lowQualScore : 11111 1111111111111 11111111111 11111111111 1 1 11111
lowQualScore : 2 00000 0 6666666666666 22 55555555555 55555555555 3 6 1 5 8 55555 22 77777777
lowQualScore : . ..... . ............. .. ........... ........... . . . . . ..... .. ........
lowQualScore : 7 00000 4 3333333333333 44 88888888888 88888888888 7 4 6 6 4 44444 22 99999999
consensus : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTGT----G--------AAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTCCTGTAAATGG-N--NATT--TTCACCAGGGTCATC-G------AATATTCAGT
Reference ( gi|144785 ) : TTGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTGT----C--------AAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGATTCCTGGATCACCACGTTACCAGTTTACAAA-ATTTCCTGTAAATGG-C--AATT--TTCACCAGGGTCATC-G------AATATTCAGT
gi|144786 : TTGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAATTTTGTTTGT----C--------AAGCTTTCATTTA--GGTTGTTCATGTTGGTAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGATTCCTGGACCACCACGTTACCAGTTTACAAA-ATTCCCTGTAAATGG-C--GATT--TTCACCAAGGTCATC-G------AATATTCAGT
gi|144787 : TCGATCAATACTCTATCAA-----AAAGTCTAGCGTCAGAATATGAAGGTTTGTTTGT----C--------AAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAAGTGTGGAAAGGGATCTTGGACCACCACGTTACCAGTTTACAAA-ATTTCCTGTAAATGG-C--AATT--TTCACCAGGGTCATC-G------AATATTCAGT
gi|144788 : TCGATCAATACTCCATCAA-----AAAGTAAAACGTCAGAATATGAAGGTTTGTTCGT----C--------AAGCTTTCATATA--GCTTGTTCATCTTGACAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGCTTACAAA-ATTCCCTGTAAATGG-C--AATT--TCCACCAGGGTCATC-A------AATATTCAAT
gi|144789 : TCGATCAATACTCTATCAA-----AAAGTCAAACATCAGAATATGAAGGTTTGTTTGT----C--------AAGCTTTAATTTT--GATTGTTCATGTTGATAACTTTTATGTTGATTTT-----------ATGTGGATATGTGGAAAGGATTCCTGGACCACCACGTTACCAGTTTACAAA-ATTCCCTGTAAATGG-C--AATT--TTCACCAGGGTCATC-G------GATATTCAGT
gi|144790 : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTT-GT----C--------AAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTCT-----------ATGTTGAGATGTGGAAAGGAATCCTGGACCACCATGTTACCAGTTTACAAA-ATTCCCTGTAAATGG-C--AATT--TTCACCAGGGTCACA-G------GGTTTTCA
gi|144791 : TCGATCAATAATCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTGT----C--------AAGTTTTCATATA--GGTTATTCATTTTGATAAC-----------TTTTATGTTGATTTTATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTTCTAGTTTACAAA-ATTCCCTGTAAATGG-C--AATT--TTCACCAGGGTCATC-G------AATATTCTGT
gi|144792 : TCGATCAATAGTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGGTTGT----A--------AAGCTTTCATATA--CGTAGTTCATGTTGATAAC-----------TTTTATGTTAATTTTATGTGGATATGTGGAAAGGAATCCTTGACCACCACGTTACCAGTTTAAAAT-ATTCCCTGTAAATGG-C--AATT--TTCACCAGGGTCATC-G------AATATTCAGT
gi|144793 : TCGATCAGTACTCTATTAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTGT----G--------AAGCTTTCATATATAGTTTGTTCATGATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTCGACCACCATGTTACCAGTTTACAAA-ATGTCCTG-AAATGGAT--ATTT--TTTACCAGAGTCATC-A------AATATTCAGT
gi|144794 : TTGATCAATAATCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTGT----C--------AAGCTTTCATATA--GGTAATTCATGTTGATAACTTTTATGTTAATTTT-----------ATGTGGATATGTGGAAAGGAATCCTGGACCACCACATTACAAGTTTACAAA-ATTCCCTGTAAATGG-C--CATT--
gi|144795 : TCAAT--TCTATCGATTTTGGAA---AAACATTAGAATATGAAGGTTTGTTTGT----G--------AAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACATTTCCAGTTTACAAA-ATGTCCTG-AAATGGAT--AA-T--TTCACCAGAGTCGTC-A------AATATTCAGT
