lowQualScore : 11 11 1 22222222 3333333 11111111111111 6666666666666666666666666666666666666666666666 5555555555555555555555555555555555555 1111111111 1
lowQualScore : 9 33 0 2 6 00 88 1 333 5 55555555 2 88888888888 1111111 99999999999999 333 2222222222222222222222222222222222222222222222 77 9999999999999999999999999999999999999 333 2 22 2222222222 8 4 2 1 8 3
lowQualScore : . .. . . . .. .. . ... . ........ . ........... ....... .............. ... .............................................. .. ..................................... ... . .. .......... . . . . . .
lowQualScore : 4 44 5 4 2 66 11 7 000 7 11111111 3 33333333333 3333333 55555555555555 000 5555555555555555555555555555555555555555555555 44 9999999999999999999999999999999999999 222 8 55 5555555555 1 4 4 4 6 8
consensus : TCCTGACGAGTGGTTTTTGTCTGCGGACGAGTGATTTTT-ACCAGTAACTAGTCCGTCGGACGAGTAAACTTTTTGGCCGAGACCAAAAAATAA-ACAA---TCTG-AAAA-C------TGTGAAAA-----------AG-A--A--ATGA------------TACAAA---GTC-------------GTT------------A---C-------G-----GTATTTATTCTTTCTACATTTCAACGC---TATA--A-----AT---A-T------C-------AT---TTGCAAAC--TN---------GACATTGAACGTTCNTCGGCGATAANTT-TATCACGCAATT
Reference ( gi|19854 ) : TCCTGACGACTGGTTTTTGTCTGCGGACGAGTGATTTTT-GCCAGTAACTAGTCCGTCGGATGAGTAAACCTTTTGGCAGAGATCAAAAAATAA-ACAA---TCTG-AAAA-T------TGTAAAAA-----------AG-G-TA--ATGA------------TCCAAA---GTC-------------GTT------------A---C-------G-----GTATTTATTCTTTCTATATTTCATTGC---TGTA--A-----AT---A-T------A-------AT---TTGTAAAT--TT---------GACATTTAACGATCATCAACGATAACTT-TATCATGCAATT
gi|19855 : TCCTGACGACTGATTTTTGTCTGCGAACGAGTGATTTTT-ACCAGTATCTAATCTGTCGGACAAGTAAACCTTTTGGCAGAGATAAAAAAATAA-ACAA---TCTG-AAAA-C------TGTAAAAA-----------AA-G-TT--ATGA------------TCCAAA---GTC-------------ATT------------A---C-------A-----GTATTTATTCTTTCTATATTTCATTGC---TGTA--A-----AT---A-T------A-------AT---CTGTAAAT--TT---------GAAATTTAACGATCATCAACGATAACTT-TATCATGCAATT
gi|19856 : TCCTGATGACTGGTTTTTGTCTTAGGACGAGTGATTATT-ACCAGTAACTAGTCTGTCCGATGGGTAAACTTTTTGGCCGAGATCAAAAAATAA-ACTA---TCT--AAAA-TAA----TGTAAAAA-----------AAAG-TA--ATGA------------TCCAAA---GTC-------------GTT------------A---T-------G-----GTATTTATTCTTTCTATATTTCATTGC---TGAA--A-----AT---A-T------C-------AT---TTGTAAAT--TT---------GATATTTAACGTTCATCAACGATAACTT-TATCATGCAAT
gi|19857 : TCCTGACGAGTGGTTTTTGTCTGTGGACGAGTGATTTTT-ACCAGTTACTAGACCATCGGATGAGTAAACTTTTTGATCAAGATTGAAAAATAA-ACAA---TCTG-AAAA-C------TGTTAAAA-----------AA-G-AA--ATGA------------TACAAA---GTC-------------GTT------------A---C-------G-----GTATTTATTCTTTCTAT-TTACGTTGT---TGCA--A-----AT---A-T------C-------AT---TTGTAAAT--TT---------GACATTTAACGTTCATCAACGATAACTT-TATCATGCAATT
gi|19858 : TTCTGACGAGTGGTTTTTGTCTGCAGACGAGAGGTTTTT-ACCAGTAACTAGTCAGTCTGACAAGTAAACTTTTTGGCCGAGATCGAAAAATAA-AC-A---TCTG-AAAA-C------TGTAAAAA-----------AG-A--A--ACAA------------TCCAAA---GTC-------------GTT------------A---C-------A-----GTATTTATTCTTTCTATATTTCATTGC---TGCA--A-----AT---A-TCATA--A-------AT---TTGTAAAT--TT---------GACATTTAACGTTCATCAACAATAACTT-AATCATGCAATT
gi|19859 : TCCTGACGAGTGGTTTTTGCCTGTGGACAAGTGGTTTTT-ACCAGTAACTAGTCCGTCGGATGAGTAAACTTTTTGGCCGAGATCGAAAAATAA-ACAA---TCTG-AAAA-C------TGTAAAAA-----------AG-ACT----TGA------------TTTGAA---GTC-------------GTTTGTC--------A---C-------A-----GTATTTATTCTTTCTATATTTCATTGC---TAGA--A-----AT---A-T------C-------AT---TTGTAAAT--TT---------GACATTTAATGTTCATCAATGGTAACTC-TCTCATGCAATT
gi|19860 : TCCTGACAAGTGGTTTTTGTCTGCGGATGAGTAATTTTT-ACCAGTAACCAGTCTATTGCACGAGTAAACTTTTTGGCCGAGATAAAAAAAAAA-ATAA---TCTG-AAAA---------ATAAAA----------------------TGG------------TCCAAA---GTC-------------GTT------------A---T-------G-----GTATTTATTCTTTCTATATTTAATTGC---TGTA--A-----AT---A-T------C-------AT---TTGTAAAT--TT---------GACATTTAACGTTCATCAGCGATAACTT-TATAGTGCAATT
gi|19861 : TCCTGACGAGTGGGTTTTGTCTGCAGACGAGTGATTTTTTACCAGTTACTAGTCCGTCAGACGAGTAAACGTTTTGGCCAAGATCGAAAAAT------------------A-C------TGTAAAAA----------------TATTTTTA------------TCCAAA---GTC-------------GTT------------A---C-------G-----GTATTTATTCTTTCTATATTTCATTGC---TCTA--A-----AT---A-T------C-------AT---TTG-AAAC--TT---------------------TCATCGATGATAACTT-TATCATACAA
gi|19862 : TCCTAGC-AGTGGTTTTTGTCTGCGTACGAGTAATTTTT-ACCAGTAACTAGTCTATTGGACCAGTAAACATTTTGGCCAAAATC
gi|19863 : TCGTAACGAATGGTTTCTGCTTGCAGATGAGTTATTTTT-ATCAGTAACTAGTCTGTCAGACGAGTGAACTTT
gi|19864 : GCGGATGAGTGATTTTC--CCAGTAAATAGTTCGCTGGAGGAGTAAACTTT
gi|19865 : TGACA-AGACCAAAA-ATAA-ACAA---TCTGAAAAA-C------TTTGAAAA-----------AG-A--A--ATGACACAAAATTGTTTCTGAA---ATG-------------GTT------------A---C-------A-----GTATTTATTCTTTCTACATTTTAACGCAATTATA--ACT---ATTAAA-T------C-------AT---TTGCAAAC--TA---------GACATTGACCATTCCTCGGCAATAA-GT-TATAACACAA
gi|19866 : AGATCAAAAG-TAA-ACAA---TCTGAAAAA-C------TGTGAAAA-----------AG-A--A--ATAA------------TACAAA---TTCGTTTCTGAAATG-GTT------------A---C-------A-----GTATTTATTCTTTCTACATTTCAACGCAATTATA--ATT---ATCAAA-T------C-------AT---TTGCAAAT--CA---------GACATTGAACGTTCCTCGGCAATAAGTT-
gi|19867 : AGACCAAAAG-TAA-ACAA---TCTGAAAAA-C------TGTGAAAA-----------AG-A--A--ATAA------------TACAAATTTGTTTCTGAAATG----GTT------------A---C-------A-----GTATTTATTCTTTCTACATTTCAACGCAATTATA--ATT---ATCAAA-T------C-------AT---TTGCAAAT--TA---------GACATTGAACGTTCCTCGGCAATAAGTT-
gi|19868 : AGACCAAAA-ATAA-ACAA---TCTGAAAAA-C------TGCGAAAA-----------AG-A-T---ATGA------------CACAAA---ATC-------------GTT------------T---C-------T-----GAATTTATTCTTTCTACAT---ATCGA---CGCA--A-----TT---A-T------A-------AT---TTTTAAATCATTTGCAATGTAGACATTGAATGTTCCTCGACAATAAGTT-
gi|19869 : AGACCAAAAGTTAA--CAA---TCTGAAAAA-C------TGTGAAAA-----------AG-A--A--ATAA------------TACAAA---ATTCGTTTCTGAAATGGTT------------A---C-------A-----GTATTTATTCTTTCTACATTTCAACGC---AATA--A-----TT---ATT------ATTAAACCAT---TTGCAAAT--TA---------GACATTGAACGTTCCTCGGCAATAAGTT-
gi|19871 : AGACCAAAA--TAA-ACAA---TCTG-AAAAAT------TGTGAAAA-----------AG-A--A--ATGA------------CACAAA---ATCATTTCTGAAATT-GTT------------A---C-------A-----GTATTTATTCTTTCTACATTTCA
