lowQualScore : 111111111111 11111111 111 11
lowQualScore : 0 1 11 4 1 5 000000000000 666666666 2 66666 2 33 33 33 2 2 444 444 555 3 6666 3 6 77 3 44 44 00000000 555 33 77777 3 3 1 6666 4 44 000 55 5 7777 0 222
lowQualScore : . . .. . . . ............ ......... . ..... . .. .. .. . . ... ... ... . .... . . .. . .. .. ........ ... .. ..... . . . .... . .. ... .. . .... . ...
lowQualScore : 6 3 88 4 3 5 777777777777 888888888 5 22222 5 44 44 44 7 7 777 777 444 1 5555 1 2 33 1 22 22 44444444 000 66 11111 1 1 4 6666 1 77 444 88 4 7777 7 222
consensus : TACAGACCGTAATCCGTTCAAGTACACCAA-A--ANTGCACTCCGNTTGCG-------CTCGGTTTGCG---TG----TC-AAAC-----GCG-TTT--G--TT--TTGCGTTT-G-AAA---TGCA---TTTTAG---TTTCGTTAATG-GTTTGCAT----T-TT-TTT--ATG-AT--AAACGTTAGAGA--AAAT--------ACGAAAATG---CA-GTTCA-----AA-ACG-ATAGT---GAACGCATTTTAGCCTGCG--TTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
Reference ( gi|69051 ) : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGCG-------TTCGTTTTGCG---TG----TC-AAAC-----GCG-TTT--G--TT--TTGCGTTT-G-AAA---TGCA---TTTTAG---TTTCGTTAATG-GTTTGCAT----T-TT-TTT--ATG-AT--AAACGTTAGAGA--AAAT--------ACGAAAATG---CA-GTTCA-----AA-ACG-ATAGT---GAATGCATTTTAACCTGCA--TTTGCGTTCGAATCGTTTTGCATGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69055 : TAAAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAGTTGCG-------TTCATTTTGCG---TG----TC-AAAC-----GCG-TTT--G--TT--TTGCGTTT-G-AAA---TGCA---TTTTAG---TTTCGTTAATG-GTTTGCAT----T-TTTTTT--ATG-AC--AAACGTTAGAGA--AAAT--------ACGAAAATG---CA-GTTCA-----AA-ACG-ATAGT---GAATGCATTTTAACCTGCG--TTTGCGTTCGAATCGTTTTGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTCATTGTCCAATTATA
gi|69053 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGTG-------TTCGTTTTGCG---TG----TC-AAAC-----GCG-TTT--G--TT--TTGTGTTT-G-AAA---TGCA---TTTTAG---TTTTGTTTATG-GTTTGCAT----TATT-TTT--ATG-TT--AAACGTTAGAGA--AAAT--------ACGAAAATG---CA-GTTCA-----AA-ACG-ATAGT---GAACGCATTTTAGTCTGCG--TTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69054 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAACTGCG-------TTCGTTTTGCG---TG----TC-AAAC-----ACG-TTT--G--TT--TTATGTTT-G-AAA---TGCA---TTTTAG---TTTTGTTGATG-GTTTGCAT----T-TT-TTT--ATG-AT--AAACGTTAGAGA--AAAT--------ACAAAAATG---CA-GTTCA-----AA-ACG-ATAGT---GAACGCATTTTAGTCTGCG--TTTGCGTTCGAATCGTTTAACGTGTATCGTT---TACCGTGTATCATTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCTAATTGTA
gi|69057 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCATTTGCG-------TTCGTTTTGCG---TG----TC-AAAC-----GCG-TTT--G--TT--TTGTGTTT-G-AAA---TGCA---TTTTAG---TTTCGTTAATG-GTTTGCAT----T-TT-TTTT-ATT-AT--AAACGTCAGAGA--AAAT--------ACGAAATTG---CA-GTTAA-----AA-AGG-ATAGT---GAACGCATTTTAACCTGCG--TTTGCGTTCAAATCGTTTAGCGTGTATCGTT---TACCATGTATCTTTTACCATTAAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69059 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATT------------------------------------TC-AATT-----GCG-TTT--G--TT--TTGCGTTT-G-AAA---TGCA---TTTTAG---TTTTGTTAATA-GTTTGCAT----T-TTTTTT--ATG-AT--AAATGTTAGAGA--AAAT--------ACGAAAATG---CA-GTTCA-----AA-ACG-ATAGT---GAACGCATTTTAGTCTGCG--TTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69061 : TACAGACCGTAATCTGTTGAAGTACACCAA-A--AATGCATTTCAAATGCG-------TTCGTTTTGCG---TG----TC-AAAC-----GCG-TTT--G--TT--TTGCGTTT-G-AAA---TGCA---TTTTAG---TTTTGTTAATG-GATTGCAT----T-TT-TTT--ATG-AT--AAACTTTAGAGA--AAAT--------ACGAAAATG---CA-GTTCC-----AA-ACG-ATACT---TAAAGCTTTTTAGCCTGCG--TTTGCGTTTGAATTGTTTAGCGTGTATTGT-----------------TTACCATTTAACGTTTACACGGCATGTTCACCAATCGCATCATCTCAGGTTGTCCAATTGTA
gi|69064 : TACAGACCATAATCTGTTCAAGTACACCAA-A--AATGCATTTCAAATGTG-------TTTGTTTTGCG---TG----TC-AAAC-----GCA-ATT--G--TT--TTGCATTT-C-AAA---TACA---TTTTAG---TTTCGTTTATG-GTTTGCAT-----------------------------AAAAA--AAAT--------GCGAAAATG---CA-GTTCA-----AA-ACG-ATACT---AAACGCATTTTAGCCTGAA--TCTGCATTCAAATCGTTTACCATGTATCATT---TATCA---A-----TACCATTTATCGTTTACACTGCGTGCTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69063 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGCG-------TTCGTTTTGCG---TG----TC-AAAT-----GCA-TTT--G--TT--TTGCGTTT-G-AAA---TGCA---TTTTAG---TTTCGTTAATG-GTTTGCAT----T-TT-TTTTGATG-AT--AAACGTTAGAGA--AAAT--------ACG--TTTG---TA--TTCG-----AA-TCG-----------------TTTAG----------TGTGT----ATCGTTTACCGTGTATC-----------------TTTTACCATTTAACATTTGCACGACATGTTCACCAATCGCATCATCTCTTGTTGTCCAATTGTA
gi|69065 : TACAGACCGTAATCTGTTCAAGTACACCAA-A--A-----------TTGCA-------TT------------------TC-AAAT-----GCA-TTT--G--TT--TTACGTTT-T-AAA---TGCA---TTTTAG---TTTCATTGATG-GTTTGCAT----T-TT-TTT--CTG-AT--AAATGTTAGAGA--AATA--------ATGAAAATT---CA-GTTCA-----AA-ATG-ATTCT---AAACGCATTTTAGCCTGC--------GTTTGAATCGTT-----------------TACCGTGTATCATTTACC--------TCT-CAT--CATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69066 : TACAGACCATAATTTGTTCAAGTACACCAA-A--ATTTCATTTCAAACACA------------TTTGCA---TT----TCTAAACGATAAGCA-TTG--GAATTAAATGCG----G-AAA---TGCA---TTTCA
gi|69067 : TACAGGCTGTAATGTGTTTAAGTACATCAA-A--AATACATTTGAAATGTA-------TTAG----AAG---TGTAATTG-AAAA-----ACA-TTTACA--TG--TTGCGTTT-ATAAA---TGTAAATTTTTA-----TTAATAAATGCATTTCCAG----T-TC-TTT------AT--AAATGT
gi|69068 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--
gi|69062 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCG-------CTCAGTTTGCACTCTG----TT----C-----GCGCTCT--G--TT--T
gi|69060 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--