gi|144796 : AAACATCAGAATATGAAGGTTTGTTTGT----G--------AAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGTAAAGGAATCCTGGACCACCACGTAACCAGTTAACAAA-ATGTCCTG-AAATGG-T--TATT--TTCACCAGGGTCATC-A------AATATTCAGT
gi|144797 : AAACATCAGAATATGAAGGTTTGTTTGT----G--------AAGCTTTCATATA--GGTTGTTCATGTTGATAAC------------TTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCAAGTTACCAGTTAACAAA-ATGTCCTG-AAATGG-A--TATT--TTCACCAGGGTCATC-A------AATATTCAGT
gi|144798 : AAACATCAGAATATGGGGGTTTGTTTGT----G--------AAGCTTTCATATA--GGTTGCTCATGATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCTGTTTACAAA-ATGTCCTG-AAATGG-A--TATT--TTCACCAGGGTCATC-A------AATATTCAGT
gi|144799 : AAACATCAGAATATGAAGGTTTGTTTGT----G--------AAGCTTTCATATA--GGTT---CATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGCAAGGAATCATAGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-A--TATT--TTCACCAGGGTCATC-A------AATATTCAGT
gi|144800 : AAACATCAGAATATGGAGGTTTGTTTGT----G--------AAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGTACCACCAAGTTACCAG-TTACAAA-ATGTCCTG-AAATGG-A--TATT--TTCACCAGGGTCATC-A------AATA-TCAGT
gi|144801 : AAACATCAGAATATGAAGGTTTGTTTTT----G--------AAACTTTCATATA--GAATGTTCATGTTGATAAC------------TTT-----------ATGTGGAGATGTGGAAATGAATCCTGGACCACCACCTTACCAGTTTACAAA-ATGTCCTG-AAATGG-A--TATT--TTCACCAGGGTCATC-A------AATATTCAGT
gi|144803 : AAACATCAGAATATGAAG--------------------------CTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-A--TATT--TTCGCCAGGGTCATC-A------AATATTCAGT
gi|144802 : AAACATCAGAATATGAAGGTTTGTTTGTGAAGCTTTTTGTGAAGCTTTCATATA--GGCTACTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTTCTG-AAATGG-A--TATT--TTCATCAGGGTCATC-AAAATTTAATATTCAGT
gi|144804 : AAACATCAGAATAGGGAGGTTTGTTTGT----G--------AAGCTTTCATATA--GGTTGTTCATCATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCAGTACCACCATGTTACCAG-TTACAAA-ATATCCTG-AAATGG-A--TTTT--TTCACCAGGGTCATC-A------AATATTCAGT
gi|144805 : AAACATCAGAATATGAAGGTTTGTTTGT----G--------AAACTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTT------------CTG-AAATTG-A--TATT--TTCATCGGGGTCATCAA------AATATTCAAT
gi|144806 : AAACATCAGAATATAAAGGTTTGGGTGT----A--------AAGCTTTCATATA--GGTTGTTCATGTTGATAAC------------TTT-----------ATTTGGAGATGTGGAA-----------------ACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-A--TATT--TTCACCAGGGTCATC-A------AATATTCAGT
gi|144807 : AAACATCAGAATATGTAAGTTTGTTTGT----G--------AAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTTGACCACCGCGTTACCAGTTTACCAGTATATCAT-TAAATGA-CATAATCCATTCATCA
gi|144808 : AACATCAGAATATGAAGGTTTGTTTGT----G--------AAGCTTTCATATA--GATTGTTCATGTTGATAAC------------TTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-A--TATT--TTCACAAGGGTCATC-A------AATATTCAGT
gi|144809 : GTTGATAAC-----------TTTT-----------ATGTGTAGATGTGGAAAGGATTCCTGGACCACCATGTTACCACTTTACAAA-ATTCCCTGTAAATGG-C--AATT--TTCACCAGGGTCATC-G------AATAATCAGT
gi|144810 : TTATCAGTTTACAAA-ATTTCCTGTAAATGG-A--TATT--TTCAGCAGAGTCATC-A------AATATTCAGT
Alignments
lowQualScore : 22222222222 1
lowQualScore : 99999 888888888888 0 22 77777777777 22222222222 1 2 7 22 1 77777777
lowQualScore : ..... ............ . .. ........... ........... . . . .. . ........