gi|19870 : AGACCAAAAA-TAA-ACAA---TCTG-AAAAAC------TGTGAAAA-----------AG-A--A--ATGA------------CACAAA---ATCATTTCTGAAATT-GTT------------A---C-------A-----GTATTTATTCTTTCTACATTTCAACACAATTATA--ATT---ATTAAA-T------C-------AT---TTGCAAAC--TA---------GACAT
gi|19872 : AGACCAAAAA-TAA-ACAA---TCTGTAAAA-C------TGCGAAAA-----------AG-A--A--ATTA------------CACAAA---ATCATTTCTGAAATT-GTT------------A---C-------A-----GTATTTATTCTTTCTACATTTCAACGCATTTATA--ATGGTTAA---A-T------C-------AT---TTGCAAAC--TA---------GACATTGAACGTTCCTCGGCATTAA-GT-TATAACACAA
gi|19873 : AGACCAAAAA-TAA-ACAA---TCTG-AAAAAC------TGCGAAAA-----------AG-A-TA---TGA------------TAAAAA---ATC-------------GTTTCTGAAATAGTTA---C-------A-----GAATTTATTCTTTCTACATGTCAACGCAATTATA--ATT---ATTAAA-T------C-------AT---TTGCAAAG--TA---------GACATAGAACGTTCCTCGGCAATAA-GT-TATAACACAA
gi|19875 : AGACCAAAA-ATAA-ACAA---TTTGAAAAA-C------TGTGAAAT-----------AG-A--A--ATGA------------CACAAA---ATCGTTTCTGAAATA-GTT------------A---C-------A-----TTATTTATTATTTCTACAAATCAACGCAATTATAACA-----ATTAAA-T------C-------AT---TTGCAAAC--TA---------GACATTGAGCATTCATCGGCAATAAGTTATAACATG
gi|19874 : AGACCAAAA-ATAA-ACAA---TCTGAAAAA-C------TGTGAAAT-----------AG-A--A--ATGA------------CACAAA---ATT-------------GTT------------T---CTGAAATAG-----TTATTTATTCTTTCTACAATT-ATAAT---TATT--A-----A----A-T------C-------AT---TAGCAACC--TA---------GATATTGAACGTTCATAAGCAATAAATT-
gi|19876 : AGAAAATGAGACCC---TCGG-AAAAAC------TGTCAAAT-----------AG-A--A--ATGA------------CCAAAA---GTC-------------GTTTCC---------ATATC-------GTAATTGTATGTATT-TTTGTATATTTCAACGC---GATA--A-----AT---A-TCATTA-A-------ATCACTTGCAAAT--TT---------AACATTGAACGTTAATCAACAATAATTT-
gi|19877 : AAAAATAA-ACAA---TCTG-AAAAAC------TGTGAAAT-----------AG-A--A--ATGA------------CACAAA---ATC-------------GTTTCTGAAATAGTTA---C-------A-----GTATTTATTCTTTCTACATATCAACTCAATTATA--ATT---ATTAAA-T------C-------AT---TCGCAAAC--TA---------GACATTGAACGATCCTAGGCAATAAATT-
gi|19878 : AAAAGTAA-ACAA---TCTGAAAAA-C------TGTGAAAT-----------AT-A--A--ATGACACAAAATTGTTTCTGAA---GTA-------------GTT------------A---C-------A-----GTATTTATTCTTTCTACATATCAACAC------A--ATT---AT---A-T------C-------AT---TTGCAATC--TA---------GACATTGAATGTTCCTCGGCAATAACTT-
gi|19879 : AAAATAA-AGAA---ACTG-AAAA-AAAA---TGTGAAAAGACTTGGCGCAAA-G-TC--ATT-------------TCTGAA---ATC-------------GTT------------G---C-------A-----GAATTTATTCATT-TATATTTCAATGT---TATA--A-----AT---A-TC-----ATTAAATCAT---TTGCTAAC--TA---------GACATTGAATGTTCCTCAATAATAAGTTATAACATG
gi|19880 : AAATGA-GCAAATTTCAG-AAAA-TGCAAGTTGTAAAAA-----------AG-A--A--ATGA------------CAAAAA---GTT-------------GTT------------------------------GTATTTATTCTTTGTATATTTCAACAC---CATA--A-----AT---A-TCATTCAATC-----AT---TTGCAAAT--TT---------AACATTGAACGTTCATCAACAATAAATT-TA
Alignments
lowQualScore : 1 22222222 8888888888888 111111111111 4444444444444444444444444444 11111111
lowQualScore : 3 2 1 222 1 1 44444444 1 1 44 888888888888 222 4444444444444 666666666666 1 777777 5555555 1 2222222222222222222222222222 66666666 3333 22222222 0 2 1 0 1 1
lowQualScore : . . . ... . . ........ . . .. ............ ... ............. ............ . ...... ....... . ............................ ........ .... ........ . . . . . .
lowQualScore : 6 1 7 999 7 7 55555555 7 7 00 555555555555 999 2222222222222 222222222222 7 333333 4444444 7 1111111111111111111111111111 33333333 7777 66666666 5 7 0 9 0 6
consensus : TCCTGACGAGTGGTTTTTGTCTGCGGACGAGTGATTTT-TACCAGTAACTAGTCCGTCGGACGAGTAAACTTTTTGGCCGAGACCAAAAAATAA-ACAA---TCTG-AAA-AAC------TG-T-GAAAAAGA--AATGACACA------------AA---GTC--TT----AA---GTT------------A-CG-----G-------TATTTATTCTTTCTACATTT-CAACGCA-TTAT---A--A-----AT--------AT--------C----ATT--------TGCAAACTAGACATTGAACGTTCATCGGCGATAANTTTATCACGCAATT
Reference ( family-695 ) : TCCTGACGAGTGGTTTTTGTCTGCGGACGAGTGATTTT-TACCAGTAACTAGTCCGTCGGACGAGTAAACTTTTTGGCCGAGACCAAAAAATAA-ACAA---TCTG-AAA-A-C------TG-T-GAAAAAGA--AATGATACA------------AA---GTC-------------GTT------------A-CG-----G-------TATTTATTCTTTCTACATTT-CAACGC---TAT---A--A-----AT--------AT--------C----ATT--------TGCAAACTNGACATTGAACGTTCNTCGGCGATAANTTTATCACGCAATT
gi|19854 : TCCTGACGACTGGTTTTTGTCTGCGGACGAGTGATTTT-TGCCAGTAACTAGTCCGTCGGATGAGTAAACCTTTTGGCAGAGATCAAAAAATAA-ACAA---TCTG-AAA-A-T------TG-T-AAAAAAGGT-AATGATCCA------------AA---GTC-------------GTT------------A-CG-----G-------TATTTATTCTTTCTATATTT-CATTGC---TGT---A--A-----AT--------AT--------A----ATT--------TGTAAATTTGACATTTAACGATCATCAACGATAACTTTATCATGCAATT
gi|19855 : TCCTGACGACTGATTTTTGTCTGCGAACGAGTGATTTT-TACCAGTATCTAATCTGTCGGACAAGTAAACCTTTTGGCAGAGATAAAAAAATAA-ACAA---TCTG-AAA-A-C------TG-TAAAAAAAGT--TATGATCCA------------AA---GTC-------------ATT------------A-CA-----G-------TATTTATTCTTTCTATATTT-CATTGC---TGT---A--A-----AT--------AT--------A----ATC--------TGTAAATTTGAAATTTAACGATCATCAACGATAACTTTATCATGCAATT
gi|19856 : TCCTGATGACTGGTTTTTGTCTTAGGACGAGTGATTAT-TACCAGTAACTAGTCTGTCCGATGGGTAAACTTTTTGGCCGAGATCAAAAAATAA-ACTA---TCTA-AAATA-A------TG-T-AAAAAAAAGTAATGATCCA------------AA---GTC-------------GTT------------A-TG-----G-------TATTTATTCTTTCTATATTT-CATTGC---TGA---A--A-----AT--------AT--------C----ATT--------TGTAAATTTGATATTTAACGTTCATCAACGATAACTTTATCATGCAAT
gi|19857 : TCCTGACGAGTGGTTTTTGTCTGTGGACGAGTGATTTT-TACCAGTTACTAGACCATCGGATGAGTAAACTTTTTGATCAAGATTGAAAAATAA-ACAA---TCTG-AAA-A-C------TGTT-AAAAAAGA--AATGATACA------------AA---GTC-------------GTT------------A-CG-----G-------TATTTATTCTTTCT--ATTT---ACGT---TGTTGCA--A-----AT--------AT--------C----ATT--------TGTAAATTTGACATTTAACGTTCATCAACGATAACTTTATCATGCAATT
gi|19858 : TTCTGACGAGTGGTTTTTGTCTGCAGACGAGAGGTTTT-TACCAGTAACTAGTCAGTCTGACAAGTAAACTTTTTGGCCGAGATCGAAAAATAA-AC-A---TCTG-AAA-A-C------TG-T-AAAAAAGA--AACAATCCA------------AA---GTC-------------GTT------------A-CA-----G-------TATTTATTCTTTCTATATTT-CATTGC---TGC---A--A-----AT--------AT--------CATAAATT--------TGTAAATTTGACATTTAACGTTCATCAACAATAACTTAATCATGCAATT
