lowQualScore : 11 1 222222222222222222 11 222222 111111
lowQualScore : 6 00 1 55 1 33333 333333 22222 222 22 11 1 1 1 1 1 222222222222222222 33 222 1 444444 2 1 555555 1 1
lowQualScore : . .. . .. . ..... ...... ..... ... .. .. . . . . . .................. .. ... . ...... . . ...... . .
lowQualScore : 5 33 3 88 8 00000 555555 99999 000 77 66 2 2 2 2 2 000000000000000000 22 111 2 888888 5 3 555555 3 4
consensus : TCAGGCCATTACATTAATTT-TTT--ATTTCACTTGT-----CCA------GTC-----GGACAA---GT--A--TTTCT-AAAATC-TGCT-TGTCCT-G-AC----------C-------AAAAAC-AAC---TTGTC-CT-----T-A-CTTTAA-----TCTAGAATTA-TG-GTACTA
Reference ( gi|68709 ) : TCAGACAGTTACATTAATTT-TTT--ATGTCACTTGT-----CCA------GTC-----GGACAA---GT--A--TTTCT-AAAATC-TGCT-TGTCCT-G-AC----------A-------AAAAAA-AAC---TTGTC-C------T-A-CTTTAT-----TCTAGAATTA-TG-GTACTA
gi|68710 : TCAGTCAATTACATTAATTT-TTT--ATATCACTTGT-----CCA------GTC-----CGACAA---GT--A--TTTCT-AAAATC-TGCT-TGTCCT-G-AC----------A-------AAAAAC-AAC---TTGTC-C------T-A-CTTAAT-----TCTAGAATTA-TG-GTACTA
gi|68714 : TCAGGCAATTACATTAATTT-TTT--ATATCATTTGT-----CCA------GTC-----GGACAA---GT--A--TTTCT-AAAGCC-TGCT-TGCCCT-G-AC------------------AAAAAC-AAT---TTGTC-C------T-T-CTTTAT-----TTTAGAATTA-TG-GTACTA
gi|68718 : TCAGGCAATTACATTATTTT-TTTT-ATATCACTTGT-----CCA------GTCCAGTCAGACAA---GT--A--TTTCT-AAAATT-TGCT-TGTCCT-G-AC----------A-------AAAAAC-AAC---GTGTC-C------T-A-CTTTAT-----TCAAGAATTA-TG-ATTCTA
gi|68713 : TCAGGCCATTACATTAATTT-TTT--ATTTCACTTGT-----CCA------GTT-----GGACAA---TT--A--TTTAT-AAAATC-TGCT-GGTCTT-G-AC----------C-------AAAAAC-AAC---TTGTC-CT-----T-A-CTTTTA-----TCTTGAATTA-TG-GTACTA
gi|68716 : TCAGGCCATTACATTAATTT-TTT--ATGTCACTTGT-----CCA------GTT-----GGACAA---GT--G--TTTCT-AAAATC-TACT-TTTCCT-G-TC----------C-------AAAAAC-AAC---TGGTCTT------T-A-C-TTAA-----TCTAAAATTA-TG-GTACTA
gi|68720 : TCAGGCAATTCCATTAACTT-TTT--ATTTCACTTGT-----ACA------GTC-----GGAAAA---GT--A--TTTCT-AAAATC-TGCT-TGTCCT-G-CC----------AAAATAACAAAAAA-AACATTTTGTC-CT-----T-T-CTTTAA-----TCTAGAATTA-TG-GTACT
gi|68712 : TCAGGCCATTACATTAAATT-TTT--ATTTTGCTTGT-----TCA------GTC-----AGACAA---GT--A--TTTTT-AAAATC-TGCT-TGTCCT-G-AC----------C-------ATAAAC-AAC---TTGTC-CT-----T-G-CTTCAA-----TCTAGAATTA-TG-GCACTA
gi|68711 : TCAGGCCATTACATTAAATT-TTT--ATTTTGCTTGT-----TCA------GTC-----AGACAA---GT--A--TTTTT-AAAATC-TGCT-TGTCCT-G-AC----------C-------ATAAAC-AAC---TTGTC-CT-----T-G-CTTCAA-----TCTAGAATTA-TG-GCACTA
gi|68715 : TCAGGCCTTTACATTCATTT-TTTT-ATTTCACT-GT-----CCA------GTT-----GGTCAA---GT--A--TGTCT-AAAATC-TGCT-TGTCCT-G-AC----------C-------AACAAC-AAC---TTGTC-CT-----T-A-CTTTAA-----TCTAGAATTA-TG-GTACTA