lowQualScore : 11111 555555555555 7 33 66666666666 88888888888 5 8 4 00 6 11111111
consensus : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATNTCCTGTAAATGGATA-TTTTCACCAGGGTCATC-G------AATATTCAGT
Reference ( family-721 ) : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTCCTGTAAATGGNNA-TTTTCACCAGGGTCATC-G------AATATTCAGT
gi|144785 : TTGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGATTCCTGGATCACCACGTTACCAGTTTACAAA-ATTTCCTGTAAATGGCAA-TTTTCACCAGGGTCATC-G------AATATTCAGT
gi|144786 : TTGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAATTTTGTTTG------------TCAAGCTTTCATTTA--GGTTGTTCATGTTGGTAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGATTCCTGGACCACCACGTTACCAGTTTACAAA-ATTCCCTGTAAATGGCGA-TTTTCACCAAGGTCATC-G------AATATTCAGT
gi|144787 : TCGATCAATACTCTATCAA-----AAAGTCTAGCGTCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAAGTGTGGAAAGGGATCTTGGACCACCACGTTACCAGTTTACAAA-ATTTCCTGTAAATGGCAA-TTTTCACCAGGGTCATC-G------AATATTCAGT
gi|144788 : TCGATCAATACTCCATCAA-----AAAGTAAAACGTCAGAATATGAAGGTTTGTTCG------------TCAAGCTTTCATATA--GCTTGTTCATCTTGACAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGCTTACAAA-ATTCCCTGTAAATGGCAA-TTTCCACCAGGGTCATC-A------AATATTCAAT
gi|144789 : TCGATCAATACTCTATCAA-----AAAGTCAAACATCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTAATTTT--GATTGTTCATGTTGATAAC-----------TTTTATGTTGATTTTATGTGGATATGTGGAAAGGATTCCTGGACCACCACGTTACCAGTTTACAAA-ATTCCCTGTAAATGGCAA-TTTTCACCAGGGTCATC-G------GATATTCAGT
gi|144790 : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTT-G------------TCAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTCT-----------ATGTTGAGATGTGGAAAGGAATCCTGGACCACCATGTTACCAGTTTACAAA-ATTCCCTGTAAATGGCAA-TTTTCACCAGGGTCACA-G------GGTTTTCA
gi|144791 : TCGATCAATAATCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TCAAGTTTTCATATA--GGTTATTCATTTTGATAAC-----------TTTTATGTTGATTTTATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTTCTAGTTTACAAA-ATTCCCTGTAAATGGCAA-TTTTCACCAGGGTCATC-G------AATATTCTGT
gi|144792 : TCGATCAATAGTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGGTTG------------TAAAGCTTTCATATA--CGTAGTTCATGTTGATAAC-----------TTTTATGTTAATTTTATGTGGATATGTGGAAAGGAATCCTTGACCACCACGTTACCAGTTTAAAAT-ATTCCCTGTAAATGGCAA-TTTTCACCAGGGTCATC-G------AATATTCAGT
gi|144793 : TCGATCAGTACTCTATTAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATATAGTTTGTTCATGATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTCGACCACCATGTTACCAGTTTACAAA-ATGTCCTG-AAATGGATATTTTTTACCAGAGTCATC-A------AATATTCAGT
gi|144794 : TTGATCAATAATCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTCATATA--GGTAATTCATGTTGATAACTTTTATGTTAATTTT-----------ATGTGGATATGTGGAAAGGAATCCTGGACCACCACATTACAAGTTTACAAA-ATTCCCTGTAAATGGCCA-TT
gi|144795 : TCAAT--TCTATCGATTTTGGAA---AAACATTAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACATTTCCAGTTTACAAA-ATGTCCTG-AAATGGATA-ATTTCACCAGAGTCGTC-A------AATATTCAGT
gi|144796 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGTAAAGGAATCCTGGACCACCACGTAACCAGTTAACAAA-ATGTCCTG-AAATGGTTA-TTTTCACCAGGGTCATC-A------AATATTCAGT
gi|144797 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC------------TTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCAAGTTACCAGTTAACAAA-ATGTCCTG-AAATGGATA-TTTTCACCAGGGTCATC-A------AATATTCAGT
gi|144798 : AAACATCAGAATATGGGGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGCTCATGATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCTGTTTACAAA-ATGTCCTG-AAATGGATA-TTTTCACCAGGGTCATC-A------AATATTCAGT
gi|144799 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTT---CATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGCAAGGAATCATAGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGGATA-TTTTCACCAGGGTCATC-A------AATATTCAGT
gi|144800 : AAACATCAGAATATGGAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGTACCACCAAGTTACCAG-TTACAAA-ATGTCCTG-AAATGGATA-TTTTCACCAGGGTCATC-A------AATA-TCAGT