gi|19859 : TCCTGACGAGTGGTTTTTGCCTGTGGACAAGTGGTTTT-TACCAGTAACTAGTCCGTCGGATGAGTAAACTTTTTGGCCGAGATCGAAAAATAA-ACAA---TCTG-AAA-A-C------TG-T-AAAAAAGA--CTTGATTTG------------AA---GTC-------------GTTTGTC--------A-CA-----G-------TATTTATTCTTTCTATATTT-CATTGC---TAG---A--A-----AT--------AT--------C----ATT--------TGTAAATTTGACATTTAATGTTCATCAATGGTAACTCTCTCATGCAATT
gi|19860 : TCCTGACAAGTGGTTTTTGTCTGCGGATGAGTAATTTT-TACCAGTAACCAGTCTATTGCACGAGTAAACTTTTTGGCCGAGATAAAAAAAAAA-ATAA---TCTG-AAA-A-A------T----------AA--AATGGTCCA------------AA---GTC-------------GTT------------A-TG-----G-------TATTTATTCTTTCTATATTT-AATTGC---TGT---A--A-----AT--------AT--------C----ATT--------TGTAAATTTGACATTTAACGTTCATCAGCGATAACTTTATAGTGCAATT
gi|19861 : TCCTGACGAGTGGGTTTTGTCTGCAGACGAGTGATTTTTTACCAGTTACTAGTCCGTCAGACGAGTAAACGTTTTGGCCAAGATCGAAAAAT-------------------A-C------TG-T-AAAAATAT--TTTTATCCA------------AA---GTC-------------GTT------------A-CG-----G-------TATTTATTCTTTCTATATTT-CATTGC---TCT---A--A-----AT--------AT--------C----ATT--------TG-AAACT------------TTCATCGATGATAACTTTATCATACAA
gi|19862 : TCCTAGC-AGTGGTTTTTGTCTGCGTACGAGTAATTTT-TACCAGTAACTAGTCTATTGGACCAGTAAACATTTTGGCCAAAATC
gi|19863 : TCGTAACGAATGGTTTCTGCTTGCAGATGAGTTATTTT-TATCAGTAACTAGTCTGTCAGACGAGTGAACTTT
gi|19864 : GCGGATGAGTGATTTT-C-CCAGTAAATAGTTCGCTGGAGGAGTAAACTTT
gi|19865 : CAAGACCAAAAA-TAA-ACAA---TCTG-AAA-AAC------TT-T-GAAAAAGA--AATGACACA------------AA---ATTGTTTCTGAAATG-GTT------------A-CA-----G-------TATTTATTCTTTCTACATTT-TAACGCAATTAT---A--ACT---ATTAA-----AT--------C----ATT--------TGCAAACTAGACATTGACCATTCCTCGGCAATAAG-TTATAACACAA
gi|19866 : tgaAGATCAAAAG-TAA-ACAA---TCTG-AAA-AAC------TG-T-GAAAAAGA--AATAATACA------------AA---TTCGTTTCTGAAATG-GTT------------A-CA-----G-------TATTTATTCTTTCTACATTT-CAACGCAATTAT---A--ATT---ATCAA-----AT--------C----ATT--------TGCAAATCAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19867 : AGACCAAAAG-TAA-ACAA---TCTG-AAA-AAC------TG-T-GAAAAAGA--AATAATACA------------AATTTGTTTCTGAAATG----GTT------------A-CA-----G-------TATTTATTCTTTCTACATTT-CAACGCAATTAT---A--ATT---ATCAA-----AT--------C----ATT--------TGCAAATTAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19868 : AGACCAAAAA-TAA-ACAA---TCTG-AAA-AAC------TG-C-GAAAAAGA--TATGACACA------------AA---ATC-------------GTT------------T-CT-----G-------AATTTATTCTTTCTACATAT-CGACGCAATTAT---A--ATTTTTAA--------AT--------C----ATT--------TGCAATGTAGACATTGAATGTTCCTCGACAATAAGTT
gi|19869 : AGACCAAAAGTTAA--CAA---TCTG-AAA-AAC------TG-T-GAAAAAGA--AATAATACA------------AA---ATTCGTTTCTGAAATGGTT------------A-CA-----G-------TATTTATTCTTTCTACATTT-CAACGC---AAT---A--A-----TT--------ATTATTAAACC----ATT--------TGCAAATTAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19870 : AGACCAAAAA-TAA-ACAA---TCTG-AAA-AAC------TG-T-GAAAAAGA--AATGACACA------------AA---ATCATTTCTGAAATT-GTT------------A-CA-----G-------TATTTATTCTTTCTACATTT-CAACACAATTAT---A--ATT---ATTAA-----AT--------C----ATT--------TGCAAACTAGACAT
gi|19871 : AGACCAAAA--TAA-ACAA---TCTG-AAA-AAT------TG-T-GAAAAAGA--AATGACACA------------AA---ATCATTTCTGAAATT-GTT------------A-CA-----G-------TATTTATTCTTTCTACATTT-CA
gi|19872 : AGACCAAAAA-TAA-ACAA---TCTGTAAA-A-C------TG-C-GAAAAAGA--AATTACACA------------AA---ATCATTTCTGAAATT-GTT------------A-CA-----G-------TATTTATTCTTTCTACATTT-CAACGCATTTAT---A--ATGGTTAA--------AT--------C----ATT--------TGCAAACTAGACATTGAACGTTCCTCGGCATTAAG-TTATAACACAA
gi|19873 : AGACCAAAAA-TAA-ACAA---TCTG-AAA-AAC------TG-C-GAAAAAGA--TATGATAAA------------AA---ATC-------------GTTTCTGAAATAGTTA-CA-----G-------AATTTATTCTTTCTACATGT-CAACGCAATTAT---A--ATT---ATTAA-----AT--------C----ATT--------TGCAAAGTAGACATAGAACGTTCCTCGGCAATAAG-TTATAACACAA
gi|19874 : AGACCAAAAA-TAA-ACAA---TCTG-AAA-AAC------TG-T-GAAATAGA--AATGACACA------------AA---ATT-------------GTT------------T-CT-----GAAATAGTTATTTATTCTTTCTACAATTATAAT-----TAT---T--A-----A---------AT--------C----ATT--------AGCAACCTAGATATTGAACGTTCATAAGCAATAAATT
gi|19875 : AGACCAAAAA-TAA-ACAA---TTTG-AAA-AAC------TG-T-GAAATAGA--AATGACACA------------AA---ATCGTTTCTGAAATA-GTT------------A-CA-----T-------TATTTATTATTTCTACAAAT-CAACGCAATTAT---AACA-----ATTAA-----AT--------C----ATT--------TGCAAACTAGACATTGAGCATTCATCGGCAATAAGTT
gi|19876 : AGAAAATGAGACCC---TCGG-AAA-AAC------TG-T-CAAATAGA--AATGACCAA------------AA---GTC-------------GTTTCCAT-------ATCGTAATTG-------TATGTATT-TTTGTATATTT-CAACGC---GAT---A--A-----AT--------AT--------C----ATTAAATCACTTGCAAATTTAACATTGAACGTTAATCAACAATAATTTTataacatg
gi|19877 : AAAAATAA-ACAA---TCTG-AAA-AAC------TG-T-GAAATAGA--AATGACACA------------AA---ATCGTTTCTGAAATA-GTT------------A-CA-----G-------TATTTATTCTTTCTACATAT-CAACTCAATTAT---A--ATT---ATTAA-----AT--------C----ATT--------CGCAAACTAGACATTGAACGATCCTAGGCAATAAATT
gi|19878 : AAAAGTAA-ACAA---TCTG-AAA-AAC------TG-T-GAAATATA--AATGACACAAAATTGTTTCTGAA---GTA-------------GTT------------A-CA-----G-------TATTTATTCTTTCTACATAT-CAACAC---AAT------T-----AT--------AT--------C----ATT--------TGCAATCTAGACATTGAATGTTCCTCGGCAATAACTT
gi|19879 : AAAATAA-AGAA---ACTG-AAA-A-AAAA---TG-T-GAAAA-GA--CTTGGCGCA------------AA---GTCATTTCTGAAATC-GTT------------G-CA-----G-------AATTTATTCATT-TATATTT-CAATGT---TAT---A--A-----AT--------AT--------C----ATTAAATCATTTGCTAACTAGACATTGAATGTTCCTCAATAATAAGTT
gi|19880 : AAATGA-GCAAATTTCAG-AAA-A-TGCAAGTTG-T-AAAAAAGA--AATGACAAA------------AA---GTT-------------GTT---------------------G-------TATTTATTCTTTGTATATTT-CAACAC---CAT---A--A-----ATATCATTCAAT--------C----ATT--------TGCAAATTTAACATTGAACGTTCATCAACAATAAATTTAataacatg
Alignments
lowQualScore : 1111111111111111111111111111111
lowQualScore : 0000000000000000000000000000000 444444444444444444444444444 11111111
lowQualScore : 3 9 1 222 3 44444 22 1 1 44 4444444444444444444444444444444 3 1 222222222222222222222222222 3333 66666666 22222222 0 3 1 0 1 1
lowQualScore : . . . ... . ..... .. . . .. ............................... . . ........................... .... ........ ........ . . . . . .
