lowQualScore : 1111111111 1111 1 6666666 1
lowQualScore : 3 22 2222222222 7777 22 4 5 9 7 22 222 22 1 1 0 1 3 4444444 22 1 7777777777 1 3
lowQualScore : . .. .......... .... .. . . . . .. ... .. . . . . . ....... .. . .......... . .
lowQualScore : 2 99 9999999999 4444 66 6 3 2 1 33 999 33 6 6 6 6 9 2222222 33 7 6666666666 7 9
consensus : AAATCGTAGAAGATGGTCAAG--ACTATACCG---------TATT---GTAAA--ATAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTGACTT--GTT---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAA-AACCTATC-TTA-A-ATACT--TAGGCT-GGCC----------T-CCGTAGAGGCAAGCCAAAAA
Reference ( gi|109416 ) : AAATCGTAGAAGGTGGTCAAG--ACTATACCG---------CATT---TTAAA--ATAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCGGCGCCATATCGCGTCGTATTAACTT--GTT---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAA-AACCTATCTTTATACATACT--TAGGCT-GGCC----------T-CCGTAGAGGCAAGCCAATAA
gi|109419 : AGATCGTAGAATGTAGTCCAG--ACTATACAG---------CATT---GTAAA--ATAAAGCGCAGAATACAGAATGTATCCGATTTTGAAGGTACACGGCGTCATATTGCGTAGAATTGACAT--GTT---T--CATTTAGAACAGAGTACC-TAATA-TGAAATAAA-AACCTATC-TTA---ATACT--TAGGCT-GGCC----------T-CCGTAGAGGCAAGCCAA
gi|109417 : AAATAGTAGAAGATGGTGAAG--ACTATACCT---------TATT---GTAAA--ATAAAGCGTCGAATACTGAATGTATCCGATTTTGATGGTACCTTTCGCCATATTGCGTTGTATTGACTT--ATT---T--CATTATGAACGGAGTACC-TAACA-GAAAATCAA-AACCTAT-TTTA---ATGAT--TATGCT-GGCC----------T-ACGTAGAGGCAAGCCAAAAAaa
gi|109421 : AAATCGTAGAAGATGATCAAG--ACTATATCG-----------------TAAA--ATAAAGCGTAGAATACAGAAAGTATCAGATTTTGATGGTACCCTGCGCAATATCGCGTTGTATTGACTT--GTT---T--CATTTTGGACAGAGTATC-TAACA-GAAAATCAA-A--CTAATCTTA---ATACT--TAGACT-GGCG----------T-CC-TAGAGGCAAGCCA
gi|109423 : AAATCGTAGAAGATGATCAAA--ACTATACTG---------TATT---GTAAA--ATAAAACGTAGAATACAGAATGTATCCGATTTTACTTGTACCCAGTGCCATATTGCGT---------------T---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAA-AACCTATC-TTA---ATACT--TATCCT-GGCC----------T-CCGTAGAGGCAA
gi|109424 : AAATCGTAGAAGATGGTCAAGGAATTATACCG---------TATT---GTAAT--ATAATGCGTAGAATACATACTGTTTCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTTATCT--GTT---T--CATGTTTAATAGAGTATT-TAACA-GAAAATCAA-TACCTATCTTT----ATACT--TAGGCT-GGCC----------T-CAGTAGTGGCAA-CCAAAAAtcaaaaaa
gi|109422 : AAATAATAGAAGATAATCAAG--ACTATCCAG---------TATT---GTAAA--ATAAAG--TAGAGTACAGAATGTATCCGATTTTGATGGTGCCCTGTGCCATATTGCACTGTACTGACTG--GTT---T--AATTTTGAACAGAGTACC-TTACA-GGAAATCAA-AATCTGTC-TTA---ATACT--TAAACT-GGCC----------T-CCGTGGAGGC-AGTCAAAAA
gi|109418 : AAATCGTAGAAGATGATCAAG--ACTAGACCG---------TATT---GTAAA--ATAAATCGTCGAATACAGAATATATTCGATTTTGATTGTACCCTACGCCATGTTGCTCTGAACGGACTT--GTT---T--CATTTTGTACAGGGTAAC-TAACA-GGATATCAA-AAGCTACC----TAAATACA--TAAGCT-GGCC----------T-CCGTGGAGGCAAGGCAAAAA
gi|109425 : AAAT-GTATAAGATGGCCAAG--ACTATACCG---------TATT---GTAAA--ATAAAGGGTAGAATACATAATTTATCCGATTTTGATGGTACCTTGCGCCATATTGCGTTGTATTGACTT--GTT---T--CA-CTTGAACAGAGTACC-CAACA-GGACATCGA-ATCCTA-ATTTG---ATATT--TAGGCT-TGCT----------T-CCGT
gi|109426 : AAATCGTAGAAGATGACCAAG--ACTATACCG---------TATT---GTAAA--ATAAAGCATAGAATGCAGAATGAGTCCGATTTTGATGGTACCTTGCGCCCTTTTGCGTTGTATTGACTT--GTT---T--CACTTTGAACAGAGTATC--AACA-GGAAAT-A-----------------ATATT--TAGGCT-GGCC----------T-CCGTAGAG
gi|109420 : AAATCGTAGAAAATGGCCAAG--ATTATACCG---------TATT---GTAAA--ATAAAGCATAGAATACAGAATGTATCTGATTTTGATGGTACCTTGCGCCATATTGCGTTATATTTACTT--GTT---T--CACTTTGAACAGAGTACC-C-ACATGGAAATAAA-ATCCT
gi|109427 : AAATCATAGAAGATGATCAAG--ACTATACCG---------TATT---GTAAG--ATAAAACGTAGAATACAGAACGTATCCGAT--------------GCGACATATTGCATTGGTTTGACTT--GTT---T--CATTTTAAACAGAGTACC-TTATA-GGAAATAAT-AATATATC-TTA---ATACT--TAGgaacagagtacccaacaggaaataaaatcttatcttagtacttaggctggcctccgtagaggcaagccaaaaa
