lowQualScore : 444 222 1 222 11 2222222 111111111111111 33333333333333333 1 11 1 33333333
lowQualScore : 22 777 777 6 1 5 555 6 2 88 4 1111111 22 999 9 2 0 3 2 4444 88 6666666 222222222 44 222222 77 111 444444444 666666666666666 333 8888888888 99999999999999999 111 1 2 111 1 11 11 1 4 1 33 22 0 555 88888888 2222 6
lowQualScore : .. ... ... . . . ... . . .. . ....... .. ... . . . . . .... .. ....... ......... .. ...... .. ... ......... ............... ... .......... ................. ... . . ... . .. .. . . . .. .. . ... ........ .... .
lowQualScore : 66 555 999 1 8 5 999 8 6 55 4 5555555 88 111 5 5 7 0 3 4444 77 7777777 777777777 33 777777 11 666 111111111 888888888888888 777 0000000000 22222222222222222 777 0 0 777 0 66 77 7 6 5 77 00 1 444 44444444 2222 0
consensus : AAAA-GAA---ACATCTCTTNTGTTGCTAGCGAGAAAT-TTCTTC-TTTTCTTATGTTAACGAGANATTTCTCTTGTTCTG-CAT-A---CTTTT-TCCGATTACAA-CGAGACNATCCCAGAAGAGAA-ATTTTCTCTTCTGG----GANNGT-------CT---------CGC-TTTT------A--C---A-----G---A----------CA---A---TA----------CT--------G--------AA---G-AG-A---AGTTTC-TT--TTC--TACTTGACAGTTTTGA-AATATC--CATTCTTTCAAACGCGTGCATTTGAA---C---AC--TTTTCTAGAAGAGAAAAT----TTCTCTTGTAAAATATT
Reference ( gi|133811 ) : AAAA-AAATG-ACATCTCGCCTGTTGCTAGCGAGACAT-TTCTTC-TTTCAGTATGTTTACGAGATATTTCTCTCGTTCTG-CAT-G---CTTTT-TCTGATTACAA-CGAGACAATCCCAGAAGAGAA-ATTTTCTCTTCTAG----GAGGGT-------CT---------CGC-TTTT------A--C---A-----G---A----------CA---A---TA----------CT--------G--------AA---G-AG-A---AGTTTC-TT--TTC--TGCTTGACAGATTTGA-ATTATC--CATTCTTTCAAACGCGCGCATTTGAA---C---AC-TTTTTCTAGAAGAGAAAAT----TTCTCTCGTAAAATATT
gi|133820 : AAAA-GAA---ACATCTTGTCTGTTGCCAGCGAGAAAT-TTCTTC-TTTCCGTATGTTTACGAGATATT-CTCTTGTTCTG-CATAG-----TTT-TCCGATTACAA-CGAGACAATACCAGAAGAAAA-ATGTTCTCTTCTGG----AAGGGC-------CT---------CGC-TTTT------A--C---A-----G---A----------CA---A---TA----------CT--------G--------AA---G-AG-A---AGTTTC-TT--TTC--TGCTTGACATATTTGA-ATTAAC--CATTCTTTCAATCGCGTGCATTTAAA---C---AC-ATTTTCTTGAAGAGAAAAC----TTCTCTTGAAAATTATT
gi|133814 : AAAG-AAAT----ATCTCTTACGTTGCTAGCGAGAAAT-TTCTCCGTTTC-TTATCTTTACAAGGCATTTCTCTTGTTCAG-CAT-A---CTTCT-CC-GATTACAA-CGAGATGATCACAGAAGAGAA-ATTTTCTCTTCTGG----AATGGT-------TT---------CGC-TTAT------G--C---A-----G---A----------CA---A---TA----------CTCTCA----G--------AA---G-AG-A---AGTTTC-TT--TTC--TACTTGACAGTTTTGA-AATAAC--TATTCTTTCAAACGCGTGCATTTGAA---C---ACTTTTTTCTAGAAGAGAAAAT----TTCTCTTGTAAAATAT
gi|133806 : aAAAA-GAA---ACATCTGGTATGTTGCTAGCGAGAAAT-TTCTTC-TTTTCGTATGTTTACGAGATATTTCTCTTGTTCTG-CAT-A---CTTTT-CC-GATCACAA-TGAGACAATCCTAGAAGAGAA-ATTGTCTCTTCTGG----AAGGAT-------AT---------CAC-TTTT------A--C---A-----T---A----------TT---A---TA----------CT--------A--------CA---G-AG-A---CGTTTC-CT--TTC--TACTTGACTGTTTTGA-AAGATT--CATTCTTTCAAACGCGTGCAATTGGA---C---AC-AATTTCTAGAAGAGAAAAT----TTCTCTTGTAAATTATT
gi|133809 : AAAG-AAAT----ATCTCTTACGTTGCTAGCGAGAAAT-TTCTCCATGTC-TTATCTTAACGAAGCATTTCTCTTGTTCTG-CAT-A----TTTC-TCCGATTACAA-CGAGATAATCACAGAAGAGAA-ATTTTCTCTTCTGG----AATGGT-------TT---------CGC-TTTT------A--C---A-----G---A----------CA---A---TA----------CT--------GTCAG----AA---G-AG-A---AGTATC-TT--TTC--CACTTGACAGTTTTGA-AATACC--TACTCTTTCAAACGCGTGTATTTGAA---C---AC-TTTTTCTAGAAGAGAAAAT----TTCTCTTGTAAAATAT
gi|133810 : aAAAA-GAA---ACGTCTGGTATGTTGATAGCGAAAAAT-TTCTTC-TTCTCGTATGTTTACAAGATATTTCTCTTGTTCTG-CAT-A---CTTCT-CC-GATCACAA-CGATACAATCTTAGAAGAGAA-ATTTTCTCTTCTGG----GAGGAT-------TT---------CAC-TTTT------A--C---A-----T---A----------TT---A---TA----------CT--------A--------AA---G-AG-A---CGTTTCGCT--TTC--TACTTGACTGTTTTGA-AAGATT--CATTCTTTCAAACGCGTGCATTTGGA---T---AC-AATTTCTAGAAGAGAAAAT----TTCTCTTGTAAAATATT
gi|133807 : AAAA-GAA---ACGTCTCTTTTGTTGCTAGCCATAAAT-TTCTTC-TTTTCTTATGCAAACAAGACATTTCTCTTGTTCTG-CAT-A---TTTTTTTCTGATTGCAA-CGAGACTATCCCAGAAGAGAA-ATTTTCTCTTCTGG----GAGAGC-------CT---------TGC-TTTT------A--C---A-----T---T----------TT---A---TA----------CT--------G--------AA---G-AG-A---CGTTTC-TT--TTC--CACTTGACAGTTTTGA-AAGATT--CATTCTTTCAAACGCGTATATTTGAA---CTAAA----TTTCTAGAAGAGAAAAT----TTCTCTTGTAAAATAT
gi|133815 : AAAA-GAA---ACATCTCTTATGTTGCTCGCGAGAAAT-TTCTTC-TTTTATTATGTTAACGAGATATTTCTCTTCTTCTG-CAC-A---CTTCT-CCT-ATTACAA-CGAGACAATCCCAGAAGAGAA-AATTTCTCTTCTGG----GACAGC-------CC---------TGC-TTTT------A--C---A-----T---T----------TT---A---TT----------CT--------G--------AA---G-AG-A---AGTTTC-TT--CTC--TACTTGACAGTTTTGA-AAGATT--CATTCTTCAAAACGCATGCATATGAA---CCAAA----TTTCTAGAAGAGAAAAT----TTCTCTTGTAAAATATT
gi|133823 : AAAATAAAT--ATATCTTA--TGTTGATAGCGAGAAAT-TTATTC-CTCTCTTATGTTAACGAGACATTTCTCTTCTTCTG-CAT-A----TTTC-TCCGATAACAA-CGAGACAATCACAGAAGAGAT-TTTTTCTATTCTGG----AAGGGT-------TT---------CGC-TTTT------A--C---A-----G---A----------CA---A---TA----------CT--------GTCAG----AA---G-AG-A---AGTTTC-TT--TTC--CATTTGACAGTTTTGA-AATAGC--CATTCTTTCAAACGCGTGCACATGAA---C---AC-CTTTTCTGGAAGCGAAAAT----ATCTCTTGTAAAATATT
gi|133818 : AAAG-AAAT----ATCTCTTACGTTGCTAGCAATAAAT-TTTTCCGTTTC-TTATCTTAACGAGGCATTTCTCTTGTTGTT-CAT-A----TATC-TCCGATTACAA-CGAGCCAATCTCAGAAGAGAA-ATTTTCTTTTCCGG----AATGGT-------TT---------CGC-TTTT------A--C---A-----G---A----------CA---A---TA----------CT--------GTCAG----AA---G-AG-A---AGTTTC-TT--TTT--CACTTGGCAGTTTTGA-AATATC--TATTCTTTCAAACACGTGCATTTGCA---T---AC-CTTTTCTAGAAGAGAAAAT----TTCTCTTGTAAAATA
gi|133813 : aAAAA-GAA---ACATCTGTTATGTTGCTCGCGAGAAAT-TTCT-C-TTTTATTTTGTTAACGAGATATTCTTCCTGTTCTG-AAC-A---CTTAT-CCC-ATTACAA-CGAGACAATCCCAGAAGAGAA-ATTTTCTCTTCTGG----GACAAC-------CC---------TGC-TTTT------A--A---A-----T---A----------TT---G---TT----------CT--------G--------AA---G-AG-A---AATTTC-TT--TTC--TACTTGACAGTTTTGA-AAGATT--CATTCTTTCAAACGCGTGCATTTGAA---CCAAA----TTTCTAGAAGAGAAAAT----TTCTCTTGTAAAATATT
gi|133812 : AAAA-AAA---ACGTCTCTTTTGTTGCTAGCAAGAAAT-TTCTTC-TTTTCTTATACAAACAAGACATTTCTCTTGTTCTG-CAT-A---TCTTT-TCTGATTGCAA-CGAGACTATCCCAGAA-------TTTTCTCTTCTGG----GAGAGC-------CT---------TGC-TTTT------A--C---A-----T---T----------TT---A---TA----------CT--------G--------AA---A-AG-A---CGTTTC-TT--CTC--TACTTGACAATTTTGA-AAGATT--CATTCGTTCAAACGCGTGAATTTGAA---CTAAA----TTTCTAGAAGAGAAAAT----TTCTCTTGTAAAATAT
gi|133817 : AAAA-GAA---ACTTCTCTTTTGTTGCTAGCGAGAAAT-TTGTTC-TTTTCTTATGCAAACGAGACATTTCTCTTGTTCTG-CAT-A----TTTT-TCCGATTGCAA-CGAGACTATCCTAGAAGAGAA-ATTTTCTCTT-TGG----GAGGGT-------TT---------TGCTTTTT------A--C---A-----T---A----------TT---A---TA----------TT--------G--------AA---G-AG-A---CGTTTC-TT--TTC--TACTTGACATTTATGACAGT-TT--TA-TCTTTCAAACGCGTGAATTTTAA---CCAAA----TTTCTAGAACAGAACAT----TTCTCTTGTAAAATAT
gi|133821 : AAAA-GAA---ACATCGGG--TGTTGCTAGCGAGAAAT-TTCTTC-TTCTTGTATGTTTACGAGATATTTTTTTAGTTCTG-CAT-A---CTTTT-CC-GATCACAA-AGAGACAATCCTAGAAGGGAA-ATTTTCTCCTCTGG----GAGGAT-------CT---------CGC-TTTT------A--C---A-----T---A----------TT---A---TA----------CT--------A--------AA---T-AT-----ACTTTT-TT--TTC--TACTTGACTGTTTTGA-A----------------AAA----TTCATTTGGA---C---AT-AATTTCTAGAAGAGAAAAT----TTCTCTTGTAAAATATT
gi|133824 : AAAA-GAA---ACTTCTCTTTTGTAGCTAGCGATA-ATATTCTTC-TTTTCTTATGCAAACGAGACATTTCTCTTGTTCTG-CAT-ATATCTATT-TCCGATTGCAA-CGAGACTATCCTAGAAGTGAA-ATGTTCTCTTCTGG----GAGGGC-------TT---------TGT-TATT-------------------------------------------------------CT--------G--------AA---G-AG-A---AATTTC-TTCTTTC--TATTTGACAGTTTTGA-AAGATT--CATCCTTTCAAACGCGTGCATTTGAA---CCAAA----TTTCCATAACAGAAAAT----TTCTCTTGTGAAATATT
gi|133819 : AAAA-GAA---ACATCTCCTTTGTTGTTCGCGCGAAAT-TTCTTC-TTTTCTTATGTTAACGAGATTTTTCTCTTCTTCTG-TAC-A---C-TTA-TCCGATTACAA-CGAGACAATCCCAG
gi|133825 : AAA-GAA---ACATCTCTTATGTTACTAACGAGAAAT-GTCTG--TTTAAGTATATTTACGAGATATTTCTCTTGTCCTG-CAT-G---CTTCT-CC-GATTACAA-TGGGACACTCCCAGAAGAGAT-ATTTTCTCTTCTGG----AAGGAT-------CT---------CGA-TTTT------A--C---A-----G---A----------CA---A---CA----------CT--------G--------AA---G-AG-A---AGTTTC-TT--TTC--TGCTTGACAGATTTGA-AATATC--CATTCTTTCAAACGTCTGCATTTGAA---C---AC-TTTTTCTAGAAAAGAAATT----TTCTGTTCTAAAATATT