gi|69069 : TACAGACCCTAAACCGCTCAAGTAC-CCAATA--ATTGCACTCCATTTGCG-------CTCAGTTTGC
gi|69070 : TACAGACCCTAAACCGTTCAAGAACCCCAT-A--ATTGCACTCCGTTTGCA-------TTCAGTTTGCG---
gi|69074 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCG-------CTCAGTTTGC
gi|69073 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCG-------CTCAGTTTGC
gi|69072 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCG-------CTCAGTTTGC
gi|69071 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCG-------CTCAGTTTGC
gi|69076 : TACAGACCGTAATCCGTTCAAGTGCACCAA-ACGAACGCA
gi|69075 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCA-------TTCAGTTTGC
gi|69058 : TACAGATCGTAATCCGTTCAAGTACACCAA-A--
gi|69056 : TACAGACTGTAATCCGTTCAAGTACACCAA-A--
gi|69052 : TACAGACCGTAATCTGTTCAAGTACACCAA-A--
gi|69078 : TACAGACCCTAAACTGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCG-------CTCAGTTTGC
gi|69077 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTACG-------CTCAGTTTGC
gi|69079 : CAAACCGTTATCCGTTCAAGTA-----A-A--AATG------AATT------------------------------TC-AAAT-----GTG-TTT--G--TT--TTGCGCTT-C-AAA---TGCA---TTTTAG---TTTCATCGATG-GTTT
gi|69061 : GCAATCCATT--AACAAAACTA-A--AATGCATTTCAAACGCAAAACAAACGCGTTTGACA---CG----CA-AAAC-----GAA-C-------------GCATTT-G-AAA---TGCA---TTTT
gi|69080 : tacagaccgtaatctgttgaagtacaccaTTTAAGTACACC---A--AATGCTTTTCAAATGCA-------TT------------------TA-AAAA-----TTG-TTT--G--TA--ATGCATTT-G-AAATTTTGCA---TTTTA----------TATTT-ATTTACA-----T-TT-TGC--ACGTAT--AAACG---------AAATTTTTGTCGATAAAAGCGTTTCATGTTCAATTATAA-AC--ATAGTTTGAAATGAATTTGAATTTGCA--TTTATATTT-AAT-GTTTatttttttatgataaactttagagaaaatacgaaaatgcagttccaaacgatacttaaagctttttagcctgcgtttgcgtttgaattgtttagcgtgtattgtttaccatttaacgtttacacggcatgttcaccaatcgcatcatctcaggttgtccaattgta
gi|69053 : -AAAT-----GCG-TTC--A--CT--AT-CGTTTTG-AAC---TGCA---TTTTCGTATTTTCTCTAACG-TTTAACATAAAA----------ATA-ATGCAAACCATAAACA--AA----------ACTAAAATG---CA-TTTCA-----AACACA-A-AAC---AAACGCGTTTaccattcggtaatcacgtcatct
gi|69066 : tacagaccgtaatccgttcaagtacaccaaaaatgcatttcaattgtgttcgttttgcgtgtcTTTGCAT----T-TC-TAA--ACG-AT--AAGCATTGGA-ATTAAAT--------GCGGAAATG---CA-TTTCA-----tagtctgcgtttgcgttcgaatcgtttagcgtgtatcgtttaccgtgtatcttttaccatttaacgtttacacgacatgttcaccaatcgcatcatctctggttgtccaattgta
gi|69081 : tacagaccataatttgttcaagtacaccaaaatttcatttcaaacacaCGTTGGAGA--AAAT--------GCGAAAACG---CA-GTTCA-----AA-ACG-ATTAT---AAACGCATTTTAGCCTGCG--TTTGTGTTTGAATCGTTTACCGTGTATCGTTAAACACTGTGTA
gi|69065 : --------ACTAAAATG---CA--TTTA-----AA-ACGTAAAAC---AAATGCATTTGAA-ATGCAATTTTG
Alignments
lowQualScore : 0 0 1 1 22 1 1 22 1 55 555 3 77777 3 44 44 4 8 99 0 2 666 2 0
lowQualScore : . . . . .. . . .. . .. ... . ..... . .. .. . . .. . . ... . .