gi|109428 : AAAACGTAGAAGATGATCAAG--ACTTAACCGTATATAAAACGTTAAATTAAACAGTAAAACGTTAAAT-CAGAATATATTCTAT----ATGGTACCATGCGCCATATTGC----------------TT---T--TCTTTTGTACACTGTGCC-TAACA-GGTAATGAA-ACGCTATCTATATATA-ATTTATAGGATCGGTC----------T-CCGTAGAGATAAGTCA
gi|109429 : AAATCGTAGAAGACGGTCAAG--ACTATACCG---------TATT---GTAAA--GTGAAGCGTAG
gi|109430 : AATTGTAGAAGATGGTCAAT--GCTATACGG---------TATT---GTAAA--TTAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCTGTGCCATATTGCGTGTTAATGACTT--GTT---T--CATTTTGAAGAGAGTACC-TAACA-GGAAATCCA-AACCTATC---ATA-ATACT--GGGACT-GGCC----------T-CCGTAGAGGCAAACCAAAAA
gi|109431 : GTAGCAGATGATCAAG--ACTATACCG---------TATC---ATAAA--ACAAAACGTAGAATACAGAATGTACCCGATTTTGATGGTACCTTGCGCCATATTGCGTTACATTGATAT--GTT---T--CATTTTGAACAGAGAATC-TAACA-GCAAATCAA-AACCTATC-TTA---ATACT--TAGCCT-GGCC----------T-CCGTAATGGCAAGCCAAAAA
gi|109432 : AGAAGGTGATCAAG--ATTACACCG---------CATT---GTAAA--ATGAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTATCC----------TGCATTGTATTGAGTT--GTT---T--CATTTTGAACAGAGTACC-TAACA-AGAAATTAA-AA---A---------ATACG--TAGGCT-GGCCTCTACTGGCTT-CCGTAAAGGCAA-CCAAAAA
gi|109433 : GAAGGTGGTCAAG--ACTATACTG---------CATT---GTAAA--ATAAAGTGTAGAATACAGAACGTATCAGATTTTGATGGCACCCTGCGCCATATTGTGTTATATTGA--------------------GAACAGAGTACC-TAACA-GGAAATCAA-AACCTATC-TTA---ATACT--TAGGCT-GGCC----------T-CCGTAGAGGCAAGCCAAAAA
gi|109435 : CAAG--ACTAAA-------------AT-------AA--ATAAAGCGTCCTATACAGATTGTTTCTGAATTTGATGGTACCCTGCCTTATATTGTGTTGTTTTGACTT--GTT---T--CATTTTGTACAGGGTACCATAACA-ATATATCAA-AAGCTATC----TAAATACA--TGGGCT-GGCC----------T-CCGTAGAGCCAAGCCAAAAA
gi|109436 : G--ACTCTATCG---------TATT---GTAAA--ATATATCATAGAATACAAAATATATCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTGACGT--GTT---T--CATTTTGAGCATAATACC-TAAAA-GGATATCTA-AACATATC-TCA---ATACT--TAGGCT-GGCC----------T-CCGCAGAGGCAAGCCAA
gi|109437 : TACCA---------TACT---GTAAA--ATAAAGCGTAAAATACAGAATGTGTCCGATTTTGATGGTACCCTGCGTCATATTGCGTTGTATTAACTT--GTT---T--CCTTTTGAACAAAGTACC-TTACA-GGAAATAAA-AAA--ATC-TTA---ACACT--TAGGTT-GGCA----------T-CCGTAGACGCAAGCCAAa
gi|109438 : AA--ATATAGT-TACAA-ACATAATGTATCCGACATC-ATGGTACCCCACACTATAATGCGTGGTACTGACTT--GT---------------ACAGGATAAC-TGACA-GAAAATAAA-AATCTATC--TAAATATA----TAGACT-GGCC----------T-CTGTAa
gi|109439 : GAATGTATCCAATTT------------GCACTATATTGCGTTGTACTG---T--GT---------------ATAGGGTACT-TAATA-GGAAATGAA-AACCTATT----TAGATACA--TAGGAT-GGCC----------TGCTACAGAGGCAAGCTAATAA
gi|109440 : CGATTTTTATGGTACCCTGCGTCATCTTGCGTTACATTGACTT--GTTTTAT--CATTATAAATAGAGTATC-TAACA-GGAAATCAATAA-------TTAT---TACT--TAGGCT-GGCC----------T-CAGTAGAGCCAAGCAAACAA
gi|109441 : TATTGACTT--TTT---TTTCATTTTGAACAGAGTACC-TAACA-GGAAATCAA-AACCTATCTTAATATA------TGGGCT-TGCC----------T-aa
gi|109434 : ACTTACGTC---T--CATTTTATGTAGAGAACC-TAACA-TGAA--CAA-AA---AGCTGTCTAAATATA--TAGACT-GGCT----------T-CCGTAGAAGCAAACCAA
gi|109420 : gaagatgatcaagacatgacagtactttgcgaaataaacacctgcccagtgccaccggaacgcatgttcagcgatcaaaacaaaacgccggttataaaacgttctATCCTGAACAGAGTACC-CAACA-GGAAATAAA-ATCTTATCTT---A-GTACT--TAGGCT-GGCC----------T-CCGTAGAGGCAAGCCAAAAA
Alignments
lowQualScore : 111111111111111 222222222222222222222222222222222222222
lowQualScore : 22 111111111111111 0 222 22 1 1 22 777777777777777777777777777777777777777 1 222 1 7777777777 1 333
lowQualScore : .. ............... . ... .. . . .. ....................................... . ... . .......... . ...
