lowQualScore : 1 11111 44444 11 222222222 222222222 111 1 1 1 2222222222 11111111111 1 1 1111 1 11111 11111111111 1
lowQualScore : 0 4 0 77777 44 3 1 2 6666 888888 88 11111 4 22 3 0 2 000000000 4 5 5 0 000000000 0 7777 111 8 5 5 5 2 5 0 5 55 5 3 3 0 1111111111 0 1 99999999999 4 6 5 1111 5 00000 66666666666 6 4 333 1 333 3 444 2 55 1 777 3 0 1 3 1 555555 99 1 3333 44 1 1 55
lowQualScore : . . . ..... .. . . . .... ...... .. ..... . .. . . . ......... . . . . ......... . .... ... . . . . . . . . .. . . . . .......... . . ........... . . . .... . ..... ........... . . ... . ... . ... . .. . ... . . . . . ...... .. . .... .. . . ..
lowQualScore : 8 0 3 99999 22 1 0 5 5555 444444 55 77777 0 66 0 1 5 000000000 5 0 0 4 000000000 1 0000 666 5 0 0 0 2 9 2 1 66 9 9 9 7 7777777777 6 6 00000000000 1 8 4 5555 8 00000 33333333333 8 8 333 7 000 5 888 2 11 2 000 4 4 7 6 7 000000 55 8 9999 66 9 9 22
consensus : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGC---G-ACATCCCTTCAAAAGATTTG--GTTG-ATTAGCGA----CATCCCTTAAG-----TGGC--CCG--ACATG-CCTTCC-CANCCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAA---------GTGA--C-CCCG--TGATCAATTGACCT-ATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAANGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACGTGAAGTCTATGTAGTATGTATG---CAATCAATCGGAACGAAACACTTAAT--A--AAGTGTGTCACGA----CC----ATTTCTCAGATCAAGACAACTAGAA--ATAGATCGC-A---GTGT-A---T-A-NTAAGGGC--NTTNTGCAAGTAAACAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCTA-GG----ATAAAATC-NCCACTTA-A-AACGGTTT--ATTTT
Reference ( gi|95042 ) : CAGGGTTTCCCCCAGAGTCAT-AACACATGTCGCATGC---C-ACATCCCTTCAAAAGATTTG--GTTG-ATTAGCAA----CATCCCTTAAG-----TGGC--CCGTTAAGTG-CCTTCC-GAACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAA---------GTGA--C-CCCA--TGATTAATTGACCT-ATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGATGTGTGCAGGTAAGCCAACCAGAACAAGTCATTTGAAGGTTACTCTACCTCAATATAGAAAGCAGTGTCCTGTGAAATTTCTTGATCCAAGATTGTTTTTCACAAGATATAAAATTGAC----TACTGACCAAGGTGTCGGCATT-----------ACCGTTCAATTGTTTCATTAACCTCCCAATCACGTAAAGTCTATGTAGTATGTATA---CAATCAATCTGAACGAAACACTTAAT--A--AAGTGTGTCACGG----TC----ATTTCTCAAATTAAGACAACTAGAA--ATAGATCGC-A---GTGT-A---T-A-GTAAGGGC--TTTATGCAAGTAAGCAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCTA-GA----ATAAAATC-CCCACTTA-A-AATGGTTT--ATTTT
gi|95043 : CAGGGTTTCCCCCAGAGTCAT-AACGCATGGCGCATGC---A-ACATACCTTCAAAAGATTTG--GTTG-ATTAGCGA----CATCTCTTAAG-----TGGC--CCG--ACATG-CCTTCC-GAACCATTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATTAGTA-AT-TAAACAA---------GTGA--C-CCTG--TGATCAATTGACCT-ATTTGACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGCACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATGTAAAATCGAC----TACTGACCAAGGTGTCAGCATT-----------ACCTTTCAATTGATTCATTTACCTCCCAATCACTTGAAGTCTATGTAGTATGTATG---CAATCAGTCGGAACCAAACACTTAAT--T--AAGTGTGTCACGG----CC----ATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-A---GTGT-A---G-A-GTAAGGGC--TTTATGCAAGTAAACAAAACAATG-AAATCGTAAA-GGATTTTCTC-AGCATCTTATTTCA------ACAAAGCTA-GA----ATAAAA
gi|95046 : CAGGGTTTCCCCCACAGTCAA-AAC-------GCATGT---C-ACATCCCTTCAAAAGATTTG--GTTG-ATTAGCGA----CATCCCTTAAG-----TGGC--CCGgttatccctttttatttt
gi|95044 : CAGGGTTTCCCCCAGAGTCAC-AACGCATGTTGCATGC---G-ACATCCCTTCAAAAGATTTG--GTTG-ATTAGCGA----CATCCCTTAAA-----TGGA--CTG--ACATG-CCTTCC-CACCCGTTGCCACTACCGTTAAATTATTCCG---------TTATACAAGCCCATCAGTA-AT-TAAACAA---------GTGA--C-CCCG--TGATCAGTTGGCCT-ATTTCACAGATTTGTC-ATTCACTCACAAGT-GTGAACTGGAGGTGTGTACAGGTTAGCCAATCAAAACAAGTCATTTGAAGGTTACTCCGCCTCAATAAAGAATGCAGTGTCCTGTGAAATTTCTTGATCCGAGATTG-TTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTTGGCATT-----------ACCTCTCAATTAGTTTATTAACCTCCAAATCACGTAAAGTCTGTGTAATATGTATAATGCAATCAATCGGAACGAAACATTTAAT--A--AAGTGTGTCACGA----CC----ACTTCTCAGATCAAGACAACTAGAA--ATAGACCGC-A---GTGC-A---T-A-GTAA-GGC--TTTATGCTAGTAAGCAAAACAATG-AAATTGTCAA-GGGTTTTTTC-AGCATCTTATTTCA------ACAAACATA-GA----ATAAAATC-CCCACTTA-A-AATGATTT--ATTTTannnnnnnnnncccttcaaaagatttggttgattagcgacatcccttaagtggcccgacatgccatccaaaccattgcccctaccgttagataatcccattacataagcccatcagtaattaaacaagtgaccctgtgatcaattgacctatttcacagacttgtcaatcacttgcaagtgtgaactggaggtgtgtacaggtaagccaatcagaacgagtcatttgaaggttactctgcctcaatatagaaagcggtgtcctgtgaaatttcttgattcaagattgtttttcacaagatataaaatcgactactgactaaggtgtcggcataacctttcaattgattcatttacctcccaatcaagtgaagtctatgtagtatgtatgcaatcaatcagaacgaaacacttaataaagagtgtcacaaccattttttagatcaagacaactagaaatagatcgcagtgtatagtaagctttatgcaagtaagcaaaacaaagaaaccgtaaagagttttctcagcatcttatttcaataaagctagaataaaatcccctcttaaaatggtttatttt
gi|95045 : CAAGGTTTCCCC-AGAGTCAT-AATGCATGTCGCTTGC---G-CCATCCCTTCAAAAGATTTG--GTTG-ATTAGCGA----CATCCCTTAAG-----TGGC--CCG--ACATA-CCTTCC-CTACCCTTGAGACTATTGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TTAACAA---------GTGA--C-TCCT--TGATCAATTCGCCT-CTTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAGCTGGAGGTGTGTAATTGTAAGCCAAACAGAATGAGTCATTTGAAGGTTACTCCACCTCAATGTAGAATGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGCCCAAGGTGTCGGCATT-----------ACCTTTCAGTTGATTCATTAACCTCCCAATCACGTGAAGACTGTATAGTATGTATG---CAATCAATCAGAACGAAACACCTAAT--A--AAGTGTGTCACGA----CC----ATTTCTCAGATCAAGACAACTAGAA--ATAGATCAC-A---GTAT-A---T-A-GTAA-GGC--TTTATGTAAGCAAGCAAAACAATG-AAATTGAAAAGGGGTTTTCTC-AGCATCATATTTCA------ACAAAGCTA-GA----ATAAAATC-CCCACTTA-A-AATGGTTT--ATTTT
gi|95047 : CAGGGTTTCCCCCAGAGTCAT------------CATGC---G-ACATCTCTTCAAAAGATTTG--GTTG-ATTAATGA----CATCCCTTAAG-----TGGC--CCG--ACATA-CCTTCC-CACCCGTTGCGACTACCATTAGATAGTCCCA---------TTACATTAGTCCACCAGTA-AT-TAAACAA---------G-------------------ACTGACCT-ATTTCACAGACTTGTC-AATCACTCGCAAGT-GCGAACTGGAT-TGTGTACAGGTGAGCCAATCAGAACAAGTCATTTGAAGGTTACTCTGCCTCAAAATAGAATGCGGTGTCCTGTGAAATTTCTTGACCCGAGATTGTTTT-CACAAGATTTAAAATCGCC----GACTGACCAAGGTGTAGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACATCAAGCGTATGTAGTTTGTATG---CAATCAATCAGAACGAAACACTTAAT--A--AAGTGTGTCACAG----CT----ATTTCTCAGATCAAAACAACTAGGA--ATAGATCGC-A---GTGT-A---T-A-GTAAGGGC--TTCATGCAAGTAAGCAAAACAATG-AAATCGTAAA-AG
gi|95048 : CAGGGGTTCCCCCAGAGTCAT-AACGCATGTCGCATGT---G-ACATCTCTTCAAAAGATTTG--GTTG-ATTAGCGA----CATCCCTTAA------TTGC--CC-TTAATTGACC------ACCCGGTGCGACTACCGTTTAAAAATCTCA-----------A-----------CAGTA-AG-TAAACAC---------GTGA--CACGCA--TGATCAATTGACCT-ATTTCACAGACTTGTC-AATCACTCACAAAT-GAGAATTGGAGTTGTGTACAGATAAGCCAATCAGAATGAGGCATTTGAAGGTTACTCCGCCTCAATATAGAATACGGTGTCCTGTGAAATTTCTTGATACGAGATTGTTTTTCACAAGATTTAAAATTGATTTAATATTGACAAAAGTGTTGGTATTAATTGGTTTGCACCTTTCATTTGATTCATTAACCTCCCAATCAAGTGAAGTCTATGTAGTATGTATG---TAATCAATCAGAATGAAACACTTAAT--A--AAGTGTGTCACAA----CC----ATTTCTCAGATCAAGACAACTAGAA--ATAGATCGCAA---GT-T-A---T-A-GTAAGGTC--TTTATGCAAGAAAGGAAAACAATG-AAATAGTAAA-CAGTTTTCTC-AGCA---TGTTTCA------ACAAAGCTA-GA----ATAAAATC-ATCACTTA-A-AACAGTTA--ATTTT