gi|133826 : AAA-GAA---ACATCTCTTATGTAACTAACGAAAGAT-TTCGG--TTTAAGTATATTTACGTGAAATTTATCTTGTCCTG-CAT-A---CTTCT-AC-GATTACAA-CGAGACACTCCTAGAAGAGAA-ATTTTCTCTTCTGG----AAGGAT-------CT---------CGC-TTTT------A--C---A-----G---A----------CA---A---TA----------CT--------G--------AA---G-AG-A---AGTTTC-TT--TTCTGTGCTTAACAGATTTGA-AATATC--CATTCATTCAAACGTCTGCATTTGAA---C---AC-TTTTTCTAGAAGAGAAAAT----TTCTCTTTTAAAATATT
gi|133816 : AAA-AAAT--ATATCTTAC--GTTGTTAGCGAGAAAT-TTCGTT-TCT---TATCTTAACTGCATATTTC-------------------------TCCGATTACAA-CAAGACAATCAC----------ATTTTCTCTTCTGG----AAGGGT-------TT---------CGC-TTTT------A--C---A-----G---A----------CA---A---TA----------CTGTCA----G--------AA---G-AA-AAGTAGTTTC-TT--TTC--CACTTGACAG--CTGA-AATACC--TATTCTTTCAAATGCGTGCATTTGAA---C---AC-TTTTTCTAGAAGAGAACAT----TTCTCTTGTAAAATA
gi|133822 : agA-AAATATACTTCTCTTTTGTTTCTAGCGAGAAAT-TTCTTC-TTTTCTTATGCAAACAATATATTTCTTTTGTTCTG-AAC-A---CTTCT-AC-GATTGTAA-CGAGACTATCCCAGAAGAGAA-AGTTTCTTATCTGG----GAAAGC-------CC---------TGC-TTTT------A--C---A-----T---A----------TC---A---TA----------CT--------G--------AA---T-AG-A---CGTTTC-TT--TTC--TACTTGACAGTTTTGA-AAGATT--CATTTTTTCCAATGGGTGAATTTGAATCGC---A----TTTCTAGAAGAGAAAAT----TTCTCTTGTACAATATT
gi|133827 : -ACATCTCGTCTGTTGCTGGCGAGAAAT-TTCTTC-TTTCCGTATGTTTACGAGATATTTCTCTCGTTCTG-CAT-A---CTTTT-TCAGATTACAA-CGAGACAATCCCGGAAGAGAA-ATTTTCTCTTGTGA----TAGTGC-------CT---------CAC-TTTT------A--C---A-----G---A----------CA---A---TA----------CT--------G--------AA---G-AG-A---ACTTTC-TT--TTC--TGCTTGACAGATTTGA-ATTATC--CATTCTTTCAAATGCATGCATTTGAA---C---CC-TTATTCTAGAAAAGAAAAT----TTCTCTTTTAAAATATT
gi|133828 : aataa-ACATCTCTTATGTTGCTCGCGAGAAGT-TTCTTC-TTTTCTTATGTTAAGGAGATATTTTTCATGTTTTG-CAT-A----TTTC-TCCGATTACAA-CAAGACA----CA----------TTTTCTCTTCTGG----GAGACC-------CC---------TGC-TTTT------A--C---A-----
gi|133808 : aaTGTTGCTCGCGAGAAAT-TTCTTC-TTTTCTTATGTTAACGAGATATTTCTTCTGTTCTG-CAC-A---CTTAT-CCC-ATTACAA-TGAGACAATCCCAGAAGAGAA-ATTTTCTCTTTTCG----GACAAC-------CC---------TGC-TTTT------A----------------------------A---A---TATTTTT-----CT--------G--------AA---G-AG-A---AGTTTC-TT--TTC--TACTTGACAGTTTTGA-AAGATT--CATTCTTTCAAACGCGTGCATTTGAA---CCAAA----GTTCTAGAAGAGAAAAT----TTCTCTTGTAAAATATTtatt
gi|133829 : aaaagaaagagctgttaTATGTTTACGAGATATTTTTCTTGTTCTG-CAT-A---CTTCT-CC-GATCACAA-CGAGACAATCCAAGAAGAGAA-TTTTTCTCTTCTGG----GAGAG--------CC---------CAC-GTTT------A--C---T-----T---A----------TT---A---TA----------CC--------G--------AA---GAAG-G---CGTTTC-TT--TTC--AACTTGACTGTTTTGA-AAGATT--CATTCTTTCAAACGCGTGAACTTGGA---C---AC-AATTTCTAGAAGAGAAAAT----TTCTCTTGTAAAATATT
gi|133827 : ttttctAGAAAGTTCTCT---TCAG-TAT--------TG-TCTG--TAAAAGTGAGGCACTATCACAAGAGAA-AATTTCTCTTCCGG----GATTGT-------CT---------CGT-T
gi|133820 : aataaacatctcgtctgttgctggcgagaaatttcttctttccgtatgtttacgagatatttctctcgttctgcatactttttcagattacAGAAACTTCTCT---TCAG-TAT--------TG-TCTG--TAAAAGCGAGGCCCTTCCAGAAGAGAACATTTT-TCTTCTGG----TATTGT-------CT---------CGT-Ttttctgcttgacagatttgaattatccattctttcaaatgcatgcatttgaacccttattctagaaaagaaaatttctcttttaaaatatt
gi|133825 : aaaagaaacatcttgtctgttgccagcgagaaatttcttctttccgtatgtttacgagatattctcttgttctgcatagttttccgattacAGAAACTTCTCT---TCAG---T-G-----TTG-TCTG--TAAAATCGAGATCCTTCCAGAAGAGAA-AATATCTCTTCTGG----GAGTGT-------CC---------CA--TTGT------AATC---G-----G---A----------GAAGCA---TG----------CA--------GGAC-----AA---G-AG-A---AATATC-Ttttctgcttgacatatttgaattaaccattctttcaatcgcgtgcatttaaacacattttcttgaagagaaaacttctcttgaaaattatt
gi|133826 : aaagaaacatctcttatgttactaacgagaaatgtctgtttaagtatatttacgAGAAACTTCTCT---TCAG-TAT--------TG-TCTG--TAAAAGCGAGATCCTTCCAGAAGAGAA-AATTTCTCTTCTAG----GAGTGT-------CT---------CGT-Ttttctgcttgacagatttgaaatatccattctttcaaacgtctgcatttgaacactttttctagaaaagaaattttctgttctaaaatatt
gi|133814 : aaagaaacatctcttatgtaactaacgaaagatttcggtttaagtatatttacgtgaaatttatcttgtcctgcatacttctacgattacAGAAACTTCTCT---TCTG-AGA-G---TATTG-TCTGCATA-AG-CGAAACCATTCCAGAAGAGAA-AATTTCTCTTCTGT----GATCAT-------CT---------CG--TTGT------AATC---G-----G---A----------GAAGTA---TG----------CT--------GAAC-----AA---G-AG-A---AATGCC-TT--tttctgtgcttaacagatttgaaatatccattcattcaaacgtctgcatttgaacactttttctagaagagaaaatttctcttttaaaatatt
gi|133809 : aaaagaaatatctcttacgttgctagcgagaaatttctccgtttcttatctttacAGATACTTCTCT---TCTGACA--G---TATTG-TCTG--TAAAAGCGAAACCATTCCAGAAGAGAA-AATTTCTCTTCTGT----GATTAT-------CT---------CGT-Ttttctacttgacagttttgaaataactattctttcaaacgcgtgcatttgaacacttttttctagaagagaaaatttctcttgtaaaatat
gi|133823 : aaaagaaatatctcttacgttgctagcgagaaatttctccatgtcttatcttaacgaagcatttctcttgttctgcatatttctccgattacAGAAACTTCTCT---TCTGACA--G---TATTG-TCTG--TAAAAGCGAAACCCTTCCAGAATAGAA-AAAATCTCTTCTGT----GATTGT-------CT---------CGT-TGTT------A--TCGGA-----G---A-----------A---A---TA-----------TGCAGAA--G--------AA---G-AG-A---AATGTC-Ttttccacttgacagttttgaaatacctactctttcaaacgcgtgtatttgaacactttttctagaagagaaaatttctcttgtaaaatat
gi|133818 : aaaataaatatatcttatgttgatagcgagaaatttattcctctcttatgttaacgAGAAACTTCTCT---TCTGACA--G---TATTG-TCTG--TAAAAGCGAAACCATTCCGGAAAAGAA-AATTTCTCTTCTGA----GATTGG-------CT---------CGT-Ttttccatttgacagttttgaaatagccattctttcaaacgcgtgcacatgaacaccttttctggaagcgaaaatatctcttgtaaaatatt
gi|133833 : aaaagaaatatctcttacgttgctagcaataaatttttccgtttcttatcttaacgaggcatttctcttgttgttcatatatctccgattacAGAAATTTCTCT---TTAG-TAT--------TG-TCTG-TAAAAA-CGATATCCTCCCAGAAGAGAA-AATTTCTCTTCCAG----GATTGT-------CT---------CGT-Tttttcacttggcagttttgaaatatctattctttcaaacacgtgcatttgcataccttttctagaagagaaaatttctcttgtaaaata
gi|133831 : atttctcttgtcctgcatacttctcatattacAGAAACTTCTCT---TCAG-TAT--------TG-TCTG--TAAAAGCGAGACCCTCCTAGAAGAGAA-AATTTCTCTTCTGG----GATTGT-------CT---------CGT-Ttctctgtttgacagacttaaaatatccattctttcaaacgcgttcatttgaacactttttctagaaaagaaaacttcacttttaaaatatt
gi|133832 : AGAAACTTCTCT---TCAG-TAT--------TG-TCTG--TAAAAGCGAGATCCTTCCAGAAGAGAA-AATTTCTCTTCTAG----GAGTGT-------CT---------CGT-T
gi|133830 : AGATACTTCTCT---TCTGACA--G---TATTG-TCTG--TAAAAGCGAAACCATTCCAGAAGAGAA-AATTTCTCTTCT
gi|133833 : ATTTCTCTTGTCCTG-CAT-A---CTTCT-CAT-ATTACAA-CGAGACAATCCTGGAAGAGAA-ATTTTCTCTTCTGG----GAGGAT-------AT---------CGT-TTTT------A--C---A-----G---A----------CA---A---TA----------CT--------A--------AA---G-AG-A---AATTTC-TT--CTC--TGTTTGACAGACTTAA-AATATC--CATTCTTTCAAACGCGTTCATTTGAA---C---AC-TTTTTCTAGAAAAGAAAAC----TTCACTTTTAAAATATTgtga
gi|133824 : TCT-TCAGA--ATAA-CAAAGCCCTCCCAGAAGAGAA-CATTTCACTTCTAG----GATAGT-------CT---------CGT-T
gi|133821 : aaaagaaacttctcttttgtagctagcgataatattcttcttttcttatgcaaacgagacatttctcttgttctgcatatatctatttccgattgcAG-CGAGATCCTCCCAGAGGAGAA-AATTTCCCTTCTAG----GATTGT-------CT---------Cgaaatttcttctttctatttgacagttttgaaagattcatcctttcaaacgcgtgcatttgaaccaaatttccataacagaaaatttctcttgtgaaatatt
gi|133831 : aaaagaaacatcgggtgttgctagcgagaaatttcttcttcttgtatgtttacgagatatttttttagttctgcatacttttccgatcacaaaAA-CGAGACAATCCCAGAAGAGAA-ATTTTCTCTTCTAG----GAGGGT-------CT---------CGC-TTTT------A--C---A-----G---A----------CA---A---TA----------CT--------G--------AA---G-AG-A---AGTTTC-Ttttacatattatactaaatatacttttttttctacttgactgttttgaaaaattcatttggacataatttctagaagagaaaatttctcttgtaaaatatt
gi|133832 : AA-CGAGACACTCCTAGAAGAGAA-ATTTTCTCTTCTGG----AAGGAT-------CT---------CGC-TTTT------A--C---A-----G---A----------CA---A---TA----------CT--------G--------AA---G-AG-A---AGTTTC-T
gi|133834 : AA-CGAGACTATCCCAGAAGAGAA-ATTTTCTCTTCTGG----GAGAGC-------CT---------TGC-T
gi|133835 : AA-CGAGACAATCCCAGAAGAGAA-AATTTCTCTTCTGG----GACAGC-------CC---------TGC-T
gi|133806 : TTCCAGAAGAGAC-AATTTCTCTTCTAG----GATTGT-------CT---------CAT-TGTG------AT-C---G-----G---A----------AA---AG--TA-----------T--------GCAGAAC--AA---G-AG-A---AATATC-T
gi|133810 : aaaagaaacatctggtatgttgctagcgagaaatttcttcttttcgtatgtttacgTCCCAGAAGAGAA-AATTTCTCTTCTAA----GATTGT-------AT---------CGT-TGTG------AT-C---G-----G---A----------GA---AG--TA-----------T--------GCAGAAC--AA---G-AG-A---AATATC-TT--ggatatcacttttacatattatactacagagacgtttcctttctacttgactgttttgaaagattcattctttcaaacgcgtgcaattggacacaatttctagaagagaaaatttctcttgtaaattatt
