CC-TATGCGNAAA-TTA-T-T-TTACAATGCTTACA--TACTNC-C-A-CATTTA---GATTATTGTTGTACAATTTGGGGAAA-TTGCAAC-TCTGACCT-----ATNTG-----ACAANA-T---AT-T--AAA-A--TTTC-AA-A--A-GNGN-GCTGCNAGACTTATCCTCG-ATAAAG--ACAT-T--GATACA-C--------CNTC---TGAA--GAATTATTTAATGANCTNAAATGGA-TGACGTTC-CCTGAAAGAGTTAAATAT--NAAAA----AGC----TATTC-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
finalCons : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CGATA--CC-TATGCGNAAA-TTA-T-T-TTACAATGCTTACA--TACTNC-C-A-CATTTA---GATTATTGTTGTACAATTTGGGGAAA-TTGCAAC-TCTGACCT-----ATNTG-----ACAANA-T---AT-T--AAA-A--TTTC-AA-A--A-GNGN-GCTGCNAGACTTATCCTCG-ATAAAG--ACAT-T--GATACA-C--------CNTC---TGAA--GAATTATTTAATGANCTNAAATGGA-TGACGTTC-CCTGAAAGAGTTAAATAT--NAAAA----AGC----TATTC-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
Alignments
lowQualScore : 11 11 11 22222222 1111111111 1111 11 1
lowQualScore : 44 55 2 6 444 88 2 0 77 2 4 2 444 9 66 888 22 1 2 2 3 1 66 22 1 1 1 444 333 0 1 11 66666 00000000 444 4444444444 1 22 1 1 22 111 33 1 2 2 1 1 22 4444 77 3 66666666 1 555 1 333 4 1 1 1 55 2 2 0 555 4444 99999 2 55 2222 33 77 00 44 2 3 8
lowQualScore : .. .. . . ... .. . . .. . . . ... . .. ... .. . . . . . .. .. . . . ... ... . . .. ..... ........ ... .......... . .. . . .. ... .. . . . . . .. .... .. . ........ . ... . ... . . . . .. . . . ... .... ..... . .. .... .. .. .. .. . . .
lowQualScore : 11 77 9 1 777 33 7 9 22 1 1 5 111 3 11 222 55 7 0 0 8 9 88 55 5 0 8 000 000 5 9 66 44444 77777777 000 0000000000 7 44 7 7 44 888 33 0 4 2 9 7 55 3333 55 6 66666666 0 000 6 111 9 0 0 9 44 0 0 9 888 2222 99999 5 55 9999 99 33 77 22 1 6 2
consensus : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CGATA--CC-TATGCGNAAA-TTA-T-T-TTACAATGCTTACA--TACTNC-C-A-CATTTA---GATTATTGTTGTACAATTTGGGGAAA-TTGCAAC-TCTGACCT-----ATNTG-----ACAANA-T---AT-T--AAA-A--TTTC-AA-A--A-GNGN-GCTGCNAGACTTATCCTCG-ATAAAG--ACAT-T--GATACA-C--------CNTC---TGAA--GAATTATTTAATGANCTNAAATGGA-TGACGTTC-CCTGAAAGAGTTAAATAT--NAAAA----AGC----TATTC-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
Reference ( family-728 ) : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CGATA--CC-TATGCGNAAA-TTA-T-T-TTACAATGCTTACA--TACTNC-C-A-CATTTA---GATTATTGTTGTACAATTTGGGGAAA-TTGCAAC-TCTGACCT-----ATNTG-----ACAANA-T---AT-T--AAA-A--TTTC-AA-A--A-GNGN-GCTGCNAGACTTATCCTCG-ATAAAG--ACAT-T--GATACA-C--------CNTC---TGAA--GAATTATTTAATGANCTNAAATGGA-TGACGTTC-CCTGAAAGAGTTAAATAT--NAAAA----AGC----TATTC-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