gi|95049 : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGT---G-ACATCCCTTCAAAAGATTTG--GTTG-ATTAGCGA----CATCCCTTAAG-----TGGC--CCG--ACATG-CATTCC-CACCTGTTGCGACTACCGTTATATAATCCCA---------TAACACAAGACCATCAGTA-AT-T-----------------GA--C-CCTG--TGATCAATTGACCT-ATTTCATAGACTTGTC-AATCACTTGCAAGT-G-GAACTGAAGGTGTGTACAGGTAAGCCAATCAGAACAAGTCATTTGAAGGTTACTCCGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATCCGAGA-------TCACAAGATATAACATCTAC----TACTGACCAAGGTGTCGGCATT-----------ACCATTCAACTGATTCATTTAC--CCTAATCACATGAAGTCTATGTAGTATGTATG---CAATCAATCGGAACGAAACACTTAAT--A--AAGTGTGTCACGT----CC----ATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-ATCGGT-T-A---T-A-GCA
gi|95050 : CAGGGTTTTCTCCGGAGTCAC-AATGCATTTCTCGTGT---G-ACTTGCCTTCAAAAAATTTC--AACGAATTTGCAA----TATCCCTTAAT-----TTCC--CCCTGATGTG-TCTT
gi|95051 : CAGAGTTCTCCCTAG-GCCATTACCGCATGTCG-GTTC---CGACATGTCTTCAA---ATCTGAAACTA-ATTTGTGA----CATCCCATAAA-----TCCT--CCG--ACATG-CCTTacc
gi|95052 : AGGGTTTCGTCCTG-GCC-T-AACGCATATTGCATGCATGC-A-ACCTCTTCAAAACGTTTG--GTTT-GTTTGCAATTTCCACACCTTGAG-----CGACTACCG-TAAG
gi|95053 : CATACTGCATG------GGATGCTTTGAAAATGTTTG--GTTG-ATTTGTGA----CATTCTTTAAATAATTTGACATCC-TTAA----TCTCCCAGAAACA-AGC-ATTACTGGTAGGTAATCCCACATTTGACGTTACTCAAG-TCATTAATAGATGTAAACAAAGAACATGCATGATGT-CTCAATTGATAAATAGACCCAATATCACCAAC-TGCCAAATCACACTTCAGTCCTG---TGGAG-TATGT-------AACCAACCAGAatcatccca
gi|95054 : gCATGTCGCATGC---G-ATATACTTCCACAGGACTTG--TTTG-AATTTCAT----CATCCTTTAAA-----TGAT--CCG
gi|95046 : CCCTTCAAAAGATTTG--GTTG-ATTAGCGA----CATCCCTTAAG-----TGGC--CCG--ACATG-CCATCC-AAACCATTGCCCCTACCGTTAGATAATCCCA---------TTACATAAGCCCATCAGTA-AT-TAAACAA---------GTGA--C-CCTG--TGATCAATTGACCT-ATTTCACAGACTTGTC-AATCACTTGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCTGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATTCAAGATTGTTTTTCACAAGATATAAAATCGAC----TACTGACTAAGGTGTCGGCATA-----------ACCTTTCAATTGATTCATTTACCTCCCAATCAAGTGAAGTCTATGTAGTATGTATG---CAATCAATCAGAACGAAACACTTAAT--A--AAGAGTGTCACAA----CC----ATTTTTTAGATCAAGACAACTAGAA--ATAGATCGC-A---GTGT-A---T-A-GTAA--GC--TTTATGCAAGTAAGCAAAACAAAG-AAACCGTAAA-GAGTTTTCTC-AGCATCTTATTTCA------ATAAAGCTA-GA----ATAAAATC-CCCTCTTA-A-AATGGTTT--ATTTTaca
gi|95055 : cagggtttcccccacagtcaaaacgcatgtcacatcccttcaaaagatttggttgattagcgacatcccttaagtggcccgannnnnnnnnnTGTTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCTCAATCATGTGAAATCTATGTAGTATGTATG---CAATTAGTTGGAACGAAACACTTAAT--A--AAGTGTGTCACGA----CC----ATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-A---GTGT-A---T-A-GTAAGGGC--TTTATGCAAGTAAGCAAAACAATG-AAATTGTAAA-GGGTTTTCTC-AGCATCTTAATTCA------ACAAAGCTA-GA----ATAAAATT-CCCACTTA-A-AATGGTTT--ATTTT
gi|95057 : gacaaTGTTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACTTTTCAATTGATTCATTAACCTCCCAATCACGTGAAATCTATGTTTCATGTATG---CAATCAAT---------------AAT-------GTTTGTTACGA----CC----ATTTCTCGGATCAAGATAACTGGAA--ATAGATCGC-A---GTGT-A---T-A-GTAAGAGC--TTTATGCAAGTAAGCAAAACAATG-AAATCATAAAGGGGTTTTCTC-AGCATCTTATTTCA------ACA
gi|95056 : gacaaTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTC--AATCACATGAAGTCTATGTAGTATGTATG---CAATCAATCGGAACGAAACACTTAATTAATTAAGTGTGTCACGA----CCGACCATTTCTCGGAACACGACAACTAGAA--ATAGCTTGC-A---GTGT-A---T-A-TTAGGGGC--TTAATGCAAGTAAGCAAAACAAAG-AAATCATAAA-GGGTTTTCTC-AGCATCTTATTTCA------GTAAAGCTA-GA----ATAAAATC-CCCACTTA-A-AATGGTTT--AATTT
gi|95059 : gacaatgCATTTAA------AAGTATGTCATGGAAGATA----ATCTCT----TTTGTCCAACTAATT--TTA-ATCGT-A---GTGTTA---TTA-TTGGGAGC--ATTTTACAAGTAAACAAAACAATGCAAAT-GTAAA-GGGTTTTCTC-AGTGTCTAATTTCA------ACAAA--TATGG----ATAAAATCACCTGC-TG-A-AATGGTTT--ATTTT
gi|95061 : ATCAAGACAACTAGAA--TTAGATCGT-A---GTCT-A---T-T-ATTGGGAC--ATTTTGCAAGTAAACAAAACAATG-AAATCGTAAA-AGATTATATC-AGGGTATT-TTTTA------ACAAAGCTA-GA----ATAAAATC-ACCACTTA-A-AACGATTT--ATTTT
gi|95058 : gATCAAGACAACTAGAA--TGAGATCGT-A---GTCT-A---T-T-ATTGGGAC--ATTTTGCAAGCAAACAAAACAATG-AAATCGTAAA-AGATTATATC-AGGGTCTT-TTTTA------ACAAAGCTA-GA----ATAAAATC-ACCACTTA-A-AACGATTT--ATTTT
gi|95062 : tcaggatacaccttccaaagattggcaggactgacactttcctattttgAAGGCAATTAGA----TATATGGA-A---GTGT-A---T-AAGTTAGGGC--ATAATGCAAGTAAACAAAACAATG-AAGTCGT
gi|95063 : GACAACTGAAA--TTAGATTGT-A---GTGT-AG--T-A-TTTTTGGC--ATTTTGCAAGTAAACAAAAC-----AAATTGCAAT-GGGTTATATC-AGCATATTATT
gi|95060 : ACAACTGAAC--TTAGAGTGT-A---ATGTTA---T-A-TTTTGTTC--ATTTTGCAAGTAAACAAAACAATG-AAATTGTCAA-GGGTTATATC-AGCATCTTATTTCA------ACAAAGCTA-GAGAGGATAAAATC-TCCACTTATATAATTATTT--
gi|95064 : taaagatttgcaggactgattcttcaCTGGAATTATA-ATTGT-A---GTGT-A---TTA-TTGAGAGC--ATTTTACAAGTAAACAAATCAGTG-CAATCGTGAA-GGGTTTTCTA-AGCATCTAATTTCA------ACAAATATA-GG----ATAAAATC-ACCACTTG-A-AATGGTTT--ATTTT
gi|95065 : TAG-TCGT-A---GTAT-A---TTA-TCGAGGGCATTTTAT--AAGTAAACAAAACAATG-CAATCTTAAA-GGGGTTTCTC-AGAATCTTAT-----------------TA-TT----ATAAAATC-ACCACTTG-A-AACGGTTT--ATTTT
gi|95066 : ATTGT-A---GTGT-A---TTA-TTGAGAGT--ATTTTACAAGTAAACAAAACAATG-CAATCGTAAA-GGGTTTTCTC-AGCATCTAATTTCA------ACAAATATA-GG----ATAAAATC-ACCACTTG-A-AACAGTTT--ATTTT
gi|95067 : ATCGT-A---GTGT-A---TTA-TTGAGACC--ATTTTACAAGTAAACTAATCAATG-CAATCATAAA-GGGTTTTCTG-AGCATCTTATTTCA------ACAAATATA-GG----ATAAAATC-ACCACTTA-A-AACGGTTT--ATTTT
gi|95068 : ATCAT-A---GTAT-A---TTA-TTGAGGGC--ATTTTGCAAGAGAAAAAAACA-TG-CGATCGTAAA-GGGTTTTCTC-AGCATCTAATTTCA------ACTAAGATA-GG----ATAAAATC-ACCATTTG-A-AATGGTTT--ATTTT
gi|95069 : ATTGT-A---GTGT-A---TTA-TTGAGACC--ATTTTACAAGTAAACAAATCGATG-CAATAGCAAA-GGGTTTTTTTGAACATCTTATTTCA------ATAAATATA-GG----ATAAAATC-ACCACTTA-A-AATGTTTT--ATTTT
gi|95070 : TCGC-A---CTTT-AACTT-A-TTAAGGGC--ATTTTGTAAGTAAATAAA----TG-AAATCACAAA-GGGTTATATT-GGCATCTTATTTCATTAATAACAAAGCTT-GG----ATAAAATC-CCAACTTA-A-ATTGGTTT--ATTTT
gi|95071 : --TTTA--CAAGTAAACAAATCGATG-CAATCGTAAA-AGATTTTCTG-A-CATCTAATTGCA------ACAAATATA-GG----ATAAAATC-ACCACTTA-A-AACGGTTT--ATTTT
gi|95073 : TTTCTC-AGCATCTTATTTCA------ACA--------A----ATAAAATC-CCAACTTA-A-AATGGTTT--
gi|95072 : ggTTTCTC-AGGATCTTATTTCA------ACAAA------------TAAAATC-CCCACTTA-A-AACGGTTTAAATTTT
gi|95074 : ggTTTATC-AGCATCTTATTTCA------ACAAA------------TATAATC-CCCACTTA-A-AATGGTTTAAATTTT
Alignments
lowQualScore : 111111111 111111111 11111111111 1
lowQualScore : 3 3 2 33 2 0 33 33 3 88888 666 4 0 666666666 2 4 4 8 0 9999 777777777 4 4 1 0 1 0 888888888 0 77777777777 666 0 77777 3 6666 6666 33 1 3 444 2 22 1 1 1 1 3 1 444444 77 3333 1 1 1 1 0 55
lowQualScore : . . . .. . . .. .. . ..... ... . . ......... . . . . . .... ......... . . . . . . ......... . ........... ... . ..... . .... .... .. . . ... . .. . . . . . . ...... .. .... . . . . . ..