gi|133807 : aaaagaaacgtctggtatgttgatagcgaaaaatttcttcttctcgtatgtttacTCCCAGAAGAGAA-AATTTCTCTTCTGG----GATAGT-------CT---------CG--TTGC------AATC---A-----GAAAA----------AA---A---TA-----------T--------GCAGAAC--AA---G-AG-A---AATGTC-TT--GTT--TGCggatttcacttttacatattatactaaagagacgtttcgctttctacttgactgttttgaaagattcattctttcaaacgcgtgcatttggatacaatttctagaagagaaaatttctcttgtaaaatatt
gi|133815 : aaaagaaacgtctcttttgttgctagccataaatttcttcttttcttatTCCCAGAAGAGAA-ATTTTCTCTTCTGG----GATTGT-------CT---------CGT-TGTA------A--T---AG----G---A----------GA---AGTGTG----------CA--------G--------AA---G-AA-G---AGgagccttgcttttacattttatactgaagagacgtttcttttccacttgacagttttgaaagattcattctttcaaacgcgtatatttgaactaaatttctagaagagaaaatttctcttgtaaaatat
gi|133813 : aaaagaaacatctcttatgttgctcgcgagaaatttcttcttttattatgttaacgagatatttTCCCAGAAGAGAA-AATTTCTCTTCTGG----GATTGT-------CT---------CGT-Tcagccctgcttttacattttattctgaagagaagtttcttctctacttgacagttttgaaagattcattcttcaaaacgcatgcatatgaaccaaatttctagaagagaaaatttctcttgtaaaatatt
gi|133808 : aaaagaaacatctgttatgttgctcgcgagaaatttctcttttattttgttaacgagatattcttcctgttctgaacacttatcccattacTCCGAAAAGAGAA-AATTTCTCTTCTGG----GATTGT-------CT---------Ccaaccctgcttttaaatattgttctgaagagaaatttcttttctacttgacagttttgaaagattcattctttcaaacgcgtgcatttgaaccaaatttctagaagagaaaatttctcttgtaaaatatt
gi|133812 : aaaagaaagagctgttatgttgctcgcgagaaatttcttcttttcttatgttaacgagatatttcttctgttctgcacacttatcccattacaatTCCCAGAAGAGAA-A------ATTCTGG----GATAGT-------CT---------CG--TTGC------AATC---A-----G---A----------AAAG-A---TA-----------T--------GCAGAAC--AA---G-AG-A---AATGTC-TT--GTT--TGcaaccctgcttttaaatatttttctgaagagaagtttcttttctacttgacagttttgaaagattcattctttcaaacgcgtgcatttgaaccaaagttctagaagagaaaatttctcttgtaaaatatt
gi|133817 : aaaaaaaacgtctcttttgttgctagcaagaaatttcttcttttcttataTCCCA-AAGAGAA-AATTTCTCTTCTAG----GATAGT-------CT---------CG----TT------G--C---AATCGGA---A----------AA---A---TA-----------T--------GCAGAAC--AA---G-AG-A---AATGTC-TC--GTT--TGCgagccttgcttttacattttatactgaaaagacgtttcttctctacttgacaattttgaaagattcattcgttcaaacgcgtgaatttgaactaaatttctagaagagaaaatttctcttgtaaaatat
gi|133829 : aaaagaaacttctcttttgttgctagcgagaaatttgttcttttcttatTCCCAGAAGAGAA-AAATTCTCTTCTTG----GATTGT-------CT---------CGT-Tgggttttgctttttacatattatattgaagagacgtttcttttctacttgacatttatgacagttttatctttcaaacgcgtgaattttaaccaaatttctagaacagaacatttctcttgtaaaatat
gi|133822 : ttttcttatgtttacgagatatttttcttgttctgcatacttctccgatcacTCCCAGATAAGAA-ACTTTCTCTTCTGG----GATAGT-------CT---------CG----TT------A--C---A-----gagcccacgtttacttattataccgaagaaggcgtttcttttcaacttgactgttttgaaagattcattctttcaaacgcgtgaacttggacacaatttctagaagagaaaatttctcttgtaaaatatt
gi|133830 : aaaatatacttctcttttgtttctagcgagaaatttcttcttttcttatgcaaacaatatatttcttttgttctgaacacttctacgatTCACAGAAGAGAA-ATTTTCTCTTCTGG----AATGGT-------TT---------CGC-TTTT------A--C---A-----G---A----------CA---A---TA----------CTGTCA----G--------AA---G-AG-A---AGTATC-Taagccctgcttttacatatcatactgaatagacgtttcttttctacttgacagttttgaaagattcattttttccaatgggtgaatttgaatcgcatttctagaagagaaaatttctcttgtacaatatt
gi|133834 : TCCCAGAAGAGAA-AATTTCTCTTCTGG----GATAGT-------CT---------CGT-T
gi|133835 : agcaaggctcTCCCAGAAGAGAA-ATTTTCTCTTCTGG----GATTGT-------CT---------CGT-T
gi|133833 : agcagggctgCAGAGAAGAA-A-TTTCTCTT-TAG----TATTGT-------CT----------G-----T------A--A---A-----A---A----------CG---A---TATC--------CTCCCA----G--------AA---G-AGAA---AATTTC-TC--TTC--
gi|133814 : atttctcttgtcctgcatacttctcatattacaacgagacaatcctgAAGAGAA-ATTTTCTCTTCTAGAAAAAAGTGTTCAAATGCA---------CGCGTTTG------A--A---A-----G---AATAGTTATTTCA---A---AA----------CTGTCAAGTAG--------AA---A-AG-A---AACTTC-TC--TTC--TG------AGAGT----ATTGTCTGCAT------AAGCG---------AAA---C----C-ATT--CCAGAAGAGAAAAT----TTCTCTtttgacagacttaaaatatccattctttcaaacgcgttcatttgaacactttttctagaaaagaaaacttcacttttaaaatatt
gi|133809 : aaaagaaatatctcttacgttgctagcgagaaatttctccgtttcttatctttacaaggcatttctcttgttcagcatacttctccgattacaacgagatgatcacagaAAGAGAA-ATTTTCTCTTCTAGAAA-AAGTGTTCAAATACA---------CGCGTTTG------A--A---A-----G---AGTAGGTATTTCA---A---AA----------CT--------GTC------AAGTGG-AA-A---AGATAC-TT--CTC--TTC-TGACAG-T-----ATTGTC--TGT------AAAAGCG-------AAAC--C---A-----TTCCAGAAGAGAAAAT----TTCTCTgtaaaatat
gi|133818 : aaaagaaatatctcttacgttgctagcgagaaatttctccatgtcttatcttaacgaagcatttctcttgttctgcatatttctccgattacaacgagataatcacagaAAGAGAA-ATTTTCTCTTCTAGA---AAAGGT-------ATGCAAATGCACGT-GTTTGAAAGAA--T---A-----G---ATATTT-----CA---A---AA----------CT--------GCCAAGTGAAA---A-AG-A---AACTTC-TC--TTC------TGACAG-T-----ATTGTC--TGT------AAAAGCG-------AAAC--C---A-----TTCCGGAAAAGAAAAT----TTCTCTTCTGAGATgtaaaatat
gi|133812 : aaaagaaatatctcttacgttgctagcaataaatttttccgtttcttatcttaacgaggcatttctcttgttgttcatatatctccgattacaacgagccaAAGAGAA-ATTTTCTCTTCTAG----AAgtaaaata
gi|133816 : aaaaaaaacgtctcttttgttgctagcaagaaatttcttcttttcttatacaaacaagacatttctcttgttctgcatatcttttctgattgcaacgagactatcccagaattttctcttctgggagagccttgcttttacattttatactgaaaagacgtttcttctctacttgacaattttgaaagattcattcgttcaaacgcgtgaatttgaactaaatAAGAGAA-ATGTTCTCTTCTAGAAA-AAGTGTTCAAATGCA---------CGC-ATTT------G------A-----A---A----------GA---A---TAGGTATTTCAGCT--------GTCAAGTGGAA---A-AG-A---AACTAC-TT--TTC--TTC-TGACAG-T-----ATTGTC--TGT------AAAAGCG-------AAA---C---CC----TTCCAGAAGAGAAAATGTGATTGTCTTGTgtaaaatat
gi|133836 : agaaaaaatatatcttacgttgttagcgagaaatttcgtttcttatcttaactgcatatttctccgattacaAAGGGAA-ATTTTCTCTTCTAG----AAgtaaaata
gi|133836 : ctttgcttttacatattatactgaagagacgtttcttttctacttgacagttttgaaagagtcattctttcaaacgcgtgaacttgaaccaaatT---------TGC-TTTT------A--C---A-----T---A----------TT---A---TA----------CT--------G--------AA---G-AG-A---CGTTTC-TT--TTC--TACTTGACAGTTTTGA-AAGAGT--CATTCTTTCAAACGCGTGAACTTGAA---CCAAA----TTTCTAGAAGAGAAAAT----TTCCCTTGTAAAATATTgtaaaatatt
gi|133835 : ct---A-----G---A----------CA---A---TC----------CCA-------G--------AA---G-AGAA---AATTTC-TC--TTC--TG--GGACAG
gi|133832 : agcagggA---C---AC-TC---CTAGAAGAGAAATT----TTCTCTcgtt
gi|133813 : agaaacttctcttcagtattgtctgtaaaagcgagatccttccaga-TTGTCCCAGAAGAGAAAAT----TTCTCTctcgtt
gi|133807 : aaaagaaacatctgttatgttgctcgcgagaaatttctcttttattttgttaacgagatattcttcctgttctgaacacttatcccattacaacgagacaatcccagaTCTCCCAGAAGAGAAAAT----TTCTCTccctgcttttaaatattgttctgaagagaaatttcttttctacttgacagttttgaaagattcattctttcaaacgcgtgcatttgaaccaaatttctagaagagaaaatttctcttgtaaaatatt
gi|133834 : aaaagaaacgtctcttttgttgctagccataaatttcttcttttcttatgcaaacaagacatttctcttgttctgcatatttttttctgattgcaacgagactatcccagaTCTCCCAGAAGAGAAAAT----TTCTCTgccttgcttttacattttatactgaagagacgtttcttttccacttgacagttttgaaagattcattctttcaaacgcgtatatttgaactaaatttctagaagagaaaatttctcttgtaaaatat
gi|133826 : agcaaggcTTCCAGAAGAGAAAAT----TTCTCTtctgggatagtctcgtt
gi|133810 : aaagaaacatctcttatgtaactaacgaaagatttcggtttaagtatatttacgtgaaatttatcttgtcctgcatacttctacgattacaacgagacactcctagaTCCCAGAAGAGAAAAT----TTCTCTTCTAAGATggatctcgcttttacagacaatactgaagagaagtttcttttctgtgcttaacagatttgaaatatccattcattcaaacgtctgcatttgaacactttttctagaagagaaaatttctcttttaaaatatt
gi|133833 : aaaagaaacgtctggtatgttgatagcgaaaaatttcttcttctcgtatgtttacaagatatttctcttgttctgcatacttctccgatcacaacgatacaTCCCAGAAGAGAAAAT----TTCTCTggatttcacttttacatattatactaaagagacgtttcgctttctacttgactgttttgaaagattcattctttcaaacgcgtgcatttggatacaatttctagaagagaaaatttctcttgtaaaatatt
gi|133831 : atttctcttgtcctgcatacttctcatattacaacgagacaatcctggaTCCTAGAAGAGAAAAT----TTCTCTggatatcgtttttacagacaatactaaagagaaatttcttctctgtttgacagacttaaaatatccattctttcaaacgcgttcatttgaacactttttctagaaaagaaaacttcacttttaaaatatt
gi|133832 : agaaacttctcttcagtattgtctgtaaaagcgagacccTTCCAGAAGAGAAAAT----TTCTCTtctgggattgtctcgtt
gi|133830 : agaaacttctcttcagtattgtctgtaaaagcgagatccTTCCAGAAGAGAAAAT----TTCTCTtctaggagtgtctcgtt
gi|133835 : agatacttctcttctgacagtattgtctgtaaaagcgaaaccaTCCCAGAAGAGAAAAT----TTCTCTtctgtga
Alignments
lowQualScore : 1 1111 1 2222222
lowQualScore : 22 1 1 1 7777 1 1 2 22 1 2 2 33333 2222 6666 1 222 1 22 22 5 1 3 9999999 1
lowQualScore : .. . . . .... . . . .. . . . ..... .... .... . ... . .. .. . . . ....... .