gi|132520 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCCGAATAAAATACTATTTAT---CAATA--CC-TATTAGGAAA-TTA-T-T-TTACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AT-T--AAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TGAA--ACATTATTTAATGATCTAAAATGGA-TGAAATTC-CATGAAAGAGTAGAATAT--AAAAA----GGC----TATTT-TA-ATGTTCA-AAAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAATAAATTTT
gi|132521 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAATATAATACTATTTAT---CAATA--CC-TATTAGGAAA-TTA-T-T-TTACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AT-T--AAA-A--TTTC-AA-A--A-ATGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TGAA--ACATTATTTAATAATCTAAAATGGA-TGAAATTC-CATGAAAGAGTAGAGTAC--AAAAA----GGC----TATTT-TA-ATGTTCA-AGAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
gi|132522 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCAGAACAAAATACTATTTAT---CAATA--CC-CATTTGGAAA-TTA-T-T-TTACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACG-T---AT-T--TAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACTTATCCTTG-ATAAAG--ACAT-T--GATACA-C--------CATC---TGAA--ACATTATTTAATGATCTAAAATGGA-TAAAATTC-CATGAAAGAGTAGAATAT--AAAAA----GGC----TATTT-TA-ATGTTCA-AGAT--CA-TC--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT
gi|132523 : AAAAATGCAATTC-CTTA--T----AC---TT--ACT-TGGCAGCATAAAATACTATTTAT---CAATA--CC-TATGAGGAAT-TTA-T-T-T-ACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCCG-----GCAAAA-T---AT-T--GAA-A--TTTC-AA-A--A-ACGT-GCTGCAAGACT-ATCCTTG-A-AAAG--ACAT-T--GATACA-C--------CATC---TGAA--TCATTATTTAATGATCTAAAATAGA-TGAAATTC-CATATAAGAGTAGAATAT--AAAAA----GGC----TATTT-TA-ATGTTCA-ACAT--CA-TC--AACAAC--TTGGCCCCAGAGTTTTTGCAAAAT-AATTTT
gi|132524 : AAAAATGCAATTC-CTTA--TTA-TAC---TT--ACT-TGGCCGAATAAAATACTATTTAT---C-----------------AA-TTA-T-T-TTACAATTCTTACA--TACTTC-C-T-CATCTA---GACTATAGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCTG-----ACAACA-T---AC-T--AAA-A--TTTC-AA-A--A-ATGT-GCTGCAAGACTTGTCCTTG-ATAAAG--ACAT-T--GATACA-C--------CGTC---TGAA--ACATTATTTAATGATCTAAAATGGA-TGA
gi|132525 : AAAAATGCAATTC-CTAA--TTA-TAC---TT--ACT-TGGCAGAATAAAATACTATTTAT---CAATA--CC-TATTAGGAAA-TAA-C-T-TTATAATTCTTACA--AACTTC-C-T-CATCTA---GACTATTGCTGTACAATATGGGGAAA-TTGCAAC-TCTGACCT-----ATCCG-----ACAACA-T---AT-T--GAA-A--TTTC-AA-A--A-ATGT-GCTGCAAAATTTATCCTTG-ATAAAG--ACAT-C--AGTACA-C--------CATC---TGA