lowQualScore : 88 444444444444444 4 888 22 6 6 55 666666666666666666666666666666666666666 6 888 7 3333333333 7 555
consensus : AAATCGTAGAAGATGGTCAAG--ACTATACCGTATTGTAAAA---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTGACTTGTT---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAAAAC-CT--------------------------ATCT---TA----A-ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
Reference ( family-712 ) : AAATCGTAGAAGATGGTCAAG--ACTATACCGTATTGTAAAA---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTGACTTGTT---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAAAAC-CT--------------------------ATCT---TA----A-ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
gi|109416 : AAATCGTAGAAGGTGGTCAAG--ACTATACCGCATTTTAAAA---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCGGCGCCATATCGCGTCGTATTAACTTGTT---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAAAAC-CT--------------------------ATCTTTATA----C-ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAATAA
gi|109417 : AAATAGTAGAAGATGGTGAAG--ACTATACCTTATTGTAAAA---------------TAAAGCGTCGAATACTGAATGTATCCGATTTTGATGGTACCTTTCGCCATATTGCGTTGTATTGACTTATT---T--CATTATGAACGGAGTACC-TAACA-GAAAATCAAAAC-CT--------------------------ATTT---T-----A-ATGAT---TATGCT-GGCC----------T-ACGTAGAGGCAAGC---CAAAAA
gi|109418 : AAATCGTAGAAGATGATCAAG--ACTAGACCGTATTGTAAAA---------------TAAATCGTCGAATACAGAATATATTCGATTTTGATTGTACCCTACGCCATGTTGCTCTGAACGGACTTGTT---T--CATTTTGTACAGGGTAAC-TAACA-GGATATCAAAAG-CT--------------------------A-CC---TA----A-ATACA---TAAGCT-GGCC----------T-CCGTGGAGGCAAGG---CAAAAA
gi|109419 : AGATCGTAGAATGTAGTCCAG--ACTATACAGCATTGTAAAA---------------TAAAGCGCAGAATACAGAATGTATCCGATTTTGAAGGTACACGGCGTCATATTGCGTAGAATTGACATGTT---T--CATTTAGAACAGAGTACC-TAATA-TGAAATAAAAAC-CT--------------------------ATCT---T-----A-ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAA
gi|109420 : AAATCGTAGAAAATGGCCAAG--ATTATACCGTATTGTAAAA---------------TAAAGCATAGAATACAGAATGTATCTGATTTTGATGGTACCTTGCGCCATATTGCGTTATATTTACTTGTT---T--CACTTTGAACAGAGTACC-C-ACATGGAAATAAAATC-CTGAACAGAGTACCCAACAGGAAATAAAATCT---TATCTTA-GTACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
gi|109421 : AAATCGTAGAAGATGATCAAG--ACTATATCGTA-----AAA---------------TAAAGCGTAGAATACAGAAAGTATCAGATTTTGATGGTACCCTGCGCAATATCGCGTTGTATTGACTTGTT---T--CATTTTGGACAGAGTATC-TAACA-GAAAATCAAA---CTA-------------------------ATCT---T-----A-ATACT---TAGACT-GGCG----------T-CC-TAGAGGCAAGC---CA
gi|109422 : AAATAATAGAAGATAATCAAG--ACTATCCAGTATTGTAAAA---------------TAAAG--TAGAGTACAGAATGTATCCGATTTTGATGGTGCCCTGTGCCATATTGCACTGTACTGACTGGTT---T--AATTTTGAACAGAGTACC-TTACA-GGAAATCAAAAT-CT--------------------------GTCT---T-----A-ATACT---TAAACT-GGCC----------T-CCGTGGAGGC-AGT---CAAAAA
gi|109423 : AAATCGTAGAAGATGATCAAA--ACTATACTGTATTGTAAAA---------------TAAAACGTAGAATACAGAATGTATCCGATTTTACTTGTACCCAGTGCCATATTGCGTT----------------T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAAAAC-CT--------------------------ATCT---T-----A-ATACT---TATCCT-GGCC----------T-CCGTAGAGGCAATC---AAAAAA
gi|109424 : AAATCGTAGAAGATGGTCAAGGAATTATACCGTATTGTAATA---------------TAATGCGTAGAATACATACTGTTTCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTTATCTGTT---T--CATGTTTAATAGAGTATT-TAACA-GAAAATCAATAC-CT--------------------------ATCT---T-----T-ATACT---TAGGCT-GGCC----------T-CAGTAGTGGCAA-C---CAAAAA
gi|109425 : AAAT-GTATAAGATGGCCAAG--ACTATACCGTATTGTAAAA---------------TAAAGGGTAGAATACATAATTTATCCGATTTTGATGGTACCTTGCGCCATATTGCGTTGTATTGACTTGTT---T--CA-CTTGAACAGAGTACC-CAACA-GGACATCGAATC-CT--------------------------AATT---T-----G-ATATT---TAGGCT-TGCT----------T-CCGT
gi|109426 : AAATCGTAGAAGATGACCAAG--ACTATACCGTATTGTAAAA---------------TAAAGCATAGAATGCAGAATGAGTCCGATTTTGATGGTACCTTGCGCCCTTTTGCGTTGTATTGACTTGTT---T--CACTTTGAACAGAGTATC--AACA-GGAAAT------------------------------------------------A-ATATT---TAGGCT-GGCC----------T-CCGTAGAG