lowQualScore : 6 1 9 99 9 3 99 99 1 33333 444 9 7 000000000 9 4 4 9 9 4444 888888888 4 4 0 1 0 3 999999999 5 33333333333 444 4 11111 1 5555 5555 11 7 5 888 2 77 2 0 0 7 5 6 888888 22 7777 7 3 7 0 6 00
consensus : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCT-----TCCC---AACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAANGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACGTGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AN-TAAGGGCNTTNTGCAAGTAAACAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GGATAAAA-TCNCCACTTAAAACGGTTT--ATTTT
Reference ( family-610 ) : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCT-----TCCC---ANCCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAANGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACGTGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AN-TAAGGGCNTTNTGCAAGTAAACAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GGATAAAA-TCNCCACTTAAAACGGTTT--ATTTT
gi|95042 : CAGGGTTTCCCCCAGAGTCAT-AACACATGTCGCATGCC-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCAACATCCCTTAAGTGGCCC--GTTAAGTGCCT-----TCCG---AACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCATGA----TTAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGATGTGTGCAGGTAAGCCAACCAGAACAAGTCATTTGAAGGTTACTCTACCTCAATATAGAAAGCAGTGTCCTGTGAAATTTCTTGATCCAAGATTGTTTTTCACAAGATATAAAATTGAC----TACTGACCAAGGTGTCGGCATT-----------ACCGTTCAATTGTTTCATTAACCTCCCAATCACGTAAAGTCTATGTAGTATGT---ATACAATCAATCTGAACGAAACACTTAAT--A--AAG-TGTGTCACG----GT----CATTTCTCAAATTAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AG-TAAGGGCTTTATGCAAGTAAGCAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GAATAAAA-TCCCCACTTAAAATGGTTT--ATTTT
gi|95043 : CAGGGTTTCCCCCAGAGTCAT-AACGCATGGCGCATGCA-ACATAC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCTCTTAAGTGGCCC--G--ACATGCCT-----TCCG---AACCATTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATTAGTA-AT-TAAACAAGTGAC-CCTGTGA----TCAATTGA---------CCTATTTGACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGCACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATGTAAAATCGAC----TACTGACCAAGGTGTCAGCATT-----------ACCTTTCAATTGATTCATTTACCTCCCAATCACTTGAAGTCTATGTAGTATGT---ATGCAATCAGTCGGAACCAAACACTTAAT--T--AAG-TGTGTCACG----GC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-AGTGT-A---G-AG-TAAGGGCTTTATGCAAGTAAACAAAACAATG-AAATCGTAAA-GGATTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GAATAAAAGTTATCCCTT-------TTT--ATTTT
gi|95044 : CAGGGTTTCCCCCAGAGTCAC-AACGCATGTTGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAATGGACT--G--ACATGCCT-----TCCC---ACCCGTTGCCACTACCGTTAAATTATTCCG---------TTATACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAGTTGG---------CCTATTTCACAGATTTGTC-ATTCACTCACAAGT-GTGAACTGGAGGTGTGTACAGGTTAGCCAATCAAAACAAGTCATTTGAAGGTTACTCCGCCTCAATAAAGAATGCAGTGTCCTGTGAAATTTCTTGATCCGAGATTG-TTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTTGGCATT-----------ACCTCTCAATTAGTTTATTAACCTCCAAATCACGTAAAGTCTGTGTAATATGTATAATGCAATCAATCGGAACGAAACATTTAAT--A--AAG-TGTGTCACG----AC----CACTTCTCAGATCAAGACAACTAGAA--ATAGACCGC-AGTGC-A---T-AG-TAA-GGCTTTATGCTAGTAAGCAAAACAATG-AAATTGTCAA-GGGTTTTTTC-AGCATCTTATTTCA------ACAAACAT----A-GAATAAAA-TCCCCACTTAAAATGATTT--ATTTT
gi|95045 : CAAGGTTTCCCC-AGAGTCAT-AATGCATGTCGCTTGCG-CCATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATACCT-----TCCC---TACCCTTGAGACTATTGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TTAACAAGTGAC-TCCTTGA----TCAATTCG---------CCTCTTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAGCTGGAGGTGTGTAATTGTAAGCCAAACAGAATGAGTCATTTGAAGGTTACTCCACCTCAATGTAGAATGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGCCCAAGGTGTCGGCATT-----------ACCTTTCAGTTGATTCATTAACCTCCCAATCACGTGAAGACTGTATAGTATGT---ATGCAATCAATCAGAACGAAACACCTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCAC-AGTAT-A---T-AG-TAA-GGCTTTATGTAAGCAAGCAAAACAATG-AAATTGAAAAGGGGTTTTCTC-AGCATCATATTTCA------ACAAAGCT----A-GAATAAAA-TCCCCACTTAAAATGGTTT--ATTTT
gi|95046 : CAGGGTTTCCCCCACAGTCAA-AACGCATGTC--------ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--A
gi|95046 : CC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCA-----TCCA---AACCATTGCCCCTACCGTTAGATAATCCCA---------TTACATAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCTGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTTGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCTGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATTCAAGATTGTTTTTCACAAGATATAAAATCGAC----TACTGACTAAGGTGTCGGCATA-----------ACCTTTCAATTGATTCATTTACCTCCCAATCAAGTGAAGTCTATGTAGTATGT---ATGCAATCAATCAGAACGAAACACTTAAT--A--AAG-AGTGTCACA----AC----CATTTTTTAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AG-TAA--GCTTTATGCAAGTAAGCAAAACAAAG-AAACCGTAAA-GAGTTTTCTC-AGCATCTTATTTCA------ATAAAGCT----A-GAATAAAA-TCCCCTCTTAAAATGGTTT--ATTTTnnnnnnnnnncccttcaaaagatttggttgattagcgacatcccttaagtggcccgacatgccatccaaaccattgcccctaccgttagataatcccattacataagcccatcagtaattaaacaagtgaccctgtgatcaattgacctatttcacagacttgtcaatcacttgcaagtgtgaactggaggtgtgtacaggtaagccaatcagaacgagtcatttgaaggttactctgcctcaatatagaaagcggtgtcctgtgaaatttcttgattcaagattgtttttcacaagatataaaatcgactactgactaaggtgtcggcataacctttcaattgattcatttacctcccaatcaagtgaagtctatgtagtatgtatgcaatcaatcagaacgaaacacttaataaagagtgtcacaaccattttttagatcaagacaactagaaatagatcgcagtgtatagtaagctttatgcaagtaagcaaaacaaagaaaccgtaaagagttttctcagcatcttatttcaataaagctagaataaaatcccctcttaaaatggtttatttt
gi|95047 : cagggtttcccccacagtcaaaacgcatgtcacatcccttcaaaagatttggttgattagcgacatcccttaagtggcccgannnnnnnnnnCAGGGTTTCCCCCAGAGTCAT------------CATGCG-ACATCT-CTTCAAAAGATTTGG--TTG-ATTAATGACATCCCTTAAGTGGCCC--G--ACATACCT-----TCCC---ACCCGTTGCGACTACCATTAGATAGTCCCA---------TTACATTAGTCCACCAGTA-AT-TAAACAAG-------------------ACTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GCGAACTGGAT-TGTGTACAGGTGAGCCAATCAGAACAAGTCATTTGAAGGTTACTCTGCCTCAAAATAGAATGCGGTGTCCTGTGAAATTTCTTGACCCGAGATTGTTTT-CACAAGATTTAAAATCGCC----GACTGACCAAGGTGTAGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACATCAAGCGTATGTAGTTTGT---ATGCAATCAATCAGAACGAAACACTTAAT--A--AAG-TGTGTCACA----GC----TATTTCTCAGATCAAAACAACTAGGA--ATAGATCGC-AGTGT-A---T-AG-TAAGGGCTTCATGCAAGTAAGCAAAACAATG-AAATCGTAAA-AG
gi|95048 : CAGGGGTTCCCCCAGAGTCAT-AACGCATGTCGCATGTG-ACATCT-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAATTGCCCT--T--A-AT---T-----GACC---ACCCGGTGCGACTACCGTTTAAAAATCTCA-----------A-----------CAGTA-AG-TAAACACGTGACACGCATGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCACAAAT-GAGAATTGGAGTTGTGTACAGATAAGCCAATCAGAATGAGGCATTTGAAGGTTACTCCGCCTCAATATAGAATACGGTGTCCTGTGAAATTTCTTGATACGAGATTGTTTTTCACAAGATTTAAAATTGATTTAATATTGACAAAAGTGTTGGTATTAATTGGTTTGCACCTTTCATTTGATTCATTAACCTCCCAATCAAGTGAAGTCTATGTAGTATGT---ATGTAATCAATCAGAATGAAACACTTAAT--A--AAG-TGTGTCACA----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGCAAGT-T-A---T-AG-TAAGGTCTTTATGCAAGAAAGGAAAACAATG-AAATAGTAAA-CAGTTTTCTC-AGCA---TGTTTCA------ACAAAGCT----A-GAATAAAA-TCATCACTTAAAACAGTTA--ATTTT
gi|95049 : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGTG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCAT-----TCCC---ACCTGTTGCGACTACCGTTATATAATCCCA---------TAACACAAGACCATCAGTA-AT---------TGAC-CCTGTGA----TCAATTGA---------CCTATTTCATAGACTTGTC-AATCACTTGCAAGT-G-GAACTGAAGGTGTGTACAGGTAAGCCAATCAGAACAAGTCATTTGAAGGTTACTCCGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATCCGAGA-------TCACAAGATATAACATCTAC----TACTGACCAAGGTGTCGGCATT-----------ACCATTCAACTGATTCATTTAC--CCTAATCACATGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----TC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-A
gi|95050 : CAGGGTTTTCTCCGGAGTCAC-AATGCATTTCTCGTGTG-ACTTGC-CTTCAAAAAATTTCA--ACGAATTTGCAATATCCCTTAATTTCCCCCTG--ATGTGTCT-----TACC---tcggttatagca
gi|95051 : CAGAGTTCTCCCTAG-GCCATTACCGCATGTCGGTTCCG-ACATGT-CTTCAAA---TCTGAAACTA-ATTTGTGACATCCCATAAATCCTCC--G--ACATGCCT-----T
gi|95052 : AGGGTTTCGTCCTG-GCC-T-AACGCATATTGCATGCATGCAACCTCTTCAAAACGTTTGG--TTT-GTTTGCAATTTCC-----------------ACA--CCT-----T--G---A------GCGACTACCGTAAGATCATCCCA---------
gi|95053 : GCATACTGCATGGG-A--TGC-TTTGAAAATGTTTGG--TTG-ATTTGTGACATTCTTTAAATAATTT--G--ACAT-CCTTAATCTCCCAGAAACAA--GC-ATTACTGGTAGGTAATCCCACATTTGACGTTACTCAAG-TCATTAATAGATGTAAACAAAGAACATGCATGATGTCTCAATTGATAAATAGACCCAATATCACCAAC-TGCCAAATCACACTTCAGTCCTG---TGGA-GTATGT-------AACCAACCAGA
gi|95054 : CATGTCGCATGCG-ATATAC-TTCCACAGGACTTGT--TTG-AATTTCATCATCCTTTAAATGATCC--G--ACA
gi|95055 : TGTTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCTCAATCATGTGAAATCTATGTAGTATGT---ATGCAATTAGTTGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-AGTGT-A---T-AG-TAAGGGCTTTATGCAAGTAAGCAAAACAATG-AAATTGTAAA-GGGTTTTCTC-AGCATCTTAATTCA------ACAAAGCT----A-GAATAAAA-TTCCCACTTAAAATGGTTT--ATTTT
gi|95056 : gacaaTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTC--AATCACATGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAATTAATTAAG-TGTGTCACG----ACCGACCATTTCTCGGAACACGACAACTAGAA--ATAGCTTGC-AGTGT-A---T-AT-TAGGGGCTTAATGCAAGTAAGCAAAACAAAG-AAATCATAAA-GGGTTTTCTC-AGCATCTTATTTCA------GTAAAGCT----A-GAATAAAA-TCCCCACTTAAAATGGTTT--AATTT
gi|95057 : gacaatgTGTTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACTTTTCAATTGATTCATTAACCTCCCAATCACGTGAAATCTATGTTTCATGT---ATGCAATCAAT---------------AAT-------G-TTTGTTACG----AC----CATTTCTCGGATCAAGATAACTGGAA--ATAGATCGC-AGTGT-A---T-AG-TAAGAGCTTTATGCAAGTAAGCAAAACAATG-AAATCATAAAGGGGTTTTCTC-AGCATCTTATTTCA------ACA
gi|95058 : gacaaGATCAAGACAACTAGAA--TGAGATCGT-AGTCT-A---T-TA-TTGGGACATTTTGCAAGCAAACAAAACAATG-AAATCGTAAA-AGATTATATC-AGGGTCTT-TTTTA------ACAAAGCT----A-GAATAAAA-TCACCACTTAAAACGATTT--ATTTT
gi|95059 : tcaggatacaccttccaaagattggcaggactgacactttcctattttCATTTAA------AAG-TATGTCATGGAAGAT----AATCTCTTTTGTC----CAACTAATT--TTA-ATCGT-AGTGTTA---TTAT-TGGGAGCATTTTACAAGTAAACAAAACAATGCAAAT-GTAAA-GGGTTTTCTC-AGTGTCTAATTTCA------ACAAA--T----ATGGATAAAA-TCACCTGCTGAAATGGTTT--ATTTT
gi|95060 : T--A--AAGATTTG-CAGG----AC----TGATTCT----TCAA--CAACTGAAC--TTAGAGTGT-AATGTTA---T-AT-TTTGTTCATTTTGCAAGTAAACAAAACAATG-AAATTGTCAA-GGGTTATATC-AGCATCTTATTTCA------ACAAAGCTAGAGA-GGATAAAA-TCTCCACTTA
gi|95061 : GATCAAGACAACTAGAA--TTAGATCGT-AGTCT-A---T-TA-TTGGGACATTTTGCAAGTAAACAAAACAATG-AAATCGTAAA-AGATTATATC-AGGGTATT-TTTTA------ACAAAGCT----A-GAATAAAA-TCACCACTTAAAACGATTT--ATTTTtataattattta
gi|95062 : AAGGCAATTAGA----TATATGGA-AGTGT-A---T-AAGTTAGGGCATAATGCAAGTAAACAAAACAATG-AAGTCGT
gi|95063 : GACAACTGAAA--TTAGATTGT-AGTGT-AG--T-AT-TTTTGGCATTTTGCAAGTAAACAAAAC-----AAATTGCAAT-GGGTTATATC-AGCATATTATT
gi|95064 : CTGGAATTATA-ATTGT-AGTGT-A---TTAT-TGAGAGCATTTTACAAGTAAACAAATCAGTG-CAATCGTGAA-GGGTTTTCTA-AGCATCTAATTTCA------ACAAATAT----A-GGATAAAA-TCACCACTTGAAATGGTTT--ATTTT
gi|95065 : TAG-TCGT-AGTAT-A---TTAT-CGAGGGCATTTTATAAGTAAACAAAACAATG-CAATCTTAAA-GGGGTTTCTC-AGAATCTTAT-----------------T----A-TTATAAAA-TCACCACTTGAAACGGTTT--ATTTT
gi|95066 : ATTGT-AGTGT-A---TTAT-TGAGAGTATTTTACAAGTAAACAAAACAATG-CAATCGTAAA-GGGTTTTCTC-AGCATCTAATTTCA------ACAAATAT----A-GGATAAAA-TCACCACTTGAAACAGTTT--ATTTT
gi|95067 : ATCGT-AGTGT-A---TTAT-TGAGACCATTTTACAAGTAAACTAATCAATG-CAATCATAAA-GGGTTTTCTG-AGCATCTTATTTCA------ACAAATAT----A-GGATAAAA-TCACCACTTAAAACGGTTT--ATTTT
gi|95068 : ATCAT-AGTAT-A---TTAT-TGAGGGCATTTTGCAAGAGAAAAAAACA-TG-CGATCGTAAA-GGGTTTTCTC-AGCATCTAATTTCA------ACTAAGAT----A-GGATAAAA-TCACCATTTGAAATGGTTT--ATTTT
gi|95069 : ATTGT-AGTGT-A---TTAT-TGAGACCATTTTACAAGTAAACAAATCGATG-CAATAGCAAA-GGGTTTTTTTGAACATCTTATTTCA------ATAAATAT----A-GGATAAAA-TCACCACTTAAAATGTTTT--ATTTT
gi|95070 : TCGC-ACTTT-AACTT-AT-TAAGGGCATTTTGTAAGTAAATAAA----TG-AAATCACAAA-GGGTTATATT-GGCATCTTATTTCATTAATAACAAAGCT----T-GGATAAAA-TCCCAACTTAAATTGGTTT--ATTTT
gi|95071 : TTTACAAGTAAACAAATCGATG-CAATCGTAAA-AGATTTTCTG-A-CATCTAATTGCA------ACAAATAT----A-GGATAAAA-TCACCACTTAAAACGGTTT--ATTTT
gi|95072 : TTTCTC-AGGATCTTATTTCA------ACAAA------------TAAAA-TCCCCACTTAAAACGGTTTAAATTTT
gi|95073 : ggTTTCTC-AGCATCTTATTTCA------ACAA------------ATAAAA-TCCCAACTTAAAATGGTTT--
gi|95074 : ggTTTATC-AGCATCTTATTTCA------ACAA------------ATATAA-TCCCCACTTAAAATGGTTTAAATTTT
Alignments
lowQualScore : 111111111 111111111 11111111111 1
lowQualScore : 3 3 2 33 2 0 33 33 3 88888 7777 0 666666666 2 4 4 8 0 9999 777777777 4 4 1 0 1 0 888888888 0 77777777777 666 0 77777 3 6666 6666 33 1 3 444 2 22 1 1 1 1 3 1 444444 77 3333 1 1 1 1 0 55
lowQualScore : . . . .. . . .. .. . ..... .... . ......... . . . . . .... ......... . . . . . . ......... . ........... ... . ..... . .... .... .. . . ... . .. . . . . . . ...... .. .... . . . . . ..