gi|132526 : AAAAATGTAATTC-TCTG--TTA-TAC---TT--TTTATATCGCATTAAAA-ACT--TCAT---TGACATCCC-TACACGCAAA-CTC-T-T-TTTTAATGCATATA--TTCTGC-C-A-CATTTA---GATTATTGTTGTACCATTTGGGGCAA-CTGCAAT-TCAGAACT------TTTGA----ACAATC-T---CC-T--AAA-A--TTCC-AA-A--A-ACGT-GCAGCGAGAATAATACTCA-ACAAGG--ACTT-T--GAT-TATC--------CATC---TGCA--GAATTATTTGATCAACTTGGCTGAA-TGACATTC-CAGGAAAGATTCCAATAT--AAAAA----GGC----TACTC-TT-GTTTTC--AAAT--C--TCTGAACAAT--CTGGCACCAGCTTATCTCCAGAACAAGTT
gi|132527 : AAAAATGTAATTC-TCTG--TTA-TACCTTTT--ATA-TCGCA---TTAAATACT--TCAT---TGACATCCC-TACACGCAAG-CTC-T-G-TTTTAATGCATATA--TACTGC-C-A-CATTTA---TATTATTGTTGTACAATTTGGGGCAA-CTGCAAT-TCAGAACT------TTTGA----ACAATC-T---CC-T--TAA-A--TTACAAA-A--A-ACGT-GCAGCGAGAATAATTCTCA-ACAAGG--ACTT-T--GA-ATATC--------TATC---TACA--GAATTATTTGATCAACTTGGCTGGA-TGACATTC-CAGGAAAAAATCCAATAT--AAAAA----GGC----TACTC-T---TGTTTACAAAT--C--TCTGAACAAT--CTGGCACCAGCTTATCTCTAGAACAAGTTT
gi|132528 : AAAAGTGCAATCCACTCA--CTGCTGT---TTTAAAT-AAACAGAATTAAACCATATTTAT---CAATT--AA-TGTGCGTAAA-TTAAT-T-TTAT--TGCTTACG--TCTTGC-C-A-CATCTG---GACTCCTGTTTT-TAACATGAGGAAT-TTGTTCT-TCTGATCTC----ATG-G-----ATTCTA-T---AG-T--CAG-A--TTCC-AA-A--A-GAGA-TCTGCTTGAATTATGTTTGGACAAAG--ATTA-T--GACACA-C--------CGTT---CAAT--GAATTATTTTACGAATTTAAATTGA-TGGAATTC-CCTGATAGAGTTAAATAT--CAAAA----AGC----
gi|132529 : AGAAATGTAATTC-ATTACTTTA-T-C---TTCTATC-TCGCAT--CAAAATATT-TTT-T---CTGTA--CT-AATGCGTAAG-TTG-T-T-TTTTAATGCTTACA--TTTTAC-C-A-CATTTA---GATTACTGTTATGTAATTTAGGGAAA-TTGTAA----TAATTC-----ACGTGTAGATACAAT--T---GC-T---AG-G--TTTT-AA-A--A-GAGA-GCTGCTAGACTAATTCTCG-ATAAAA--ATA--C--AATAAT-C--------CTTC---TACT--GAATTA-TTACAGAGCTTAAATGGA-TGTCGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AACAG--TATT
gi|132530 : AGAAATGTTATTC-ATTACTTTA-T-C---TTCTATC-TCGCAT--CAAAGTATTTCTT-T---CTGTA--CC-AATGCGTAAG-TTG-T-T-TTTTA-TGCTTACA--TTTTAC-C-A-CATTTA---GATTACTGTTGTGTAATTCATAGAAA-TTGTAATATTTCACTT-----GTA-G-----ATAAAATT---GT-T---AG-G--TTTC-AA-A--A-GAGA-GCTGCTAGACTTATTATCG-ATTA----ACAT-TACGATACT-C--------CTTC---TAAT--GAA-TATTCACAGAGCTGAAATGGA-TGACGTTT-CCTGAAAGAGTTAAATTT--CTAAA----AGC----t