gi|109427 : AAATCATAGAAGATGATCAAG--ACTATACCGTATTGTAAGA---------------TAAAACGTAGAATACAGAACGTATCCGA--------------TGCGACATATTGCATTGGTTTGACTTGTT---T--CATTTTAAACAGAGTACC-TTATA-GGAAATAATAAT-AT--------------------------ATCT---T-----A-ATACT---TAG
gi|109428 : AAAACGTAGAAGATGATCAAG--ACTTAACCGTAT-ATAAAACGTTAAATTAAACAGTAAAACGTTAAAT-CAGAATATATTCTAT----ATGGTACCATGCGCCATATTGC--------------TT---T--TCTTTTGTACACTGTGCC-TAACA-GGTAATGAAACG-CT--------------------------ATCTA--TA----T-ATAATTTATAGGATCGGTC----------T-CCGTAGAGATAAGT---CA
gi|109429 : AAATCGTAGAAGACGGTCAAG--ACTATACCGTATTGTAAAG---------------TGAAGCGTAG
gi|109430 : AATTGTAGAAGATGGTCAAT--GCTATACGGTATTGTAAAT---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCTGTGCCATATTGCGTGTTAATGACTTGTT---T--CATTTTGAAGAGAGTACC-TAACA-GGAAATCCAAAC-CT--------------------------ATCA---T-----A-ATACT---GGGACT-GGCC----------T-CCGTAGAGGCAAAC---CAAAAA
gi|109431 : GTAGCAGATGATCAAG--ACTATACCGTATCATAAAA---------------CAAAACGTAGAATACAGAATGTACCCGATTTTGATGGTACCTTGCGCCATATTGCGTTACATTGATATGTT---T--CATTTTGAACAGAGAATC-TAACA-GCAAATCAAAAC-CT--------------------------ATCT---T-----A-ATACT---TAGCCT-GGCC----------T-CCGTAATGGCAAGC---CAAAAA
gi|109432 : AGAAGGTGATCAAG--ATTACACCGCATTGTAAAA---------------TGAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTATCC----------TGCATTGTATTGAGTTGTT---T--CATTTTGAACAGAGTACC-TAACA-AGAAATTAAA---------------------------------------A----A-ATACG---TAGGCT-GGCCTCTACTGGCTT-CCGTAAAGGCAA-C---CAAAAA
gi|109433 : GAAGGTGGTCAAG--ACTATACTGCATTGTAAAA---------------TAAAGTGTAGAATACAGAACGTATCAGATTTTGATGGCACCCTGCGCCATATTGTGTTATATTGA------------------GAACAGAGTACC-TAACA-GGAAATCAAAAC-CT--------------------------ATCT---T-----A-ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
gi|109434 : CGTTCTACTTAC--GTC---T--CATTTTATGTAGAGAACC-TAACA-TGAA--CAAAAAGCT--------------------------GTCT----A----A-ATATA---TAGACT-GGCT----------T-CCGTAGAAGCAAAC---CAA
gi|109435 : gaagatgatcaagacatgacagtactttgcgaaataaacacctgcccagtgccaccggaacgcatgttcagcgatcaaaacaaaacgccggttataaaaCAAG--ACTAAA----AT----AAA---------------TAAAGCGTCCTATACAGATTGTTTCTGAATTTGATGGTACCCTGCCTTATATTGTGTTGTTTTGACTTGTT---T--CATTTTGTACAGGGTACCATAACA-ATATATCAAAAG-CT--------------------------ATC----TA----A-ATACA---TGGGCT-GGCC----------T-CCGTAGAGCCAAGC---CAAAAA
gi|109436 : G--ACTCTATCGTATTGTAAAA---------------TATATCATAGAATACAAAATATATCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTGACGTGTT---T--CATTTTGAGCATAATACC-TAAAA-GGATATCTAAAC-AT--------------------------ATCT---C-----A-ATACT---TAGGCT-GGCC----------T-CCGCAGAGGCAAGC---CAAA
gi|109437 : TACCATACTGTAAAA---------------TAAAGCGTAAAATACAGAATGTGTCCGATTTTGATGGTACCCTGCGTCATATTGCGTTGTATTAACTTGTT---T--CCTTTTGAACAAAGTACC-TTACA-GGAAATAAAAAA-----------------------------ATCT---T-----A-ACACT---TAGGTT-GGCA----------T-CCGTAGACGCAAGC---CAAA
gi|109438 : AAA---------------TATAGT-TACAA-ACATAATGTATCCGACATC-ATGGTACCCCACACTATAATGCGTGGTACTGACTTGT---------------ACAGGATAAC-TGACA-GAAAATAAAAAT-CT--------------------------ATC----TA----A-ATATA---TAGACT-GGCC----------T-CTGTA
gi|109439 : GAATGTATCCAATTT------------GCACTATATTGCGTTGTACTG---TGT---------------ATAGGGTACT-TAATA-GGAAATGAAAAC-CT--------------------------AT-T---TA----G-ATACA---TAGGAT-GGCC----------TGCTACAGAGGCAAGC---TAATAA
gi|109440 : CGATTTTTATGGTACCCTGCGTCATCTTGCGTTACATTGACTTGTTTTAT--CATTATAAATAGAGTATC-TAACA-GGAAATCAATAA-TT--------------------------AT--------------TACT---TAGGCT-GGCC----------T-CAGTAGAGCCAAGCAAACAAAA
gi|109441 : TATTGACTTTTT---TTTCATTTTGAACAGAGTACC-TAACA-GGAAATCAAAAC-CT--------------------------ATCT---TA----ATATA-----TGGGCT-TGCC----------T-
Alignments
lowQualScore : 111111111111111 222222222222222222222222222222222222222
lowQualScore : 22 111111111111111 0 222 22 1 1 22 777777777777777777777777777777777777777 1 222 1 7777777777 1 333
lowQualScore : .. ............... . ... .. . . .. ....................................... . ... . .......... . ...