lowQualScore : 6 2 7 999 3 22222 33 7 7 00 8888888888888888888888888888888 1 7 888888888888888888888888888 7777 33333333 66666666 5 3 9 9 0 6
consensus : TCCTGACGAGTGGTTTTTGTCTGCGGACGAGTGATTTT-TACCAGTAACTAGTCCGTCGGACGAGTAAACTTTTTGGCCGAGACCAAAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAA---G------TC---T-T----A---A----GTTACGGTATTTATTCTTTCTACATTTCAACG-CA------A-TTATA--A-----AT---ATC----A--------TT--------TGCAAACTAGACATTGAACGTTCATCGGCGATAANTTTATCACGCAATT
Reference ( family-695 ) : TCCTGACGAGTGGTTTTTGTCTGCGGACGAGTGATTTT-TACCAGTAACTAGTCCGTCGGACGAGTAAACTTTTTGGCCGAGACCAAAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAA---G------TC---T-T----A---A----GTTACGGTATTTATTCTTTCTACATTTCAACG-C-------A-TTATA--A-----AT---ATC----A--------TT--------TGCAAACTAGACATTGAACGTTCATCGGCGATAANTTTATCACGCAATT
gi|19854 : TCCTGACGACTGGTTTTTGTCTGCGGACGAGTGATTTT-TGCCAGTAACTAGTCCGTCGGATGAGTAAACCTTTTGGCAGAGATCAAAAAATAA-ACAA---TCTG-AAA-----AT--TG-T-AAAAAAGGT-AATGATCCAAA---G------TC-------------------GTTACGGTATTTATTCTTTCTATATTTCATTG-C----------TGTA--A-----AT---ATA----A--------TT--------TGTAAATTTGACATTTAACGATCATCAACGATAACTTTATCATGCAATT
gi|19855 : TCCTGACGACTGATTTTTGTCTGCGAACGAGTGATTTT-TACCAGTATCTAATCTGTCGGACAAGTAAACCTTTTGGCAGAGATAAAAAAATAA-ACAA---TCTG-AAA-----AC--TG-TAAAAAAAGT--TATGATCCAAA---G------TC-------------------ATTACAGTATTTATTCTTTCTATATTTCATTG-C----------TGTA--A-----AT---ATA----A--------TC--------TGTAAATTTGAAATTTAACGATCATCAACGATAACTTTATCATGCAATT
gi|19856 : TCCTGATGACTGGTTTTTGTCTTAGGACGAGTGATTAT-TACCAGTAACTAGTCTGTCCGATGGGTAAACTTTTTGGCCGAGATCAAAAAATAA-ACTA---TCTAAAAT-----AA--TG-T-AAAAAAAAGTAATGATCCAAA---G------TC-------------------GTTATGGTATTTATTCTTTCTATATTTCATTG-C----------TGAA--A-----AT---ATC----A--------TT--------TGTAAATTTGATATTTAACGTTCATCAACGATAACTTTATCATGCAAT
gi|19857 : TCCTGACGAGTGGTTTTTGTCTGTGGACGAGTGATTTT-TACCAGTTACTAGACCATCGGATGAGTAAACTTTTTGATCAAGATTGAAAAATAA-ACAA---TCTG-AAA-----AC--TGTT-AAAAAAGA--AATGATACAAA---G------TC-------------------GTTACGGTATTTATTCTTTCT--ATTT--ACGTT-------G-TTGCA--A-----AT---ATC----A--------TT--------TGTAAATTTGACATTTAACGTTCATCAACGATAACTTTATCATGCAATT
gi|19858 : TTCTGACGAGTGGTTTTTGTCTGCAGACGAGAGGTTTT-TACCAGTAACTAGTCAGTCTGACAAGTAAACTTTTTGGCCGAGATCGAAAAATAA-AC-A---TCTG-AAA-----AC--TG-T-AAAAAAGA--AACAATCCAAA---G------TC-------------------GTTACAGTATTTATTCTTTCTATATTTCATTG-C----------TGCA--A-----AT---ATCATAAA--------TT--------TGTAAATTTGACATTTAACGTTCATCAACAATAACTTAATCATGCAATT
gi|19859 : TCCTGACGAGTGGTTTTTGCCTGTGGACAAGTGGTTTT-TACCAGTAACTAGTCCGTCGGATGAGTAAACTTTTTGGCCGAGATCGAAAAATAA-ACAA---TCTG-AAA-----AC--TG-T-AAAAAAGA--CTTGATTTGAA---G------TC---G-T----T---T----GTCACAGTATTTATTCTTTCTATATTTCATTG-C----------TAGA--A-----AT---ATC----A--------TT--------TGTAAATTTGACATTTAATGTTCATCAATGGTAACTCTCTCATGCAATT
gi|19860 : TCCTGACAAGTGGTTTTTGTCTGCGGATGAGTAATTTT-TACCAGTAACCAGTCTATTGCACGAGTAAACTTTTTGGCCGAGATAAAAAAAAAA-ATAA---TCTGAAAA-----AT-------------AA--AATGGTCCAAA---G------TC-------------------GTTATGGTATTTATTCTTTCTATATTTAATTG-C----------TGTA--A-----AT---ATC----A--------TT--------TGTAAATTTGACATTTAACGTTCATCAGCGATAACTTTATAGTGCAATT
gi|19861 : TCCTGACGAGTGGGTTTTGTCTGCAGACGAGTGATTTTTTACCAGTTACTAGTCCGTCAGACGAGTAAACGTTTTGGCCAAGATCGAAAAAT-----------------------AC--TG-T-AAAAATAT--TTTTATCCAAA---G------TC-------------------GTTACGGTATTTATTCTTTCTATATTTCATTG-C----------TCTA--A-----AT---ATC----A--------TT--------TG-AAACT------------TTCATCGATGATAACTTTATCATACAA
gi|19862 : TCCTAGC-AGTGGTTTTTGTCTGCGTACGAGTAATTTT-TACCAGTAACTAGTCTATTGGACCAGTAAACATTTTGGCCAAAATC
gi|19863 : TCGTAACGAATGGTTTCTGCTTGCAGATGAGTTATTTT-TATCAGTAACTAGTCTGTCAGACGAGTGAACTTT
gi|19864 : GCGGATGAGTGATTTT-C-CCAGTAAATAGTTCGCTGGAGGAGTAAACTTT
gi|19865 : CAAGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TT-T-GAAAAAGA--AATGACACAAA---ATTGTT-TC---T-G----A---AATG-GTTACAGTATTTATTCTTTCTACATTTTAACG-CA------A-TTATA--ACT---ATTAAATC----A--------TT--------TGCAAACTAGACATTGACCATTCCTCGGCAATAAG-TTATAACACAA
gi|19866 : tgaAGATCAAAAG-TAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATAATACAAATTCGTT----TC---T-G----A---AATG-GTTACAGTATTTATTCTTTCTACATTTCAACG-CA------A-TTATA--ATT---ATCAAATC----A--------TT--------TGCAAATCAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19867 : AGACCAAAAG-TAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATAATACAAATTTGTT----TC---T-G----A---AATG-GTTACAGTATTTATTCTTTCTACATTTCAACG-CA------A-TTATA--ATT---ATCAAATC----A--------TT--------TGCAAATTAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19868 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-C-GAAAAAGA--TATGACACAAA---A------TC-------------------GTTTCTGAATTTATTCTTTCTACATATCGACG-CA------A-TTATA--ATTTTTAA---ATC----A--------TT--------TGCAATGTAGACATTGAATGTTCCTCGACAATAAGTT
gi|19869 : AGACCAAAAGTTAA--CAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATAATACAAA---ATTCGTTTC---T-G----A---AATG-GTTACAGTATTTATTCTTTCTACATTTCAACG-CAATAATTA-TTATT--A-----A----ACC----A--------TT--------TGCAAATTAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19870 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAA---A------TCA--T-TTCTGA---AATT-GTTACAGTATTTATTCTTTCTACATTTCAACA-CA------A-TTATA--ATT---ATTAAATC----A--------TT--------TGCAAACTAGACAT
gi|19871 : AGACCAAAA--TAA-ACAA---TCTGAAAA-----AT--TG-T-GAAAAAGA--AATGACACAAA---A------TCA--T-TTCTGA---AATT-GTTACAGTATTTATTCTTTCTACATTTCA
gi|19872 : AGACCAAAA-ATAA-ACAA---TCTGTAAA-----AC--TG-C-GAAAAAGA--AATTACACAAA---A------TCA--T-TTCTGA---AATT-GTTACAGTATTTATTCTTTCTACATTTCAACG-C-------ATTTATA--ATGGTTAA---ATC----A--------TT--------TGCAAACTAGACATTGAACGTTCCTCGGCATTAAG-TTATAACACAA
gi|19873 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-C-GAAAAAGA--TATGATAAAAA---A------TCG--T-TTCTGAAATA----GTTACAGAATTTATTCTTTCTACATGTCAACG-CA------A-TTATA--ATT---ATTAAATC----A--------TT--------TGCAAAGTAGACATAGAACGTTCCTCGGCAATAAG-TTATAACACAA
gi|19874 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAATAGA--AATGACACAAAATTG------TT---TCT----G---A----AATA-GTTATTTATTCTTTCTACAATTATA-----------A-TTATT--A-----A----ATC----A--------TT--------AGCAACCTAGATATTGAACGTTCATAAGCAATAAATT
gi|19875 : AGACCAAAA-ATAA-ACAA---TTTGAAAA-----AC--TG-T-GAAATAGA--AATGACACAAA---A------TCG--T-TTCTGAAATA----GTTACATTATTTATTATTTCTACAAATCAACG-CA------A-TTATAACA-----ATTAAATC----A--------TT--------TGCAAACTAGACATTGAGCATTCATCGGCAATAAGTT
gi|19876 : AGAAAATGAGACCC---TCGGAAAA-----AC--TG-T-CAAATAGA--AATGACCAAAA---G------TCGTTT-C----C---ATATCGTAATTGTATGTATT-TTTGTATATTTCAACG-C-------G---ATA--A-----AT---ATC----A--------TTAAATCACTTGCAAATTTAACATTGAACGTTAATCAACAATAATTTTataacatg
gi|19877 : AAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAATAGA--AATGACACAAA---A------TCG--T-TTCTGAAATA----GTTACAGTATTTATTCTTTCTACATATCAACT-CA------A-TTATA--ATT---ATTAAATC----A--------TT--------CGCAAACTAGACATTGAACGATCCTAGGCAATAAATT
gi|19878 : AAAAGTAA-ACAA---TCTGAAAA-----AC--TG-T-GAAATATA--AATGACACAAA---ATTGTT-TC---T-G----AAGTA----GTTACAGTATTTATTCTTTCTACATATCAACA-CA------A-TT-----------AT---ATC----A--------TT--------TGCAATCTAGACATTGAATGTTCCTCGGCAATAACTT
gi|19879 : AAAATAA-AGAA---ACTGAAAA-----AAAATG-T-GAAAA-GA--CTTGGCGCAAA---G------TCAT-T-TCTGAA---ATC--GTTGCAGAATTTATTCATT-TATATTTCAATG-----------TTATA--A-----AT---ATC----A--------TTAAATCATTTGCTAACTAGACATTGAATGTTCCTCAATAATAAGTT
gi|19880 : AAATGA-GCAAATTTCAGAAAATGCAAGT--TG-T-AAAAAAGA--AATGACAAAAA---G------TT-------------------GTT---GTATTTATTCTTTGTATATTTCAACA-C----------CATA--A-----AT---ATC----ATTCAATCATT--------TGCAAATTTAACATTGAACGTTCATCAACAATAAATTTAataacatg
Alignments
lowQualScore : 111111111111111111111111111111111
lowQualScore : 000000000000000000000000000000000 11 3333333333 11111111
lowQualScore : 3 9 1 222 3 44444 22 1 1 44 444444444444444444444444444444444 3 33 22 1111111111 44444 3333 66666666 22222222 0 3 1 0 1 1
lowQualScore : . . . ... . ..... .. . . .. ................................. . .. .. .......... ..... .... ........ ........ . . . . . .