gi|132531 : AGAAATGTAATTC-ATTACTTTA-T-C---TTCTATC-TCGCAT--CAAAATATT-TTT-T---CTGTA--CT-AATGCGTAAG-TTG-T-T-TTTTAATGCTTACA--TTTTAC-C-A-CATTTA---GATTACTGTTATGTAATTTAGGTAAA-TTGTAA----TAATTC-----ACGTGTAGATACAAT--T---GC-T---AG-G--TTTT-AA-A--A-GAGA-GCTGCTAGACTAATTCTCG-ATAAAAATACAA-T--AATCCT-T--------CTAC---TGAA--TAATCA--CA--GAGCTTAAATGGA-TGTCGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AGC----agtacttataa
gi|132532 : AAAGTGCATTTT-ATTA--TTG-TAT---AT--ACT-AGGCAGAATAAAATAGTATCTAT---CAATA--C---ATGTTATGA-TTA-TATGTTACAATATTTA-A--TATAG----A-CATTTA---AA
gi|132532 : T-----ATGTT-----ACAATA-TTTAATAT--AGACA--TTTA-AA-A--A-AAGGTGCTTCTAGACGTATTCTTT-ATAGAT--GCAT-T--GATTCA-C--------AATT---TGGA--TCATTATTTAATAGTACTAAATGGT-TGAAATT--CATGAACGGGTAGAATATAAAAAAA----AGT----TAATC-TA-ATGT--A-AAATAGCA-TT--AACATA--TTATT-----AGTATTTGCTACATAACTTTaaaaggtgcttctagacgtattctttatagatgcattgattcacaatttggatcattatttaatagtactaaatggttgaaattcatgaacgggtagaatataaaaaaaagttaatctaatgtaaaatagcattaacatattattagtatttgctacataacttt
gi|132533 : aaagtgcattttattattgtatatactaggcagaataaaatagtatctatcaatacatgttatgattaAAATGTAATTC-ATTACTTTG-T-C---TTCTACC-TAGCAT--CAAAGTATAACTT-T---CTGTA--CC-AATGCGTAAG-TTG-T-T-TTA--ATGCTTACATTTAATTC-----CATTTA---GATAACTGTTGTGTTATTTGGGGAAA-TTGTAATGTTTCACTT-----GTA-G-----ATAAAATT---GT-T---AG-G--TTTC-AA-A--ACGAGA-GCTGTTAGACTTAATCTCG-ATAAAA--A-ATAC--GACACT-C--------CTTC---CACA--GAATTATTCACAGAGTTAAAAT-GA-TAACGTTT-TCTGAAAAAGTTAAATTTC-AAAAA----AGC----AGTAC-TT-ATGTATA-AA
gi|132534 : C---TT---CT-TAAAAGAATATCATATTATTTAA---C-ATA--TGATATGAATGTA-TTG-T-T-TTACAATGCCTACA--TAATGT-CAA-CATTT----GATTATTGTTGTATTGTTTTGGGAAA-AGGTAA------ACAT-----ATACAAAAT-ACAATA-T---AT-----AA-A--TCTC-AG-A--A-AAGA-GCAGCAAGAATAATACTAA-ATAAccat
gi|132535 : ATCTA---GATTATTGCTGCACAATA-GGGGTAA------AC-TCTGACCT-----ATCTG-----ACAACA-TG--AT--------A--TTTC-AA-A--A-GCGT-GCTGCCAGATTTATCTTTG-ATATAG--ACAG-T--GATGCA-C--------CAGC---TTAA--ACAATATTTAATGATCGTAAACGGA-CGCAATTC-CATGAAAGAG-TAGACAA--TAAAA----AAC----TATTG-GA-ATGT-------------TC--AACAGC--TTGGCCCTGGAGTATTTGCAAAAT-AATTTT
gi|132536 : gcaaaacaacttttaatacaacatttaaaacaactgcattaaaatgtatcaatatatcctaagcatgtacctaGAATTAAATCATATTTAT---CGATT--CA-TGTAAGCAAA-TTA-T-A-TGTTAATGGTTACG--TTTTGT-C-A-CAATTG---GATTATTGTTGTTCAATTTGGGGAAA-TTATTCC-TTTGATCT-----ATA-G-----TCAAAC-T---A-----AAA-A-------AA-A--A-AT----CTGCTACAATTAT-------TA----------T--GACACA-C--------CGTCCATTGAA--CAATT-TTC--CGAAATGAAATGGAGTGA-ATTT-CCTGATAAAGTTGAATAT--CAACA----AGC----AATAA-TA-ATGTACA-AAA
gi|132537 : ATAAAATA-TATTTATAAGCAATT--C---ATTCATAAAATTA-TAT-TTA-AATGCTTACA--TTTTGC-C-A-CATTTG---GACTATTGCTATACAATTT