lowQualScore : 88 444444444444444 4 888 22 6 6 55 666666666666666666666666666666666666666 6 888 7 3333333333 7 555
consensus : AAATCGTAGAAGATGGTCAAG--ACTATACCGTATTGTAAAA---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTGACTTGTT---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAAAAC-CT--------------------------ATCT---TA----A-ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
Reference ( family-712 ) : AAATCGTAGAAGATGGTCAAG--ACTATACCGTATTGTAAAA---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTGACTTGTT---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAAAAC-CT--------------------------ATCT---TA----A-ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
gi|109416 : AAATCGTAGAAGGTGGTCAAG--ACTATACCGCATTTTAAAA---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCGGCGCCATATCGCGTCGTATTAACTTGTT---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAAAAC-CT--------------------------ATCTTTATA----C-ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAATAA
gi|109417 : AAATAGTAGAAGATGGTGAAG--ACTATACCTTATTGTAAAA---------------TAAAGCGTCGAATACTGAATGTATCCGATTTTGATGGTACCTTTCGCCATATTGCGTTGTATTGACTTATT---T--CATTATGAACGGAGTACC-TAACA-GAAAATCAAAAC-CT--------------------------ATTT---T-----A-ATGAT---TATGCT-GGCC----------T-ACGTAGAGGCAAGC---CAAAAA
gi|109418 : AAATCGTAGAAGATGATCAAG--ACTAGACCGTATTGTAAAA---------------TAAATCGTCGAATACAGAATATATTCGATTTTGATTGTACCCTACGCCATGTTGCTCTGAACGGACTTGTT---T--CATTTTGTACAGGGTAAC-TAACA-GGATATCAAAAG-CT--------------------------A-CC---TA----A-ATACA---TAAGCT-GGCC----------T-CCGTGGAGGCAAGG---CAAAAA
gi|109419 : AGATCGTAGAATGTAGTCCAG--ACTATACAGCATTGTAAAA---------------TAAAGCGCAGAATACAGAATGTATCCGATTTTGAAGGTACACGGCGTCATATTGCGTAGAATTGACATGTT---T--CATTTAGAACAGAGTACC-TAATA-TGAAATAAAAAC-CT--------------------------ATCT---T-----A-ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAA
gi|109420 : AAATCGTAGAAAATGGCCAAG--ATTATACCGTATTGTAAAA---------------TAAAGCATAGAATACAGAATGTATCTGATTTTGATGGTACCTTGCGCCATATTGCGTTATATTTACTTGTT---T--CACTTTGAACAGAGTACC-C-ACATGGAAATAAAATC-CTGAACAGAGTACCCAACAGGAAATAAAATCT---TATCTTA-GTACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
gi|109421 : AAATCGTAGAAGATGATCAAG--ACTATATCGTA-----AAA---------------TAAAGCGTAGAATACAGAAAGTATCAGATTTTGATGGTACCCTGCGCAATATCGCGTTGTATTGACTTGTT---T--CATTTTGGACAGAGTATC-TAACA-GAAAATCAAA---CTA-------------------------ATCT---T-----A-ATACT---TAGACT-GGCG----------T-CC-TAGAGGCAAGC---CA
gi|109422 : AAATAATAGAAGATAATCAAG--ACTATCCAGTATTGTAAAA---------------TAAAG--TAGAGTACAGAATGTATCCGATTTTGATGGTGCCCTGTGCCATATTGCACTGTACTGACTGGTT---T--AATTTTGAACAGAGTACC-TTACA-GGAAATCAAAAT-CT--------------------------GTCT---T-----A-ATACT---TAAACT-GGCC----------T-CCGTGGAGGC-AGT---CAAAAA
gi|109423 : AAATCGTAGAAGATGATCAAA--ACTATACTGTATTGTAAAA---------------TAAAACGTAGAATACAGAATGTATCCGATTTTACTTGTACCCAGTGCCATATTGCGTT----------------T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAAAAC-CT--------------------------ATCT---T-----A-ATACT---TATCCT-GGCC----------T-CCGTAGAGGCAATC---AAAAAA
gi|109424 : AAATCGTAGAAGATGGTCAAGGAATTATACCGTATTGTAATA---------------TAATGCGTAGAATACATACTGTTTCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTTATCTGTT---T--CATGTTTAATAGAGTATT-TAACA-GAAAATCAATAC-CT--------------------------ATCT---T-----T-ATACT---TAGGCT-GGCC----------T-CAGTAGTGGCAA-C---CAAAAA
gi|109425 : AAAT-GTATAAGATGGCCAAG--ACTATACCGTATTGTAAAA---------------TAAAGGGTAGAATACATAATTTATCCGATTTTGATGGTACCTTGCGCCATATTGCGTTGTATTGACTTGTT---T--CA-CTTGAACAGAGTACC-CAACA-GGACATCGAATC-CT--------------------------AATT---T-----G-ATATT---TAGGCT-TGCT----------T-CCGT
gi|109426 : AAATCGTAGAAGATGACCAAG--ACTATACCGTATTGTAAAA---------------TAAAGCATAGAATGCAGAATGAGTCCGATTTTGATGGTACCTTGCGCCCTTTTGCGTTGTATTGACTTGTT---T--CACTTTGAACAGAGTATC--AACA-GGAAAT------------------------------------------------A-ATATT---TAGGCT-GGCC----------T-CCGTAGAG
gi|109427 : AAATCATAGAAGATGATCAAG--ACTATACCGTATTGTAAGA---------------TAAAACGTAGAATACAGAACGTATCCGA--------------TGCGACATATTGCATTGGTTTGACTTGTT---T--CATTTTAAACAGAGTACC-TTATA-GGAAATAATAAT-AT--------------------------ATCT---T-----A-ATACT---TAG
gi|109428 : AAAACGTAGAAGATGATCAAG--ACTTAACCGTAT-ATAAAACGTTAAATTAAACAGTAAAACGTTAAAT-CAGAATATATTCTAT----ATGGTACCATGCGCCATATTGC--------------TT---T--TCTTTTGTACACTGTGCC-TAACA-GGTAATGAAACG-CT--------------------------ATCTA--TA----T-ATAATTTATAGGATCGGTC----------T-CCGTAGAGATAAGT---CA