lowQualScore : 1 3 3 4 00 0 8 55 8 88 000 1 77777 1 22 22 0 0 55 5 8 444 0 7
consensus : TACAGACCGTAATCCGTTCAAGTACACCAA-A--ANTGCACTCCGNTTGCGCTCGGTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGCCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
Reference ( family-633 ) : TACAGACCGTAATCCGTTCAAGTACACCAA-A--ANTGCACTCCGNTTGCGCTCGGTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGCCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69051 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGCGTTCGTTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAATGCATTTTAACCTGCATTTGCGTTCGAATCGTTTTGCATGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69052 : TACAGACCGTAATCTGTTCAAGTACACCAA-A--
gi|69053 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGTGTTCGTTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGTGTTTGAAATGCATTTTAGTTTTGTTTATGGTTTGCATTATT-TTT--ATGTTAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGTCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69054 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAACTGCGTTCGTTTTGCG---TGTC-AAAC-----ACG-TTTG--TT--TTATGTTTGAAATGCATTTTAGTTTTGTTGATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACAAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGTCTGCGTTTGCGTTCGAATCGTTTAACGTGTATCGTT---TACCGTGTATCATTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCTAATTGTA
gi|69055 : TAAAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAGTTGCGTTCATTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TTTTTT--ATGACAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAATGCATTTTAACCTGCGTTTGCGTTCGAATCGTTTTGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTCATTGTCCAATTATA
gi|69056 : TACAGACTGTAATCCGTTCAAGTACACCAA-A--
gi|69057 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCATTTGCGTTCGTTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGTGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTTT-ATTATAAACGTCAGAGAAAATACGAAATTGCAGTTAAAAAGGATAGTGAACGCATTTTAACCTGCGTTTGCGTTCAAATCGTTTAGCGTGTATCGTT---TACCATGTATCTTTTACCATTAAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69058 : TACAGATCGTAATCCGTTCAAGTACACCAA-A--
gi|69059 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGCG--------------------------------TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTTGTTAATAGTTTGCATT-TTTTTT--ATGATAAATGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGTCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69060 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--
gi|69061 : TACAGACCGTAATCTGTTGAAGTACACCAA-A--AATGCATTTCAAATGCGTTCGTTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTTGTTAATGGATTGCATT-TT-TTT--ATGATAAACTTTAGAGAAAATACGAAAATGCAGTTCCAAACGATACTTAAAGCTTTTTAGCCTGCGTTTGCGTTTGAATTGTTTAGCGTGTATTGTT---TACC--------------ATTTAACGTTTACACGGCATGTTCACCAATCGCATCATCTCAGGTTGTCCAATTGTA
gi|69062 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGCACTCTGTT----C-----GCGCTCTG--TT--T
gi|69063 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGCGTTCGTTTTGCG---TGTC-AAAT-----GCA-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTTTGATGATAAACGTTAGAGAAAATACG--TTTGTA-TTCGAATCG-------------TTTAG--TGTGT----------ATCGTTTA-----------------CCGTGTATCTTTTACCATTTAACATTTGCACGACATGTTCACCAATCGCATCATCTCTTGTTGTCCAATTGTA
gi|69064 : TACAGACCATAATCTGTTCAAGTACACCAA-A--AATGCATTTCAAATGTGTTTGTTTTGCG---TGTC-AAAC-----GCA-ATTG--TT--TTGCATTTCAAATACATTTTAGTTTCGTTTATGGTTTGCAT----------------------AAAAAAAATGCGAAAATGCAGTTCAAAACGATACTAAACGCATTTTAGCCTGAATCTGCATTCAAATCGTTTACCATGTATCATT---TATCA---A-----TACCATTTATCGTTTACACTGCGTGCTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69065 : TACAGACCGTAATCTGTTCAAGTACACCAA-A--ATTGCATT-------------------------TC-AAAT-----GCA-TTTG--TT--TTACGTTTTAAATGCATTTTAGTTTCATTGATGGTTTGCATT-TT-TTT--CTGATAAATGTTAGAGAAATAATGAAAATTCAGTTCAAAATGATTCTAAACGCATTTTAGCCTGCGTTT------GAATCGTTTACCGTGTATCATT---TACC-----TCT-----CAT---------------CATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69066 : TACAGACCATAATTTGTTCAAGTACACCAA-A--ATTTCATTTCAA--ACAC---ATTTGCA---TTTCTAAACGATAAGCA-TTGGAATTAAATGCG---GAAATGCATTTCA