gi|144801 : AAACATCAGAATATGAAGGTTTGTTTT------------TGAAACTTTCATATA--GAATGTTCATGTTGATAAC-----------TTT------------ATGTGGAGATGTGGAAATGAATCCTGGACCACCACCTTACCAGTTTACAAA-ATGTCCTG-AAATGGATA-TTTTCACCAGGGTCATC-A------AATATTCAGT
gi|144802 : AAACATCAGAATATGAAGGTTTGTTTGTGAAGCTTTTTGTGAAGCTTTCATATA--GGCTACTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTTCTG-AAATGGATA-TTTTCATCAGGGTCATC-AAAATTTAATATTCAGT
gi|144803 : AAACATCAGAATATGAA--------------------------GCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGGATA-TTTTCGCCAGGGTCATC-A------AATATTCAGT
gi|144804 : AAACATCAGAATAGGGAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATCATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCAGTACCACCATGTTACCAG-TTACAAA-ATATCCTG-AAATGGATT-TTTTCACCAGGGTCATC-A------AATATTCAGT
gi|144805 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAACTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTT------------CTG-AAATTGATA-TTTTCATCGGGGTCATCAA------AATATTCAAT
gi|144806 : AAACATCAGAATATAAAGGTTTGGGTG------------TAAAGCTTTCATATA--GGTTGTTCATGTTGATAAC------------TTT-----------ATTTGGAGATGTGGAA-----------------ACGTTACCAGTTTACAAA-ATGTCCTG-AAATGGATA-TTTTCACCAGGGTCATC-A------AATATTCAGT
gi|144807 : AAACATCAGAATATGTAAGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTTGACCACCGCGTTACCAGTTTACCAGTATATCAT-TAAATG
gi|144808 : AACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GATTGTTCATGTTGATAAC-----------TTT------------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGGATA-TTTTCACAAGGGTCATC-A------AATATTCAGTacataatccattcatca
gi|144809 : GTTGATAAC-----------TTTT-----------ATGTGTAGATGTGGAAAGGATTCCTGGACCACCATGTTACCACTTTACAAA-ATTCCCTGTAAATGGCAA-TTTTCACCAGGGTCATC-G------AATAATCAGT
gi|144810 : TTATCAGTTTACAAA-ATTTCCTGTAAATGGATA-TTTTCAGCAGAGTCATC-A------AATATTCAGT
Alignments
lowQualScore : 22222222222 1
lowQualScore : 99999 888888888888 0 22 77777777777 22222222222 1 1 7 333 1 222 77777777
lowQualScore : ..... ............ . .. ........... ........... . . . ... . ... ........
lowQualScore : 11111 555555555555 7 33 66666666666 88888888888 5 5 4 333 5 777 11111111
consensus : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATNTCCTGTAAATGG-ATA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
Reference ( family-721 ) : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATNTCCTGTAAATGG-ATA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
gi|144785 : TTGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGATTCCTGGATCACCACGTTACCAGTTTACAAA-ATTTCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
gi|144786 : TTGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAATTTTGTTTG------------TCAAGCTTTCATTTA--GGTTGTTCATGTTGGTAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGATTCCTGGACCACCACGTTACCAGTTTACAAA-ATTCCCTGTAAATGG-CGA-TT---TTCACCAAGGTCATC-G------AATATTCAGT
gi|144787 : TCGATCAATACTCTATCAA-----AAAGTCTAGCGTCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAAGTGTGGAAAGGGATCTTGGACCACCACGTTACCAGTTTACAAA-ATTTCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
gi|144788 : TCGATCAATACTCCATCAA-----AAAGTAAAACGTCAGAATATGAAGGTTTGTTCG------------TCAAGCTTTCATATA--GCTTGTTCATCTTGACAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGCTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TCCACCAGGGTCATC-A------AATATTCAAT
gi|144789 : TCGATCAATACTCTATCAA-----AAAGTCAAACATCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTAATTTT--GATTGTTCATGTTGATAAC-----------TTTTATGTTGATTTTATGTGGATATGTGGAAAGGATTCCTGGACCACCACGTTACCAGTTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------GATATTCAGT
gi|144790 : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTT-G------------TCAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTCT-----------ATGTTGAGATGTGGAAAGGAATCCTGGACCACCATGTTACCAGTTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCACA-G------GGTTTTCA
gi|144791 : TCGATCAATAATCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TCAAGTTTTCATATA--GGTTATTCATTTTGATAAC-----------TTTTATGTTGATTTTATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTTCTAGTTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATATTCTGT
gi|144792 : TCGATCAATAGTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGGTTG------------TAAAGCTTTCATATA--CGTAGTTCATGTTGATAAC-----------TTTTATGTTAATTTTATGTGGATATGTGGAAAGGAATCCTTGACCACCACGTTACCAGTTTAAAAT-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
gi|144793 : TCGATCAGTACTCTATTAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATATAGTTTGTTCATGATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTCGACCACCATGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATATTT---TTTACCAGAGTCATC-A------AATATTCAGT
gi|144794 : TTGATCAATAATCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTCATATA--GGTAATTCATGTTGATAACTTTTATGTTAATTTT-----------ATGTGGATATGTGGAAAGGAATCCTGGACCACCACATTACAAGTTTACAAA-ATTCCCTGTAAATGG-CCA-TT---
gi|144795 : TCAAT--TCTATCGATTTTGGAA---AAACATTAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACATTTCCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-AT---TTCACCAGAGTCGTC-A------AATATTCAGT
gi|144796 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGTAAAGGAATCCTGGACCACCACGTAACCAGTTAACAAA-ATGTCCTG-AAATGG-TTA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144797 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC------------TTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCAAGTTACCAGTTAACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144798 : AAACATCAGAATATGGGGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGCTCATGATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCTGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144799 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTT---CATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGCAAGGAATCATAGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144800 : AAACATCAGAATATGGAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGTACCACCAAGTTACCAG-TTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATA-TCAGT
gi|144801 : AAACATCAGAATATGAAGGTTTGTTTT------------TGAAACTTTCATATA--GAATGTTCATGTTGATAAC-----------TTT------------ATGTGGAGATGTGGAAATGAATCCTGGACCACCACCTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144802 : AAACATCAGAATATGAAGGTTTGTTTGTGAAGCTTTTTGTGAAGCTTTCATATA--GGCTACTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTTCTG-AAATGG-ATA-TT---TTCATCAGGGTCATC-AAAATTTAATATTCAGT
gi|144803 : AAACATCAGAATATGAA--------------------------GCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCGCCAGGGTCATC-A------AATATTCAGT
gi|144804 : AAACATCAGAATAGGGAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATCATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCAGTACCACCATGTTACCAG-TTACAAA-ATATCCTG-AAATGG-ATT-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144805 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAACTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTT------------CTG-AAATTG-ATA-TT---TTCATCGGGGTCATCAA------AATATTCAAT
gi|144806 : AAACATCAGAATATAAAGGTTTGGGTG------------TAAAGCTTTCATATA--GGTTGTTCATGTTGATAAC------------TTT-----------ATTTGGAGATGTGGAA-----------------ACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144807 : AAACATCAGAATATGTAAGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTTGACCACCGCGTTACCAGTTTACCAGTATATCAT-TAAATGACATA-ATCCATTCATCA
gi|144808 : AACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GATTGTTCATGTTGATAAC-----------TTT------------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACAAGGGTCATC-A------AATATTCAGT
gi|144809 : GTTGATAAC-----------TTTT-----------ATGTGTAGATGTGGAAAGGATTCCTGGACCACCATGTTACCACTTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATAATCAGT
gi|144810 : TTATCAGTTTACAAA-ATTTCCTGTAAATGG-ATA-TT---TTCAGCAGAGTCATC-A------AATATTCAGT
Alignments
lowQualScore : 22222222222 1
lowQualScore : 99999 888888888888 0 22 77777777777 22222222222 1 1 7 333 1 222 77777777
lowQualScore : ..... ............ . .. ........... ........... . . . ... . ... ........