lowQualScore : 6 1 9 99 9 3 99 99 1 33333 6666 7 000000000 9 4 4 9 9 4444 888888888 4 4 0 1 0 3 999999999 5 33333333333 444 4 11111 1 5555 5555 11 7 5 888 2 77 2 0 0 7 5 6 888888 22 7777 7 3 7 0 6 00
consensus : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCTT-----CCCA---ACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAANGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACGTGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AN-TAAGGGCNTTNTGCAAGTAAACAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GGATAAAA-TCNCCACTTAAAACGGTTT--ATTTT
Reference ( family-610 ) : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCTT-----CCCA---ACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAANGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACGTGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AN-TAAGGGCNTTNTGCAAGTAAACAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GGATAAAA-TCNCCACTTAAAACGGTTT--ATTTT
gi|95042 : CAGGGTTTCCCCCAGAGTCAT-AACACATGTCGCATGCC-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCAACATCCCTTAAGTGGCCC--GTTAAGTGCCTT-----CCGA---ACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCATGA----TTAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGATGTGTGCAGGTAAGCCAACCAGAACAAGTCATTTGAAGGTTACTCTACCTCAATATAGAAAGCAGTGTCCTGTGAAATTTCTTGATCCAAGATTGTTTTTCACAAGATATAAAATTGAC----TACTGACCAAGGTGTCGGCATT-----------ACCGTTCAATTGTTTCATTAACCTCCCAATCACGTAAAGTCTATGTAGTATGT---ATACAATCAATCTGAACGAAACACTTAAT--A--AAG-TGTGTCACG----GT----CATTTCTCAAATTAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AG-TAAGGGCTTTATGCAAGTAAGCAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GAATAAAA-TCCCCACTTAAAATGGTTT--ATTTT
gi|95043 : CAGGGTTTCCCCCAGAGTCAT-AACGCATGGCGCATGCA-ACATAC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCTCTTAAGTGGCCC--G--ACATGCCTT-----CCGA---ACCATTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATTAGTA-AT-TAAACAAGTGAC-CCTGTGA----TCAATTGA---------CCTATTTGACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGCACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATGTAAAATCGAC----TACTGACCAAGGTGTCAGCATT-----------ACCTTTCAATTGATTCATTTACCTCCCAATCACTTGAAGTCTATGTAGTATGT---ATGCAATCAGTCGGAACCAAACACTTAAT--T--AAG-TGTGTCACG----GC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-AGTGT-A---G-AG-TAAGGGCTTTATGCAAGTAAACAAAACAATG-AAATCGTAAA-GGATTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GAATAAAAGTTATCCCTT-------TTT--ATTTT
gi|95044 : CAGGGTTTCCCCCAGAGTCAC-AACGCATGTTGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAATGGACT--G--ACATGCCTT-----CCCA---CCCGTTGCCACTACCGTTAAATTATTCCG---------TTATACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAGTTGG---------CCTATTTCACAGATTTGTC-ATTCACTCACAAGT-GTGAACTGGAGGTGTGTACAGGTTAGCCAATCAAAACAAGTCATTTGAAGGTTACTCCGCCTCAATAAAGAATGCAGTGTCCTGTGAAATTTCTTGATCCGAGATTG-TTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTTGGCATT-----------ACCTCTCAATTAGTTTATTAACCTCCAAATCACGTAAAGTCTGTGTAATATGTATAATGCAATCAATCGGAACGAAACATTTAAT--A--AAG-TGTGTCACG----AC----CACTTCTCAGATCAAGACAACTAGAA--ATAGACCGC-AGTGC-A---T-AG-TAA-GGCTTTATGCTAGTAAGCAAAACAATG-AAATTGTCAA-GGGTTTTTTC-AGCATCTTATTTCA------ACAAACAT----A-GAATAAAA-TCCCCACTTAAAATGATTT--ATTTT
gi|95045 : CAAGGTTTCCCC-AGAGTCAT-AATGCATGTCGCTTGCG-CCATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATACCTT-----CCCT---ACCCTTGAGACTATTGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TTAACAAGTGAC-TCCTTGA----TCAATTCG---------CCTCTTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAGCTGGAGGTGTGTAATTGTAAGCCAAACAGAATGAGTCATTTGAAGGTTACTCCACCTCAATGTAGAATGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGCCCAAGGTGTCGGCATT-----------ACCTTTCAGTTGATTCATTAACCTCCCAATCACGTGAAGACTGTATAGTATGT---ATGCAATCAATCAGAACGAAACACCTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCAC-AGTAT-A---T-AG-TAA-GGCTTTATGTAAGCAAGCAAAACAATG-AAATTGAAAAGGGGTTTTCTC-AGCATCATATTTCA------ACAAAGCT----A-GAATAAAA-TCCCCACTTAAAATGGTTT--ATTTT
gi|95046 : CAGGGTTTCCCCCACAGTCAA-AACGCATGTC--------ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--A
gi|95046 : CC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCAT-----CCAA---ACCATTGCCCCTACCGTTAGATAATCCCA---------TTACATAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCTGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTTGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCTGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATTCAAGATTGTTTTTCACAAGATATAAAATCGAC----TACTGACTAAGGTGTCGGCATA-----------ACCTTTCAATTGATTCATTTACCTCCCAATCAAGTGAAGTCTATGTAGTATGT---ATGCAATCAATCAGAACGAAACACTTAAT--A--AAG-AGTGTCACA----AC----CATTTTTTAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AG-TAA--GCTTTATGCAAGTAAGCAAAACAAAG-AAACCGTAAA-GAGTTTTCTC-AGCATCTTATTTCA------ATAAAGCT----A-GAATAAAA-TCCCCTCTTAAAATGGTTT--ATTTTnnnnnnnnnncccttcaaaagatttggttgattagcgacatcccttaagtggcccgacatgccatccaaaccattgcccctaccgttagataatcccattacataagcccatcagtaattaaacaagtgaccctgtgatcaattgacctatttcacagacttgtcaatcacttgcaagtgtgaactggaggtgtgtacaggtaagccaatcagaacgagtcatttgaaggttactctgcctcaatatagaaagcggtgtcctgtgaaatttcttgattcaagattgtttttcacaagatataaaatcgactactgactaaggtgtcggcataacctttcaattgattcatttacctcccaatcaagtgaagtctatgtagtatgtatgcaatcaatcagaacgaaacacttaataaagagtgtcacaaccattttttagatcaagacaactagaaatagatcgcagtgtatagtaagctttatgcaagtaagcaaaacaaagaaaccgtaaagagttttctcagcatcttatttcaataaagctagaataaaatcccctcttaaaatggtttatttt
gi|95047 : cagggtttcccccacagtcaaaacgcatgtcacatcccttcaaaagatttggttgattagcgacatcccttaagtggcccgannnnnnnnnnCAGGGTTTCCCCCAGAGTCAT------------CATGCG-ACATCT-CTTCAAAAGATTTGG--TTG-ATTAATGACATCCCTTAAGTGGCCC--G--ACATACCTT-----CCCA---CCCGTTGCGACTACCATTAGATAGTCCCA---------TTACATTAGTCCACCAGTA-AT-TAAACAAG-------------------ACTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GCGAACTGGAT-TGTGTACAGGTGAGCCAATCAGAACAAGTCATTTGAAGGTTACTCTGCCTCAAAATAGAATGCGGTGTCCTGTGAAATTTCTTGACCCGAGATTGTTTT-CACAAGATTTAAAATCGCC----GACTGACCAAGGTGTAGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACATCAAGCGTATGTAGTTTGT---ATGCAATCAATCAGAACGAAACACTTAAT--A--AAG-TGTGTCACA----GC----TATTTCTCAGATCAAAACAACTAGGA--ATAGATCGC-AGTGT-A---T-AG-TAAGGGCTTCATGCAAGTAAGCAAAACAATG-AAATCGTAAA-AG