lowQualScore : 6 2 7 999 3 22222 33 7 7 00 888888888888888888888888888888888 1 00 44 9999999999 33333 7777 33333333 66666666 5 3 9 9 0 6
consensus : TCCTGACGAGTGGTTTTTGTCTGCGGACGAGTGATTTT-TACCAGTAACTAGTCCGTCGGACGAGTAAACTTTTTGGCCGAGACCAAAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAA---G------T--C---T-T----A---A----GTTACGGTATTTATTCTTTCTACATTTCAACGCAATTATA--A-----AT---AT-----C----A--------TT--------TGCAAACTAGACATTGAACGTTCATCGGCGATAANTTTATCACGCAATT
Reference ( family-695 ) : TCCTGACGAGTGGTTTTTGTCTGCGGACGAGTGATTTT-TACCAGTAACTAGTCCGTCGGACGAGTAAACTTTTTGGCCGAGACCAAAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAA---G------T--C---T-T----A---A----GTTACGGTATTTATTCTTTCTACATTTCAACGCAATTATA--A-----AT---AT-----C----A--------TT--------TGCAAACTAGACATTGAACGTTCATCGGCGATAANTTTATCACGCAATT
gi|19854 : TCCTGACGACTGGTTTTTGTCTGCGGACGAGTGATTTT-TGCCAGTAACTAGTCCGTCGGATGAGTAAACCTTTTGGCAGAGATCAAAAAATAA-ACAA---TCTG-AAA-----AT--TG-T-AAAAAAGGT-AATGATCCAAA---G------T--C-------------------GTTACGGTATTTATTCTTTCTATATTTCATTGC---TGTA--A-----AT---AT-----A----A--------TT--------TGTAAATTTGACATTTAACGATCATCAACGATAACTTTATCATGCAATT
gi|19855 : TCCTGACGACTGATTTTTGTCTGCGAACGAGTGATTTT-TACCAGTATCTAATCTGTCGGACAAGTAAACCTTTTGGCAGAGATAAAAAAATAA-ACAA---TCTG-AAA-----AC--TG-TAAAAAAAGT--TATGATCCAAA---G------T--C-------------------ATTACAGTATTTATTCTTTCTATATTTCATTGC---TGTA--A-----AT---AT-----A----A--------TC--------TGTAAATTTGAAATTTAACGATCATCAACGATAACTTTATCATGCAATT
gi|19856 : TCCTGATGACTGGTTTTTGTCTTAGGACGAGTGATTAT-TACCAGTAACTAGTCTGTCCGATGGGTAAACTTTTTGGCCGAGATCAAAAAATAA-ACTA---TCTAAAAT-----AA--TG-T-AAAAAAAAGTAATGATCCAAA---G------T--C-------------------GTTATGGTATTTATTCTTTCTATATTTCATTGC---TGAA--A-----AT---AT-----C----A--------TT--------TGTAAATTTGATATTTAACGTTCATCAACGATAACTTTATCATGCAAT
gi|19857 : TCCTGACGAGTGGTTTTTGTCTGTGGACGAGTGATTTT-TACCAGTTACTAGACCATCGGATGAGTAAACTTTTTGATCAAGATTGAAAAATAA-ACAA---TCTG-AAA-----AC--TGTT-AAAAAAGA--AATGATACAAA---G------T--C-------------------GTTACGGTATTTATTCTTTCT--ATTT--ACGTTGTTGCA--A-----AT---AT-----C----A--------TT--------TGTAAATTTGACATTTAACGTTCATCAACGATAACTTTATCATGCAATT
gi|19858 : TTCTGACGAGTGGTTTTTGTCTGCAGACGAGAGGTTTT-TACCAGTAACTAGTCAGTCTGACAAGTAAACTTTTTGGCCGAGATCGAAAAATAA-AC-A---TCTG-AAA-----AC--TG-T-AAAAAAGA--AACAATCCAAA---G------T--C-------------------GTTACAGTATTTATTCTTTCTATATTTCATTGC---TGCA--A-----AT---AT-----CATAAA--------TT--------TGTAAATTTGACATTTAACGTTCATCAACAATAACTTAATCATGCAATT
gi|19859 : TCCTGACGAGTGGTTTTTGCCTGTGGACAAGTGGTTTT-TACCAGTAACTAGTCCGTCGGATGAGTAAACTTTTTGGCCGAGATCGAAAAATAA-ACAA---TCTG-AAA-----AC--TG-T-AAAAAAGA--CTTGATTTGAA---G------T--C---G-T----T---T----GTCACAGTATTTATTCTTTCTATATTTCATTGC---TAGA--A-----AT---AT-----C----A--------TT--------TGTAAATTTGACATTTAATGTTCATCAATGGTAACTCTCTCATGCAATT
gi|19860 : TCCTGACAAGTGGTTTTTGTCTGCGGATGAGTAATTTT-TACCAGTAACCAGTCTATTGCACGAGTAAACTTTTTGGCCGAGATAAAAAAAAAA-ATAA---TCTGAAAA-----AT-------------AA--AATGGTCCAAA---G------T--C-------------------GTTATGGTATTTATTCTTTCTATATTTAATTGC---TGTA--A-----AT---AT-----C----A--------TT--------TGTAAATTTGACATTTAACGTTCATCAGCGATAACTTTATAGTGCAATT
gi|19861 : TCCTGACGAGTGGGTTTTGTCTGCAGACGAGTGATTTTTTACCAGTTACTAGTCCGTCAGACGAGTAAACGTTTTGGCCAAGATCGAAAAAT-----------------------AC--TG-T-AAAAATAT--TTTTATCCAAA---G------T--C-------------------GTTACGGTATTTATTCTTTCTATATTTCATTGC---TCTA--A-----AT---AT-----C----A--------TT--------TG-AAACT------------TTCATCGATGATAACTTTATCATACAA
gi|19862 : TCCTAGC-AGTGGTTTTTGTCTGCGTACGAGTAATTTT-TACCAGTAACTAGTCTATTGGACCAGTAAACATTTTGGCCAAAATC
gi|19863 : TCGTAACGAATGGTTTCTGCTTGCAGATGAGTTATTTT-TATCAGTAACTAGTCTGTCAGACGAGTGAACTTT
gi|19864 : GCGGATGAGTGATTTT-C-CCAGTAAATAGTTCGCTGGAGGAGTAAACTTT
gi|19865 : CAAGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TT-T-GAAAAAGA--AATGACACAAA---ATTGTT-T--C---T-G----A---AATG-GTTACAGTATTTATTCTTTCTACATTTTAACGCAATTATA--ACT---ATTAAAT-----C----A--------TT--------TGCAAACTAGACATTGACCATTCCTCGGCAATAAG-TTATAACACAA
gi|19866 : tgaAGATCAAAAG-TAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATAATACAAATTCG------TTTC---T-G----A---AATG-GTTACAGTATTTATTCTTTCTACATTTCAACGCAATTATA--ATT---ATCAAAT-----C----A--------TT--------TGCAAATCAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19867 : AGACCAAAAG-TAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATAATACAAATTTG------TTTC---T-G----A---AATG-GTTACAGTATTTATTCTTTCTACATTTCAACGCAATTATA--ATT---ATCAAAT-----C----A--------TT--------TGCAAATTAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19868 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-C-GAAAAAGA--TATGACACAAA---A------T--C-------------------GTTTCTGAATTTATTCTTTCTACATATCGACGCAATTATA--ATTTTTAA---AT-----C----A--------TT--------TGCAATGTAGACATTGAATGTTCCTCGACAATAAGTT
gi|19869 : AGACCAAAAGTTAA--CAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATAATACAAA---ATTCGTTT--C---T-G----A---AATG-GTTACAGTATTTATTCTTTCTACATTTCAACGCAATAATT--A-----TT---ATTAAACC----A--------TT--------TGCAAATTAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19870 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAA---A------T--CA--T-TTCTGA---AATT-GTTACAGTATTTATTCTTTCTACATTTCAACACAATTATA--ATT---ATTAAAT-----C----A--------TT--------TGCAAACTAGACAT
gi|19871 : AGACCAAAA--TAA-ACAA---TCTGAAAA-----AT--TG-T-GAAAAAGA--AATGACACAAA---A------T--CA--T-TTCTGA---AATT-GTTACAGTATTTATTCTTTCTACATTTCA
gi|19872 : AGACCAAAA-ATAA-ACAA---TCTGTAAA-----AC--TG-C-GAAAAAGA--AATTACACAAA---A------T--CA--T-TTCTGA---AATT-GTTACAGTATTTATTCTTTCTACATTTCAACGCATTTATA--ATGGTTAA---AT-----C----A--------TT--------TGCAAACTAGACATTGAACGTTCCTCGGCATTAAG-TTATAACACAA
gi|19873 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-C-GAAAAAGA--TATGATAAAAA---A------T--CG--T-TTCTGAAATA----GTTACAGAATTTATTCTTTCTACATGTCAACGCAATTATA--ATT---ATTAAAT-----C----A--------TT--------TGCAAAGTAGACATAGAACGTTCCTCGGCAATAAG-TTATAACACAA
gi|19874 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAATAGA--AATGACACAAAATTG------T--T---TCT----G---A----AATA-GTTATTTATTCTTTCTACAATT----ATAATTATT--A-----A----AT-----C----A--------TT--------AGCAACCTAGATATTGAACGTTCATAAGCAATAAATT
gi|19875 : AGACCAAAA-ATAA-ACAA---TTTGAAAA-----AC--TG-T-GAAATAGA--AATGACACAAA---A------T--CG--T-TTCTGAAATA----GTTACATTATTTATTATTTCTACAAATCAACGCAATTATAACA-----ATTAAAT-----C----A--------TT--------TGCAAACTAGACATTGAGCATTCATCGGCAATAAGTT
gi|19876 : AGAAAATGAGACCC---TCGGAAAA-----AC--TG-T-CAAATAGA--AATGACCAAAA---G------T--CGTTT-C----C---ATATCGTAATTGTATGTATT-TTTGTATATTTCAACGCGAT---A--A-----AT---AT-----C----A--------TTAAATCACTTGCAAATTTAACATTGAACGTTAATCAACAATAATTTTataacatg
gi|19877 : AAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAATAGA--AATGACACAAA---A------T--CG--T-TTCTGAAATA----GTTACAGTATTTATTCTTTCTACATATCAACTCAATTATA--ATT---ATTAAAT-----C----A--------TT--------CGCAAACTAGACATTGAACGATCCTAGGCAATAAATT
gi|19878 : AAAAGTAA-ACAA---TCTGAAAA-----AC--TG-T-GAAATATA--AATGACACAAA---ATTGTT-T--C---T-G----AAGTA----GTTACAGTATTTATTCTTTCTACATATCAACACAATT-----------AT---AT-----C----A--------TT--------TGCAATCTAGACATTGAATGTTCCTCGGCAATAACTT
gi|19879 : AAAATAA-AGAA---ACTGAAAA-----AAAATG-T-GAAAA-GA--CTTGGCGCAAA---G------T--CAT-T-TCTGAA---ATC--GTTGCAGAATTTATTCATT-TATATTTCAATG---TTATA--A-----AT---AT-----C----A--------TTAAATCATTTGCTAACTAGACATTGAATGTTCCTCAATAATAAGTT
gi|19880 : AAATGA-GCAAATTTCAGAAAATGCAAGT--TG-T-AAAAAAGA--AATGACAAAAA---G------T--T-------------------GTT---GTATTTATTCTTTGTATATTTCAACAC---CATA--A-----AT---AT-----C----ATTCAATCATT--------TGCAAATTTAACATTGAACGTTCATCAACAATAAATTTAataacatg
Alignments
lowQualScore : 111111111111111111111111111111111
lowQualScore : 000000000000000000000000000000000 11 3333333333 11111111
lowQualScore : 3 9 1 222 3 44444 22 1 1 44 444444444444444444444444444444444 3 33 22 1111111111 44444 3333 66666666 22222222 0 3 1 0 1 1
lowQualScore : . . . ... . ..... .. . . .. ................................. . .. .. .......... ..... .... ........ ........ . . . . . .