gi|68717 : TCAGGCTGTTACATTTATTC-ATT--A---CATTCATAAAATCCA------GTC-----GGACAA---GT--A--TTTGT-AAAATC-TGCT-TGTCCT-G-AC----------C-------AAAAAC-AAC---TTGTC-CT-----T-A-CTTTAA-----TCTAGAATTA-TG-GTACTA
gi|68719 : TCAGGCCATTACGTTTATTC-TTT--ATTTCCATTGC-----CCA------ATC-----AGACAA---GT--A--TTTTG-AAAATC-TGCT-TATCCT-G-AC------------------CAAAAC-AAC---TTGTC-CT-----T-A-C-TTAA-----TCTAGAATTA-TG-GT
gi|68723 : TCGGGCAATTACATTAATTT-TTT--ATATCACTT-------------------------------------------CT-TAAATC-TGCT-TGTTCG-G-AC----------G-------AAAAAC-GAC---TTGTC-C------T-A-CTTAAG-----TCTAGAATTA-TG-GTAC
gi|68724 : TCAGGCAATTACATTAATTTGTTT--ATATCAATTGC-----CCA------GTC-----GGACAA---GA--A--TTTCT-AAAAAC-T-----------------------------------------------TGTC-A------T-A-CTTTAT-----TCAAGAATTA-TG-
gi|68725 : CAGGCAATGACATTAATTT-TTT--ATTTCACTTGT-----CCA------GTT-----GGACAAGACGT--G--TTTCT-AAAATC-TACT-TATCCT-G-AC----------C-------AAAAAC-AAC---CTGTC-CT-----T-A-CTTTAA-----TCTAGAATTA-TG-GTACTA
gi|68728 : CAGGTAATTACATTATTTT-TTTT-ATTTCACTTGT-----CAA------GTT-----TGACAA---GT--A--TTTCT-AAACTC-TGCT-TGTCCT-G-AC----------C-------AAAAAC-AAC---TTGTC-CT-----T-A-CTTTAA-----TCTAGAATTA-TG-GTATTA
gi|68726 : CAGGCTATTACATTAATTT-TTT--ATTTCTATTGT-----CCA------GTT-----GGACAA---GT--A--TTTCT-AAAATC-TACT-TGTCCT-G-AT----------C-------AAAAAC-AAC---TTGTC-CT-----T-A-TTTTTA-----TCTAGAATTA-TG-GCACTA
gi|68729 : CAGGCCGTTACATTAATTA-TT---ATTTCACTTGT-----CCA------GTC-----GGACAA---GT--A--TTTTA-AAAATC-TACT-TGTCCT-T-AC----------C-------AAAAGC-AAC---TTGTC-CT-----T-T-CTTTAA-----TCTAGAATTA-TG-GTACTA
gi|68727 : CAGGCCATTACATTAATTT-TTG--ATTTCACTTGT-----CCA------GTC-----TGACAA---GA--A--TTTCT-AAAATC-TACT-TGTTCT-G-AC----------C-------AAAATC-AAC---TTGTC-CT-----T-A-CTTTAA-----TCTAGAATTA-TA-ATAATA
gi|68730 : CAGGCCATTACTTTAATTT-TTT--ATTTCACTTGC-----TCA------GTC-----GGACAT---GT--A--TTTCT-AAAATCTTGC--TGTCCT-G-AC----------C-------AAAAAC-AAT---CTGTC-CG-----T-A-C-TTAA-----TCTAGAATTA-TG-GTACCA
gi|68731 : CAGGCCATTACATTATTTT-TTT--ATTTCACCTGT-----CCA------GTC-----GGACAA---GA--G--TTTCT-AAAATC-TGCT-TGTCCT-G-AC----------C-------AAAAAC-AAT---TTGTC-C------T-T-TTTTGC-----TC
gi|68732 : CAGGCCATTACATTATTTT-TTT--ATTTCACTTGT-----CCATGGTGAGTA-----GGATAA---GT--A--TTTCT-AATATC-TGCT-TGTCCT-G-AC----------T-------AAAAAC-AAC---TTGAC-CT-----T-A-CATTAA-----TATAGAATTA-
gi|68735 : AGGCAATTACATTAATTT-TTTTAATTTCACTTGT-----CCA------GGC-----GGACAA---GC--A--TTTCT-AAAATC-TGGT-TTTCCT-G-AC----------C-------AAAAAA-------------C------G-A-CTTTAA-----TCTAGAATTA-TG-GTACTA