gi|95048 : CAGGGGTTCCCCCAGAGTCAT-AACGCATGTCGCATGTG-ACATCT-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAATTGCCCT--T--A-AT---TG-----ACCA---CCCGGTGCGACTACCGTTTAAAAATCTCA-----------A-----------CAGTA-AG-TAAACACGTGACACGCATGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCACAAAT-GAGAATTGGAGTTGTGTACAGATAAGCCAATCAGAATGAGGCATTTGAAGGTTACTCCGCCTCAATATAGAATACGGTGTCCTGTGAAATTTCTTGATACGAGATTGTTTTTCACAAGATTTAAAATTGATTTAATATTGACAAAAGTGTTGGTATTAATTGGTTTGCACCTTTCATTTGATTCATTAACCTCCCAATCAAGTGAAGTCTATGTAGTATGT---ATGTAATCAATCAGAATGAAACACTTAAT--A--AAG-TGTGTCACA----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGCAAGT-T-A---T-AG-TAAGGTCTTTATGCAAGAAAGGAAAACAATG-AAATAGTAAA-CAGTTTTCTC-AGCA---TGTTTCA------ACAAAGCT----A-GAATAAAA-TCATCACTTAAAACAGTTA--ATTTT
gi|95049 : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGTG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCATT-----CCCA---CCTGTTGCGACTACCGTTATATAATCCCA---------TAACACAAGACCATCAGTA-AT---------TGAC-CCTGTGA----TCAATTGA---------CCTATTTCATAGACTTGTC-AATCACTTGCAAGT-G-GAACTGAAGGTGTGTACAGGTAAGCCAATCAGAACAAGTCATTTGAAGGTTACTCCGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATCCGAGA-------TCACAAGATATAACATCTAC----TACTGACCAAGGTGTCGGCATT-----------ACCATTCAACTGATTCATTTAC--CCTAATCACATGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----TC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-A
gi|95050 : CAGGGTTTTCTCCGGAGTCAC-AATGCATTTCTCGTGTG-ACTTGC-CTTCAAAAAATTTCA--ACGAATTTGCAATATCCCTTAATTTCCCCCTG--ATGTGTCTT-----ACCtcggttatagca
gi|95051 : CAGAGTTCTCCCTAG-GCCATTACCGCATGTCGGTTCCG-ACATGT-CTTCAAA---TCTGAAACTA-ATTTGTGACATCCCATAAATCCTCC--G--ACATGCCTT-----
gi|95052 : AGGGTTTCGTCCTG-GCC-T-AACGCATATTGCATGCATGCAACCTCTTCAAAACGTTTGG--TTT-GTTTGCAATTTCC-----------------ACA--CCTT--------G---A-----GCGACTACCGTAAGATCATCCCA---------
gi|95053 : GCATACTGCATGGG-A--TGC-TTTGAAAATGTTTGG--TTG-ATTTGTGACATTCTTTAAATAATTT--G--ACAT-CCTTAATCTCCCAGAAACAA--GC-ATTACTGGTAGGTAATCCCACATTTGACGTTACTCAAG-TCATTAATAGATGTAAACAAAGAACATGCATGATGTCTCAATTGATAAATAGACCCAATATCACCAAC-TGCCAAATCACACTTCAGTCCTG---TGGA-GTATGT-------AACCAACCAGA
gi|95054 : CATGTCGCATGCG-ATATAC-TTCCACAGGACTTGT--TTG-AATTTCATCATCCTTTAAATGATCC--G--ACA
gi|95055 : TGTTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCTCAATCATGTGAAATCTATGTAGTATGT---ATGCAATTAGTTGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-AGTGT-A---T-AG-TAAGGGCTTTATGCAAGTAAGCAAAACAATG-AAATTGTAAA-GGGTTTTCTC-AGCATCTTAATTCA------ACAAAGCT----A-GAATAAAA-TTCCCACTTAAAATGGTTT--ATTTT
gi|95056 : gacaaTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTC--AATCACATGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAATTAATTAAG-TGTGTCACG----ACCGACCATTTCTCGGAACACGACAACTAGAA--ATAGCTTGC-AGTGT-A---T-AT-TAGGGGCTTAATGCAAGTAAGCAAAACAAAG-AAATCATAAA-GGGTTTTCTC-AGCATCTTATTTCA------GTAAAGCT----A-GAATAAAA-TCCCCACTTAAAATGGTTT--AATTT
gi|95057 : gacaatgTGTTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACTTTTCAATTGATTCATTAACCTCCCAATCACGTGAAATCTATGTTTCATGT---ATGCAATCAAT---------------AAT-------G-TTTGTTACG----AC----CATTTCTCGGATCAAGATAACTGGAA--ATAGATCGC-AGTGT-A---T-AG-TAAGAGCTTTATGCAAGTAAGCAAAACAATG-AAATCATAAAGGGGTTTTCTC-AGCATCTTATTTCA------ACA
gi|95058 : gacaaGATCAAGACAACTAGAA--TGAGATCGT-AGTCT-A---T-TA-TTGGGACATTTTGCAAGCAAACAAAACAATG-AAATCGTAAA-AGATTATATC-AGGGTCTT-TTTTA------ACAAAGCT----A-GAATAAAA-TCACCACTTAAAACGATTT--ATTTT
gi|95059 : tcaggatacaccttccaaagattggcaggactgacactttcctattttCATTTAA------AAG-TATGTCATGGAAGAT----AATCTCTTTTGTC----CAACTAATT--TTA-ATCGT-AGTGTTA---TTAT-TGGGAGCATTTTACAAGTAAACAAAACAATGCAAAT-GTAAA-GGGTTTTCTC-AGTGTCTAATTTCA------ACAAA--T----ATGGATAAAA-TCACCTGCTGAAATGGTTT--ATTTT
gi|95060 : T--A--AAGATTTG-CAGG----AC----TGATTCT----TCAA--CAACTGAAC--TTAGAGTGT-AATGTTA---T-AT-TTTGTTCATTTTGCAAGTAAACAAAACAATG-AAATTGTCAA-GGGTTATATC-AGCATCTTATTTCA------ACAAAGCTAGAGA-GGATAAAA-TCTCCACTTA
gi|95061 : GATCAAGACAACTAGAA--TTAGATCGT-AGTCT-A---T-TA-TTGGGACATTTTGCAAGTAAACAAAACAATG-AAATCGTAAA-AGATTATATC-AGGGTATT-TTTTA------ACAAAGCT----A-GAATAAAA-TCACCACTTAAAACGATTT--ATTTTtataattattta
gi|95062 : AAGGCAATTAGA----TATATGGA-AGTGT-A---T-AAGTTAGGGCATAATGCAAGTAAACAAAACAATG-AAGTCGT
gi|95063 : GACAACTGAAA--TTAGATTGT-AGTGT-AG--T-AT-TTTTGGCATTTTGCAAGTAAACAAAAC-----AAATTGCAAT-GGGTTATATC-AGCATATTATT
gi|95064 : CTGGAATTATA-ATTGT-AGTGT-A---TTAT-TGAGAGCATTTTACAAGTAAACAAATCAGTG-CAATCGTGAA-GGGTTTTCTA-AGCATCTAATTTCA------ACAAATAT----A-GGATAAAA-TCACCACTTGAAATGGTTT--ATTTT
gi|95065 : TAG-TCGT-AGTAT-A---TTAT-CGAGGGCATTTTATAAGTAAACAAAACAATG-CAATCTTAAA-GGGGTTTCTC-AGAATCTTAT-----------------T----A-TTATAAAA-TCACCACTTGAAACGGTTT--ATTTT
gi|95066 : ATTGT-AGTGT-A---TTAT-TGAGAGTATTTTACAAGTAAACAAAACAATG-CAATCGTAAA-GGGTTTTCTC-AGCATCTAATTTCA------ACAAATAT----A-GGATAAAA-TCACCACTTGAAACAGTTT--ATTTT
gi|95067 : ATCGT-AGTGT-A---TTAT-TGAGACCATTTTACAAGTAAACTAATCAATG-CAATCATAAA-GGGTTTTCTG-AGCATCTTATTTCA------ACAAATAT----A-GGATAAAA-TCACCACTTAAAACGGTTT--ATTTT
gi|95068 : ATCAT-AGTAT-A---TTAT-TGAGGGCATTTTGCAAGAGAAAAAAACA-TG-CGATCGTAAA-GGGTTTTCTC-AGCATCTAATTTCA------ACTAAGAT----A-GGATAAAA-TCACCATTTGAAATGGTTT--ATTTT
gi|95069 : ATTGT-AGTGT-A---TTAT-TGAGACCATTTTACAAGTAAACAAATCGATG-CAATAGCAAA-GGGTTTTTTTGAACATCTTATTTCA------ATAAATAT----A-GGATAAAA-TCACCACTTAAAATGTTTT--ATTTT
gi|95070 : TCGC-ACTTT-AACTT-AT-TAAGGGCATTTTGTAAGTAAATAAA----TG-AAATCACAAA-GGGTTATATT-GGCATCTTATTTCATTAATAACAAAGCT----T-GGATAAAA-TCCCAACTTAAATTGGTTT--ATTTT
gi|95071 : TTTACAAGTAAACAAATCGATG-CAATCGTAAA-AGATTTTCTG-A-CATCTAATTGCA------ACAAATAT----A-GGATAAAA-TCACCACTTAAAACGGTTT--ATTTT
gi|95072 : TTTCTC-AGGATCTTATTTCA------ACAAA------------TAAAA-TCCCCACTTAAAACGGTTTAAATTTT
gi|95073 : ggTTTCTC-AGCATCTTATTTCA------ACAA------------ATAAAA-TCCCAACTTAAAATGGTTT--
gi|95074 : ggTTTATC-AGCATCTTATTTCA------ACAA------------ATATAA-TCCCCACTTAAAATGGTTTAAATTTT
Alignments
lowQualScore : 111111111 111111111 11111111111 1
lowQualScore : 3 3 2 33 2 0 33 33 3 88888 7777 0 666666666 2 4 4 8 0 9999 777777777 4 4 1 0 1 0 888888888 0 77777777777 666 0 77777 3 6666 6666 33 1 3 444 2 22 1 1 1 1 3 1 444444 77 3333 1 1 1 1 0 55
lowQualScore : . . . .. . . .. .. . ..... .... . ......... . . . . . .... ......... . . . . . . ......... . ........... ... . ..... . .... .... .. . . ... . .. . . . . . . ...... .. .... . . . . . ..