gi|109429 : AAATCGTAGAAGACGGTCAAG--ACTATACCGTATTGTAAAG---------------TGAAGCGTAG
gi|109430 : AATTGTAGAAGATGGTCAAT--GCTATACGGTATTGTAAAT---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCTGTGCCATATTGCGTGTTAATGACTTGTT---T--CATTTTGAAGAGAGTACC-TAACA-GGAAATCCAAAC-CT--------------------------ATCA---T-----A-ATACT---GGGACT-GGCC----------T-CCGTAGAGGCAAAC---CAAAAA
gi|109431 : GTAGCAGATGATCAAG--ACTATACCGTATCATAAAA---------------CAAAACGTAGAATACAGAATGTACCCGATTTTGATGGTACCTTGCGCCATATTGCGTTACATTGATATGTT---T--CATTTTGAACAGAGAATC-TAACA-GCAAATCAAAAC-CT--------------------------ATCT---T-----A-ATACT---TAGCCT-GGCC----------T-CCGTAATGGCAAGC---CAAAAA
gi|109432 : AGAAGGTGATCAAG--ATTACACCGCATTGTAAAA---------------TGAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTATCC----------TGCATTGTATTGAGTTGTT---T--CATTTTGAACAGAGTACC-TAACA-AGAAATTAAA---------------------------------------A----A-ATACG---TAGGCT-GGCCTCTACTGGCTT-CCGTAAAGGCAA-C---CAAAAA
gi|109433 : GAAGGTGGTCAAG--ACTATACTGCATTGTAAAA---------------TAAAGTGTAGAATACAGAACGTATCAGATTTTGATGGCACCCTGCGCCATATTGTGTTATATTGA------------------GAACAGAGTACC-TAACA-GGAAATCAAAAC-CT--------------------------ATCT---T-----A-ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
gi|109434 : CGTTCTACTTAC--GTC---T--CATTTTATGTAGAGAACC-TAACA-TGAA--CAAAAAGCT--------------------------GTCT----A----A-ATATA---TAGACT-GGCT----------T-CCGTAGAAGCAAAC---CAA
gi|109435 : gaagatgatcaagacatgacagtactttgcgaaataaacacctgcccagtgccaccggaacgcatgttcagcgatcaaaacaaaacgccggttataaaaCAAG--ACTAAA----AT----AAA---------------TAAAGCGTCCTATACAGATTGTTTCTGAATTTGATGGTACCCTGCCTTATATTGTGTTGTTTTGACTTGTT---T--CATTTTGTACAGGGTACCATAACA-ATATATCAAAAG-CT--------------------------ATC----TA----A-ATACA---TGGGCT-GGCC----------T-CCGTAGAGCCAAGC---CAAAAA
gi|109436 : G--ACTCTATCGTATTGTAAAA---------------TATATCATAGAATACAAAATATATCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTGACGTGTT---T--CATTTTGAGCATAATACC-TAAAA-GGATATCTAAAC-AT--------------------------ATCT---C-----A-ATACT---TAGGCT-GGCC----------T-CCGCAGAGGCAAGC---CAAA
gi|109437 : TACCATACTGTAAAA---------------TAAAGCGTAAAATACAGAATGTGTCCGATTTTGATGGTACCCTGCGTCATATTGCGTTGTATTAACTTGTT---T--CCTTTTGAACAAAGTACC-TTACA-GGAAATAAAAAA-----------------------------ATCT---T-----A-ACACT---TAGGTT-GGCA----------T-CCGTAGACGCAAGC---CAAA
gi|109438 : AAA---------------TATAGT-TACAA-ACATAATGTATCCGACATC-ATGGTACCCCACACTATAATGCGTGGTACTGACTTGT---------------ACAGGATAAC-TGACA-GAAAATAAAAAT-CT--------------------------ATC----TA----A-ATATA---TAGACT-GGCC----------T-CTGTA
gi|109439 : GAATGTATCCAATTT------------GCACTATATTGCGTTGTACTG---TGT---------------ATAGGGTACT-TAATA-GGAAATGAAAAC-CT--------------------------AT-T---TA----G-ATACA---TAGGAT-GGCC----------TGCTACAGAGGCAAGC---TAATAA
gi|109440 : CGATTTTTATGGTACCCTGCGTCATCTTGCGTTACATTGACTTGTTTTAT--CATTATAAATAGAGTATC-TAACA-GGAAATCAATAA-TT--------------------------AT--------------TACT---TAGGCT-GGCC----------T-CAGTAGAGCCAAGCAAACAAAA
gi|109441 : TATTGACTTTTT---TTTCATTTTGAACAGAGTACC-TAACA-GGAAATCAAAAC-CT--------------------------ATCT---TA----ATATA-----TGGGCT-TGCC----------T-
blockSeqs : GA CGTTAAATTAAACAG TTA TT A T AG GAACAGAGTACCCAACAGGAAATAAAATCTTATCTT T TTA C TCTACTGGCT G AAA
blockSeqs : . . . . . . C ATCTATA . . . . . .
blockSeqs : . . . . . . G AATCTT . . . . . .
blockSeqs : . . . . . . C ATCTTA . . . . . .
blockSeqs : . . . . . . C ATTTT . . . . . .
blockSeqs : . . . . . . T ACCTA . . . . . .
blockSeqs : . . . . . . C ATCTT . . . . . .
blockSeqs : . . . . . . C GTCTT . . . . . .
blockSeqs : . . . . . . C ATCTT . . . . . .
blockSeqs : . . . . . . T ATCTT . . . . . .
blockSeqs : . . . . . . G AATTT . . . . . .
blockSeqs : . . . . . . C ATCTT . . . . . .
blockSeqs : . . . . . . C ATCAT . . . . . .
blockSeqs : . . . . . . C ATCTT . . . . . .
blockSeqs : . . . . . . G ATCTT . . . . . .
blockSeqs : . . . . . . C GTCTA . . . . . .
blockSeqs : . . . . . . A ATCTA . . . . . .
blockSeqs : . . . . . . T ATCTC . . . . . .
blockSeqs : . . . . . . C ATCTT . . . . . .
blockSeqs : . . . . . A ATCTA . . . . .
blockSeqs : . . . . . C ATTTA . . . . .
blockSeqs : . . . . . AT . . . . .
blockSeqs : . . . . . A . . . . .
blockSeqs : . . . . . . . .