gi|69068 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--
gi|69069 : TACAGACCCTAAACCGCTCAAGTAC-CCAATA--ATTGCACTCCATTTGCGCTCAGTTTGC
gi|69070 : TACAGACCCTAAACCGTTCAAGAACCCCAT-A--ATTGCACTCCGTTTGCATTCAGTTTGCG---
gi|69071 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69072 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69073 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69074 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69075 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCATTCAGTTTGC
gi|69076 : TACAGACCGTAATCCGTTCAAGTGCACCAA-ACGAACGCA
gi|69077 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTACGCTCAGTTTGC
gi|69078 : TACAGACCCTAAACTGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69079 : CAAACCGTTATCCGTTCAAGTA-----A-A--AATGAATT-------------------------TC-AAAT-----GTG-TTTG--TT--TTGCGCTTCAAATGCATTTTAGTTTCATCGATGGTTT
gi|69081 : CGTTGGAGAAAATGCGAAAACGCAGTTCAAAACGATTATAAACGCATTTTAGCCTGCGTTTGTGTTTGAATCGTTTACCGTGTATCGTTAAACACTGTGTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|69067 ): TACAGGCTGTAATGTGTTTAAGTACATCAAAAATACATTTGAAATGTATTAGAAGTGTAATTGAAAAACATTTACATGTTGCGTTTATAAATGTAAATTTTTATTAATAAATGCATTTCCAGTTCTTTATAAATGT
Unaligned ( gi|69080 ): TTTAAGTACACCAAATGCTTTTCAAATGCATTTAAAAATTGTTTGTAATGCATTTGAAATTTTGCATTTTATATTTATTTACATTTTGCACGTATAAACGAAATTTTTGTCGATAAAAGCGTTTCATGTTCAATTATAAACATAGTTTGAAATGAATTTGAATTTGCATTTATATTTAATGTTTACCATTCGGTAATCACGTCATCT
Alignments
lowQualScore : 0 0 1 1 22 1 1 22 1 55 555 3 77777 3 44 44 4 8 99 0 2 666 2 0
lowQualScore : . . . . .. . . .. . .. ... . ..... . .. .. . . .. . . ... . .
lowQualScore : 1 3 3 4 00 0 8 55 8 88 000 1 77777 1 22 22 0 0 55 5 8 444 0 7
consensus : TACAGACCGTAATCCGTTCAAGTACACCAA-A--ANTGCACTCCGNTTGCGCTCGGTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGCCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
Reference ( family-633 ) : TACAGACCGTAATCCGTTCAAGTACACCAA-A--ANTGCACTCCGNTTGCGCTCGGTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGCCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69051 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGCGTTCGTTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAATGCATTTTAACCTGCATTTGCGTTCGAATCGTTTTGCATGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69052 : TACAGACCGTAATCTGTTCAAGTACACCAA-A--
gi|69053 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGTGTTCGTTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGTGTTTGAAATGCATTTTAGTTTTGTTTATGGTTTGCATTATT-TTT--ATGTTAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGTCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69054 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAACTGCGTTCGTTTTGCG---TGTC-AAAC-----ACG-TTTG--TT--TTATGTTTGAAATGCATTTTAGTTTTGTTGATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACAAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGTCTGCGTTTGCGTTCGAATCGTTTAACGTGTATCGTT---TACCGTGTATCATTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCTAATTGTA
gi|69055 : TAAAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAGTTGCGTTCATTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TTTTTT--ATGACAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAATGCATTTTAACCTGCGTTTGCGTTCGAATCGTTTTGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTCATTGTCCAATTATA
gi|69056 : TACAGACTGTAATCCGTTCAAGTACACCAA-A--
gi|69057 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCATTTGCGTTCGTTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGTGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTTT-ATTATAAACGTCAGAGAAAATACGAAATTGCAGTTAAAAAGGATAGTGAACGCATTTTAACCTGCGTTTGCGTTCAAATCGTTTAGCGTGTATCGTT---TACCATGTATCTTTTACCATTAAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69058 : TACAGATCGTAATCCGTTCAAGTACACCAA-A--