lowQualScore : 44 0 8 6 1111 8 6 3 00 3 0 4 77777 6666 3333 5 666 5 00 33 0 7 3 0000000 7
consensus : AAAAGAA--ACATCTCTTATGTTGCTAGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGATATTTCTCTTGTTCTGCATA---CTTTTTCC-GATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTGGGAGGGCCTCGC-TTTTACAGACAATA-----CT----G----AAGA-GAAGT---TTC-T--TTTC--TACTTGACAGTTTTGAAAGATCCATTCTTTCAAACGCGTGCATTTGAA-C-A-C--N--T-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
Reference ( family-634 ) : AAAAGAA--ACATCTCTTNTGTTGCTAGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGANATTTCTCTTGTTCTGCATA---CTTTTTCC-GATTACAACGAGACNATCCCAGAAGAGAAATTTTCTCTTCTGGGANNGTCTCGC-TTTTACAGACAATA-----CT----G----AAGA-GAAGT---TTC-T--TTTC--TACTTGACAGTTTTGAAATATCCATTCTTTCAAACGCGTGCATTTGAA-C-A-C--T--T-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133806 : AAAAGAA--ACATCTGGTATGTTGCTAGCGAGAAATTTCTTCTTTTCGTATGTTTACGAGATATTTCTCTTGTTCTGCATA---CTTTT-CC-GATCACAATGAGACAATCCTAGAAGAGAAATTGTCTCTTCTGGAAGGATATCAC-TTTTACATATTATA-----CT----A----CAGA-GACGT---TTC-C--TTTC--TACTTGACTGTTTTGAAAGATTCATTCTTTCAAACGCGTGCAATTGGA-C-A-CA-A--T-TTCTAGAAGAGAAAATTTCTCTTGTAAATTATT
gi|133807 : AAAAGAA--ACGTCTCTTTTGTTGCTAGCCATAAATTTCTTCTTTTCTTATGCAAACAAGACATTTCTCTTGTTCTGCATA---TTTTTTTCTGATTGCAACGAGACTATCCCAGAAGAGAAATTTTCTCTTCTGGGAGAGCCTTGC-TTTTACATTTTATA-----CT----G----AAGA-GACGT---TTC-T--TTTC--CACTTGACAGTTTTGAAAGATTCATTCTTTCAAACGCGTATATTTGAA-CTA-A--A--T-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133808 : AAAAGAA--AGAGCTGTTATGTTGCTCGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGATATTTCTTCTGTTCTGCACA---CTTATCCC--ATTACAATGAGACAATCCCAGAAGAGAAATTTTCTCTTTTCGGACAACCCTGC-TTTTA-----AATATTTTTCT----G----AAGA-GAAGT---TTC-T--TTTC--TACTTGACAGTTTTGAAAGATTCATTCTTTCAAACGCGTGCATTTGAACC-A-A--A--G-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133809 : AAAAGAA--ATATCTCTTACGTTGCTAGCGAGAAATTTCTCCATGTCTTATCTTAACGAAGCATTTCTCTTGTTCTGCATA----TTTCTCC-GATTACAACGAGATAATCACAGAAGAGAAATTTTCTCTTCTGGAATGGTTTCGC-TTTTACAGACAATA-----CTGTCAG----AAGA-GAAGT---ATC-T--TTTC--CACTTGACAGTTTTGAAATACCTACTCTTTCAAACGCGTGTATTTGAA-C-A-CT-T--T-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133810 : AAAAGAA--ACGTCTGGTATGTTGATAGCGAAAAATTTCTTCTTCTCGTATGTTTACAAGATATTTCTCTTGTTCTGCATA---C-TTCTCC-GATCACAACGATACAATCTTAGAAGAGAAATTTTCTCTTCTGGGAGGATTTCAC-TTTTACATATTATA-----CT----A----AAGA-GACGT---TTCGC--TTTC--TACTTGACTGTTTTGAAAGATTCATTCTTTCAAACGCGTGCATTTGGA-T-A-CA-A--T-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133811 : AAAAAAATGACATCTCGCCTGTTGCTAGCGAGACATTTCTTCTTTCAGTATGTTTACGAGATATTTCTCTCGTTCTGCATG---CTTTTTCT-GATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTAGGAGGGTCTCGC-TTTTACAGACAATA-----CT----G----AAGA-GAAGT---TTC-T--TTTC--TGCTTGACAGATTTGAATTATCCATTCTTTCAAACGCGCGCATTTGAA-C-A-CT-T--T-TTCTAGAAGAGAAAATTTCTCTCGTAAAATATT
gi|133812 : AAAAAAA--ACGTCTCTTTTGTTGCTAGCAAGAAATTTCTTCTTTTCTTATACAAACAAGACATTTCTCTTGTTCTGCATA---TCTTTTCT-GATTGCAACGAGACTATCCCAG------AATTTTCTCTTCTGGGAGAGCCTTGC-TTTTACATTTTATA-----CT----G----AAAA-GACGT---TTC-T--TCTC--TACTTGACAATTTTGAAAGATTCATTCGTTCAAACGCGTGAATTTGAA-CTA-A--A--T-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133813 : AAAAGAA--ACATCTGTTATGTTGCTCGCGAGAAATTTCT-CTTTTATTTTGTTAACGAGATATTCTTCCTGTTCTGAACA---CTTATCCC--ATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTGGGACAACCCTGC-TTTTAAATATTGTT-----CT----G----AAGA-GAAAT---TTC-T--TTTC--TACTTGACAGTTTTGAAAGATTCATTCTTTCAAACGCGTGCATTTGAACC-A-A--A--T-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133814 : AAAAGAA--ATATCTCTTACGTTGCTAGCGAGAAATTTCTCCGTTTCTTATCTTTACAAGGCATTTCTCTTGTTCAGCATA---CTTCT-CC-GATTACAACGAGATGATCACAGAAGAGAAATTTTCTCTTCTGGAATGGTTTCGC-TTATGCAGACAATA-----CTCTCAG----AAGA-GAAGT---TTC-T--TTTC--TACTTGACAGTTTTGAAATAACTATTCTTTCAAACGCGTGCATTTGAA-C-A-CTTT--T-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133815 : AAAAGAA--ACATCTCTTATGTTGCTCGCGAGAAATTTCTTCTTTTATTATGTTAACGAGATATTTCTCTTCTTCTGCACA---CTTCT-CC-TATTACAACGAGACAATCCCAGAAGAGAAAATTTCTCTTCTGGGACAGCCCTGC-TTTTACATTTTATT-----CT----G----AAGA-GAAGT---TTC-T--TCTC--TACTTGACAGTTTTGAAAGATTCATTCTTCAAAACGCATGCATATGAACC-A-A--A--T-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133816 : AGAAAAA--ATATATCTTACGTTGTTAGCGAGAAATTTCGT---TTCTTATCTTAAC------------------TGCATA----TTTCTCC-GATTACAACAAGACAATCACA---------TTTTCTCTTCTGGAAGGGTTTCGC-TTTTACAGACAATA-----CT----GTCAGAAGA-AAAGTAGTTTC-T--TTTC--CACTTGACAGCT--GAAATACCTATTCTTTCAAATGCGTGCATTTGAA-C-A-CT-T--T-TTCTAGAAGAGAACATTTCTCTTGTAAAATA
gi|133817 : AAAAGAA--ACTTCTCTTTTGTTGCTAGCGAGAAATTTGTTCTTTTCTTATGCAAACGAGACATTTCTCTTGTTCTGCATA----TTTTTCC-GATTGCAACGAGACTATCCTAGAAGAGAAATTTTCTCTT-TGGGAGGGTTTTGCTTTTTACATATTATA-----TT----G----AAGA-GACGT---TTC-T--TTTC--TACTTGACATTTATGACAGTTTTA-TCTTTCAAACGCGTGAATTTTAACC-A-A--A--T-TTCTAGAACAGAACATTTCTCTTGTAAAATAT
gi|133818 : AAAAGAA--ATATCTCTTACGTTGCTAGCAATAAATTTTTCCGTTTCTTATCTTAACGAGGCATTTCTCTTGTTGTTCATA----TATCTCC-GATTACAACGAGCCAATCTCAGAAGAGAAATTTTCTTTTCCGGAATGGTTTCGC-TTTTACAGACAATA-----CT----GTCAGAAGA-GAAGT---TTC-T--TTTT--CACTTGGCAGTTTTGAAATATCTATTCTTTCAAACACGTGCATTTGCA-T-ACC--T--T-TTCTAGAAGAGAAAATTTCTCTTGTAAAATA
gi|133819 : AAAAGAA--ACATCTCCTTTGTTGTTCGCGCGAAATTTCTTCTTTTCTTATGTTAACGAGATTTTTCTCTTCTTCTGTACA---C-TTATCC-GATTACAACGAGACAATCCCAG
gi|133820 : AAAAGAA--ACATCTTGTCTGTTGCCAGCGAGAAATTTCTTCTTTCCGTATGTTTACGAGATATT-CTCTTGTTCTGCATA---GTTTT-CC-GATTACAACGAGACAATACCAGAAGAAAAATGTTCTCTTCTGGAAGGGCCTCGC-TTTTACAGACAATA-----CT----G----AAGA-GAAGT---TTC-T--TTTC--TGCTTGACATATTTGAATTAACCATTCTTTCAATCGCGTGCATTTAAA-C-A-CA-T--T-TTCTTGAAGAGAAAACTTCTCTTGAAAATTATT
gi|133821 : AAAAGAA--ACATCGG--GTGTTGCTAGCGAGAAATTTCTTCTTCTTGTATGTTTACGAGATATTTTTTTAGTTCTGCATA---CTTTT-CC-GATCACAAAGAGACAATCCTAGAAGGGAAATTTTCTCCTCTGGGAGGATCTCGC-TTTTACATATTATA-----CT----A----AATA-T-ACT---TTT-T--TTTC--TACTTGACTGTTTTGAAA-A---ATT--------------CATTTGGA-C-A----TAAT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133822 : AAAATAT--ACTTCTCTTTTGTTTCTAGCGAGAAATTTCTTCTTTTCTTATGCAAACAATATATTTCTTTTGTTCTGAACA---CTTCT-AC-GATTGTAACGAGACTATCCCAGAAGAGAAAGTTTCTTATCTGGGAAAGCCCTGC-TTTTACATATCATA-----CT----G----AATA-GACGT---TTC-T--TTTC--TACTTGACAGTTTTGAAAGATTCATTTTTTCCAATGGGTGAATTTGAATC-G-C--A--T-TTCTAGAAGAGAAAATTTCTCTTGTACAATATT
gi|133823 : AAAATAA--ATATATCTTATGTTGATAGCGAGAAATTTATTCCTCTCTTATGTTAACGAGACATTTCTCTTCTTCTGCATA----TTTCTCC-GATAACAACGAGACAATCACAGAAGAGATTTTTTCTATTCTGGAAGGGTTTCGC-TTTTACAGACAATA-----CTGTCAG----AAGA-GAAGT---TTC-T--TTTC--CATTTGACAGTTTTGAAATAGCCATTCTTTCAAACGCGTGCACATGAA-C-ACC--T--T-TTCTGGAAGCGAAAATATCTCTTGTAAAATATT
gi|133824 : AAAAGAA--ACTTCTCTTTTGTAGCTAGCGATAATATTCTTCTTTTCTTATGCAAACGAGACATTTCTCTTGTTCTGCATATATCTATTTCC-GATTGCAACGAGACTATCCTAGAAGTGAAATGTTCTCTTCTGGGAGGGCTTTGT-T----------ATT-----CT----G----AAGA-GAAAT---TTC-TTCTTTC--TATTTGACAGTTTTGAAAGATTCATCCTTTCAAACGCGTGCATTTGAACC-A-A--A--T-TTCCATAACAGAAAATTTCTCTTGTGAAATATT
gi|133825 : AAAGAA--ACATCTCTTATGTTACTAACGAGAAATGTCTG-TTTAAGTATATTTACGAGATATTTCTCTTGTCCTGCATG---CTTCT-CC-GATTACAATGGGACACTCCCAGAAGAGATATTTTCTCTTCTGGAAGGATCTCGA-TTTTACAGACAACA-----CT----G----AAGA-GAAGT---TTC-T--TTTC--TGCTTGACAGATTTGAAATATCCATTCTTTCAAACGTCTGCATTTGAA-C-A-CT-T--T-TTCTAGAAAAGAAATTTTCTGTTCTAAAATATT
gi|133826 : AAAGAA--ACATCTCTTATGTAACTAACGAAAGATTTCGG-TTTAAGTATATTTACGTGAAATTTATCTTGTCCTGCATA---CTTCT-AC-GATTACAACGAGACACTCCTAGAAGAGAAATTTTCTCTTCTGGAAGGATCTCGC-TTTTACAGACAATA-----CT----G----AAGA-GAAGT---TTC-T--TTTCTGTGCTTAACAGATTTGAAATATCCATTCATTCAAACGTCTGCATTTGAA-C-A-CT-T--T-TTCTAGAAGAGAAAATTTCTCTTTTAAAATATT