gi|68738 : TTACATTAATTT-TTC--ATTTCACTTGT-----CCA------GTT-----GGACAA---GT--A--TTTCT-ATAATC-TGCT-TGTCCT-G-AC----------C-------AAAAAT-AAA---TTGTC-CT-----T-A-CTTTAA-----TTTATAATAA-TG-GTACTA
gi|68736 : aTTACATTATTTT-TTT--ATTTTACTTGT-----ACA------GTT-----GGACAA---GT--A--TTTCT-AAAATC-TGCTATA-CCT-G-AC----------C-------AAAAAC-AAC---TTGTC-CA-----T-A-CTTTAA-----TCTAGAATTA-TG-GTACCA
gi|68734 : gccaTTACATTAATTT-TTT--ATTTTACTTTC-----CCT------GTC-----AGACAA---GT--A--TTTCT-AAAATT-TGCT-TGTCCT-G-AC----------C-------AAAAAT-AAC---T------------T-A-CTTTAA-----TCTAGAATTA-TG-GTACTA
gi|68737 : aagccaTTATTTTATTTT-TTT--ATTTTACTTGT-----ACA------ATC-----GGACAA---GT--A--TTTTT-AAA-TC-TGCT-TGTCCT-G-AC----------C-------AAAAAC-AAC---TTTTC-T------TTA-ATTTAA-----TCTAGAATTA-TG-GTACTA
gi|68722 : caTTACATTAATTT-TTT--ATTTTACTTGT-----CTA------GTC-----AGACAA---GT--A--TTTCT-AAAATC-TGCT-T
gi|68721 : tcgggtcaTATATTA-CTT-TAT--ATTTCACTTGT-----CCA------GTT-----TGACAA---GT--T--TTTCT-AAAATC-TGCT-TGTCCT-G-AC----------C-------AAAAAT-AAC---TTGTC-CTTTAAAT-A-CTTCAA-----TCTAGAATTA-TG-GTACTA
gi|68739 : tcaagtaaaTTG-TTT--ATTTCACTTGT-----CCA------GTC-----GGACAA---GT--A--TTTCT-AAAATC-TGCT-TGTCCT-G-AC----------C-------AAAAAC-GAT---CT-CC-T------T-A-C-TTAG-----TTTAGAATTA-TG-GTACT
gi|68733 : TTT-TTT--A-GTCACTTGT-----CCA--------------GGACAA---GTG-A--CTTTTAAAAAGC-CACT-TGTCCT-GAAC----------A-------AAAAGC-ACC---TTGTC-CA-----T-GTTTTTATATACATTTAAAA--A-TGCGTACTA
gi|68716 : cagggctgtacaaatttttCACTTGT-----CCA------ACT-----GGACAA---GT--
gi|68740 : tcaggccattacattaattttttatgtcCATTTGT-----CTA------GTT-----GGACAA---GT--A--TTTTT-GAAATC-TACA-TATCCT-G-GC----------C-------AGAAAGTTAC---TTGTC-C------T-tttctaaaatctacttttcctgtccaaaaacaactggtctttacttaatctaaaattatggtacta
gi|68733 : TTGT-----TCA------G--------GACAA---GT--GGCTTTTT-AAAAGT-CACT-TGTCCTGG-ACAAGTGACTAAA-------AAAAAA-AAT---TTGT
gi|68729 : cagggctgt-----GGACAA---GTAGA--TTTTT-AAAA---TACT-TGTCC--G-AC----------aaagcaccttgtccatgtttttatatacatttaaaaatgcgtacta
gi|68741 : caggccgttacattaattattatttcacttgtccaGACAA---GT--A--TTTCT-AAAATC-TGCT-TGTCCT-G-AC----------C-------AAAAAC-AAC---TTGTC------------CTTTAA-----TCTAGAATTA-TG-GTACTAttaccaaaagcaacttgtcctttctttaatctagaattatggtacta
gi|68742 : AAAAA-AAC---TTGTC-C------TTA-CTTTAA-----TCTAGAATTACCG-GTA
Alignments
lowQualScore : 0 1 1 44 1 2222 222 333333 33333 222 1 1 1 1 3333333 1 1 222 555555 2222 1 1
lowQualScore : . . . .. . .... ... ...... ..... ... . . . . ....... . . ... ...... .... . .