lowQualScore : 6 1 9 99 9 3 99 99 1 33333 6666 7 000000000 9 4 4 9 9 4444 888888888 4 4 0 1 0 3 999999999 5 33333333333 444 4 11111 1 5555 5555 11 7 5 888 2 77 2 0 0 7 5 6 888888 22 7777 7 3 7 0 6 00
consensus : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCTT-----CCCA---ACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAANGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACGTGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AN-TAAGGGCNTTNTGCAAGTAAACAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GGATAAAA-TCNCCACTTAAAACGGTTT--ATTTT
Reference ( family-610 ) : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCTT-----CCCA---ACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAANGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACGTGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AN-TAAGGGCNTTNTGCAAGTAAACAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GGATAAAA-TCNCCACTTAAAACGGTTT--ATTTT
gi|95042 : CAGGGTTTCCCCCAGAGTCAT-AACACATGTCGCATGCC-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCAACATCCCTTAAGTGGCCC--GTTAAGTGCCTT-----CCGA---ACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCATGA----TTAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGATGTGTGCAGGTAAGCCAACCAGAACAAGTCATTTGAAGGTTACTCTACCTCAATATAGAAAGCAGTGTCCTGTGAAATTTCTTGATCCAAGATTGTTTTTCACAAGATATAAAATTGAC----TACTGACCAAGGTGTCGGCATT-----------ACCGTTCAATTGTTTCATTAACCTCCCAATCACGTAAAGTCTATGTAGTATGT---ATACAATCAATCTGAACGAAACACTTAAT--A--AAG-TGTGTCACG----GT----CATTTCTCAAATTAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AG-TAAGGGCTTTATGCAAGTAAGCAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GAATAAAA-TCCCCACTTAAAATGGTTT--ATTTT
gi|95043 : CAGGGTTTCCCCCAGAGTCAT-AACGCATGGCGCATGCA-ACATAC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCTCTTAAGTGGCCC--G--ACATGCCTT-----CCGA---ACCATTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATTAGTA-AT-TAAACAAGTGAC-CCTGTGA----TCAATTGA---------CCTATTTGACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGCACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATGTAAAATCGAC----TACTGACCAAGGTGTCAGCATT-----------ACCTTTCAATTGATTCATTTACCTCCCAATCACTTGAAGTCTATGTAGTATGT---ATGCAATCAGTCGGAACCAAACACTTAAT--T--AAG-TGTGTCACG----GC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-AGTGT-A---G-AG-TAAGGGCTTTATGCAAGTAAACAAAACAATG-AAATCGTAAA-GGATTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GAATAAAAGTTATCCCTT-------TTT--ATTTT
gi|95044 : CAGGGTTTCCCCCAGAGTCAC-AACGCATGTTGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAATGGACT--G--ACATGCCTT-----CCCA---CCCGTTGCCACTACCGTTAAATTATTCCG---------TTATACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAGTTGG---------CCTATTTCACAGATTTGTC-ATTCACTCACAAGT-GTGAACTGGAGGTGTGTACAGGTTAGCCAATCAAAACAAGTCATTTGAAGGTTACTCCGCCTCAATAAAGAATGCAGTGTCCTGTGAAATTTCTTGATCCGAGATTG-TTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTTGGCATT-----------ACCTCTCAATTAGTTTATTAACCTCCAAATCACGTAAAGTCTGTGTAATATGTATAATGCAATCAATCGGAACGAAACATTTAAT--A--AAG-TGTGTCACG----AC----CACTTCTCAGATCAAGACAACTAGAA--ATAGACCGC-AGTGC-A---T-AG-TAA-GGCTTTATGCTAGTAAGCAAAACAATG-AAATTGTCAA-GGGTTTTTTC-AGCATCTTATTTCA------ACAAACAT----A-GAATAAAA-TCCCCACTTAAAATGATTT--ATTTT
gi|95045 : CAAGGTTTCCCC-AGAGTCAT-AATGCATGTCGCTTGCG-CCATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATACCTT-----CCCT---ACCCTTGAGACTATTGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TTAACAAGTGAC-TCCTTGA----TCAATTCG---------CCTCTTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAGCTGGAGGTGTGTAATTGTAAGCCAAACAGAATGAGTCATTTGAAGGTTACTCCACCTCAATGTAGAATGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGCCCAAGGTGTCGGCATT-----------ACCTTTCAGTTGATTCATTAACCTCCCAATCACGTGAAGACTGTATAGTATGT---ATGCAATCAATCAGAACGAAACACCTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCAC-AGTAT-A---T-AG-TAA-GGCTTTATGTAAGCAAGCAAAACAATG-AAATTGAAAAGGGGTTTTCTC-AGCATCATATTTCA------ACAAAGCT----A-GAATAAAA-TCCCCACTTAAAATGGTTT--ATTTT
gi|95046 : CAGGGTTTCCCCCACAGTCAA-AACGCATGTC--------ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--A
gi|95046 : CC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCAT-----CCAA---ACCATTGCCCCTACCGTTAGATAATCCCA---------TTACATAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCTGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTTGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCTGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATTCAAGATTGTTTTTCACAAGATATAAAATCGAC----TACTGACTAAGGTGTCGGCATA-----------ACCTTTCAATTGATTCATTTACCTCCCAATCAAGTGAAGTCTATGTAGTATGT---ATGCAATCAATCAGAACGAAACACTTAAT--A--AAG-AGTGTCACA----AC----CATTTTTTAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AG-TAA--GCTTTATGCAAGTAAGCAAAACAAAG-AAACCGTAAA-GAGTTTTCTC-AGCATCTTATTTCA------ATAAAGCT----A-GAATAAAA-TCCCCTCTTAAAATGGTTT--ATTTTnnnnnnnnnncccttcaaaagatttggttgattagcgacatcccttaagtggcccgacatgccatccaaaccattgcccctaccgttagataatcccattacataagcccatcagtaattaaacaagtgaccctgtgatcaattgacctatttcacagacttgtcaatcacttgcaagtgtgaactggaggtgtgtacaggtaagccaatcagaacgagtcatttgaaggttactctgcctcaatatagaaagcggtgtcctgtgaaatttcttgattcaagattgtttttcacaagatataaaatcgactactgactaaggtgtcggcataacctttcaattgattcatttacctcccaatcaagtgaagtctatgtagtatgtatgcaatcaatcagaacgaaacacttaataaagagtgtcacaaccattttttagatcaagacaactagaaatagatcgcagtgtatagtaagctttatgcaagtaagcaaaacaaagaaaccgtaaagagttttctcagcatcttatttcaataaagctagaataaaatcccctcttaaaatggtttatttt
gi|95047 : cagggtttcccccacagtcaaaacgcatgtcacatcccttcaaaagatttggttgattagcgacatcccttaagtggcccgannnnnnnnnnCAGGGTTTCCCCCAGAGTCAT------------CATGCG-ACATCT-CTTCAAAAGATTTGG--TTG-ATTAATGACATCCCTTAAGTGGCCC--G--ACATACCTT-----CCCA---CCCGTTGCGACTACCATTAGATAGTCCCA---------TTACATTAGTCCACCAGTA-AT-TAAACAAG-------------------ACTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GCGAACTGGAT-TGTGTACAGGTGAGCCAATCAGAACAAGTCATTTGAAGGTTACTCTGCCTCAAAATAGAATGCGGTGTCCTGTGAAATTTCTTGACCCGAGATTGTTTT-CACAAGATTTAAAATCGCC----GACTGACCAAGGTGTAGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACATCAAGCGTATGTAGTTTGT---ATGCAATCAATCAGAACGAAACACTTAAT--A--AAG-TGTGTCACA----GC----TATTTCTCAGATCAAAACAACTAGGA--ATAGATCGC-AGTGT-A---T-AG-TAAGGGCTTCATGCAAGTAAGCAAAACAATG-AAATCGTAAA-AG
gi|95048 : CAGGGGTTCCCCCAGAGTCAT-AACGCATGTCGCATGTG-ACATCT-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAATTGCCCT--T--A-AT---TG-----ACCA---CCCGGTGCGACTACCGTTTAAAAATCTCA-----------A-----------CAGTA-AG-TAAACACGTGACACGCATGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCACAAAT-GAGAATTGGAGTTGTGTACAGATAAGCCAATCAGAATGAGGCATTTGAAGGTTACTCCGCCTCAATATAGAATACGGTGTCCTGTGAAATTTCTTGATACGAGATTGTTTTTCACAAGATTTAAAATTGATTTAATATTGACAAAAGTGTTGGTATTAATTGGTTTGCACCTTTCATTTGATTCATTAACCTCCCAATCAAGTGAAGTCTATGTAGTATGT---ATGTAATCAATCAGAATGAAACACTTAAT--A--AAG-TGTGTCACA----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGCAAGT-T-A---T-AG-TAAGGTCTTTATGCAAGAAAGGAAAACAATG-AAATAGTAAA-CAGTTTTCTC-AGCA---TGTTTCA------ACAAAGCT----A-GAATAAAA-TCATCACTTAAAACAGTTA--ATTTT
gi|95049 : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGTG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCATT-----CCCA---CCTGTTGCGACTACCGTTATATAATCCCA---------TAACACAAGACCATCAGTA-AT---------TGAC-CCTGTGA----TCAATTGA---------CCTATTTCATAGACTTGTC-AATCACTTGCAAGT-G-GAACTGAAGGTGTGTACAGGTAAGCCAATCAGAACAAGTCATTTGAAGGTTACTCCGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATCCGAGA-------TCACAAGATATAACATCTAC----TACTGACCAAGGTGTCGGCATT-----------ACCATTCAACTGATTCATTTAC--CCTAATCACATGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----TC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-A
gi|95050 : CAGGGTTTTCTCCGGAGTCAC-AATGCATTTCTCGTGTG-ACTTGC-CTTCAAAAAATTTCA--ACGAATTTGCAATATCCCTTAATTTCCCCCTG--ATGTGTCTT-----ACCtcggttatagca
gi|95051 : CAGAGTTCTCCCTAG-GCCATTACCGCATGTCGGTTCCG-ACATGT-CTTCAAA---TCTGAAACTA-ATTTGTGACATCCCATAAATCCTCC--G--ACATGCCTT-----
gi|95052 : AGGGTTTCGTCCTG-GCC-T-AACGCATATTGCATGCATGCAACCTCTTCAAAACGTTTGG--TTT-GTTTGCAATTTCC-----------------ACA--CCTT--------G---A-----GCGACTACCGTAAGATCATCCCA---------
gi|95053 : GCATACTGCATGGG-A--TGC-TTTGAAAATGTTTGG--TTG-ATTTGTGACATTCTTTAAATAATTT--G--ACAT-CCTTAATCTCCCAGAAACAA--GC-ATTACTGGTAGGTAATCCCACATTTGACGTTACTCAAG-TCATTAATAGATGTAAACAAAGAACATGCATGATGTCTCAATTGATAAATAGACCCAATATCACCAAC-TGCCAAATCACACTTCAGTCCTG---TGGA-GTATGT-------AACCAACCAGA
gi|95054 : CATGTCGCATGCG-ATATAC-TTCCACAGGACTTGT--TTG-AATTTCATCATCCTTTAAATGATCC--G--ACA
gi|95055 : TGTTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCTCAATCATGTGAAATCTATGTAGTATGT---ATGCAATTAGTTGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-AGTGT-A---T-AG-TAAGGGCTTTATGCAAGTAAGCAAAACAATG-AAATTGTAAA-GGGTTTTCTC-AGCATCTTAATTCA------ACAAAGCT----A-GAATAAAA-TTCCCACTTAAAATGGTTT--ATTTT
gi|95056 : gacaaTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTC--AATCACATGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAATTAATTAAG-TGTGTCACG----ACCGACCATTTCTCGGAACACGACAACTAGAA--ATAGCTTGC-AGTGT-A---T-AT-TAGGGGCTTAATGCAAGTAAGCAAAACAAAG-AAATCATAAA-GGGTTTTCTC-AGCATCTTATTTCA------GTAAAGCT----A-GAATAAAA-TCCCCACTTAAAATGGTTT--AATTT
gi|95057 : gacaatgTGTTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACTTTTCAATTGATTCATTAACCTCCCAATCACGTGAAATCTATGTTTCATGT---ATGCAATCAAT---------------AAT-------G-TTTGTTACG----AC----CATTTCTCGGATCAAGATAACTGGAA--ATAGATCGC-AGTGT-A---T-AG-TAAGAGCTTTATGCAAGTAAGCAAAACAATG-AAATCATAAAGGGGTTTTCTC-AGCATCTTATTTCA------ACA
gi|95058 : gacaaGATCAAGACAACTAGAA--TGAGATCGT-AGTCT-A---T-TA-TTGGGACATTTTGCAAGCAAACAAAACAATG-AAATCGTAAA-AGATTATATC-AGGGTCTT-TTTTA------ACAAAGCT----A-GAATAAAA-TCACCACTTAAAACGATTT--ATTTT
gi|95059 : tcaggatacaccttccaaagattggcaggactgacactttcctattttCATTTAA------AAG-TATGTCATGGAAGAT----AATCTCTTTTGTC----CAACTAATT--TTA-ATCGT-AGTGTTA---TTAT-TGGGAGCATTTTACAAGTAAACAAAACAATGCAAAT-GTAAA-GGGTTTTCTC-AGTGTCTAATTTCA------ACAAA--T----ATGGATAAAA-TCACCTGCTGAAATGGTTT--ATTTT
gi|95060 : T--A--AAGATTTG-CAGG----AC----TGATTCT----TCAA--CAACTGAAC--TTAGAGTGT-AATGTTA---T-AT-TTTGTTCATTTTGCAAGTAAACAAAACAATG-AAATTGTCAA-GGGTTATATC-AGCATCTTATTTCA------ACAAAGCTAGAGA-GGATAAAA-TCTCCACTTA
gi|95061 : GATCAAGACAACTAGAA--TTAGATCGT-AGTCT-A---T-TA-TTGGGACATTTTGCAAGTAAACAAAACAATG-AAATCGTAAA-AGATTATATC-AGGGTATT-TTTTA------ACAAAGCT----A-GAATAAAA-TCACCACTTAAAACGATTT--ATTTTtataattattta
gi|95062 : AAGGCAATTAGA----TATATGGA-AGTGT-A---T-AAGTTAGGGCATAATGCAAGTAAACAAAACAATG-AAGTCGT
gi|95063 : GACAACTGAAA--TTAGATTGT-AGTGT-AG--T-AT-TTTTGGCATTTTGCAAGTAAACAAAAC-----AAATTGCAAT-GGGTTATATC-AGCATATTATT
gi|95064 : CTGGAATTATA-ATTGT-AGTGT-A---TTAT-TGAGAGCATTTTACAAGTAAACAAATCAGTG-CAATCGTGAA-GGGTTTTCTA-AGCATCTAATTTCA------ACAAATAT----A-GGATAAAA-TCACCACTTGAAATGGTTT--ATTTT
gi|95065 : TAG-TCGT-AGTAT-A---TTAT-CGAGGGCATTTTATAAGTAAACAAAACAATG-CAATCTTAAA-GGGGTTTCTC-AGAATCTTAT-----------------T----A-TTATAAAA-TCACCACTTGAAACGGTTT--ATTTT
gi|95066 : ATTGT-AGTGT-A---TTAT-TGAGAGTATTTTACAAGTAAACAAAACAATG-CAATCGTAAA-GGGTTTTCTC-AGCATCTAATTTCA------ACAAATAT----A-GGATAAAA-TCACCACTTGAAACAGTTT--ATTTT
gi|95067 : ATCGT-AGTGT-A---TTAT-TGAGACCATTTTACAAGTAAACTAATCAATG-CAATCATAAA-GGGTTTTCTG-AGCATCTTATTTCA------ACAAATAT----A-GGATAAAA-TCACCACTTAAAACGGTTT--ATTTT
gi|95068 : ATCAT-AGTAT-A---TTAT-TGAGGGCATTTTGCAAGAGAAAAAAACA-TG-CGATCGTAAA-GGGTTTTCTC-AGCATCTAATTTCA------ACTAAGAT----A-GGATAAAA-TCACCATTTGAAATGGTTT--ATTTT
gi|95069 : ATTGT-AGTGT-A---TTAT-TGAGACCATTTTACAAGTAAACAAATCGATG-CAATAGCAAA-GGGTTTTTTTGAACATCTTATTTCA------ATAAATAT----A-GGATAAAA-TCACCACTTAAAATGTTTT--ATTTT
gi|95070 : TCGC-ACTTT-AACTT-AT-TAAGGGCATTTTGTAAGTAAATAAA----TG-AAATCACAAA-GGGTTATATT-GGCATCTTATTTCATTAATAACAAAGCT----T-GGATAAAA-TCCCAACTTAAATTGGTTT--ATTTT
gi|95071 : TTTACAAGTAAACAAATCGATG-CAATCGTAAA-AGATTTTCTG-A-CATCTAATTGCA------ACAAATAT----A-GGATAAAA-TCACCACTTAAAACGGTTT--ATTTT
gi|95072 : TTTCTC-AGGATCTTATTTCA------ACAAA------------TAAAA-TCCCCACTTAAAACGGTTTAAATTTT
gi|95073 : ggTTTCTC-AGCATCTTATTTCA------ACAA------------ATAAAA-TCCCAACTTAAAATGGTTT--
gi|95074 : ggTTTATC-AGCATCTTATTTCA------ACAA------------ATATAA-TCCCCACTTAAAATGGTTTAAATTTT
blockSeqs : T T T AA A CT . G AATCT GAAA CATTTGACG C G G A TGTC TAAATAGAC A C T A TTGATTTAA AATTGGTTTGC ATA TAATT A GAAG CGAC TT A T ACT T AG A T A C G G TTAATA GC AGAG T A G A AA
blockSeqs : . . . . . . . G . A . C . . A . . . . T T TCGAC . . T . . . . . T G T G A T A . G . . CA . . A . C AA
blockSeqs : . . . . . . . A . C . C . . . . . . . T T TCGAC . . A . . . . . . . T G A T A . . . . GC . . A . C .