lowQualScore : 11111 555555555555 7 33 66666666666 88888888888 5 5 4 333 5 777 11111111
consensus : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATNTCCTGTAAATGG-ATA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
Reference ( family-721 ) : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATNTCCTGTAAATGG-ATA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
gi|144785 : TTGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGATTCCTGGATCACCACGTTACCAGTTTACAAA-ATTTCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
gi|144786 : TTGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAATTTTGTTTG------------TCAAGCTTTCATTTA--GGTTGTTCATGTTGGTAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGATTCCTGGACCACCACGTTACCAGTTTACAAA-ATTCCCTGTAAATGG-CGA-TT---TTCACCAAGGTCATC-G------AATATTCAGT
gi|144787 : TCGATCAATACTCTATCAA-----AAAGTCTAGCGTCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAAGTGTGGAAAGGGATCTTGGACCACCACGTTACCAGTTTACAAA-ATTTCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
gi|144788 : TCGATCAATACTCCATCAA-----AAAGTAAAACGTCAGAATATGAAGGTTTGTTCG------------TCAAGCTTTCATATA--GCTTGTTCATCTTGACAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGCTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TCCACCAGGGTCATC-A------AATATTCAAT
gi|144789 : TCGATCAATACTCTATCAA-----AAAGTCAAACATCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTAATTTT--GATTGTTCATGTTGATAAC-----------TTTTATGTTGATTTTATGTGGATATGTGGAAAGGATTCCTGGACCACCACGTTACCAGTTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------GATATTCAGT
gi|144790 : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTT-G------------TCAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTCT-----------ATGTTGAGATGTGGAAAGGAATCCTGGACCACCATGTTACCAGTTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCACA-G------GGTTTTCA
gi|144791 : TCGATCAATAATCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TCAAGTTTTCATATA--GGTTATTCATTTTGATAAC-----------TTTTATGTTGATTTTATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTTCTAGTTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATATTCTGT
gi|144792 : TCGATCAATAGTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGGTTG------------TAAAGCTTTCATATA--CGTAGTTCATGTTGATAAC-----------TTTTATGTTAATTTTATGTGGATATGTGGAAAGGAATCCTTGACCACCACGTTACCAGTTTAAAAT-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
gi|144793 : TCGATCAGTACTCTATTAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATATAGTTTGTTCATGATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTCGACCACCATGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATATTT---TTTACCAGAGTCATC-A------AATATTCAGT
gi|144794 : TTGATCAATAATCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTCATATA--GGTAATTCATGTTGATAACTTTTATGTTAATTTT-----------ATGTGGATATGTGGAAAGGAATCCTGGACCACCACATTACAAGTTTACAAA-ATTCCCTGTAAATGG-CCA-TT---
gi|144795 : TCAAT--TCTATCGATTTTGGAA---AAACATTAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACATTTCCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-AT---TTCACCAGAGTCGTC-A------AATATTCAGT
gi|144796 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGTAAAGGAATCCTGGACCACCACGTAACCAGTTAACAAA-ATGTCCTG-AAATGG-TTA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144797 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC------------TTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCAAGTTACCAGTTAACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144798 : AAACATCAGAATATGGGGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGCTCATGATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCTGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144799 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTT---CATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGCAAGGAATCATAGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144800 : AAACATCAGAATATGGAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGTACCACCAAGTTACCAG-TTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATA-TCAGT
gi|144801 : AAACATCAGAATATGAAGGTTTGTTTT------------TGAAACTTTCATATA--GAATGTTCATGTTGATAAC-----------TTT------------ATGTGGAGATGTGGAAATGAATCCTGGACCACCACCTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144802 : AAACATCAGAATATGAAGGTTTGTTTGTGAAGCTTTTTGTGAAGCTTTCATATA--GGCTACTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTTCTG-AAATGG-ATA-TT---TTCATCAGGGTCATC-AAAATTTAATATTCAGT