gi|132537 : CTGCTACAATTATCTTAT-AGAAAA--ATGT-T--ACCACA-C--------CATCC--TGTA--AACTTATATC-TGAATTGAGATGGA-TGGAATTT-CTTGGTGGGGTTAAATGT--TAAGA----AGC----AATTC-TA-ATGTTTA-AAAT--AA-Tatatctgctacaattatcttatagaaaaatgttaccacaccatcctgtaaacttatatctgaattgagatggatggaatttcttggtggggttaaatgttaagaagcaattctaatgtttaaaataatacgttgatcttcaccagcttatctccgagggtcattt
gi|132538 : ataaaatatatttataagcaattcattcataaaattatatttaaatgcttacattttgccacatttggactattgctatacaatttatatTA--CC-AATGCGTAAG-TTG-T-T-TTTTAATGCTTACA--TTTTAC-C-A-CATTTA---TATTACTGTTGTGTTATTTGGGGAAA-TTGTAATATTTCACTT-----GTA-G-----ATAAAA-TT--GT-T--AGG----TTTC-AA-A--A-GAGA-GCTGCTAGACTTATTCTCG-ATAAAA--A--T-TACGATACT-C--------CTTC---TACT--GAATTATTCACAGAGCTTAAATGGA-TGACGTTT-CCTGAAAGAGTTAAATTT--CAAAA----AGC----AGTAC-TT-ATAT--ATAAGT--CATTT--AATGAC--CAGGCTCCTGCATATCT-CAAAacgttgatcttcaccagcttatctccgagggtcattt
gi|132539 : GGAAA-TTA-T-T-TTACAGTGGTTATA--TACTTC-C-ATTATTTAATTAATTACTGTTGCACAGTTTGGAATAA-CTGCGCT-TAAGATGG-----ATTTA-----ATCGAA-T---AC-T--AAA-A--TTAC-AG-A--A-AAGA-GCAGCAAGAATTATCCTTA-AT
gi|132540 : aAAA-T-A-T-T-TT-TAACACACACA--TACTGC-C-A-CATTTA---GATTATTGTTGCATCATTTTGGGTAA-CTATAAT-TCAG---------ATTTC-----AAAAAA-T---CT-TCAAAA-A--TTTC-AATAATA-ACGT-GCAGCAAGAATAAAACTGA-ACAAGG--ACTT-G--GAT-TA-CTGGGTATTCATC---TGCA--GAATTATTTGATAAAATG-GCTGGG-TGACATTC-AAAGAAAGAATCCATTAT--AAAACTGCTAGCGGTATACTC-TT-GTTTTC--AAAT--CT-TTG-AACAAT--CTGGCACCGG
gi|132541 : -T-TTA-AATGCTTACG----CTTTGC-A-CATTTG---GACTCCTTTTGTTCAATTTGGGTAAG-TTGTTCC-TCTGATCTCAGGAATTC----------TA-T---AG-T--CAA-A--CTTC-GA-A--A-GATA-TCTGCTAGA-TTAACCTGG-ACAAAG--ATAA-T--GACACA-T--------CGTC-----AATTGAACTATTTTCCAAATTGAAATGGA-TGG-ATTCTCCTGATAGAGTTACATAT--CAAAA----TGG----AATAC-TA-ATG-TCA-AAAT--AA-TC--AA
gi|132542 : CTTACA--TATTAC-T-T-CATTTA---GATAACGGTTGTGTTACTTGGGGGAAGTTGTAATGTTTCACTT-----GTA-G-----ATAAAA-T---TG-T--AAG-A--TTTC-AA-A--A-GAGA-GCTGCTAGACTTTTTCTCA-ATAAAA--AAATAC--GGTATT-C--------CTTC---TACA--TAATTATTCATTAAGCTTAAACTGA-TGACGTTT-CCTGAAAGGGTTAAATTT--CTAAA----GGCAG--TACTCATGTATATTTA-AGAG--CA---------------GGCCCCTGCATATTT-CAAA
gi|132543 : ---AT-T--CAA-AGGTTTC-AA-G--A-GAAA-GCTGCTAGATTTATTCTCG-ATAAAA--A--T-TACGATACT-C--------CTTC---TACA--GAATTATTCACTAAGTTTAAATGGC-TGACGTTT-TCTGAAAGAGTTAAATTT--CAAAA----AGC----AGTAC-TC-ATGT--ATAAAT--CATTT--AATGACCATTGGCTCC
gi|132544 : C--AACAAC--TTGGCCCCAGAGTATTTGCAAAAT-AATTTT