gi|133827 : AATAA--ACATCTCGTCTGTTGCTGGCGAGAAATTTCTTCTTTCCGTATGTTTACGAGATATTTCTCTCGTTCTGCATA---CTTTTTCA-GATTACAACGAGACAATCCCGGAAGAGAAATTTTCTCTTGTGATAGTGCCTCAC-TTTTACAGACAATA-----CT----G----AAGA-GAACT---TTC-T--TTTC--TGCTTGACAGATTTGAATTATCCATTCTTTCAAATGCATGCATTTGAA-C-C-C--T--TATTCTAGAAAAGAAAATTTCTCTTTTAAAATATT
gi|133828 : AA--ACATCTCTTATGTTGCTCGCGAGAAGTTTCTTCTTTTCTTATGTTAAGGAGATATTTTTCATGTTTTGCATA----TTTCTCC-GATTACAACAAGAC-------------ACATTTTCTCTTCTGGGAGACCCCTGC-TTTTACA
gi|133829 : TTTTCTTATGTTTACGAGATATTTTTCTTGTTCTGCATA---CTTCT-CC-GATCACAACGAGACAATCCAAGAAGAGAATTTTTCTCTTCTGGGAGAGCC-CAC-GTTTACTTATTATA-----CC----G----AAGAAGGCGT---TTC-T--TTTC--AACTTGACTGTTTTGAAAGATTCATTCTTTCAAACGCGTGAACTTGGA-C-A-CA-A--T-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATTtatt
gi|133830 : TCACAGAAGAGAAATTTTCTCTTCTGGAATGGTTTCGC-TTTTACAGACAATA-----CTGTCAG----AAGA-GAAGT---ATC-T--
gi|133831 : AACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTAGGAGGGTCTCGC-TTTTACAGACAATA-----CT----G----AAGA-GAAGT---TTC-T--
gi|133832 : AACGAGACACTCCTAGAAGAGAAATTTTCTCTTCTGGAAGGATCTCGC-TTTTACAGACAATA-----CT----G----AAGA-GAAGT---TTC-T--
gi|133833 : ATTTCTCTTGTCCTGCATA---CTTCT-CA-TATTACAACGAGACAATCCTGGAAGAGAAATTTTCTCTTCTGGGAGGATATCGT-TTTTACAGACAATA-----CT----A----AAGA-GAAAT---TTC-T--TCTC--TGTTTGACAGACTTAAAATATCCATTCTTTCAAACGCGTTCATTTGAA-C-A-CT-T--T-TTCTAGAAAAGAAAACTTCACTTTTAAAATATT
gi|133834 : AACGAGACTATCCCAGAAGAGAAATTTTCTCTTCTGGGAGAGCCTTGC-T
gi|133835 : AACGAGACAATCCCAGAAGAGAAAATTTCTCTTCTGGGACAGCCCTGC-T
gi|133836 : TTGC-TTTTACATATTATA-----CT----G----AAGA-GACGT---TTC-T--TTTC--TACTTGACAGTTTTGAAAGAGTCATTCTTTCAAACGCGTGAACTTGAACC-A-A--A--T-TTCTAGAAGAGAAAATTTCCCTTGTAAAATATT
Alignments
lowQualScore : 1 1111 1 22222
lowQualScore : 22 1 1 7777 1 1 1 2 2 33333 8888 1 222 1 22 22 2 1 3 44444 1
lowQualScore : .. . . .... . . . . . ..... .... . ... . .. .. . . . ..... .
lowQualScore : 44 6 8 1111 8 6 3 0 4 77777 9999 5 666 5 00 33 1 7 3 00000 7
consensus : AAAAGAA--ACATCTCTTATGTTGCTAGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGATATTTCTCTTGTTCTGCATA---CTTTTTCC-GATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTGGGAGGGCCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAANATCCATTCTTTCAAACGCGTGCATTTGAA-C-A-C--NT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
Reference ( family-634 ) : AAAAGAA--ACATCTCTTATGTTGCTAGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGATATTTCTCTTGTTCTGCATA---CTTTTTCC-GATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTGGGAGGGCCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAAGATCCATTCTTTCAAACGCGTGCATTTGAA-C-A-C--NT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133806 : AAAAGAA--ACATCTGGTATGTTGCTAGCGAGAAATTTCTTCTTTTCGTATGTTTACGAGATATTTCTCTTGTTCTGCATA---CTTTT-CC-GATCACAATGAGACAATCCTAGAAGAGAAATTGTCTCTTCTGGAAGGATATCAC-TTTTACATATTATA-----CT----ACAG-AGA---CGTTTC-C--TTTC--TACTTGACTGTTTTGAAAGATTCATTCTTTCAAACGCGTGCAATTGGA-C-A-CA-AT-TTCTAGAAGAGAAAATTTCTCTTGTAAATTATT
gi|133807 : AAAAGAA--ACGTCTCTTTTGTTGCTAGCCATAAATTTCTTCTTTTCTTATGCAAACAAGACATTTCTCTTGTTCTGCATA---TTTTTTTCTGATTGCAACGAGACTATCCCAGAAGAGAAATTTTCTCTTCTGGGAGAGCCTTGC-TTTTACATTTTATA-----CT----GAAG-AGA---CGTTTC-T--TTTC--CACTTGACAGTTTTGAAAGATTCATTCTTTCAAACGCGTATATTTGAA-CTA-A--AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133808 : AAAAGAA--AGAGCTGTTATGTTGCTCGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGATATTTCTTCTGTTCTGCACA---CTTATCCC--ATTACAATGAGACAATCCCAGAAGAGAAATTTTCTCTTTTCGGACAACCCTGC-TTTTA-----AATATTTTTCT----GAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAAGATTCATTCTTTCAAACGCGTGCATTTGAACC-A-A--AG-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133809 : AAAAGAA--ATATCTCTTACGTTGCTAGCGAGAAATTTCTCCATGTCTTATCTTAACGAAGCATTTCTCTTGTTCTGCATA----TTTCTCC-GATTACAACGAGATAATCACAGAAGAGAAATTTTCTCTTCTGGAATGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AGA---AGTATC-T--TTTC--CACTTGACAGTTTTGAAATACCTACTCTTTCAAACGCGTGTATTTGAA-C-A-CT-TT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133810 : AAAAGAA--ACGTCTGGTATGTTGATAGCGAAAAATTTCTTCTTCTCGTATGTTTACAAGATATTTCTCTTGTTCTGCATA---C-TTCTCC-GATCACAACGATACAATCTTAGAAGAGAAATTTTCTCTTCTGGGAGGATTTCAC-TTTTACATATTATA-----CT----AAAG-AGA---CGTTTCGC--TTTC--TACTTGACTGTTTTGAAAGATTCATTCTTTCAAACGCGTGCATTTGGA-T-A-CA-AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133811 : AAAAAAATGACATCTCGCCTGTTGCTAGCGAGACATTTCTTCTTTCAGTATGTTTACGAGATATTTCTCTCGTTCTGCATG---CTTTTTCT-GATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTAGGAGGGTCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TGCTTGACAGATTTGAATTATCCATTCTTTCAAACGCGCGCATTTGAA-C-A-CT-TT-TTCTAGAAGAGAAAATTTCTCTCGTAAAATATT
gi|133812 : AAAAAAA--ACGTCTCTTTTGTTGCTAGCAAGAAATTTCTTCTTTTCTTATACAAACAAGACATTTCTCTTGTTCTGCATA---TCTTTTCT-GATTGCAACGAGACTATCCCAG------AATTTTCTCTTCTGGGAGAGCCTTGC-TTTTACATTTTATA-----CT----GAAA-AGA---CGTTTC-T--TCTC--TACTTGACAATTTTGAAAGATTCATTCGTTCAAACGCGTGAATTTGAA-CTA-A--AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133813 : AAAAGAA--ACATCTGTTATGTTGCTCGCGAGAAATTTCT-CTTTTATTTTGTTAACGAGATATTCTTCCTGTTCTGAACA---CTTATCCC--ATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTGGGACAACCCTGC-TTTTAAATATTGTT-----CT----GAAG-AGA---AATTTC-T--TTTC--TACTTGACAGTTTTGAAAGATTCATTCTTTCAAACGCGTGCATTTGAACC-A-A--AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133814 : AAAAGAA--ATATCTCTTACGTTGCTAGCGAGAAATTTCTCCGTTTCTTATCTTTACAAGGCATTTCTCTTGTTCAGCATA---CTTCT-CC-GATTACAACGAGATGATCACAGAAGAGAAATTTTCTCTTCTGGAATGGTTTCGC-TTATGCAGACAATA-----CTCTCAGAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAATAACTATTCTTTCAAACGCGTGCATTTGAA-C-A-CTTTT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133815 : AAAAGAA--ACATCTCTTATGTTGCTCGCGAGAAATTTCTTCTTTTATTATGTTAACGAGATATTTCTCTTCTTCTGCACA---CTTCT-CC-TATTACAACGAGACAATCCCAGAAGAGAAAATTTCTCTTCTGGGACAGCCCTGC-TTTTACATTTTATT-----CT----GAAG-AGA---AGTTTC-T--TCTC--TACTTGACAGTTTTGAAAGATTCATTCTTCAAAACGCATGCATATGAACC-A-A--AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133816 : AGAAAAA--ATATATCTTACGTTGTTAGCGAGAAATTTCGT---TTCTTATCTTAAC------------------TGCATA----TTTCTCC-GATTACAACAAGACAATCACA---------TTTTCTCTTCTGGAAGGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AAAAGTAGTTTC-T--TTTC--CACTTGACAG--CTGAAATACCTATTCTTTCAAATGCGTGCATTTGAA-C-A-CT-TT-TTCTAGAAGAGAACATTTCTCTTGTAAAATA
gi|133817 : AAAAGAA--ACTTCTCTTTTGTTGCTAGCGAGAAATTTGTTCTTTTCTTATGCAAACGAGACATTTCTCTTGTTCTGCATA----TTTTTCC-GATTGCAACGAGACTATCCTAGAAGAGAAATTTTCTCTT-TGGGAGGGTTTTGCTTTTTACATATTATA-----TT----GAAG-AGA---CGTTTC-T--TTTC--TACTTGACATTTATGACAGTTTTA-TCTTTCAAACGCGTGAATTTTAACC-A-A--AT-TTCTAGAACAGAACATTTCTCTTGTAAAATAT
gi|133818 : AAAAGAA--ATATCTCTTACGTTGCTAGCAATAAATTTTTCCGTTTCTTATCTTAACGAGGCATTTCTCTTGTTGTTCATA----TATCTCC-GATTACAACGAGCCAATCTCAGAAGAGAAATTTTCTTTTCCGGAATGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AGA---AGTTTC-T--TTTT--CACTTGGCAGTTTTGAAATATCTATTCTTTCAAACACGTGCATTTGCA-T-ACC--TT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATA
gi|133819 : AAAAGAA--ACATCTCCTTTGTTGTTCGCGCGAAATTTCTTCTTTTCTTATGTTAACGAGATTTTTCTCTTCTTCTGTACA---C-TTATCC-GATTACAACGAGACAATCCCAG
gi|133820 : AAAAGAA--ACATCTTGTCTGTTGCCAGCGAGAAATTTCTTCTTTCCGTATGTTTACGAGATATT-CTCTTGTTCTGCATA---GTTTT-CC-GATTACAACGAGACAATACCAGAAGAAAAATGTTCTCTTCTGGAAGGGCCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TGCTTGACATATTTGAATTAACCATTCTTTCAATCGCGTGCATTTAAA-C-A-CA-TT-TTCTTGAAGAGAAAACTTCTCTTGAAAATTATT