lowQualScore : 6 3 3 44 3 7777 222 666666 11111 111 2 2 2 2 9999999 2 2 111 222222 7777 3 3
consensus : TCAGGCCATTACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
Reference ( family-586 ) : TCAGGCCATTACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68709 : TCAGACAGTTACATTAATTT-T-TT--AT-GT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------AA-AAAA-AAAC---TTGTCC------TACTTTATTCTAGAATT----A-TG-GTACTA
gi|68710 : TCAGTCAATTACATTAATTT-T-TT--AT-AT----CACTTG---TCCA------GTC-----CGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------AA-AAAA-CAAC---TTGTCC------TACTTAATTCTAGAATT----A-TG-GTACTA
gi|68711 : TCAGGCCATTACATTAAATT-T-TT--AT-TT----TGCTTG---TTCA------GTC-----AGACAAG---T-ATTTTTAAAA-TC-TGCTTGT-CCTGAC-------CA-TAAA-CAAC---TTGTCCT-----TGCTTCAATCTAGAATT----A-TG-GCACTA
gi|68712 : TCAGGCCATTACATTAAATT-T-TT--AT-TT----TGCTTG---TTCA------GTC-----AGACAAG---T-ATTTTTAAAA-TC-TGCTTGT-CCTGAC-------CA-TAAA-CAAC---TTGTCCT-----TGCTTCAATCTAGAATT----A-TG-GCACTA
gi|68713 : TCAGGCCATTACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTT-----GGACAAT---T-ATTTATAAAA-TC-TGCTGGT-CTTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTTATCTTGAATT----A-TG-GTACTA
gi|68714 : TCAGGCAATTACATTAATTT-T-TT--AT-AT----CATTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAG-CC-TGCTTGC-CCTGA--------CA-AAAA-CAAT---TTGTCCT-----T-CTTTATTTTAGAATT----A-TG-GTACTA
gi|68715 : TCAGGCCTTTACATTCATTT-T-TTT-AT-TT----CACT-G---TCCA------GTT-----GGTCAAG---T-ATGTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-ACAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68716 : TCAGGCCATTACATTAATTT-T-TT--AT-GT----CACTTG---TCCA------GTT-----GGACAAG---T-GTTTCTAAAA-TC-TACTTTT-CCTGTC-------CA-AAAA-CAAC---TGGTCTT-----TAC-TTAATCTAAAATT----A-TG-GTACTA
gi|68717 : TCAGGCTGTTACATTTATTC-A-TT--ACATT----CA--TAAAATCCA------GTC-----GGACAAG---T-ATTTGTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68718 : TCAGGCAATTACATTATTTT-T-TTT-AT-AT----CACTTG---TCCA------GTCCAGTCAGACAAG---T-ATTTCTAAAA-TT-TGCTTGT-CCTGAC-------AA-AAAA-CAAC---GTGTCC------TACTTTATTCAAGAATT----A-TG-ATTCTA
gi|68719 : TCAGGCCATTACGTTTATTC-T-TT--AT-TT----CCATTG---CCCA------ATC-----AGACAAG---T-ATTTTGAAAA-TC-TGCTTAT-CCTGAC-------C--AAAA-CAAC---TTGTCCT-----TAC-TTAATCTAGAATT----A-TG-GT
gi|68720 : TCAGGCAATTCCATTAACTT-T-TT--AT-TT----CACTTG---TACA------GTC-----GGAAAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGCCAAAATAACA-AAAA-AAACATTTTGTCCT-----TTCTTTAATCTAGAATT----A-TG-GTACT
gi|68721 : TCAAGTAAATATATTA-CTT-T-AT--AT-TT----CACTTG---TCCA------GTT-----TGACAAG---T-TTTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-TAAC---TTGTCCTTTAAATACTTCAATCTAGAATT----A-TG-GTACTA
gi|68722 : TCGGGTCATTACATTAATTT-T-TT--AT-TT----TACTTG---TCTA------GTC-----AGACAAG---T-ATTTCTAAAA-TC-TGCTT