lowQualScore : 6 2 7 999 3 22222 33 7 7 00 888888888888888888888888888888888 1 00 44 9999999999 33333 7777 33333333 66666666 5 3 9 9 0 6
consensus : TCCTGACGAGTGGTTTTTGTCTGCGGACGAGTGATTTT-TACCAGTAACTAGTCCGTCGGACGAGTAAACTTTTTGGCCGAGACCAAAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAA---G------T--C---T-T----A---A----GTTACGGTATTTATTCTTTCTACATTTCAACGCAATTATA--A-----AT---AT-----C----A--------TT--------TGCAAACTAGACATTGAACGTTCATCGGCGATAANTTTATCACGCAATT
Reference ( family-695 ) : TCCTGACGAGTGGTTTTTGTCTGCGGACGAGTGATTTT-TACCAGTAACTAGTCCGTCGGACGAGTAAACTTTTTGGCCGAGACCAAAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAA---G------T--C---T-T----A---A----GTTACGGTATTTATTCTTTCTACATTTCAACGCAATTATA--A-----AT---AT-----C----A--------TT--------TGCAAACTAGACATTGAACGTTCATCGGCGATAANTTTATCACGCAATT
gi|19854 : TCCTGACGACTGGTTTTTGTCTGCGGACGAGTGATTTT-TGCCAGTAACTAGTCCGTCGGATGAGTAAACCTTTTGGCAGAGATCAAAAAATAA-ACAA---TCTG-AAA-----AT--TG-T-AAAAAAGGT-AATGATCCAAA---G------T--C-------------------GTTACGGTATTTATTCTTTCTATATTTCATTGC---TGTA--A-----AT---AT-----A----A--------TT--------TGTAAATTTGACATTTAACGATCATCAACGATAACTTTATCATGCAATT
gi|19855 : TCCTGACGACTGATTTTTGTCTGCGAACGAGTGATTTT-TACCAGTATCTAATCTGTCGGACAAGTAAACCTTTTGGCAGAGATAAAAAAATAA-ACAA---TCTG-AAA-----AC--TG-TAAAAAAAGT--TATGATCCAAA---G------T--C-------------------ATTACAGTATTTATTCTTTCTATATTTCATTGC---TGTA--A-----AT---AT-----A----A--------TC--------TGTAAATTTGAAATTTAACGATCATCAACGATAACTTTATCATGCAATT
gi|19856 : TCCTGATGACTGGTTTTTGTCTTAGGACGAGTGATTAT-TACCAGTAACTAGTCTGTCCGATGGGTAAACTTTTTGGCCGAGATCAAAAAATAA-ACTA---TCTAAAAT-----AA--TG-T-AAAAAAAAGTAATGATCCAAA---G------T--C-------------------GTTATGGTATTTATTCTTTCTATATTTCATTGC---TGAA--A-----AT---AT-----C----A--------TT--------TGTAAATTTGATATTTAACGTTCATCAACGATAACTTTATCATGCAAT
gi|19857 : TCCTGACGAGTGGTTTTTGTCTGTGGACGAGTGATTTT-TACCAGTTACTAGACCATCGGATGAGTAAACTTTTTGATCAAGATTGAAAAATAA-ACAA---TCTG-AAA-----AC--TGTT-AAAAAAGA--AATGATACAAA---G------T--C-------------------GTTACGGTATTTATTCTTTCT--ATTT--ACGTTGTTGCA--A-----AT---AT-----C----A--------TT--------TGTAAATTTGACATTTAACGTTCATCAACGATAACTTTATCATGCAATT
gi|19858 : TTCTGACGAGTGGTTTTTGTCTGCAGACGAGAGGTTTT-TACCAGTAACTAGTCAGTCTGACAAGTAAACTTTTTGGCCGAGATCGAAAAATAA-AC-A---TCTG-AAA-----AC--TG-T-AAAAAAGA--AACAATCCAAA---G------T--C-------------------GTTACAGTATTTATTCTTTCTATATTTCATTGC---TGCA--A-----AT---AT-----CATAAA--------TT--------TGTAAATTTGACATTTAACGTTCATCAACAATAACTTAATCATGCAATT
gi|19859 : TCCTGACGAGTGGTTTTTGCCTGTGGACAAGTGGTTTT-TACCAGTAACTAGTCCGTCGGATGAGTAAACTTTTTGGCCGAGATCGAAAAATAA-ACAA---TCTG-AAA-----AC--TG-T-AAAAAAGA--CTTGATTTGAA---G------T--C---G-T----T---T----GTCACAGTATTTATTCTTTCTATATTTCATTGC---TAGA--A-----AT---AT-----C----A--------TT--------TGTAAATTTGACATTTAATGTTCATCAATGGTAACTCTCTCATGCAATT
gi|19860 : TCCTGACAAGTGGTTTTTGTCTGCGGATGAGTAATTTT-TACCAGTAACCAGTCTATTGCACGAGTAAACTTTTTGGCCGAGATAAAAAAAAAA-ATAA---TCTGAAAA-----AT-------------AA--AATGGTCCAAA---G------T--C-------------------GTTATGGTATTTATTCTTTCTATATTTAATTGC---TGTA--A-----AT---AT-----C----A--------TT--------TGTAAATTTGACATTTAACGTTCATCAGCGATAACTTTATAGTGCAATT
gi|19861 : TCCTGACGAGTGGGTTTTGTCTGCAGACGAGTGATTTTTTACCAGTTACTAGTCCGTCAGACGAGTAAACGTTTTGGCCAAGATCGAAAAAT-----------------------AC--TG-T-AAAAATAT--TTTTATCCAAA---G------T--C-------------------GTTACGGTATTTATTCTTTCTATATTTCATTGC---TCTA--A-----AT---AT-----C----A--------TT--------TG-AAACT------------TTCATCGATGATAACTTTATCATACAA
gi|19862 : TCCTAGC-AGTGGTTTTTGTCTGCGTACGAGTAATTTT-TACCAGTAACTAGTCTATTGGACCAGTAAACATTTTGGCCAAAATC
gi|19863 : TCGTAACGAATGGTTTCTGCTTGCAGATGAGTTATTTT-TATCAGTAACTAGTCTGTCAGACGAGTGAACTTT
gi|19864 : GCGGATGAGTGATTTT-C-CCAGTAAATAGTTCGCTGGAGGAGTAAACTTT
gi|19865 : CAAGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TT-T-GAAAAAGA--AATGACACAAA---ATTGTT-T--C---T-G----A---AATG-GTTACAGTATTTATTCTTTCTACATTTTAACGCAATTATA--ACT---ATTAAAT-----C----A--------TT--------TGCAAACTAGACATTGACCATTCCTCGGCAATAAG-TTATAACACAA
gi|19866 : tgaAGATCAAAAG-TAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATAATACAAATTCG------TTTC---T-G----A---AATG-GTTACAGTATTTATTCTTTCTACATTTCAACGCAATTATA--ATT---ATCAAAT-----C----A--------TT--------TGCAAATCAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19867 : AGACCAAAAG-TAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATAATACAAATTTG------TTTC---T-G----A---AATG-GTTACAGTATTTATTCTTTCTACATTTCAACGCAATTATA--ATT---ATCAAAT-----C----A--------TT--------TGCAAATTAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19868 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-C-GAAAAAGA--TATGACACAAA---A------T--C-------------------GTTTCTGAATTTATTCTTTCTACATATCGACGCAATTATA--ATTTTTAA---AT-----C----A--------TT--------TGCAATGTAGACATTGAATGTTCCTCGACAATAAGTT
gi|19869 : AGACCAAAAGTTAA--CAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATAATACAAA---ATTCGTTT--C---T-G----A---AATG-GTTACAGTATTTATTCTTTCTACATTTCAACGCAATAATT--A-----TT---ATTAAACC----A--------TT--------TGCAAATTAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19870 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAA---A------T--CA--T-TTCTGA---AATT-GTTACAGTATTTATTCTTTCTACATTTCAACACAATTATA--ATT---ATTAAAT-----C----A--------TT--------TGCAAACTAGACAT