gi|133821 : AAAAGAA--ACATCGG--GTGTTGCTAGCGAGAAATTTCTTCTTCTTGTATGTTTACGAGATATTTTTTTAGTTCTGCATA---CTTTT-CC-GATCACAAAGAGACAATCCTAGAAGGGAAATTTTCTCCTCTGGGAGGATCTCGC-TTTTACATATTATA-----CT----AAAT-AT----ACTTTT-T--TTTC--TACTTGACTGTTTTGAAAAATT------------------CATTTGGA-C-A-TA-AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133822 : AAAATAT--ACTTCTCTTTTGTTTCTAGCGAGAAATTTCTTCTTTTCTTATGCAAACAATATATTTCTTTTGTTCTGAACA---CTTCT-AC-GATTGTAACGAGACTATCCCAGAAGAGAAAGTTTCTTATCTGGGAAAGCCCTGC-TTTTACATATCATA-----CT----GAAT-AGA---CGTTTC-T--TTTC--TACTTGACAGTTTTGAAAGATTCATTTTTTCCAATGGGTGAATTTGAATC-G-C--AT-TTCTAGAAGAGAAAATTTCTCTTGTACAATATT
gi|133823 : AAAATAA--ATATATCTTATGTTGATAGCGAGAAATTTATTCCTCTCTTATGTTAACGAGACATTTCTCTTCTTCTGCATA----TTTCTCC-GATAACAACGAGACAATCACAGAAGAGATTTTTTCTATTCTGGAAGGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AGA---AGTTTC-T--TTTC--CATTTGACAGTTTTGAAATAGCCATTCTTTCAAACGCGTGCACATGAA-C-ACC--TT-TTCTGGAAGCGAAAATATCTCTTGTAAAATATT
gi|133824 : AAAAGAA--ACTTCTCTTTTGTAGCTAGCGATAATATTCTTCTTTTCTTATGCAAACGAGACATTTCTCTTGTTCTGCATATATCTATTTCC-GATTGCAACGAGACTATCCTAGAAGTGAAATGTTCTCTTCTGGGAGGGCTTTGT-T----------ATT-----CT----GAAG-AGA---AATTTC-TTCTTTC--TATTTGACAGTTTTGAAAGATTCATCCTTTCAAACGCGTGCATTTGAACC-A-A--AT-TTCCATAACAGAAAATTTCTCTTGTGAAATATT
gi|133825 : AAAGAA--ACATCTCTTATGTTACTAACGAGAAATGTCTG-TTTAAGTATATTTACGAGATATTTCTCTTGTCCTGCATG---CTTCT-CC-GATTACAATGGGACACTCCCAGAAGAGATATTTTCTCTTCTGGAAGGATCTCGA-TTTTACAGACAACA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TGCTTGACAGATTTGAAATATCCATTCTTTCAAACGTCTGCATTTGAA-C-A-CT-TT-TTCTAGAAAAGAAATTTTCTGTTCTAAAATATT
gi|133826 : AAAGAA--ACATCTCTTATGTAACTAACGAAAGATTTCGG-TTTAAGTATATTTACGTGAAATTTATCTTGTCCTGCATA---CTTCT-AC-GATTACAACGAGACACTCCTAGAAGAGAAATTTTCTCTTCTGGAAGGATCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTCTGTGCTTAACAGATTTGAAATATCCATTCATTCAAACGTCTGCATTTGAA-C-A-CT-TT-TTCTAGAAGAGAAAATTTCTCTTTTAAAATATT
gi|133827 : AATAA--ACATCTCGTCTGTTGCTGGCGAGAAATTTCTTCTTTCCGTATGTTTACGAGATATTTCTCTCGTTCTGCATA---CTTTTTCA-GATTACAACGAGACAATCCCGGAAGAGAAATTTTCTCTTGTGATAGTGCCTCAC-TTTTACAGACAATA-----CT----GAAG-AGA---ACTTTC-T--TTTC--TGCTTGACAGATTTGAATTATCCATTCTTTCAAATGCATGCATTTGAA-C-C-C--TTATTCTAGAAAAGAAAATTTCTCTTTTAAAATATT
gi|133828 : AA--ACATCTCTTATGTTGCTCGCGAGAAGTTTCTTCTTTTCTTATGTTAAGGAGATATTTTTCATGTTTTGCATA----TTTCTCC-GATTACAACAAGACA----CA---------TTTTCTCTTCTGGGAGACCCCTGC-TTTTACA
gi|133829 : TTTTCTTATGTTTACGAGATATTTTTCTTGTTCTGCATA---CTTCT-CC-GATCACAACGAGACAATCCAAGAAGAGAATTTTTCTCTTCTGGGAGAGCC-CAC-GTTTACTTATTATA-----CC----GAAGAAGG---CGTTTC-T--TTTC--AACTTGACTGTTTTGAAAGATTCATTCTTTCAAACGCGTGAACTTGGA-C-A-CA-AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATTtatt
gi|133830 : TCACAGAAGAGAAATTTTCTCTTCTGGAATGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AGA---AGTATC-T--
gi|133831 : AACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTAGGAGGGTCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--
gi|133832 : AACGAGACACTCCTAGAAGAGAAATTTTCTCTTCTGGAAGGATCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--
gi|133833 : ATTTCTCTTGTCCTGCATA---CTTCT-CA-TATTACAACGAGACAATCCTGGAAGAGAAATTTTCTCTTCTGGGAGGATATCGT-TTTTACAGACAATA-----CT----AAAG-AGA---AATTTC-T--TCTC--TGTTTGACAGACTTAAAATATCCATTCTTTCAAACGCGTTCATTTGAA-C-A-CT-TT-TTCTAGAAAAGAAAACTTCACTTTTAAAATATT
gi|133834 : AACGAGACTATCCCAGAAGAGAAATTTTCTCTTCTGGGAGAGCCTTGC-T
gi|133835 : AACGAGACAATCCCAGAAGAGAAAATTTCTCTTCTGGGACAGCCCTGC-T
gi|133836 : CTTTGC-TTTTACATATTATA-----CT----GAAG-AGA---CGTTTC-T--TTTC--TACTTGACAGTTTTGAAAGAGTCATTCTTTCAAACGCGTGAACTTGAACC-A-A--AT-TTCTAGAAGAGAAAATTTCCCTTGTAAAATATT
Alignments
lowQualScore : 1 1111 1 22222
lowQualScore : 22 1 1 7777 1 1 1 2 2 33333 8888 1 222 1 22 22 1 1 3 44444 1
lowQualScore : .. . . .... . . . . . ..... .... . ... . .. .. . . . ..... .
lowQualScore : 44 6 8 1111 8 6 3 0 4 77777 9999 5 666 5 00 33 0 7 3 00000 7
consensus : AAAAGAA--ACATCTCTTATGTTGCTAGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGATATTTCTCTTGTTCTGCATA---CTTTTTCC-GATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTGGGAGGGCCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAANATCCATTCTTTCAAACGCGTGCATTTGAA-C-A-C--NT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
Reference ( family-634 ) : AAAAGAA--ACATCTCTTATGTTGCTAGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGATATTTCTCTTGTTCTGCATA---CTTTTTCC-GATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTGGGAGGGCCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAANATCCATTCTTTCAAACGCGTGCATTTGAA-C-A-C--NT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133806 : AAAAGAA--ACATCTGGTATGTTGCTAGCGAGAAATTTCTTCTTTTCGTATGTTTACGAGATATTTCTCTTGTTCTGCATA---CTTTT-CC-GATCACAATGAGACAATCCTAGAAGAGAAATTGTCTCTTCTGGAAGGATATCAC-TTTTACATATTATA-----CT----ACAG-AGA---CGTTTC-C--TTTC--TACTTGACTGTTTTGAAAGATTCATTCTTTCAAACGCGTGCAATTGGA-C-A-CA-AT-TTCTAGAAGAGAAAATTTCTCTTGTAAATTATT
gi|133807 : AAAAGAA--ACGTCTCTTTTGTTGCTAGCCATAAATTTCTTCTTTTCTTATGCAAACAAGACATTTCTCTTGTTCTGCATA---TTTTTTTCTGATTGCAACGAGACTATCCCAGAAGAGAAATTTTCTCTTCTGGGAGAGCCTTGC-TTTTACATTTTATA-----CT----GAAG-AGA---CGTTTC-T--TTTC--CACTTGACAGTTTTGAAAGATTCATTCTTTCAAACGCGTATATTTGAA-CTA-A--AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133808 : AAAAGAA--AGAGCTGTTATGTTGCTCGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGATATTTCTTCTGTTCTGCACA---CTTATCCC--ATTACAATGAGACAATCCCAGAAGAGAAATTTTCTCTTTTCGGACAACCCTGC-TTTTA-----AATATTTTTCT----GAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAAGATTCATTCTTTCAAACGCGTGCATTTGAACC-A-A--AG-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133809 : AAAAGAA--ATATCTCTTACGTTGCTAGCGAGAAATTTCTCCATGTCTTATCTTAACGAAGCATTTCTCTTGTTCTGCATA----TTTCTCC-GATTACAACGAGATAATCACAGAAGAGAAATTTTCTCTTCTGGAATGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AGA---AGTATC-T--TTTC--CACTTGACAGTTTTGAAATACCTACTCTTTCAAACGCGTGTATTTGAA-C-A-CT-TT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133810 : AAAAGAA--ACGTCTGGTATGTTGATAGCGAAAAATTTCTTCTTCTCGTATGTTTACAAGATATTTCTCTTGTTCTGCATA---C-TTCTCC-GATCACAACGATACAATCTTAGAAGAGAAATTTTCTCTTCTGGGAGGATTTCAC-TTTTACATATTATA-----CT----AAAG-AGA---CGTTTCGC--TTTC--TACTTGACTGTTTTGAAAGATTCATTCTTTCAAACGCGTGCATTTGGA-T-A-CA-AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133811 : AAAAAAATGACATCTCGCCTGTTGCTAGCGAGACATTTCTTCTTTCAGTATGTTTACGAGATATTTCTCTCGTTCTGCATG---CTTTTTCT-GATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTAGGAGGGTCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TGCTTGACAGATTTGAATTATCCATTCTTTCAAACGCGCGCATTTGAA-C-A-CT-TT-TTCTAGAAGAGAAAATTTCTCTCGTAAAATATT
gi|133812 : AAAAAAA--ACGTCTCTTTTGTTGCTAGCAAGAAATTTCTTCTTTTCTTATACAAACAAGACATTTCTCTTGTTCTGCATA---TCTTTTCT-GATTGCAACGAGACTATCCCAG------AATTTTCTCTTCTGGGAGAGCCTTGC-TTTTACATTTTATA-----CT----GAAA-AGA---CGTTTC-T--TCTC--TACTTGACAATTTTGAAAGATTCATTCGTTCAAACGCGTGAATTTGAA-CTA-A--AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133813 : AAAAGAA--ACATCTGTTATGTTGCTCGCGAGAAATTTCT-CTTTTATTTTGTTAACGAGATATTCTTCCTGTTCTGAACA---CTTATCCC--ATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTGGGACAACCCTGC-TTTTAAATATTGTT-----CT----GAAG-AGA---AATTTC-T--TTTC--TACTTGACAGTTTTGAAAGATTCATTCTTTCAAACGCGTGCATTTGAACC-A-A--AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133814 : AAAAGAA--ATATCTCTTACGTTGCTAGCGAGAAATTTCTCCGTTTCTTATCTTTACAAGGCATTTCTCTTGTTCAGCATA---CTTCT-CC-GATTACAACGAGATGATCACAGAAGAGAAATTTTCTCTTCTGGAATGGTTTCGC-TTATGCAGACAATA-----CTCTCAGAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAATAACTATTCTTTCAAACGCGTGCATTTGAA-C-A-CTTTT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133815 : AAAAGAA--ACATCTCTTATGTTGCTCGCGAGAAATTTCTTCTTTTATTATGTTAACGAGATATTTCTCTTCTTCTGCACA---CTTCT-CC-TATTACAACGAGACAATCCCAGAAGAGAAAATTTCTCTTCTGGGACAGCCCTGC-TTTTACATTTTATT-----CT----GAAG-AGA---AGTTTC-T--TCTC--TACTTGACAGTTTTGAAAGATTCATTCTTCAAAACGCATGCATATGAACC-A-A--AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133816 : AGAAAAA--ATATATCTTACGTTGTTAGCGAGAAATTTCGT---TTCTTATCTTAAC------------------TGCATA----TTTCTCC-GATTACAACAAGACAATCACA---------TTTTCTCTTCTGGAAGGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AAAAGTAGTTTC-T--TTTC--CACTTGACAG--CTGAAATACCTATTCTTTCAAATGCGTGCATTTGAA-C-A-CT-TT-TTCTAGAAGAGAACATTTCTCTTGTAAAATA