gi|68723 : TCGGGCAATTACATTAATTT-T-TT--AT-AT----CACTT--------------------------------------CTTAAA-TC-TGCTTGT-TCGGAC-------GA-AAAA-CGAC---TTGTCC------TACTTAAGTCTAGAATT----A-TG-GTAC
gi|68724 : TCAGGCAATTACATTAATTTGT-TT--AT-AT----CAATTG---CCCA------GTC-----GGACAAG---A-ATTTCTAAA-----------------------------------AAC---TTGTCA------TACTTTATTCAAGAATT----A-TG-
gi|68725 : CAGGCAATGACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTT-----GGACAAGACGT-GTTTCTAAAA-TC-TACTTAT-CCTGAC-------CA-AAAA-CAAC---CTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68726 : CAGGCTATTACATTAATTT-T-TT--AT-TT----CTATTG---TCCA------GTT-----GGACAAG---T-ATTTCTAAAA-TC-TACTTGT-CCTGAT-------CA-AAAA-CAAC---TTGTCCT-----TATTTTTATCTAGAATT----A-TG-GCACTA
gi|68727 : CAGGCCATTACATTAATTT-T-TG--AT-TT----CACTTG---TCCA------GTC-----TGACAAG---A-ATTTCTAAAA-TC-TACTTGT-TCTGAC-------CA-AAAT-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TA-ATAATA
gi|68728 : CAGGTAATTACATTATTTT-TTTT--AT-TT----CACTTG---TCAA------GTT-----TGACAAG---T-ATTTCTAAAC-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTATTA
gi|68729 : CAGGCCGTTACATTAATTA-T-T---AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTTAAAAA-TC-TACTTGT-CCTTAC-------CA-AAAG-CAAC---TTGTCCT-----TTCTTTAATCTAGAATT----A-TG-GTACTA
gi|68730 : CAGGCCATTACTTTAATTT-T-TT--AT-TT----CACTTG---CTCA------GTC-----GGACATG---T-ATTTCTAAAA-TCTTGC-TGT-CCTGAC-------CA-AAAA-CAAT---CTGTCCG-----TAC-TTAATCTAGAATT----A-TG-GTACCA
gi|68731 : CAGGCCATTACATTATTTT-T-TT--AT-TT----CACCTG---TCCA------GTC-----GGACAAG---A-GTTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAT---TTGTCCT-----T
gi|68732 : CAGGCCATTACATTATTTT-T-TT--AT-TT----CACTTG---TCCATGGTGAGTA-----GGATAAG---T-ATTTCTAATA-TC-TGCTTGT-CCTGAC-------TA-AAAA-CAAC---TTGACCT-----TACATTAATATAGAATT----A-ttttgctc
gi|68733 : CAGGGCTGTACA--AATTT-T-TT--TT-TTTAGTCACTTG---TCCA------G--------GACAAG---TGACTTTTAAAAAGC-CACTTGT-CCTGAA-------CA-AAAAGCACC---TTGTCCA-----TGTTTTTATATACATTTAAAAA-TGCGTACTA
gi|68734 : AAGCCATTACATTAATTT-T-TT--AT-TT----TACTTT---CCCT------GTC-----AGACAAG---T-ATTTCTAAAA-TT-TGCTTGT-CCTGAC-------CA-AAAA-TAA---------CT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68735 : AGGCAATTACATTAATTT-T-TTTAAT-TT----CACTTG---TCCA------GGC-----GGACAAG---C-ATTTCTAAAA-TC-TGGTTTT-CCTGAC-------CA-AAA---AAC-----G----------ACTTTAATCTAGAATT----A-TG-GTACTA
gi|68736 : GCCATTACATTATTTT-T-TT--AT-TT----TACTTG---TACA------GTT-----GGACAAG---T-ATTTCTAAAA-TC-TGC-TATACCTGAC-------CA-AAAA-CAAC---TTGTCCA-----TACTTTAATCTAGAATT----A-TG-GTACCA
gi|68737 : CATTATTTTATTTT-T-TT--AT-TT----TACTTG---TACA------ATC-----GGACAAG---T-ATTTTTAAA--TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTTTCTT-----TAATTTAATCTAGAATT----A-TG-GTACTA