blockSeqs : . . . . . . . G . A . C . . . . . . . T A TCGAC . . A . . . . . . . T G A T A . . . . GC . . A . C .
blockSeqs : . . . . . . . A . A . T . . . . . . . C T TCGAC . . A . . . . . . . T G A T A . . . . GC . . A . A .
blockSeqs : . . . . . . . G . C . A . . . . . . . A T TCGCC . . A . . . . . . . T G A T A . . . . GC . . A . C .
blockSeqs : . . . . . . . G . C . . . . . . . . . T A TCTAC . . A . . . . . . . T G A T A . . . . GC . . A . C .
blockSeqs : . . . . . . . G . C . . . . . . . . . . . . . A . . . . . . . . G A T A . . . . GC . . A . A .
blockSeqs : . . . . . . . . . A . . . . A . . . . . . . . T A T A . . . . GC . . G . A .
blockSeqs : . . . . . . . . . . . . A . . . . . . . . G T A T . . . . GC . . G . T .
blockSeqs : . . . . . . . . . . . . . . . . . A G A T . . . . TA . . A . A .
blockSeqs : . . . . . . . . . . . . . . . T T A T . . . . TA . . G . A .
blockSeqs : . . . . . . . . . . T T A T . . . . TA . . T . A .
blockSeqs : . . . . . A T A A . . . . GA . . G . A .
blockSeqs : . . . . . T T A T . . . . TA . . G . A .
blockSeqs : . . . . . T G A T . . . . GC . . G . A .
blockSeqs : . . . . . T G A T . . . . TA . . G . A .
blockSeqs : . . . . T G A T . . . . . . . G . C .
blockSeqs : . . . . T G A T . . . . . . . G . A .
blockSeqs : . . . . T G A T . . . . . . . . . C .
blockSeqs : . . . . T G A T . . . . . . . . . C .
blockSeqs : . . . . T A A T . . . . . . . . . C
blockSeqs : . T . . .
blockSeqs : .
blockSeqCons : **
originalCons : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCTT-----CCCA---ACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAANGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACGTGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AN-TAAGGGCNTTNTGCAAGTAAACAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GGATAAAA-TCNCCACTTAAAACGGTTT--ATTTT
finalCons : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCTT-----CCCA---ACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAANGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACGTGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AN-TAAGGGCNTTNTGCAAGTAAACAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GGATAAAA-TCNCCACTTAAAACGGTTT--ATTTT
Alignments
lowQualScore : 111111111 111111111 11111111111 1
lowQualScore : 3 3 2 33 2 0 33 33 3 88888 7777 0 666666666 2 4 4 8 0 9999 777777777 4 4 1 0 1 0 888888888 0 77777777777 666 0 77777 3 6666 6666 33 1 3 444 2 22 1 1 1 1 3 1 444444 77 3333 1 1 1 1 0 55
lowQualScore : . . . .. . . .. .. . ..... .... . ......... . . . . . .... ......... . . . . . . ......... . ........... ... . ..... . .... .... .. . . ... . .. . . . . . . ...... .. .... . . . . . ..
lowQualScore : 6 1 9 99 9 3 99 99 1 33333 6666 7 000000000 9 4 4 9 9 4444 888888888 4 4 0 1 0 3 999999999 5 33333333333 444 4 11111 1 5555 5555 11 7 5 888 2 77 2 0 0 7 5 6 888888 22 7777 7 3 7 0 6 00
consensus : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCTT-----CCCA---ACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAANGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACGTGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AN-TAAGGGCNTTNTGCAAGTAAACAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GGATAAAA-TCNCCACTTAAAACGGTTT--ATTTT
Reference ( family-610 ) : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCTT-----CCCA---ACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAANGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACGTGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AN-TAAGGGCNTTNTGCAAGTAAACAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GGATAAAA-TCNCCACTTAAAACGGTTT--ATTTT
gi|95042 : CAGGGTTTCCCCCAGAGTCAT-AACACATGTCGCATGCC-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCAACATCCCTTAAGTGGCCC--GTTAAGTGCCTT-----CCGA---ACCGTTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCATGA----TTAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGATGTGTGCAGGTAAGCCAACCAGAACAAGTCATTTGAAGGTTACTCTACCTCAATATAGAAAGCAGTGTCCTGTGAAATTTCTTGATCCAAGATTGTTTTTCACAAGATATAAAATTGAC----TACTGACCAAGGTGTCGGCATT-----------ACCGTTCAATTGTTTCATTAACCTCCCAATCACGTAAAGTCTATGTAGTATGT---ATACAATCAATCTGAACGAAACACTTAAT--A--AAG-TGTGTCACG----GT----CATTTCTCAAATTAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AG-TAAGGGCTTTATGCAAGTAAGCAAAACAATG-AAATCGTAAA-GGGTTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GAATAAAA-TCCCCACTTAAAATGGTTT--ATTTT
gi|95043 : CAGGGTTTCCCCCAGAGTCAT-AACGCATGGCGCATGCA-ACATAC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCTCTTAAGTGGCCC--G--ACATGCCTT-----CCGA---ACCATTGCGACTACCGTTAGATAATCCCA---------TTACACAAGCCCATTAGTA-AT-TAAACAAGTGAC-CCTGTGA----TCAATTGA---------CCTATTTGACAGACTTGTC-AATCACTCGCAAGT-GTGAACTGGAGGTGTGCACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCCGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATGTAAAATCGAC----TACTGACCAAGGTGTCAGCATT-----------ACCTTTCAATTGATTCATTTACCTCCCAATCACTTGAAGTCTATGTAGTATGT---ATGCAATCAGTCGGAACCAAACACTTAAT--T--AAG-TGTGTCACG----GC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-AGTGT-A---G-AG-TAAGGGCTTTATGCAAGTAAACAAAACAATG-AAATCGTAAA-GGATTTTCTC-AGCATCTTATTTCA------ACAAAGCT----A-GAATAAAAGTTATCCCTT-------TTT--ATTTT
gi|95044 : CAGGGTTTCCCCCAGAGTCAC-AACGCATGTTGCATGCG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAATGGACT--G--ACATGCCTT-----CCCA---CCCGTTGCCACTACCGTTAAATTATTCCG---------TTATACAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCCGTGA----TCAGTTGG---------CCTATTTCACAGATTTGTC-ATTCACTCACAAGT-GTGAACTGGAGGTGTGTACAGGTTAGCCAATCAAAACAAGTCATTTGAAGGTTACTCCGCCTCAATAAAGAATGCAGTGTCCTGTGAAATTTCTTGATCCGAGATTG-TTTTCACAAGATTTAAAATCGAC----TACTGACCAAGGTGTTGGCATT-----------ACCTCTCAATTAGTTTATTAACCTCCAAATCACGTAAAGTCTGTGTAATATGTATAATGCAATCAATCGGAACGAAACATTTAAT--A--AAG-TGTGTCACG----AC----CACTTCTCAGATCAAGACAACTAGAA--ATAGACCGC-AGTGC-A---T-AG-TAA-GGCTTTATGCTAGTAAGCAAAACAATG-AAATTGTCAA-GGGTTTTTTC-AGCATCTTATTTCA------ACAAACAT----A-GAATAAAA-TCCCCACTTAAAATGATTT--ATTTT
gi|95045 : CAAGGTTTCCCC-AGAGTCAT-AATGCATGTCGCTTGCG-CCATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATACCTT-----CCCT---ACCCTTGAGACTATTGTTAGATAATCCCA---------TTACACAAGCCCATCAGTA-AT-TTAACAAGTGAC-TCCTTGA----TCAATTCG---------CCTCTTTCACAGACTTGTC-AATCACTCGCAAGT-GTGAGCTGGAGGTGTGTAATTGTAAGCCAAACAGAATGAGTCATTTGAAGGTTACTCCACCTCAATGTAGAATGCGGTGTCCTGTGAAATTTCTTGATCCGAGATTGTTTTTCACAAGATTTAAAATCGAC----TACTGCCCAAGGTGTCGGCATT-----------ACCTTTCAGTTGATTCATTAACCTCCCAATCACGTGAAGACTGTATAGTATGT---ATGCAATCAATCAGAACGAAACACCTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCAC-AGTAT-A---T-AG-TAA-GGCTTTATGTAAGCAAGCAAAACAATG-AAATTGAAAAGGGGTTTTCTC-AGCATCATATTTCA------ACAAAGCT----A-GAATAAAA-TCCCCACTTAAAATGGTTT--ATTTT
gi|95046 : CAGGGTTTCCCCCACAGTCAA-AACGCATGTC--------ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--A