gi|69059 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGCG--------------------------------TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTTGTTAATAGTTTGCATT-TTTTTT--ATGATAAATGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGTCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69060 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--
gi|69061 : TACAGACCGTAATCTGTTGAAGTACACCAA-A--AATGCATTTCAAATGCGTTCGTTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTTGTTAATGGATTGCATT-TT-TTT--ATGATAAACTTTAGAGAAAATACGAAAATGCAGTTCCAAACGATACTTAAAGCTTTTTAGCCTGCGTTTGCGTTTGAATTGTTTAGCGTGTATTGTT---TACC--------------ATTTAACGTTTACACGGCATGTTCACCAATCGCATCATCTCAGGTTGTCCAATTGTA
gi|69062 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGCACTCTGTT----C-----GCGCTCTG--TT--T
gi|69063 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGCGTTCGTTTTGCG---TGTC-AAAT-----GCA-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTTTGATGATAAACGTTAGAGAAAATACG--TTTGTA-TTCGAATCG-------------TTTAG--TGTGT----------ATCGTTTA-----------------CCGTGTATCTTTTACCATTTAACATTTGCACGACATGTTCACCAATCGCATCATCTCTTGTTGTCCAATTGTA
gi|69064 : TACAGACCATAATCTGTTCAAGTACACCAA-A--AATGCATTTCAAATGTGTTTGTTTTGCG---TGTC-AAAC-----GCA-ATTG--TT--TTGCATTTCAAATACATTTTAGTTTCGTTTATGGTTTGCAT----------------------AAAAAAAATGCGAAAATGCAGTTCAAAACGATACTAAACGCATTTTAGCCTGAATCTGCATTCAAATCGTTTACCATGTATCATT---TATCA---A-----TACCATTTATCGTTTACACTGCGTGCTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69065 : TACAGACCGTAATCTGTTCAAGTACACCAA-A--ATTGCATT-------------------------TC-AAAT-----GCA-TTTG--TT--TTACGTTTTAAATGCATTTTAGTTTCATTGATGGTTTGCATT-TT-TTT--CTGATAAATGTTAGAGAAATAATGAAAATTCAGTTCAAAATGATTCTAAACGCATTTTAGCCTGCGTTT------GAATCGTTTACCGTGTATCATT---TACC-----TCT-----CAT---------------CATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69066 : TACAGACCATAATTTGTTCAAGTACACCAA-A--ATTTCATTTCAA--ACAC---ATTTGCA---TTTCTAAACGATAAGCA-TTGGAATTAAATGCG---GAAATGCATTTCA
gi|69068 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--
gi|69069 : TACAGACCCTAAACCGCTCAAGTAC-CCAATA--ATTGCACTCCATTTGCGCTCAGTTTGC
gi|69070 : TACAGACCCTAAACCGTTCAAGAACCCCAT-A--ATTGCACTCCGTTTGCATTCAGTTTGCG---
gi|69071 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69072 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69073 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69074 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69075 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCATTCAGTTTGC
gi|69076 : TACAGACCGTAATCCGTTCAAGTGCACCAA-ACGAACGCA
gi|69077 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTACGCTCAGTTTGC
gi|69078 : TACAGACCCTAAACTGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69079 : CAAACCGTTATCCGTTCAAGTA-----A-A--AATGAATT-------------------------TC-AAAT-----GTG-TTTG--TT--TTGCGCTTCAAATGCATTTTAGTTTCATCGATGGTTT
gi|69081 : CGTTGGAGAAAATGCGAAAACGCAGTTCAAAACGATTATAAACGCATTTTAGCCTGCGTTTGTGTTTGAATCGTTTACCGTGTATCGTTAAACACTGTGTA
blockSeqs : A T CG A T AA T GT CTC T GATAA C AA AA A T TG G AAA G
blockSeqs : A . . A T AA T GT . . . . . . . T T A . G
blockSeqs : A . . A T AG T AT . . . . . . . . . G . G
blockSeqs : A . . A T AT T GT . . . . . . . . . G . A
blockSeqs : A . . A T AA T GT . . . . . . . . . G . G
blockSeqs : A . . A T AA C AG . . . . . . . . . G . G
blockSeqs : A . . T C GT T GT . . . . . . . . . C . A
blockSeqs : A . . A T AA T GT . . . . . . . . . C . G
blockSeqs : A . . A T AA C AG . . . . . . . . . C . .
blockSeqs : A . . T T AA C AG . . . . . . . . .
blockSeqs : C . . T C AT T AG . . . . . .
blockSeqs : A . . T C GT C AG . . . . . .
blockSeqs : A . . T C GT C AG .
blockSeqs : A . . T C GT C AG
blockSeqs : A . . T C GT C AG
blockSeqs : A . . T C GT T AG
blockSeqs : C . . T C GT C AG
blockSeqs : C . . T C GT C A
blockSeqs : C . . A C GT . .
blockSeqs : C . . T . . . .
blockSeqs : C . . T . . . .
blockSeqs : C . . A
blockSeqs : A . .
blockSeqs : C . .
blockSeqs : C . .
blockSeqs : . . .
blockSeqs : . . .