gi|68738 : ATTACATTAATTT-T-TC--AT-TT----CACTTG---TCCA------GTT-----GGACAAG---T-ATTTCTATAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-TAAA---TTGTCCT-----TACTTTAATTTATAATA----A-TG-GTACTA
gi|68739 : TTG-T-TT--AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CGA-----TCTCCT-----TAC-TTAGTTTAGAATT----A-TG-GTACT
gi|68740 : ----CATTTG---TCTA------GTT-----GGACAAG---T-ATTTTTGAAA-TC-TACATAT-CCTGGC-------CAGAAAG-TTAC---TTGTCCT-----
gi|68741 : GACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTC---------CTTTAATCTAGAATT----A-TG-GTACTA
gi|68742 : AC-------CA-AAAA--AAC---TTGTCCT-----TACTTTAATCTAGAATT----ACCG-GTA
Alignments
lowQualScore : 0 1 1 44 1 2222 222 333333 33333 222 1 1 1 1 3333333 1 1 222 555555 2222 1 1
lowQualScore : . . . .. . .... ... ...... ..... ... . . . . ....... . . ... ...... .... . .
lowQualScore : 6 3 3 44 3 7777 222 666666 11111 111 2 2 2 2 9999999 2 2 111 222222 7777 3 3
consensus : TCAGGCCATTACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
Reference ( family-586 ) : TCAGGCCATTACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68709 : TCAGACAGTTACATTAATTT-T-TT--AT-GT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------AA-AAAA-AAAC---TTGTCC------TACTTTATTCTAGAATT----A-TG-GTACTA
gi|68710 : TCAGTCAATTACATTAATTT-T-TT--AT-AT----CACTTG---TCCA------GTC-----CGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------AA-AAAA-CAAC---TTGTCC------TACTTAATTCTAGAATT----A-TG-GTACTA
gi|68711 : TCAGGCCATTACATTAAATT-T-TT--AT-TT----TGCTTG---TTCA------GTC-----AGACAAG---T-ATTTTTAAAA-TC-TGCTTGT-CCTGAC-------CA-TAAA-CAAC---TTGTCCT-----TGCTTCAATCTAGAATT----A-TG-GCACTA
gi|68712 : TCAGGCCATTACATTAAATT-T-TT--AT-TT----TGCTTG---TTCA------GTC-----AGACAAG---T-ATTTTTAAAA-TC-TGCTTGT-CCTGAC-------CA-TAAA-CAAC---TTGTCCT-----TGCTTCAATCTAGAATT----A-TG-GCACTA
gi|68713 : TCAGGCCATTACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTT-----GGACAAT---T-ATTTATAAAA-TC-TGCTGGT-CTTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTTATCTTGAATT----A-TG-GTACTA
gi|68714 : TCAGGCAATTACATTAATTT-T-TT--AT-AT----CATTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAG-CC-TGCTTGC-CCTGA--------CA-AAAA-CAAT---TTGTCCT-----T-CTTTATTTTAGAATT----A-TG-GTACTA
gi|68715 : TCAGGCCTTTACATTCATTT-T-TTT-AT-TT----CACT-G---TCCA------GTT-----GGTCAAG---T-ATGTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-ACAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68716 : TCAGGCCATTACATTAATTT-T-TT--AT-GT----CACTTG---TCCA------GTT-----GGACAAG---T-GTTTCTAAAA-TC-TACTTTT-CCTGTC-------CA-AAAA-CAAC---TGGTCTT-----TAC-TTAATCTAAAATT----A-TG-GTACTA
gi|68717 : TCAGGCTGTTACATTTATTC-A-TT--ACATT----CA--TAAAATCCA------GTC-----GGACAAG---T-ATTTGTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68718 : TCAGGCAATTACATTATTTT-T-TTT-AT-AT----CACTTG---TCCA------GTCCAGTCAGACAAG---T-ATTTCTAAAA-TT-TGCTTGT-CCTGAC-------AA-AAAA-CAAC---GTGTCC------TACTTTATTCAAGAATT----A-TG-ATTCTA