gi|144803 : AAACATCAGAATATGAA--------------------------GCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCGCCAGGGTCATC-A------AATATTCAGT
gi|144804 : AAACATCAGAATAGGGAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATCATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCAGTACCACCATGTTACCAG-TTACAAA-ATATCCTG-AAATGG-ATT-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144805 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAACTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTT------------CTG-AAATTG-ATA-TT---TTCATCGGGGTCATCAA------AATATTCAAT
gi|144806 : AAACATCAGAATATAAAGGTTTGGGTG------------TAAAGCTTTCATATA--GGTTGTTCATGTTGATAAC------------TTT-----------ATTTGGAGATGTGGAA-----------------ACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144807 : AAACATCAGAATATGTAAGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTTGACCACCGCGTTACCAGTTTACCAGTATATCAT-TAAATGACATA-ATCCATTCATCA
gi|144808 : AACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GATTGTTCATGTTGATAAC-----------TTT------------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACAAGGGTCATC-A------AATATTCAGT
gi|144809 : GTTGATAAC-----------TTTT-----------ATGTGTAGATGTGGAAAGGATTCCTGGACCACCATGTTACCACTTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATAATCAGT
gi|144810 : TTATCAGTTTACAAA-ATTTCCTGTAAATGG-ATA-TT---TTCAGCAGAGTCATC-A------AATATTCAGT
blockSeqs : TTTTG TGAAGCTTTTTG TA TTTTATGTTAA ATGTTGATTTT T T T CAT T CCA AAAATTT
blockSeqs : . . . . ATGTTGATTTT . T T CG . . AA
blockSeqs : . . . . ATGTTAATTTT . T T CA . . G
blockSeqs : . . . . . . T T CA . . G
blockSeqs : . . . . . . T T CA . . A
blockSeqs : . . . . . . T T CA . . G
blockSeqs : . . . . . . T T CA . . G
blockSeqs : . . . . . . G T CA . . G
blockSeqs : . . . . . . T T AT . . G
blockSeqs : . . . . . . G T CC . . A
blockSeqs : . . . . . G T AT . . A
blockSeqs : . . . . . G . TT . . A
blockSeqs : . . . . . G . AT . . A
blockSeqs : . . . . . G . AT . . A
blockSeqs : . . . . . G . AT . . A
blockSeqs : . . . . . G . AT . . A
blockSeqs : . . . . . G . AT . . A
blockSeqs : . . . . . G . AT . . A
blockSeqs : . . . . . A . AT . . A
blockSeqs : . . . . . G . AT . . A
blockSeqs : . . . . . A . AT . . A
blockSeqs : . . . . . G . AT . . G
blockSeqs : . . . . . T . AT . . A
blockSeqs : . . . T . CA . .
blockSeqs : . . . AT . .
blockSeqCons :
originalCons : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATNTCCTGTAAATGG-ATA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
finalCons : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATNTCCTGTAAATGG-ATA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
Alignments
lowQualScore : 22222222222 1
lowQualScore : 99999 888888888888 0 22 77777777777 22222222222 1 1 7 333 1 222 77777777
lowQualScore : ..... ............ . .. ........... ........... . . . ... . ... ........
lowQualScore : 11111 555555555555 7 33 66666666666 88888888888 5 5 4 333 5 777 11111111
consensus : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATNTCCTGTAAATGG-ATA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
Reference ( family-721 ) : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATNTCCTGTAAATGG-ATA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
gi|144785 : TTGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGATTCCTGGATCACCACGTTACCAGTTTACAAA-ATTTCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
gi|144786 : TTGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAATTTTGTTTG------------TCAAGCTTTCATTTA--GGTTGTTCATGTTGGTAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGATTCCTGGACCACCACGTTACCAGTTTACAAA-ATTCCCTGTAAATGG-CGA-TT---TTCACCAAGGTCATC-G------AATATTCAGT
gi|144787 : TCGATCAATACTCTATCAA-----AAAGTCTAGCGTCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAAGTGTGGAAAGGGATCTTGGACCACCACGTTACCAGTTTACAAA-ATTTCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
gi|144788 : TCGATCAATACTCCATCAA-----AAAGTAAAACGTCAGAATATGAAGGTTTGTTCG------------TCAAGCTTTCATATA--GCTTGTTCATCTTGACAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGCTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TCCACCAGGGTCATC-A------AATATTCAAT
gi|144789 : TCGATCAATACTCTATCAA-----AAAGTCAAACATCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTAATTTT--GATTGTTCATGTTGATAAC-----------TTTTATGTTGATTTTATGTGGATATGTGGAAAGGATTCCTGGACCACCACGTTACCAGTTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------GATATTCAGT