gi|133817 : AAAAGAA--ACTTCTCTTTTGTTGCTAGCGAGAAATTTGTTCTTTTCTTATGCAAACGAGACATTTCTCTTGTTCTGCATA----TTTTTCC-GATTGCAACGAGACTATCCTAGAAGAGAAATTTTCTCTT-TGGGAGGGTTTTGCTTTTTACATATTATA-----TT----GAAG-AGA---CGTTTC-T--TTTC--TACTTGACATTTATGACAGTTTTA-TCTTTCAAACGCGTGAATTTTAACC-A-A--AT-TTCTAGAACAGAACATTTCTCTTGTAAAATAT
gi|133818 : AAAAGAA--ATATCTCTTACGTTGCTAGCAATAAATTTTTCCGTTTCTTATCTTAACGAGGCATTTCTCTTGTTGTTCATA----TATCTCC-GATTACAACGAGCCAATCTCAGAAGAGAAATTTTCTTTTCCGGAATGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AGA---AGTTTC-T--TTTT--CACTTGGCAGTTTTGAAATATCTATTCTTTCAAACACGTGCATTTGCA-T-ACC--TT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATA
gi|133819 : AAAAGAA--ACATCTCCTTTGTTGTTCGCGCGAAATTTCTTCTTTTCTTATGTTAACGAGATTTTTCTCTTCTTCTGTACA---C-TTATCC-GATTACAACGAGACAATCCCAG
gi|133820 : AAAAGAA--ACATCTTGTCTGTTGCCAGCGAGAAATTTCTTCTTTCCGTATGTTTACGAGATATT-CTCTTGTTCTGCATA---GTTTT-CC-GATTACAACGAGACAATACCAGAAGAAAAATGTTCTCTTCTGGAAGGGCCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TGCTTGACATATTTGAATTAACCATTCTTTCAATCGCGTGCATTTAAA-C-A-CA-TT-TTCTTGAAGAGAAAACTTCTCTTGAAAATTATT
gi|133821 : AAAAGAA--ACATCGG--GTGTTGCTAGCGAGAAATTTCTTCTTCTTGTATGTTTACGAGATATTTTTTTAGTTCTGCATA---CTTTT-CC-GATCACAAAGAGACAATCCTAGAAGGGAAATTTTCTCCTCTGGGAGGATCTCGC-TTTTACATATTATA-----CT----AAAT-AT----ACTTTT-T--TTTC--TACTTGACTGTTTTGAAAAATT------------------CATTTGGA-C-A-TA-AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133822 : AAAATAT--ACTTCTCTTTTGTTTCTAGCGAGAAATTTCTTCTTTTCTTATGCAAACAATATATTTCTTTTGTTCTGAACA---CTTCT-AC-GATTGTAACGAGACTATCCCAGAAGAGAAAGTTTCTTATCTGGGAAAGCCCTGC-TTTTACATATCATA-----CT----GAAT-AGA---CGTTTC-T--TTTC--TACTTGACAGTTTTGAAAGATTCATTTTTTCCAATGGGTGAATTTGAATC-G-C--AT-TTCTAGAAGAGAAAATTTCTCTTGTACAATATT
gi|133823 : AAAATAA--ATATATCTTATGTTGATAGCGAGAAATTTATTCCTCTCTTATGTTAACGAGACATTTCTCTTCTTCTGCATA----TTTCTCC-GATAACAACGAGACAATCACAGAAGAGATTTTTTCTATTCTGGAAGGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AGA---AGTTTC-T--TTTC--CATTTGACAGTTTTGAAATAGCCATTCTTTCAAACGCGTGCACATGAA-C-ACC--TT-TTCTGGAAGCGAAAATATCTCTTGTAAAATATT
gi|133824 : AAAAGAA--ACTTCTCTTTTGTAGCTAGCGATAATATTCTTCTTTTCTTATGCAAACGAGACATTTCTCTTGTTCTGCATATATCTATTTCC-GATTGCAACGAGACTATCCTAGAAGTGAAATGTTCTCTTCTGGGAGGGCTTTGT-T----------ATT-----CT----GAAG-AGA---AATTTC-TTCTTTC--TATTTGACAGTTTTGAAAGATTCATCCTTTCAAACGCGTGCATTTGAACC-A-A--AT-TTCCATAACAGAAAATTTCTCTTGTGAAATATT
gi|133825 : AAAGAA--ACATCTCTTATGTTACTAACGAGAAATGTCTG-TTTAAGTATATTTACGAGATATTTCTCTTGTCCTGCATG---CTTCT-CC-GATTACAATGGGACACTCCCAGAAGAGATATTTTCTCTTCTGGAAGGATCTCGA-TTTTACAGACAACA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TGCTTGACAGATTTGAAATATCCATTCTTTCAAACGTCTGCATTTGAA-C-A-CT-TT-TTCTAGAAAAGAAATTTTCTGTTCTAAAATATT
gi|133826 : AAAGAA--ACATCTCTTATGTAACTAACGAAAGATTTCGG-TTTAAGTATATTTACGTGAAATTTATCTTGTCCTGCATA---CTTCT-AC-GATTACAACGAGACACTCCTAGAAGAGAAATTTTCTCTTCTGGAAGGATCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTCTGTGCTTAACAGATTTGAAATATCCATTCATTCAAACGTCTGCATTTGAA-C-A-CT-TT-TTCTAGAAGAGAAAATTTCTCTTTTAAAATATT
gi|133827 : AATAA--ACATCTCGTCTGTTGCTGGCGAGAAATTTCTTCTTTCCGTATGTTTACGAGATATTTCTCTCGTTCTGCATA---CTTTTTCA-GATTACAACGAGACAATCCCGGAAGAGAAATTTTCTCTTGTGATAGTGCCTCAC-TTTTACAGACAATA-----CT----GAAG-AGA---ACTTTC-T--TTTC--TGCTTGACAGATTTGAATTATCCATTCTTTCAAATGCATGCATTTGAA-C-C-C--TTATTCTAGAAAAGAAAATTTCTCTTTTAAAATATT
gi|133828 : AA--ACATCTCTTATGTTGCTCGCGAGAAGTTTCTTCTTTTCTTATGTTAAGGAGATATTTTTCATGTTTTGCATA----TTTCTCC-GATTACAACAAGACA----CA---------TTTTCTCTTCTGGGAGACCCCTGC-TTTTACA
gi|133829 : TTTTCTTATGTTTACGAGATATTTTTCTTGTTCTGCATA---CTTCT-CC-GATCACAACGAGACAATCCAAGAAGAGAATTTTTCTCTTCTGGGAGAGCC-CAC-GTTTACTTATTATA-----CC----GAAGAAGG---CGTTTC-T--TTTC--AACTTGACTGTTTTGAAAGATTCATTCTTTCAAACGCGTGAACTTGGA-C-A-CA-AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATTtatt
gi|133830 : TCACAGAAGAGAAATTTTCTCTTCTGGAATGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AGA---AGTATC-T--
gi|133831 : AACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTAGGAGGGTCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--
gi|133832 : AACGAGACACTCCTAGAAGAGAAATTTTCTCTTCTGGAAGGATCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--
gi|133833 : ATTTCTCTTGTCCTGCATA---CTTCT-CA-TATTACAACGAGACAATCCTGGAAGAGAAATTTTCTCTTCTGGGAGGATATCGT-TTTTACAGACAATA-----CT----AAAG-AGA---AATTTC-T--TCTC--TGTTTGACAGACTTAAAATATCCATTCTTTCAAACGCGTTCATTTGAA-C-A-CT-TT-TTCTAGAAAAGAAAACTTCACTTTTAAAATATT
gi|133834 : AACGAGACTATCCCAGAAGAGAAATTTTCTCTTCTGGGAGAGCCTTGC-T
gi|133835 : AACGAGACAATCCCAGAAGAGAAAATTTCTCTTCTGGGACAGCCCTGC-T
gi|133836 : CTTTGC-TTTTACATATTATA-----CT----GAAG-AGA---CGTTTC-T--TTTC--TACTTGACAGTTTTGAAAGAGTCATTCTTTCAAACGCGTGAACTTGAACC-A-A--AT-TTCTAGAAGAGAAAATTTCCCTTGTAAAATATT
blockSeqs : TG T A TATC T T T T T TTTTT GTCA A AGT G TC TG G C T CTTT A
blockSeqs : . A A T C . . G A . CTCA . . . . . G C T CTT .
blockSeqs : . A A C T . . T A . GTCA . . . . . T C . CAA .
blockSeqs : . A T C T . . G T . GTCA . . . . . G C . CTT .
blockSeqs : . C T C T . . T A . GTCA . . . . . T T . CTT .
blockSeqs : . T A T T . . T T . GTCA . . . . . G C . CCT .
blockSeqs : . A A C C . . G T . . . . . . . G C . CAT .
blockSeqs : . A T C T . . T A . . . . . . . T . . TAA .
blockSeqs : . A A C T . . G T . . . . . . . G . . CCT .
blockSeqs : . A A C T . . T A . . . . . . . T . . CTT .
blockSeqs : . T A G T . . G T . . . . . . . G . . CTT .
blockSeqs : . A A C T . . G A . . . . . . . T . . CAA .
blockSeqs : . T A C T . . T A . . . . . . . T . . CTT .
blockSeqs : . C T C T . . T T . . . . . . . A . . AA .
blockSeqs : . G T C T . . G C . . . . . . . G . . AA .
blockSeqs : . T A C . . . G A . . . . . . . T . . AA .
blockSeqs : . A A C . . . G A . . . . . . . G . . AA .
blockSeqs : . T A C . . . G A . . . . . . . T . . AA .
blockSeqs : . A T . . . . T A . . . . . . . T . . AA .
blockSeqs : . A T . . . . G T . . . . . . . T . . CA .
blockSeqs : . C T . . . . G A . . . . . . . G . . AA .
blockSeqs : . A A . . . . G A . . . . . . . T . . CT .
blockSeqs : T . . . . G A . . . . . . . G . . AA .
blockSeqs : . . . . T A . . . . . .
blockSeqs : . . T . . . . . .
blockSeqs : . . . . . . . . .
blockSeqs : .
blockSeqs : .
blockSeqs : .
blockSeqCons :
originalCons : AAAAGAA--ACATCTCTTATGTTGCTAGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGATATTTCTCTTGTTCTGCATA---CTTTTTCC-GATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTGGGAGGGCCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAANATCCATTCTTTCAAACGCGTGCATTTGAA-C-A-C--NT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
finalCons : AAAAGAA--ACATCTCTTATGTTGCTAGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGATATTTCTCTTGTTCTGCATA---CTTTTTCC-GATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTGGGAGGGCCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAANATCCATTCTTTCAAACGCGTGCATTTGAA-C-A-C--NT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
Alignments
lowQualScore : 1 1111 1 22222
lowQualScore : 22 1 1 7777 1 1 1 2 2 33333 8888 1 222 1 22 22 1 1 3 44444 1
lowQualScore : .. . . .... . . . . . ..... .... . ... . .. .. . . . ..... .