gi|19871 : AGACCAAAA--TAA-ACAA---TCTGAAAA-----AT--TG-T-GAAAAAGA--AATGACACAAA---A------T--CA--T-TTCTGA---AATT-GTTACAGTATTTATTCTTTCTACATTTCA
gi|19872 : AGACCAAAA-ATAA-ACAA---TCTGTAAA-----AC--TG-C-GAAAAAGA--AATTACACAAA---A------T--CA--T-TTCTGA---AATT-GTTACAGTATTTATTCTTTCTACATTTCAACGCATTTATA--ATGGTTAA---AT-----C----A--------TT--------TGCAAACTAGACATTGAACGTTCCTCGGCATTAAG-TTATAACACAA
gi|19873 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-C-GAAAAAGA--TATGATAAAAA---A------T--CG--T-TTCTGAAATA----GTTACAGAATTTATTCTTTCTACATGTCAACGCAATTATA--ATT---ATTAAAT-----C----A--------TT--------TGCAAAGTAGACATAGAACGTTCCTCGGCAATAAG-TTATAACACAA
gi|19874 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAATAGA--AATGACACAAAATTG------T--T---TCT----G---A----AATA-GTTATTTATTCTTTCTACAATT----ATAATTATT--A-----A----AT-----C----A--------TT--------AGCAACCTAGATATTGAACGTTCATAAGCAATAAATT
gi|19875 : AGACCAAAA-ATAA-ACAA---TTTGAAAA-----AC--TG-T-GAAATAGA--AATGACACAAA---A------T--CG--T-TTCTGAAATA----GTTACATTATTTATTATTTCTACAAATCAACGCAATTATAACA-----ATTAAAT-----C----A--------TT--------TGCAAACTAGACATTGAGCATTCATCGGCAATAAGTT
gi|19876 : AGAAAATGAGACCC---TCGGAAAA-----AC--TG-T-CAAATAGA--AATGACCAAAA---G------T--CGTTT-C----C---ATATCGTAATTGTATGTATT-TTTGTATATTTCAACGCGAT---A--A-----AT---AT-----C----A--------TTAAATCACTTGCAAATTTAACATTGAACGTTAATCAACAATAATTTTataacatg
gi|19877 : AAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAATAGA--AATGACACAAA---A------T--CG--T-TTCTGAAATA----GTTACAGTATTTATTCTTTCTACATATCAACTCAATTATA--ATT---ATTAAAT-----C----A--------TT--------CGCAAACTAGACATTGAACGATCCTAGGCAATAAATT
gi|19878 : AAAAGTAA-ACAA---TCTGAAAA-----AC--TG-T-GAAATATA--AATGACACAAA---ATTGTT-T--C---T-G----AAGTA----GTTACAGTATTTATTCTTTCTACATATCAACACAATT-----------AT---AT-----C----A--------TT--------TGCAATCTAGACATTGAATGTTCCTCGGCAATAACTT
gi|19879 : AAAATAA-AGAA---ACTGAAAA-----AAAATG-T-GAAAA-GA--CTTGGCGCAAA---G------T--CAT-T-TCTGAA---ATC--GTTGCAGAATTTATTCATT-TATATTTCAATG---TTATA--A-----AT---AT-----C----A--------TTAAATCATTTGCTAACTAGACATTGAATGTTCCTCAATAATAAGTT
gi|19880 : AAATGA-GCAAATTTCAGAAAATGCAAGT--TG-T-AAAAAAGA--AATGACAAAAA---G------T--T-------------------GTT---GTATTTATTCTTTGTATATTTCAACAC---CATA--A-----AT---AT-----C----ATTCAATCATT--------TGCAAATTTAACATTGAACGTTCATCAACAATAAATTTAataacatg
blockSeqs : T A G ATT A TGCAA AA T A GT ATTCGTTTCTGAAATG A TG AC CTATTAA TAAAC ATAA TTCAATCA AAATCACT T A C T
blockSeqs : . A . . A . . . . . ATTGTTTCTGAAATG G AA . TTATCAA . . . AAATCATT T A C T
blockSeqs : . A . . A . . . . . TTCGTTTCTGAAATG G AA . TTATCAA . . . . T A C T
blockSeqs : . A . . A . . . . . TTTGTTTCTGAAATG A AA . TTTTTAA . . . . T A C T
blockSeqs : . A . . A . . . . . ATCATTTCTGAAATT A AA . TTATTAA . . . . T A C T
blockSeqs : . A . . A . . . . . ATCATTTCTGAAATT G AA . TGGTTAA . . . . T A C T
blockSeqs : . A . . A . . . . . ATCATTTCTGAAATT G AA . TTATTAA . . . . A A C T
blockSeqs : . G . . A . . . . . ATCGTTTCTGAAATA A AT . TTATTAA . . . . A C G C
blockSeqs : . G . . A . . . . . ATCGTTTCTGAAATA A AA . ATTAA . . . . A C G C
blockSeqs : . G . . T . . . . . ATCGTTTCTGAAATA A AA . AT . . . . A C G C
blockSeqs : A . . A . . . . . ATTGTTTCTGAAGTA T AA . AT . . . . A C G
blockSeqs : A . . A . . . . . GTCATTTCTGAAATC A GA . AT . . . . A C G
blockSeqs : A . . A . . . . . GTCGTTTCCATATC A AA . AT . . . . A C G
blockSeqs : A . . A . . . . . ATTGTTTCTGA A AA . AT . . . . A C G
blockSeqs : A . . A . . . . . GTCGTTT A . . AT . . . . A A A
blockSeqs : . . . A . . . . . GTC A . . AT . . . . A A G
blockSeqs : . . . A . . . . . GTC G . . TT . . . . T A T
blockSeqs : . . . A . . . . . GTC A . . AT . . . . A C A
blockSeqs : . . . . . . . . . GTC T . . AT . . . . A C C
blockSeqs : . . . . . . . . . GTC A . . AT . . . . A C G
blockSeqs : . . . . . . . . . GTC A . . AT . . . . T A A
blockSeqs : . . . . . . . . . ATC A . . A . . . . .
blockSeqs : . . . . . . . . . GTT .
blockSeqCons : ** GTCGTTTCTGAAAT******************* AA
originalCons : TCCTGACGAGTGGTTTTTGTCTGCGGACGAGTGATTTT-TACCAGTAACTAGTCCGTCGGACGAGTAAACTTTTTGGCCGAGACCAAAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAA---G------T--C---T-T----A---A----GTTACGGTATTTATTCTTTCTACATTTCAACGCAATTATA--A-----AT---AT-----C----A--------TT--------TGCAAACTAGACATTGAACGTTCATCGGCGATAANTTTATCACGCAATT
finalCons : TCCTGACGAGTGGTTTTTGTCTGCGGACGAGTGATTTT-TACCAGTAACTAGTCCGTCGGACGAGTAAACTTTTTGGCCGAGACCAAAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAAGTCGTTTCTGAAAT-------------------GTTACGGTATTTATTCTTTCTACATTTCAACGCAATTATA--A-----AT---AT-----C----A--------TT--------TGCAAACTAGACATTGAACGTTCATCGGCGATAANTTTATCACGCAATT
Alignments
lowQualScore : 3333333333333 111 3333333333
lowQualScore : 3 9 1 222 3 44444 22 1 1 44 1 1111111111111 3 555 22 1111111111 44444 3333 66666666 66666666 66666666 0 3 1 0 1 1
lowQualScore : . . . ... . ..... .. . . .. . ............. . ... .. .......... ..... .... ........ ........ ........ . . . . . .