gi|144790 : TCGATCAATACTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTT-G------------TCAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTCT-----------ATGTTGAGATGTGGAAAGGAATCCTGGACCACCATGTTACCAGTTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCACA-G------GGTTTTCA
gi|144791 : TCGATCAATAATCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TCAAGTTTTCATATA--GGTTATTCATTTTGATAAC-----------TTTTATGTTGATTTTATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTTCTAGTTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATATTCTGT
gi|144792 : TCGATCAATAGTCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGGTTG------------TAAAGCTTTCATATA--CGTAGTTCATGTTGATAAC-----------TTTTATGTTAATTTTATGTGGATATGTGGAAAGGAATCCTTGACCACCACGTTACCAGTTTAAAAT-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATATTCAGT
gi|144793 : TCGATCAGTACTCTATTAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATATAGTTTGTTCATGATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTCGACCACCATGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATATTT---TTTACCAGAGTCATC-A------AATATTCAGT
gi|144794 : TTGATCAATAATCTATCAA-----AAAGTCAAACGTCAGAATATGAAGGTTTGTTTG------------TCAAGCTTTCATATA--GGTAATTCATGTTGATAACTTTTATGTTAATTTT-----------ATGTGGATATGTGGAAAGGAATCCTGGACCACCACATTACAAGTTTACAAA-ATTCCCTGTAAATGG-CCA-TT---
gi|144795 : TCAAT--TCTATCGATTTTGGAA---AAACATTAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACATTTCCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-AT---TTCACCAGAGTCGTC-A------AATATTCAGT
gi|144796 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGTAAAGGAATCCTGGACCACCACGTAACCAGTTAACAAA-ATGTCCTG-AAATGG-TTA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144797 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC------------TTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCAAGTTACCAGTTAACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144798 : AAACATCAGAATATGGGGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGCTCATGATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCTGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144799 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTT---CATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGCAAGGAATCATAGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144800 : AAACATCAGAATATGGAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGTACCACCAAGTTACCAG-TTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATA-TCAGT
gi|144801 : AAACATCAGAATATGAAGGTTTGTTTT------------TGAAACTTTCATATA--GAATGTTCATGTTGATAAC-----------TTT------------ATGTGGAGATGTGGAAATGAATCCTGGACCACCACCTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144802 : AAACATCAGAATATGAAGGTTTGTTTGTGAAGCTTTTTGTGAAGCTTTCATATA--GGCTACTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTTCTG-AAATGG-ATA-TT---TTCATCAGGGTCATC-AAAATTTAATATTCAGT
gi|144803 : AAACATCAGAATATGAA--------------------------GCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCGCCAGGGTCATC-A------AATATTCAGT
gi|144804 : AAACATCAGAATAGGGAGGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATCATGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCAGTACCACCATGTTACCAG-TTACAAA-ATATCCTG-AAATGG-ATT-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144805 : AAACATCAGAATATGAAGGTTTGTTTG------------TGAAACTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTT------------CTG-AAATTG-ATA-TT---TTCATCGGGGTCATCAA------AATATTCAAT
gi|144806 : AAACATCAGAATATAAAGGTTTGGGTG------------TAAAGCTTTCATATA--GGTTGTTCATGTTGATAAC------------TTT-----------ATTTGGAGATGTGGAA-----------------ACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACCAGGGTCATC-A------AATATTCAGT
gi|144807 : AAACATCAGAATATGTAAGTTTGTTTG------------TGAAGCTTTCATATA--GGTTGTTCATGTTGATAAC-----------TTTT-----------ATGTGGAGATGTGGAAAGGAATCCTTGACCACCGCGTTACCAGTTTACCAGTATATCAT-TAAATGACATA-ATCCATTCATCA
gi|144808 : AACATCAGAATATGAAGGTTTGTTTG------------TGAAGCTTTCATATA--GATTGTTCATGTTGATAAC-----------TTT------------ATGTGGAGATGTGGAAAGGAATCCTGGACCACCACGTTACCAGTTTACAAA-ATGTCCTG-AAATGG-ATA-TT---TTCACAAGGGTCATC-A------AATATTCAGT
gi|144809 : GTTGATAAC-----------TTTT-----------ATGTGTAGATGTGGAAAGGATTCCTGGACCACCATGTTACCACTTTACAAA-ATTCCCTGTAAATGG-CAA-TT---TTCACCAGGGTCATC-G------AATAATCAGT
gi|144810 : TTATCAGTTTACAAA-ATTTCCTGTAAATGG-ATA-TT---TTCAGCAGAGTCATC-A------AATATTCAGT