blockSeqCons : ATCTT**********************************
originalCons : AAATCGTAGAAGATGGTCAAG--ACTATACCGTATTGTAAAA---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTGACTTGTT---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAAAAC-CT--------------------------ATCT---TA----A-ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
finalCons : AAATCGTAGAAGATGGTCAAG--ACTATACCGTATTGTAAAA---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTGACTTGTT---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAAAAC-CTATCTT----------------------------------A-ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
Alignments
lowQualScore : 111111111111111 11111111111111111111111111
lowQualScore : 22 111111111111111 0 222 22 1 1 1 44 88888888888888888888888888 1 1 44444 444 222 1 7777777777 1 333
lowQualScore : .. ............... . ... .. . . . .. .......................... . . ..... ... ... . .......... . ...
lowQualScore : 88 444444444444444 4 888 22 6 6 6 55 22222222222222222222222222 6 6 00000 444 888 7 3333333333 7 555
consensus : AAATCGTAGAAGATGGTCAAG--ACTATACCGTATTGTAAAA---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTGACTTGTT---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAA-AAC-CT--------------------------ATC-T-T-----A---ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
Reference ( family-712 ) : AAATCGTAGAAGATGGTCAAG--ACTATACCGTATTGTAAAA---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTGACTTGTT---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAA-AAC-CT--------------------------ATC-T-T-----A---ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
gi|109416 : AAATCGTAGAAGGTGGTCAAG--ACTATACCGCATTTTAAAA---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCGGCGCCATATCGCGTCGTATTAACTTGTT---T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAA-AAC-CT--------------------------ATCTT-T-----ATACATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAATAA
gi|109417 : AAATAGTAGAAGATGGTGAAG--ACTATACCTTATTGTAAAA---------------TAAAGCGTCGAATACTGAATGTATCCGATTTTGATGGTACCTTTCGCCATATTGCGTTGTATTGACTTATT---T--CATTATGAACGGAGTACC-TAACA-GAAAATCAA-AAC-CT--------------------------ATT-T-T-----A---ATGAT---TATGCT-GGCC----------T-ACGTAGAGGCAAGC---CAAAAA
gi|109418 : AAATCGTAGAAGATGATCAAG--ACTAGACCGTATTGTAAAA---------------TAAATCGTCGAATACAGAATATATTCGATTTTGATTGTACCCTACGCCATGTTGCTCTGAACGGACTTGTT---T--CATTTTGTACAGGGTAAC-TAACA-GGATATCAA-AAG-CT--------------------------ACC-T-A-----A---ATACA---TAAGCT-GGCC----------T-CCGTGGAGGCAAGG---CAAAAA
gi|109419 : AGATCGTAGAATGTAGTCCAG--ACTATACAGCATTGTAAAA---------------TAAAGCGCAGAATACAGAATGTATCCGATTTTGAAGGTACACGGCGTCATATTGCGTAGAATTGACATGTT---T--CATTTAGAACAGAGTACC-TAATA-TGAAATAAA-AAC-CT--------------------------ATC-T-T-----A---ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAA
gi|109420 : AAATCGTAGAAAATGGCCAAG--ATTATACCGTATTGTAAAA---------------TAAAGCATAGAATACAGAATGTATCTGATTTTGATGGTACCTTGCGCCATATTGCGTTATATTTACTTGTT---T--CACTTTGAACAGAGTACC-C-ACATGGAAATAAA-ATC-CTGAACAGAGTACCCAACAGGAAATAAAATC-T-TATCTTA---GTACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
gi|109421 : AAATCGTAGAAGATGATCAAG--ACTATATCGTA-----AAA---------------TAAAGCGTAGAATACAGAAAGTATCAGATTTTGATGGTACCCTGCGCAATATCGCGTTGTATTGACTTGTT---T--CATTTTGGACAGAGTATC-TAACA-GAAAATCAA-A---CTA-------------------------ATC-T-T-----A---ATACT---TAGACT-GGCG----------T-CC-TAGAGGCAAGC---CA
gi|109422 : AAATAATAGAAGATAATCAAG--ACTATCCAGTATTGTAAAA---------------TAAAG--TAGAGTACAGAATGTATCCGATTTTGATGGTGCCCTGTGCCATATTGCACTGTACTGACTGGTT---T--AATTTTGAACAGAGTACC-TTACA-GGAAATCAA-AAT-CT--------------------------GTC-T-T-----A---ATACT---TAAACT-GGCC----------T-CCGTGGAGGC-AGT---CAAAAA
gi|109423 : AAATCGTAGAAGATGATCAAA--ACTATACTGTATTGTAAAA---------------TAAAACGTAGAATACAGAATGTATCCGATTTTACTTGTACCCAGTGCCATATTGCGTT----------------T--CATTTTGAACAGAGTACC-TAACA-GGAAATCAA-AAC-CT--------------------------ATC-T-T-----A---ATACT---TATCCT-GGCC----------T-CCGTAGAGGCAATC---AAAAAA
gi|109424 : AAATCGTAGAAGATGGTCAAGGAATTATACCGTATTGTAATA---------------TAATGCGTAGAATACATACTGTTTCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTTATCTGTT---T--CATGTTTAATAGAGTATT-TAACA-GAAAATCAA-TAC-CT--------------------------ATC-T-T-----T---ATACT---TAGGCT-GGCC----------T-CAGTAGTGGCAA-C---CAAAAA