lowQualScore : 6 2 7 999 3 22222 33 7 7 00 7 8888888888888 1 666 44 9999999999 33333 7777 33333333 33333333 33333333 5 3 9 9 0 6
consensus : TCCTGACGAGTGGTTTTTGTCTGCGGACGAGTGATTTT-TACCAGTAACTAGTCCGTCGGACGAGTAAACTTTTTGGCCGAGACCAAAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAAG-TCGTTTCTGAAA-T-GTTACGGTATTTATTCTTTCTACATTTCAACGCAATTATA--A-----AT---AT-----C----A--------T--------T--------TGCAAACTAGACATTGAACGTTCATCGGCGATAANTTTATCACGCAATT
Reference ( family-695 ) : TCCTGACGAGTGGTTTTTGTCTGCGGACGAGTGATTTT-TACCAGTAACTAGTCCGTCGGACGAGTAAACTTTTTGGCCGAGACCAAAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAAG-TCGTTTCTGAAA-T-GTTACGGTATTTATTCTTTCTACATTTCAACGCAATTATA--A-----AT---AT-----C----A--------T--------T--------TGCAAACTAGACATTGAACGTTCATCGGCGATAANTTTATCACGCAATT
gi|19854 : TCCTGACGACTGGTTTTTGTCTGCGGACGAGTGATTTT-TGCCAGTAACTAGTCCGTCGGATGAGTAAACCTTTTGGCAGAGATCAAAAAATAA-ACAA---TCTG-AAA-----AT--TG-T-AAAAAAGGT-AATGATCCAAAG-TC-------------GTTACGGTATTTATTCTTTCTATATTTCATTGC---TGTA--A-----AT---AT-----A----A--------T--------T--------TGTAAATTTGACATTTAACGATCATCAACGATAACTTTATCATGCAATT
gi|19855 : TCCTGACGACTGATTTTTGTCTGCGAACGAGTGATTTT-TACCAGTATCTAATCTGTCGGACAAGTAAACCTTTTGGCAGAGATAAAAAAATAA-ACAA---TCTG-AAA-----AC--TG-TAAAAAAAGT--TATGATCCAAAG-TC-------------ATTACAGTATTTATTCTTTCTATATTTCATTGC---TGTA--A-----AT---AT-----A----A--------T--------C--------TGTAAATTTGAAATTTAACGATCATCAACGATAACTTTATCATGCAATT
gi|19856 : TCCTGATGACTGGTTTTTGTCTTAGGACGAGTGATTAT-TACCAGTAACTAGTCTGTCCGATGGGTAAACTTTTTGGCCGAGATCAAAAAATAA-ACTA---TCTAAAAT-----AA--TG-T-AAAAAAAAGTAATGATCCAAAG-TC-------------GTTATGGTATTTATTCTTTCTATATTTCATTGC---TGAA--A-----AT---AT-----C----A--------T--------T--------TGTAAATTTGATATTTAACGTTCATCAACGATAACTTTATCATGCAAT
gi|19857 : TCCTGACGAGTGGTTTTTGTCTGTGGACGAGTGATTTT-TACCAGTTACTAGACCATCGGATGAGTAAACTTTTTGATCAAGATTGAAAAATAA-ACAA---TCTG-AAA-----AC--TGTT-AAAAAAGA--AATGATACAAAG-TC-------------GTTACGGTATTTATTCTTTCT--ATTT--ACGTTGTTGCA--A-----AT---AT-----C----A--------T--------T--------TGTAAATTTGACATTTAACGTTCATCAACGATAACTTTATCATGCAATT
gi|19858 : TTCTGACGAGTGGTTTTTGTCTGCAGACGAGAGGTTTT-TACCAGTAACTAGTCAGTCTGACAAGTAAACTTTTTGGCCGAGATCGAAAAATAA-AC-A---TCTG-AAA-----AC--TG-T-AAAAAAGA--AACAATCCAAAG-TC-------------GTTACAGTATTTATTCTTTCTATATTTCATTGC---TGCA--A-----AT---AT-----CATAAA--------T--------T--------TGTAAATTTGACATTTAACGTTCATCAACAATAACTTAATCATGCAATT
gi|19859 : TCCTGACGAGTGGTTTTTGCCTGTGGACAAGTGGTTTT-TACCAGTAACTAGTCCGTCGGATGAGTAAACTTTTTGGCCGAGATCGAAAAATAA-ACAA---TCTG-AAA-----AC--TG-T-AAAAAAGA--CTTGATTTGAAG-TCGTT--------T-GTCACAGTATTTATTCTTTCTATATTTCATTGC---TAGA--A-----AT---AT-----C----A--------T--------T--------TGTAAATTTGACATTTAATGTTCATCAATGGTAACTCTCTCATGCAATT
gi|19860 : TCCTGACAAGTGGTTTTTGTCTGCGGATGAGTAATTTT-TACCAGTAACCAGTCTATTGCACGAGTAAACTTTTTGGCCGAGATAAAAAAAAAA-ATAA---TCTGAAAA-----AT-------------AA--AATGGTCCAAAG-TC-------------GTTATGGTATTTATTCTTTCTATATTTAATTGC---TGTA--A-----AT---AT-----C----A--------T--------T--------TGTAAATTTGACATTTAACGTTCATCAGCGATAACTTTATAGTGCAATT
gi|19861 : TCCTGACGAGTGGGTTTTGTCTGCAGACGAGTGATTTTTTACCAGTTACTAGTCCGTCAGACGAGTAAACGTTTTGGCCAAGATCGAAAAAT-----------------------AC--TG-T-AAAAATAT--TTTTATCCAAAG-TC-------------GTTACGGTATTTATTCTTTCTATATTTCATTGC---TCTA--A-----AT---AT-----C----A--------T--------T--------TG-AAACT------------TTCATCGATGATAACTTTATCATACAA
gi|19862 : TCCTAGC-AGTGGTTTTTGTCTGCGTACGAGTAATTTT-TACCAGTAACTAGTCTATTGGACCAGTAAACATTTTGGCCAAAATC
gi|19863 : TCGTAACGAATGGTTTCTGCTTGCAGATGAGTTATTTT-TATCAGTAACTAGTCTGTCAGACGAGTGAACTTT
gi|19864 : GCGGATGAGTGATTTT-C-CCAGTAAATAGTTCGCTGGAGGAGTAAACTTT
gi|19865 : CAAGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TT-T-GAAAAAGA--AATGACACAAAA-TTGTTTCTGAAA-TGGTTACAGTATTTATTCTTTCTACATTTTAACGCAATTATA--ACT---ATTAAAT-----C----A--------T--------T--------TGCAAACTAGACATTGACCATTCCTCGGCAATAAG-TTATAACACAA
gi|19866 : tgaAGATCAAAAG-TAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATAATACAAAT-TCGTTTCTGAAA-TGGTTACAGTATTTATTCTTTCTACATTTCAACGCAATTATA--ATT---ATCAAAT-----C----A--------T--------T--------TGCAAATCAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19867 : AGACCAAAAG-TAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATAATACAAAT-TTGTTTCTGAAA-TGGTTACAGTATTTATTCTTTCTACATTTCAACGCAATTATA--ATT---ATCAAAT-----C----A--------T--------T--------TGCAAATTAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19868 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-C-GAAAAAGA--TATGACACAAAA-TCGTTTCTGA-------------ATTTATTCTTTCTACATATCGACGCAATTATA--ATTTTTAA---AT-----C----A--------T--------T--------TGCAATGTAGACATTGAATGTTCCTCGACAATAAGTT
gi|19869 : AGACCAAAAGTTAA--CAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATAATACAAAATTCGTTTCTGAAA-TGGTTACAGTATTTATTCTTTCTACATTTCAACGCAATAATT--A-----TT---ATTAAACC----A--------T--------T--------TGCAAATTAGACATTGAACGTTCCTCGGCAATAAGTT
gi|19870 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAAAAGA--AATGACACAAAA-TCATTTCTGAAATT-GTTACAGTATTTATTCTTTCTACATTTCAACACAATTATA--ATT---ATTAAAT-----C----A--------T--------T--------TGCAAACTAGACAT
gi|19871 : AGACCAAAA--TAA-ACAA---TCTGAAAA-----AT--TG-T-GAAAAAGA--AATGACACAAAA-TCATTTCTGAAATT-GTTACAGTATTTATTCTTTCTACATTTCA
gi|19872 : AGACCAAAA-ATAA-ACAA---TCTGTAAA-----AC--TG-C-GAAAAAGA--AATTACACAAAA-TCATTTCTGAAATT-GTTACAGTATTTATTCTTTCTACATTTCAACGCATTTATA--ATGGTTAA---AT-----C----A--------T--------T--------TGCAAACTAGACATTGAACGTTCCTCGGCATTAAG-TTATAACACAA
gi|19873 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-C-GAAAAAGA--TATGATAAAAAA-TCGTTTCTGAAA-TAGTTACAGAATTTATTCTTTCTACATGTCAACGCAATTATA--ATT---ATTAAAT-----C----A--------T--------T--------TGCAAAGTAGACATAGAACGTTCCTCGGCAATAAG-TTATAACACAA
gi|19874 : AGACCAAAA-ATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAATAGA--AATGACACAAAA-TTGTTTCTGAAA-T-A----GTTATTTATTCTTTCTACAATT----ATAATTATT--A-----A----AT-----C----A--------T--------T--------AGCAACCTAGATATTGAACGTTCATAAGCAATAAATT
gi|19875 : AGACCAAAA-ATAA-ACAA---TTTGAAAA-----AC--TG-T-GAAATAGA--AATGACACAAAA-TCGTTTCTGAAA-TAGTTACATTATTTATTATTTCTACAAATCAACGCAATTATAACA-----ATTAAAT-----C----A--------T--------T--------TGCAAACTAGACATTGAGCATTCATCGGCAATAAGTT
gi|19876 : AGAAAATGAGACCC---TCGGAAAA-----AC--TG-T-CAAATAGA--AATGACCAAAAG-TCGTTTCCATAT-C-GTAATTGTATGTATT-TTTGTATATTTCAACGCG---ATA--A-----AT---AT-----C----A--------TTAAATCACT--------TGCAAATTTAACATTGAACGTTAATCAACAATAATTTTataacatg
gi|19877 : AAAAATAA-ACAA---TCTGAAAA-----AC--TG-T-GAAATAGA--AATGACACAAAA-TCGTTTCTGAAA-TAGTTACAGTATTTATTCTTTCTACATATCAACTCAATTATA--ATT---ATTAAAT-----C----A--------T--------T--------CGCAAACTAGACATTGAACGATCCTAGGCAATAAATT
gi|19878 : AAAAGTAA-ACAA---TCTGAAAA-----AC--TG-T-GAAATATA--AATGACACAAAA-TTGTTTCTGAAG-TAGTTACAGTATTTATTCTTTCTACATATCAACACAATT-----------AT---AT-----C----A--------T--------T--------TGCAATCTAGACATTGAATGTTCCTCGGCAATAACTT
gi|19879 : AAAATAA-AGAA---ACTGAAAA-----AAAATG-T-GAAAA-GA--CTTGGCGCAAAG-TCATTTCTGAAA-TCGTTGCAGAATTTATTCATT-TATATTTCAATG---TTATA--A-----AT---AT-----C----A--------T--------TAAATCATTTGCTAACTAGACATTGAATGTTCCTCAATAATAAGTT
gi|19880 : AAATGA-GCAAATTTCAGAAAATGCAAGT--TG-T-AAAAAAGA--AATGACAAAAAG-TTGTT----------------GTATTTATTCTTTGTATATTTCAACAC---CATA--A-----AT---AT-----C----ATTCAATCAT--------T--------TGCAAATTTAACATTGAACGTTCATCAACAATAAATTTAataacatg