blockSeqCons :
originalCons : TACAGACCGTAATCCGTTCAAGTACACCAA-A--ANTGCACTCCGNTTGCGCTCGGTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGCCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
finalCons : TACAGACCGTAATCCGTTCAAGTACACCAA-A--ANTGCACTCCGNTTGCGCTCGGTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGCCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|69067 ): TACAGGCTGTAATGTGTTTAAGTACATCAAAAATACATTTGAAATGTATTAGAAGTGTAATTGAAAAACATTTACATGTTGCGTTTATAAATGTAAATTTTTATTAATAAATGCATTTCCAGTTCTTTATAAATGT
Unaligned ( gi|69080 ): TTTAAGTACACCAAATGCTTTTCAAATGCATTTAAAAATTGTTTGTAATGCATTTGAAATTTTGCATTTTATATTTATTTACATTTTGCACGTATAAACGAAATTTTTGTCGATAAAAGCGTTTCATGTTCAATTATAAACATAGTTTGAAATGAATTTGAATTTGCATTTATATTTAATGTTTACCATTCGGTAATCACGTCATCT
Alignments
lowQualScore : 0 0 1 1 22 1 1 22 1 55 555 3 77777 3 44 44 4 8 99 0 2 666 2 0
lowQualScore : . . . . .. . . .. . .. ... . ..... . .. .. . . .. . . ... . .
lowQualScore : 1 3 3 4 00 0 8 55 8 88 000 1 77777 1 22 22 0 0 55 5 8 444 0 7
consensus : TACAGACCGTAATCCGTTCAAGTACACCAA-A--ANTGCACTCCGNTTGCGCTCGGTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGCCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
Reference ( family-633 ) : TACAGACCGTAATCCGTTCAAGTACACCAA-A--ANTGCACTCCGNTTGCGCTCGGTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGCCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69051 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGCGTTCGTTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAATGCATTTTAACCTGCATTTGCGTTCGAATCGTTTTGCATGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69052 : TACAGACCGTAATCTGTTCAAGTACACCAA-A--
gi|69053 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGTGTTCGTTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGTGTTTGAAATGCATTTTAGTTTTGTTTATGGTTTGCATTATT-TTT--ATGTTAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGTCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69054 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAACTGCGTTCGTTTTGCG---TGTC-AAAC-----ACG-TTTG--TT--TTATGTTTGAAATGCATTTTAGTTTTGTTGATGGTTTGCATT-TT-TTT--ATGATAAACGTTAGAGAAAATACAAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGTCTGCGTTTGCGTTCGAATCGTTTAACGTGTATCGTT---TACCGTGTATCATTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCTAATTGTA
gi|69055 : TAAAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAGTTGCGTTCATTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TTTTTT--ATGACAAACGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAATGCATTTTAACCTGCGTTTGCGTTCGAATCGTTTTGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTCATTGTCCAATTATA
gi|69056 : TACAGACTGTAATCCGTTCAAGTACACCAA-A--
gi|69057 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCATTTGCGTTCGTTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGTGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTTT-ATTATAAACGTCAGAGAAAATACGAAATTGCAGTTAAAAAGGATAGTGAACGCATTTTAACCTGCGTTTGCGTTCAAATCGTTTAGCGTGTATCGTT---TACCATGTATCTTTTACCATTAAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69058 : TACAGATCGTAATCCGTTCAAGTACACCAA-A--