lowQualScore : 44 6 8 1111 8 6 3 0 4 77777 9999 5 666 5 00 33 0 7 3 00000 7
consensus : AAAAGAA--ACATCTCTTATGTTGCTAGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGATATTTCTCTTGTTCTGCATA---CTTTTTCC-GATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTGGGAGGGCCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAANATCCATTCTTTCAAACGCGTGCATTTGAA-C-A-C--NT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
Reference ( family-634 ) : AAAAGAA--ACATCTCTTATGTTGCTAGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGATATTTCTCTTGTTCTGCATA---CTTTTTCC-GATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTGGGAGGGCCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAANATCCATTCTTTCAAACGCGTGCATTTGAA-C-A-C--NT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133806 : AAAAGAA--ACATCTGGTATGTTGCTAGCGAGAAATTTCTTCTTTTCGTATGTTTACGAGATATTTCTCTTGTTCTGCATA---CTTTT-CC-GATCACAATGAGACAATCCTAGAAGAGAAATTGTCTCTTCTGGAAGGATATCAC-TTTTACATATTATA-----CT----ACAG-AGA---CGTTTC-C--TTTC--TACTTGACTGTTTTGAAAGATTCATTCTTTCAAACGCGTGCAATTGGA-C-A-CA-AT-TTCTAGAAGAGAAAATTTCTCTTGTAAATTATT
gi|133807 : AAAAGAA--ACGTCTCTTTTGTTGCTAGCCATAAATTTCTTCTTTTCTTATGCAAACAAGACATTTCTCTTGTTCTGCATA---TTTTTTTCTGATTGCAACGAGACTATCCCAGAAGAGAAATTTTCTCTTCTGGGAGAGCCTTGC-TTTTACATTTTATA-----CT----GAAG-AGA---CGTTTC-T--TTTC--CACTTGACAGTTTTGAAAGATTCATTCTTTCAAACGCGTATATTTGAA-CTA-A--AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133808 : AAAAGAA--AGAGCTGTTATGTTGCTCGCGAGAAATTTCTTCTTTTCTTATGTTAACGAGATATTTCTTCTGTTCTGCACA---CTTATCCC--ATTACAATGAGACAATCCCAGAAGAGAAATTTTCTCTTTTCGGACAACCCTGC-TTTTA-----AATATTTTTCT----GAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAAGATTCATTCTTTCAAACGCGTGCATTTGAACC-A-A--AG-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133809 : AAAAGAA--ATATCTCTTACGTTGCTAGCGAGAAATTTCTCCATGTCTTATCTTAACGAAGCATTTCTCTTGTTCTGCATA----TTTCTCC-GATTACAACGAGATAATCACAGAAGAGAAATTTTCTCTTCTGGAATGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AGA---AGTATC-T--TTTC--CACTTGACAGTTTTGAAATACCTACTCTTTCAAACGCGTGTATTTGAA-C-A-CT-TT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133810 : AAAAGAA--ACGTCTGGTATGTTGATAGCGAAAAATTTCTTCTTCTCGTATGTTTACAAGATATTTCTCTTGTTCTGCATA---C-TTCTCC-GATCACAACGATACAATCTTAGAAGAGAAATTTTCTCTTCTGGGAGGATTTCAC-TTTTACATATTATA-----CT----AAAG-AGA---CGTTTCGC--TTTC--TACTTGACTGTTTTGAAAGATTCATTCTTTCAAACGCGTGCATTTGGA-T-A-CA-AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133811 : AAAAAAATGACATCTCGCCTGTTGCTAGCGAGACATTTCTTCTTTCAGTATGTTTACGAGATATTTCTCTCGTTCTGCATG---CTTTTTCT-GATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTAGGAGGGTCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TGCTTGACAGATTTGAATTATCCATTCTTTCAAACGCGCGCATTTGAA-C-A-CT-TT-TTCTAGAAGAGAAAATTTCTCTCGTAAAATATT
gi|133812 : AAAAAAA--ACGTCTCTTTTGTTGCTAGCAAGAAATTTCTTCTTTTCTTATACAAACAAGACATTTCTCTTGTTCTGCATA---TCTTTTCT-GATTGCAACGAGACTATCCCAG------AATTTTCTCTTCTGGGAGAGCCTTGC-TTTTACATTTTATA-----CT----GAAA-AGA---CGTTTC-T--TCTC--TACTTGACAATTTTGAAAGATTCATTCGTTCAAACGCGTGAATTTGAA-CTA-A--AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133813 : AAAAGAA--ACATCTGTTATGTTGCTCGCGAGAAATTTCT-CTTTTATTTTGTTAACGAGATATTCTTCCTGTTCTGAACA---CTTATCCC--ATTACAACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTGGGACAACCCTGC-TTTTAAATATTGTT-----CT----GAAG-AGA---AATTTC-T--TTTC--TACTTGACAGTTTTGAAAGATTCATTCTTTCAAACGCGTGCATTTGAACC-A-A--AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133814 : AAAAGAA--ATATCTCTTACGTTGCTAGCGAGAAATTTCTCCGTTTCTTATCTTTACAAGGCATTTCTCTTGTTCAGCATA---CTTCT-CC-GATTACAACGAGATGATCACAGAAGAGAAATTTTCTCTTCTGGAATGGTTTCGC-TTATGCAGACAATA-----CTCTCAGAAG-AGA---AGTTTC-T--TTTC--TACTTGACAGTTTTGAAATAACTATTCTTTCAAACGCGTGCATTTGAA-C-A-CTTTT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATAT
gi|133815 : AAAAGAA--ACATCTCTTATGTTGCTCGCGAGAAATTTCTTCTTTTATTATGTTAACGAGATATTTCTCTTCTTCTGCACA---CTTCT-CC-TATTACAACGAGACAATCCCAGAAGAGAAAATTTCTCTTCTGGGACAGCCCTGC-TTTTACATTTTATT-----CT----GAAG-AGA---AGTTTC-T--TCTC--TACTTGACAGTTTTGAAAGATTCATTCTTCAAAACGCATGCATATGAACC-A-A--AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133816 : AGAAAAA--ATATATCTTACGTTGTTAGCGAGAAATTTCGT---TTCTTATCTTAAC------------------TGCATA----TTTCTCC-GATTACAACAAGACAATCACA---------TTTTCTCTTCTGGAAGGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AAAAGTAGTTTC-T--TTTC--CACTTGACAG--CTGAAATACCTATTCTTTCAAATGCGTGCATTTGAA-C-A-CT-TT-TTCTAGAAGAGAACATTTCTCTTGTAAAATA
gi|133817 : AAAAGAA--ACTTCTCTTTTGTTGCTAGCGAGAAATTTGTTCTTTTCTTATGCAAACGAGACATTTCTCTTGTTCTGCATA----TTTTTCC-GATTGCAACGAGACTATCCTAGAAGAGAAATTTTCTCTT-TGGGAGGGTTTTGCTTTTTACATATTATA-----TT----GAAG-AGA---CGTTTC-T--TTTC--TACTTGACATTTATGACAGTTTTA-TCTTTCAAACGCGTGAATTTTAACC-A-A--AT-TTCTAGAACAGAACATTTCTCTTGTAAAATAT
gi|133818 : AAAAGAA--ATATCTCTTACGTTGCTAGCAATAAATTTTTCCGTTTCTTATCTTAACGAGGCATTTCTCTTGTTGTTCATA----TATCTCC-GATTACAACGAGCCAATCTCAGAAGAGAAATTTTCTTTTCCGGAATGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AGA---AGTTTC-T--TTTT--CACTTGGCAGTTTTGAAATATCTATTCTTTCAAACACGTGCATTTGCA-T-ACC--TT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATA
gi|133819 : AAAAGAA--ACATCTCCTTTGTTGTTCGCGCGAAATTTCTTCTTTTCTTATGTTAACGAGATTTTTCTCTTCTTCTGTACA---C-TTATCC-GATTACAACGAGACAATCCCAG
gi|133820 : AAAAGAA--ACATCTTGTCTGTTGCCAGCGAGAAATTTCTTCTTTCCGTATGTTTACGAGATATT-CTCTTGTTCTGCATA---GTTTT-CC-GATTACAACGAGACAATACCAGAAGAAAAATGTTCTCTTCTGGAAGGGCCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TGCTTGACATATTTGAATTAACCATTCTTTCAATCGCGTGCATTTAAA-C-A-CA-TT-TTCTTGAAGAGAAAACTTCTCTTGAAAATTATT
gi|133821 : AAAAGAA--ACATCGG--GTGTTGCTAGCGAGAAATTTCTTCTTCTTGTATGTTTACGAGATATTTTTTTAGTTCTGCATA---CTTTT-CC-GATCACAAAGAGACAATCCTAGAAGGGAAATTTTCTCCTCTGGGAGGATCTCGC-TTTTACATATTATA-----CT----AAAT-AT----ACTTTT-T--TTTC--TACTTGACTGTTTTGAAAAATT------------------CATTTGGA-C-A-TA-AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATT
gi|133822 : AAAATAT--ACTTCTCTTTTGTTTCTAGCGAGAAATTTCTTCTTTTCTTATGCAAACAATATATTTCTTTTGTTCTGAACA---CTTCT-AC-GATTGTAACGAGACTATCCCAGAAGAGAAAGTTTCTTATCTGGGAAAGCCCTGC-TTTTACATATCATA-----CT----GAAT-AGA---CGTTTC-T--TTTC--TACTTGACAGTTTTGAAAGATTCATTTTTTCCAATGGGTGAATTTGAATC-G-C--AT-TTCTAGAAGAGAAAATTTCTCTTGTACAATATT
gi|133823 : AAAATAA--ATATATCTTATGTTGATAGCGAGAAATTTATTCCTCTCTTATGTTAACGAGACATTTCTCTTCTTCTGCATA----TTTCTCC-GATAACAACGAGACAATCACAGAAGAGATTTTTTCTATTCTGGAAGGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AGA---AGTTTC-T--TTTC--CATTTGACAGTTTTGAAATAGCCATTCTTTCAAACGCGTGCACATGAA-C-ACC--TT-TTCTGGAAGCGAAAATATCTCTTGTAAAATATT
gi|133824 : AAAAGAA--ACTTCTCTTTTGTAGCTAGCGATAATATTCTTCTTTTCTTATGCAAACGAGACATTTCTCTTGTTCTGCATATATCTATTTCC-GATTGCAACGAGACTATCCTAGAAGTGAAATGTTCTCTTCTGGGAGGGCTTTGT-T----------ATT-----CT----GAAG-AGA---AATTTC-TTCTTTC--TATTTGACAGTTTTGAAAGATTCATCCTTTCAAACGCGTGCATTTGAACC-A-A--AT-TTCCATAACAGAAAATTTCTCTTGTGAAATATT
gi|133825 : AAAGAA--ACATCTCTTATGTTACTAACGAGAAATGTCTG-TTTAAGTATATTTACGAGATATTTCTCTTGTCCTGCATG---CTTCT-CC-GATTACAATGGGACACTCCCAGAAGAGATATTTTCTCTTCTGGAAGGATCTCGA-TTTTACAGACAACA-----CT----GAAG-AGA---AGTTTC-T--TTTC--TGCTTGACAGATTTGAAATATCCATTCTTTCAAACGTCTGCATTTGAA-C-A-CT-TT-TTCTAGAAAAGAAATTTTCTGTTCTAAAATATT
gi|133826 : AAAGAA--ACATCTCTTATGTAACTAACGAAAGATTTCGG-TTTAAGTATATTTACGTGAAATTTATCTTGTCCTGCATA---CTTCT-AC-GATTACAACGAGACACTCCTAGAAGAGAAATTTTCTCTTCTGGAAGGATCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--TTTCTGTGCTTAACAGATTTGAAATATCCATTCATTCAAACGTCTGCATTTGAA-C-A-CT-TT-TTCTAGAAGAGAAAATTTCTCTTTTAAAATATT
gi|133827 : AATAA--ACATCTCGTCTGTTGCTGGCGAGAAATTTCTTCTTTCCGTATGTTTACGAGATATTTCTCTCGTTCTGCATA---CTTTTTCA-GATTACAACGAGACAATCCCGGAAGAGAAATTTTCTCTTGTGATAGTGCCTCAC-TTTTACAGACAATA-----CT----GAAG-AGA---ACTTTC-T--TTTC--TGCTTGACAGATTTGAATTATCCATTCTTTCAAATGCATGCATTTGAA-C-C-C--TTATTCTAGAAAAGAAAATTTCTCTTTTAAAATATT
gi|133828 : AA--ACATCTCTTATGTTGCTCGCGAGAAGTTTCTTCTTTTCTTATGTTAAGGAGATATTTTTCATGTTTTGCATA----TTTCTCC-GATTACAACAAGACA----CA---------TTTTCTCTTCTGGGAGACCCCTGC-TTTTACA
gi|133829 : TTTTCTTATGTTTACGAGATATTTTTCTTGTTCTGCATA---CTTCT-CC-GATCACAACGAGACAATCCAAGAAGAGAATTTTTCTCTTCTGGGAGAGCC-CAC-GTTTACTTATTATA-----CC----GAAGAAGG---CGTTTC-T--TTTC--AACTTGACTGTTTTGAAAGATTCATTCTTTCAAACGCGTGAACTTGGA-C-A-CA-AT-TTCTAGAAGAGAAAATTTCTCTTGTAAAATATTtatt
gi|133830 : TCACAGAAGAGAAATTTTCTCTTCTGGAATGGTTTCGC-TTTTACAGACAATA-----CTGTCAGAAG-AGA---AGTATC-T--
gi|133831 : AACGAGACAATCCCAGAAGAGAAATTTTCTCTTCTAGGAGGGTCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--
gi|133832 : AACGAGACACTCCTAGAAGAGAAATTTTCTCTTCTGGAAGGATCTCGC-TTTTACAGACAATA-----CT----GAAG-AGA---AGTTTC-T--
gi|133833 : ATTTCTCTTGTCCTGCATA---CTTCT-CA-TATTACAACGAGACAATCCTGGAAGAGAAATTTTCTCTTCTGGGAGGATATCGT-TTTTACAGACAATA-----CT----AAAG-AGA---AATTTC-T--TCTC--TGTTTGACAGACTTAAAATATCCATTCTTTCAAACGCGTTCATTTGAA-C-A-CT-TT-TTCTAGAAAAGAAAACTTCACTTTTAAAATATT
gi|133834 : AACGAGACTATCCCAGAAGAGAAATTTTCTCTTCTGGGAGAGCCTTGC-T
gi|133835 : AACGAGACAATCCCAGAAGAGAAAATTTCTCTTCTGGGACAGCCCTGC-T
gi|133836 : CTTTGC-TTTTACATATTATA-----CT----GAAG-AGA---CGTTTC-T--TTTC--TACTTGACAGTTTTGAAAGAGTCATTCTTTCAAACGCGTGAACTTGAACC-A-A--AT-TTCTAGAAGAGAAAATTTCCCTTGTAAAATATT