gi|109425 : AAAT-GTATAAGATGGCCAAG--ACTATACCGTATTGTAAAA---------------TAAAGGGTAGAATACATAATTTATCCGATTTTGATGGTACCTTGCGCCATATTGCGTTGTATTGACTTGTT---T--CA-CTTGAACAGAGTACC-CAACA-GGACATCGA-ATC-CT--------------------------AAT-T-T-----G---ATATT---TAGGCT-TGCT----------T-CCGT
gi|109426 : AAATCGTAGAAGATGACCAAG--ACTATACCGTATTGTAAAA---------------TAAAGCATAGAATGCAGAATGAGTCCGATTTTGATGGTACCTTGCGCCCTTTTGCGTTGTATTGACTTGTT---T--CACTTTGAACAGAGTATC--AACA-GGAAA-------------------------------------------T-----A---ATATT---TAGGCT-GGCC----------T-CCGTAGAG
gi|109427 : AAATCATAGAAGATGATCAAG--ACTATACCGTATTGTAAGA---------------TAAAACGTAGAATACAGAACGTATCCGA--------------TGCGACATATTGCATTGGTTTGACTTGTT---T--CATTTTAAACAGAGTACC-TTATA-GGAAATAAT-AAT-AT--------------------------ATC-T-T-----A---ATACT---TAG
gi|109428 : AAAACGTAGAAGATGATCAAG--ACTTAACCGTAT-ATAAAACGTTAAATTAAACAGTAAAACGTTAAAT-CAGAATATATTCTAT----ATGGTACCATGCGCCATATTGC--------------TT---T--TCTTTTGTACACTGTGCC-TAACA-GGTAATGAA-ACG-CT--------------------------ATC-TAT-----AT--ATAATTTATAGGATCGGTC----------T-CCGTAGAGATAAGT---CA
gi|109429 : AAATCGTAGAAGACGGTCAAG--ACTATACCGTATTGTAAAG---------------TGAAGCGTAG
gi|109430 : AATTGTAGAAGATGGTCAAT--GCTATACGGTATTGTAAAT---------------TAAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTACCCTGTGCCATATTGCGTGTTAATGACTTGTT---T--CATTTTGAAGAGAGTACC-TAACA-GGAAATCCA-AAC-CT--------------------------ATC-A-T-----A---ATACT---GGGACT-GGCC----------T-CCGTAGAGGCAAAC---CAAAAA
gi|109431 : GTAGCAGATGATCAAG--ACTATACCGTATCATAAAA---------------CAAAACGTAGAATACAGAATGTACCCGATTTTGATGGTACCTTGCGCCATATTGCGTTACATTGATATGTT---T--CATTTTGAACAGAGAATC-TAACA-GCAAATCAA-AAC-CT--------------------------ATC-T-T-----A---ATACT---TAGCCT-GGCC----------T-CCGTAATGGCAAGC---CAAAAA
gi|109432 : AGAAGGTGATCAAG--ATTACACCGCATTGTAAAA---------------TGAAGCGTAGAATACAGAATGTATCCGATTTTGATGGTATCC----------TGCATTGTATTGAGTTGTT---T--CATTTTGAACAGAGTACC-TAACA-AGAAATTAA-AA------------------------------------------A---ATACG---TAGGCT-GGCCTCTACTGGCTT-CCGTAAAGGCAA-C---CAAAAA
gi|109433 : GAAGGTGGTCAAG--ACTATACTGCATTGTAAAA---------------TAAAGTGTAGAATACAGAACGTATCAGATTTTGATGGCACCCTGCGCCATATTGTGTTATATTGA------------------GAACAGAGTACC-TAACA-GGAAATCAA-AAC-CT--------------------------ATC-T-T-----A---ATACT---TAGGCT-GGCC----------T-CCGTAGAGGCAAGC---CAAAAA
gi|109434 : CGTTCTACTTAC--GTC---T--CATTTTATGTAGAGAACC-TAACA-TGAA--CAA-AAAGCT--------------------------GTC-T-A-----A---ATATA---TAGACT-GGCT----------T-CCGTAGAAGCAAAC---CAA
gi|109435 : gaagatgatcaagacatgacagtactttgcgaaataaacacctgcccagtgccaccggaacgcatgttcagcgatcaaaacaaaacgccggttataaaaCAAG--ACTAAA----AT----AAA---------------TAAAGCGTCCTATACAGATTGTTTCTGAATTTGATGGTACCCTGCCTTATATTGTGTTGTTTTGACTTGTT---T--CATTTTGTACAGGGTACCATAACA-ATATATCAA-AAG-CT--------------------------ATC-T-A-----A---ATACA---TGGGCT-GGCC----------T-CCGTAGAGCCAAGC---CAAAAA
gi|109436 : G--ACTCTATCGTATTGTAAAA---------------TATATCATAGAATACAAAATATATCCGATTTTGATGGTACCCTGCGCCATATTGCGTTGTATTGACGTGTT---T--CATTTTGAGCATAATACC-TAAAA-GGATATCTA-AAC-AT--------------------------ATC-T-C-----A---ATACT---TAGGCT-GGCC----------T-CCGCAGAGGCAAGC---CAAA
gi|109437 : TACCATACTGTAAAA---------------TAAAGCGTAAAATACAGAATGTGTCCGATTTTGATGGTACCCTGCGTCATATTGCGTTGTATTAACTTGTT---T--CCTTTTGAACAAAGTACC-TTACA-GGAAATAAA-AAA-----------------------------ATC-T-T-----A---ACACT---TAGGTT-GGCA----------T-CCGTAGACGCAAGC---CAAA
gi|109438 : AAA---------------TATAGT-TACAA-ACATAATGTATCCGACATC-ATGGTACCCCACACTATAATGCGTGGTACTGACTTGT---------------ACAGGATAAC-TGACA-GAAAATAAA-AAT-CT--------------------------ATC-T-A-----A---ATATA---TAGACT-GGCC----------T-CTGTA
gi|109439 : GAATGTATCCAATTT------------GCACTATATTGCGTTGTACTG---TGT---------------ATAGGGTACT-TAATA-GGAAATGAA-AAC-CT--------------------------ATT-T-A-----G---ATACA---TAGGAT-GGCC----------TGCTACAGAGGCAAGC---TAATAA
gi|109440 : CGATTTTTATGGTACCCTGCGTCATCTTGCGTTACATTGACTTGTTTTAT--CATTATAAATAGAGTATC-TAACA-GGAAATCAATAA----------------------------------T-T-----A---TTACT---TAGGCT-GGCC----------T-CAGTAGAGCCAAGCAAACAAAA
gi|109441 : TATTGACTTTTT---TTTCATTTTGAACAGAGTACC-TAACA-GGAAATCAA-AAC-CT--------------------------ATC-T-T-----A---ATATA---TGGGCT-TGCC----------T-