gi|69059 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGCG--------------------------------TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTTGTTAATAGTTTGCATT-TTTTTT--ATGATAAATGTTAGAGAAAATACGAAAATGCAGTTCAAAACGATAGTGAACGCATTTTAGTCTGCGTTTGCGTTCGAATCGTTTAGCGTGTATCGTT---TACCGTGTATCTTTTACCATTTAACGTTTACACGACATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69060 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--
gi|69061 : TACAGACCGTAATCTGTTGAAGTACACCAA-A--AATGCATTTCAAATGCGTTCGTTTTGCG---TGTC-AAAC-----GCG-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTTGTTAATGGATTGCATT-TT-TTT--ATGATAAACTTTAGAGAAAATACGAAAATGCAGTTCCAAACGATACTTAAAGCTTTTTAGCCTGCGTTTGCGTTTGAATTGTTTAGCGTGTATTGTT---TACC--------------ATTTAACGTTTACACGGCATGTTCACCAATCGCATCATCTCAGGTTGTCCAATTGTA
gi|69062 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGCACTCTGTT----C-----GCGCTCTG--TT--T
gi|69063 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--AATGCATTTCAATTGCGTTCGTTTTGCG---TGTC-AAAT-----GCA-TTTG--TT--TTGCGTTTGAAATGCATTTTAGTTTCGTTAATGGTTTGCATT-TT-TTTTGATGATAAACGTTAGAGAAAATACG--TTTGTA-TTCGAATCG-------------TTTAG--TGTGT----------ATCGTTTA-----------------CCGTGTATCTTTTACCATTTAACATTTGCACGACATGTTCACCAATCGCATCATCTCTTGTTGTCCAATTGTA
gi|69064 : TACAGACCATAATCTGTTCAAGTACACCAA-A--AATGCATTTCAAATGTGTTTGTTTTGCG---TGTC-AAAC-----GCA-ATTG--TT--TTGCATTTCAAATACATTTTAGTTTCGTTTATGGTTTGCAT----------------------AAAAAAAATGCGAAAATGCAGTTCAAAACGATACTAAACGCATTTTAGCCTGAATCTGCATTCAAATCGTTTACCATGTATCATT---TATCA---A-----TACCATTTATCGTTTACACTGCGTGCTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69065 : TACAGACCGTAATCTGTTCAAGTACACCAA-A--ATTGCATT-------------------------TC-AAAT-----GCA-TTTG--TT--TTACGTTTTAAATGCATTTTAGTTTCATTGATGGTTTGCATT-TT-TTT--CTGATAAATGTTAGAGAAATAATGAAAATTCAGTTCAAAATGATTCTAAACGCATTTTAGCCTGCGTTT------GAATCGTTTACCGTGTATCATT---TACC-----TCT-----CAT---------------CATGTTCACCAATCGCATCATCTCTGGTTGTCCAATTGTA
gi|69066 : TACAGACCATAATTTGTTCAAGTACACCAA-A--ATTTCATTTCAA--ACAC---ATTTGCA---TTTCTAAACGATAAGCA-TTGGAATTAAATGCG---GAAATGCATTTCA
gi|69068 : TACAGACCGTAATCCGTTCAAGTACACCAA-A--
gi|69069 : TACAGACCCTAAACCGCTCAAGTAC-CCAATA--ATTGCACTCCATTTGCGCTCAGTTTGC
gi|69070 : TACAGACCCTAAACCGTTCAAGAACCCCAT-A--ATTGCACTCCGTTTGCATTCAGTTTGCG---
gi|69071 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69072 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69073 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69074 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69075 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCATTCAGTTTGC
gi|69076 : TACAGACCGTAATCCGTTCAAGTGCACCAA-ACGAACGCA
gi|69077 : TACAGACCCTAAACCGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTACGCTCAGTTTGC
gi|69078 : TACAGACCCTAAACTGCTCAAGTACCCCAT-A--ATTGCACTCCGTTTGCGCTCAGTTTGC
gi|69079 : CAAACCGTTATCCGTTCAAGTA-----A-A--AATGAATT-------------------------TC-AAAT-----GTG-TTTG--TT--TTGCGCTTCAAATGCATTTTAGTTTCATCGATGGTTT
gi|69081 : CGTTGGAGAAAATGCGAAAACGCAGTTCAAAACGATTATAAACGCATTTTAGCCTGCGTTTGTGTTTGAATCGTTTACCGTGTATCGTTAAACACTGTGTA
2 sequences could not be aligned to this reference sequence:
Unaligned ( gi|69067 ): TACAGGCTGTAATGTGTTTAAGTACATCAAAAATACATTTGAAATGTATTAGAAGTGTAATTGAAAAACATTTACATGTTGCGTTTATAAATGTAAATTTTTATTAATAAATGCATTTCCAGTTCTTTATAAATGT
Unaligned ( gi|69080 ): TTTAAGTACACCAAATGCTTTTCAAATGCATTTAAAAATTGTTTGTAATGCATTTGAAATTTTGCATTTTATATTTATTTACATTTTGCACGTATAAACGAAATTTTTGTCGATAAAAGCGTTTCATGTTCAATTATAAACATAGTTTGAAATGAATTTGAATTTGCATTTATATTTAATGTTTACCATTCGGTAATCACGTCATCT