gi|95046 : CC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCCAT-----CCAA---ACCATTGCCCCTACCGTTAGATAATCCCA---------TTACATAAGCCCATCAGTA-AT-TAAACAAGTGAC-CCTGTGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTTGCAAGT-GTGAACTGGAGGTGTGTACAGGTAAGCCAATCAGAACGAGTCATTTGAAGGTTACTCTGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATTCAAGATTGTTTTTCACAAGATATAAAATCGAC----TACTGACTAAGGTGTCGGCATA-----------ACCTTTCAATTGATTCATTTACCTCCCAATCAAGTGAAGTCTATGTAGTATGT---ATGCAATCAATCAGAACGAAACACTTAAT--A--AAG-AGTGTCACA----AC----CATTTTTTAGATCAAGACAACTAGAA--ATAGATCGC-AGTGT-A---T-AG-TAA--GCTTTATGCAAGTAAGCAAAACAAAG-AAACCGTAAA-GAGTTTTCTC-AGCATCTTATTTCA------ATAAAGCT----A-GAATAAAA-TCCCCTCTTAAAATGGTTT--ATTTTnnnnnnnnnncccttcaaaagatttggttgattagcgacatcccttaagtggcccgacatgccatccaaaccattgcccctaccgttagataatcccattacataagcccatcagtaattaaacaagtgaccctgtgatcaattgacctatttcacagacttgtcaatcacttgcaagtgtgaactggaggtgtgtacaggtaagccaatcagaacgagtcatttgaaggttactctgcctcaatatagaaagcggtgtcctgtgaaatttcttgattcaagattgtttttcacaagatataaaatcgactactgactaaggtgtcggcataacctttcaattgattcatttacctcccaatcaagtgaagtctatgtagtatgtatgcaatcaatcagaacgaaacacttaataaagagtgtcacaaccattttttagatcaagacaactagaaatagatcgcagtgtatagtaagctttatgcaagtaagcaaaacaaagaaaccgtaaagagttttctcagcatcttatttcaataaagctagaataaaatcccctcttaaaatggtttatttt
gi|95047 : cagggtttcccccacagtcaaaacgcatgtcacatcccttcaaaagatttggttgattagcgacatcccttaagtggcccgannnnnnnnnnCAGGGTTTCCCCCAGAGTCAT------------CATGCG-ACATCT-CTTCAAAAGATTTGG--TTG-ATTAATGACATCCCTTAAGTGGCCC--G--ACATACCTT-----CCCA---CCCGTTGCGACTACCATTAGATAGTCCCA---------TTACATTAGTCCACCAGTA-AT-TAAACAAG-------------------ACTGA---------CCTATTTCACAGACTTGTC-AATCACTCGCAAGT-GCGAACTGGAT-TGTGTACAGGTGAGCCAATCAGAACAAGTCATTTGAAGGTTACTCTGCCTCAAAATAGAATGCGGTGTCCTGTGAAATTTCTTGACCCGAGATTGTTTT-CACAAGATTTAAAATCGCC----GACTGACCAAGGTGTAGGCATT-----------ACCTTTCAATTGATTCATTAACCTCCCAATCACATCAAGCGTATGTAGTTTGT---ATGCAATCAATCAGAACGAAACACTTAAT--A--AAG-TGTGTCACA----GC----TATTTCTCAGATCAAAACAACTAGGA--ATAGATCGC-AGTGT-A---T-AG-TAAGGGCTTCATGCAAGTAAGCAAAACAATG-AAATCGTAAA-AG
gi|95048 : CAGGGGTTCCCCCAGAGTCAT-AACGCATGTCGCATGTG-ACATCT-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAATTGCCCT--T--A-AT---TG-----ACCA---CCCGGTGCGACTACCGTTTAAAAATCTCA-----------A-----------CAGTA-AG-TAAACACGTGACACGCATGA----TCAATTGA---------CCTATTTCACAGACTTGTC-AATCACTCACAAAT-GAGAATTGGAGTTGTGTACAGATAAGCCAATCAGAATGAGGCATTTGAAGGTTACTCCGCCTCAATATAGAATACGGTGTCCTGTGAAATTTCTTGATACGAGATTGTTTTTCACAAGATTTAAAATTGATTTAATATTGACAAAAGTGTTGGTATTAATTGGTTTGCACCTTTCATTTGATTCATTAACCTCCCAATCAAGTGAAGTCTATGTAGTATGT---ATGTAATCAATCAGAATGAAACACTTAAT--A--AAG-TGTGTCACA----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATCGCAAGT-T-A---T-AG-TAAGGTCTTTATGCAAGAAAGGAAAACAATG-AAATAGTAAA-CAGTTTTCTC-AGCA---TGTTTCA------ACAAAGCT----A-GAATAAAA-TCATCACTTAAAACAGTTA--ATTTT
gi|95049 : CAGGGTTTCCCCCAGAGTCAT-AACGCATGTCGCATGTG-ACATCC-CTTCAAAAGATTTGG--TTG-ATTAGCGACATCCCTTAAGTGGCCC--G--ACATGCATT-----CCCA---CCTGTTGCGACTACCGTTATATAATCCCA---------TAACACAAGACCATCAGTA-AT---------TGAC-CCTGTGA----TCAATTGA---------CCTATTTCATAGACTTGTC-AATCACTTGCAAGT-G-GAACTGAAGGTGTGTACAGGTAAGCCAATCAGAACAAGTCATTTGAAGGTTACTCCGCCTCAATATAGAAAGCGGTGTCCTGTGAAATTTCTTGATCCGAGA-------TCACAAGATATAACATCTAC----TACTGACCAAGGTGTCGGCATT-----------ACCATTCAACTGATTCATTTAC--CCTAATCACATGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----TC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-A
gi|95050 : CAGGGTTTTCTCCGGAGTCAC-AATGCATTTCTCGTGTG-ACTTGC-CTTCAAAAAATTTCA--ACGAATTTGCAATATCCCTTAATTTCCCCCTG--ATGTGTCTT-----ACCtcggttatagca
gi|95051 : CAGAGTTCTCCCTAG-GCCATTACCGCATGTCGGTTCCG-ACATGT-CTTCAAA---TCTGAAACTA-ATTTGTGACATCCCATAAATCCTCC--G--ACATGCCTT-----
gi|95052 : AGGGTTTCGTCCTG-GCC-T-AACGCATATTGCATGCATGCAACCTCTTCAAAACGTTTGG--TTT-GTTTGCAATTTCC-----------------ACA--CCTT--------G---A-----GCGACTACCGTAAGATCATCCCA---------
gi|95053 : GCATACTGCATGGG-A--TGC-TTTGAAAATGTTTGG--TTG-ATTTGTGACATTCTTTAAATAATTT--G--ACAT-CCTTAATCTCCCAGAAACAA--GC-ATTACTGGTAGGTAATCCCACATTTGACGTTACTCAAG-TCATTAATAGATGTAAACAAAGAACATGCATGATGTCTCAATTGATAAATAGACCCAATATCACCAAC-TGCCAAATCACACTTCAGTCCTG---TGGA-GTATGT-------AACCAACCAGA
gi|95054 : CATGTCGCATGCG-ATATAC-TTCCACAGGACTTGT--TTG-AATTTCATCATCCTTTAAATGATCC--G--ACA
gi|95055 : TGTTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTCTCAATCATGTGAAATCTATGTAGTATGT---ATGCAATTAGTTGGAACGAAACACTTAAT--A--AAG-TGTGTCACG----AC----CATTTCTCAGATCAAGACAACTAGAA--ATAGATTGC-AGTGT-A---T-AG-TAAGGGCTTTATGCAAGTAAGCAAAACAATG-AAATTGTAAA-GGGTTTTCTC-AGCATCTTAATTCA------ACAAAGCT----A-GAATAAAA-TTCCCACTTAAAATGGTTT--ATTTT
gi|95056 : gacaaTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACCTTTCAATTGATTCATTAACCTC--AATCACATGAAGTCTATGTAGTATGT---ATGCAATCAATCGGAACGAAACACTTAATTAATTAAG-TGTGTCACG----ACCGACCATTTCTCGGAACACGACAACTAGAA--ATAGCTTGC-AGTGT-A---T-AT-TAGGGGCTTAATGCAAGTAAGCAAAACAAAG-AAATCATAAA-GGGTTTTCTC-AGCATCTTATTTCA------GTAAAGCT----A-GAATAAAA-TCCCCACTTAAAATGGTTT--AATTT
gi|95057 : gacaatgTGTTTTTCACAAGATTTAAAA------------------AGGTGTCGGCATT-----------ACTTTTCAATTGATTCATTAACCTCCCAATCACGTGAAATCTATGTTTCATGT---ATGCAATCAAT---------------AAT-------G-TTTGTTACG----AC----CATTTCTCGGATCAAGATAACTGGAA--ATAGATCGC-AGTGT-A---T-AG-TAAGAGCTTTATGCAAGTAAGCAAAACAATG-AAATCATAAAGGGGTTTTCTC-AGCATCTTATTTCA------ACA
gi|95058 : gacaaGATCAAGACAACTAGAA--TGAGATCGT-AGTCT-A---T-TA-TTGGGACATTTTGCAAGCAAACAAAACAATG-AAATCGTAAA-AGATTATATC-AGGGTCTT-TTTTA------ACAAAGCT----A-GAATAAAA-TCACCACTTAAAACGATTT--ATTTT
gi|95059 : tcaggatacaccttccaaagattggcaggactgacactttcctattttCATTTAA------AAG-TATGTCATGGAAGAT----AATCTCTTTTGTC----CAACTAATT--TTA-ATCGT-AGTGTTA---TTAT-TGGGAGCATTTTACAAGTAAACAAAACAATGCAAAT-GTAAA-GGGTTTTCTC-AGTGTCTAATTTCA------ACAAA--T----ATGGATAAAA-TCACCTGCTGAAATGGTTT--ATTTT
gi|95060 : T--A--AAGATTTG-CAGG----AC----TGATTCT----TCAA--CAACTGAAC--TTAGAGTGT-AATGTTA---T-AT-TTTGTTCATTTTGCAAGTAAACAAAACAATG-AAATTGTCAA-GGGTTATATC-AGCATCTTATTTCA------ACAAAGCTAGAGA-GGATAAAA-TCTCCACTTA
gi|95061 : GATCAAGACAACTAGAA--TTAGATCGT-AGTCT-A---T-TA-TTGGGACATTTTGCAAGTAAACAAAACAATG-AAATCGTAAA-AGATTATATC-AGGGTATT-TTTTA------ACAAAGCT----A-GAATAAAA-TCACCACTTAAAACGATTT--ATTTTtataattattta
gi|95062 : AAGGCAATTAGA----TATATGGA-AGTGT-A---T-AAGTTAGGGCATAATGCAAGTAAACAAAACAATG-AAGTCGT
gi|95063 : GACAACTGAAA--TTAGATTGT-AGTGT-AG--T-AT-TTTTGGCATTTTGCAAGTAAACAAAAC-----AAATTGCAAT-GGGTTATATC-AGCATATTATT
gi|95064 : CTGGAATTATA-ATTGT-AGTGT-A---TTAT-TGAGAGCATTTTACAAGTAAACAAATCAGTG-CAATCGTGAA-GGGTTTTCTA-AGCATCTAATTTCA------ACAAATAT----A-GGATAAAA-TCACCACTTGAAATGGTTT--ATTTT
gi|95065 : TAG-TCGT-AGTAT-A---TTAT-CGAGGGCATTTTATAAGTAAACAAAACAATG-CAATCTTAAA-GGGGTTTCTC-AGAATCTTAT-----------------T----A-TTATAAAA-TCACCACTTGAAACGGTTT--ATTTT
gi|95066 : ATTGT-AGTGT-A---TTAT-TGAGAGTATTTTACAAGTAAACAAAACAATG-CAATCGTAAA-GGGTTTTCTC-AGCATCTAATTTCA------ACAAATAT----A-GGATAAAA-TCACCACTTGAAACAGTTT--ATTTT
gi|95067 : ATCGT-AGTGT-A---TTAT-TGAGACCATTTTACAAGTAAACTAATCAATG-CAATCATAAA-GGGTTTTCTG-AGCATCTTATTTCA------ACAAATAT----A-GGATAAAA-TCACCACTTAAAACGGTTT--ATTTT
gi|95068 : ATCAT-AGTAT-A---TTAT-TGAGGGCATTTTGCAAGAGAAAAAAACA-TG-CGATCGTAAA-GGGTTTTCTC-AGCATCTAATTTCA------ACTAAGAT----A-GGATAAAA-TCACCATTTGAAATGGTTT--ATTTT
gi|95069 : ATTGT-AGTGT-A---TTAT-TGAGACCATTTTACAAGTAAACAAATCGATG-CAATAGCAAA-GGGTTTTTTTGAACATCTTATTTCA------ATAAATAT----A-GGATAAAA-TCACCACTTAAAATGTTTT--ATTTT
gi|95070 : TCGC-ACTTT-AACTT-AT-TAAGGGCATTTTGTAAGTAAATAAA----TG-AAATCACAAA-GGGTTATATT-GGCATCTTATTTCATTAATAACAAAGCT----T-GGATAAAA-TCCCAACTTAAATTGGTTT--ATTTT
gi|95071 : TTTACAAGTAAACAAATCGATG-CAATCGTAAA-AGATTTTCTG-A-CATCTAATTGCA------ACAAATAT----A-GGATAAAA-TCACCACTTAAAACGGTTT--ATTTT
gi|95072 : TTTCTC-AGGATCTTATTTCA------ACAAA------------TAAAA-TCCCCACTTAAAACGGTTTAAATTTT
gi|95073 : ggTTTCTC-AGCATCTTATTTCA------ACAA------------ATAAAA-TCCCAACTTAAAATGGTTT--
gi|95074 : ggTTTATC-AGCATCTTATTTCA------ACAA------------ATATAA-TCCCCACTTAAAATGGTTTAAATTTT