gi|68719 : TCAGGCCATTACGTTTATTC-T-TT--AT-TT----CCATTG---CCCA------ATC-----AGACAAG---T-ATTTTGAAAA-TC-TGCTTAT-CCTGAC-------C--AAAA-CAAC---TTGTCCT-----TAC-TTAATCTAGAATT----A-TG-GT
gi|68720 : TCAGGCAATTCCATTAACTT-T-TT--AT-TT----CACTTG---TACA------GTC-----GGAAAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGCCAAAATAACA-AAAA-AAACATTTTGTCCT-----TTCTTTAATCTAGAATT----A-TG-GTACT
gi|68721 : TCAAGTAAATATATTA-CTT-T-AT--AT-TT----CACTTG---TCCA------GTT-----TGACAAG---T-TTTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-TAAC---TTGTCCTTTAAATACTTCAATCTAGAATT----A-TG-GTACTA
gi|68722 : TCGGGTCATTACATTAATTT-T-TT--AT-TT----TACTTG---TCTA------GTC-----AGACAAG---T-ATTTCTAAAA-TC-TGCTT
gi|68723 : TCGGGCAATTACATTAATTT-T-TT--AT-AT----CACTT--------------------------------------CTTAAA-TC-TGCTTGT-TCGGAC-------GA-AAAA-CGAC---TTGTCC------TACTTAAGTCTAGAATT----A-TG-GTAC
gi|68724 : TCAGGCAATTACATTAATTTGT-TT--AT-AT----CAATTG---CCCA------GTC-----GGACAAG---A-ATTTCTAAA-----------------------------------AAC---TTGTCA------TACTTTATTCAAGAATT----A-TG-
gi|68725 : CAGGCAATGACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTT-----GGACAAGACGT-GTTTCTAAAA-TC-TACTTAT-CCTGAC-------CA-AAAA-CAAC---CTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68726 : CAGGCTATTACATTAATTT-T-TT--AT-TT----CTATTG---TCCA------GTT-----GGACAAG---T-ATTTCTAAAA-TC-TACTTGT-CCTGAT-------CA-AAAA-CAAC---TTGTCCT-----TATTTTTATCTAGAATT----A-TG-GCACTA
gi|68727 : CAGGCCATTACATTAATTT-T-TG--AT-TT----CACTTG---TCCA------GTC-----TGACAAG---A-ATTTCTAAAA-TC-TACTTGT-TCTGAC-------CA-AAAT-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TA-ATAATA
gi|68728 : CAGGTAATTACATTATTTT-TTTT--AT-TT----CACTTG---TCAA------GTT-----TGACAAG---T-ATTTCTAAAC-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTATTA
gi|68729 : CAGGCCGTTACATTAATTA-T-T---AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTTAAAAA-TC-TACTTGT-CCTTAC-------CA-AAAG-CAAC---TTGTCCT-----TTCTTTAATCTAGAATT----A-TG-GTACTA
gi|68730 : CAGGCCATTACTTTAATTT-T-TT--AT-TT----CACTTG---CTCA------GTC-----GGACATG---T-ATTTCTAAAA-TCTTGC-TGT-CCTGAC-------CA-AAAA-CAAT---CTGTCCG-----TAC-TTAATCTAGAATT----A-TG-GTACCA
gi|68731 : CAGGCCATTACATTATTTT-T-TT--AT-TT----CACCTG---TCCA------GTC-----GGACAAG---A-GTTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAT---TTGTCCT-----T
gi|68732 : CAGGCCATTACATTATTTT-T-TT--AT-TT----CACTTG---TCCATGGTGAGTA-----GGATAAG---T-ATTTCTAATA-TC-TGCTTGT-CCTGAC-------TA-AAAA-CAAC---TTGACCT-----TACATTAATATAGAATT----A-ttttgctc
gi|68733 : CAGGGCTGTACA--AATTT-T-TT--TT-TTTAGTCACTTG---TCCA------G--------GACAAG---TGACTTTTAAAAAGC-CACTTGT-CCTGAA-------CA-AAAAGCACC---TTGTCCA-----TGTTTTTATATACATTTAAAAA-TGCGTACTA
gi|68734 : AAGCCATTACATTAATTT-T-TT--AT-TT----TACTTT---CCCT------GTC-----AGACAAG---T-ATTTCTAAAA-TT-TGCTTGT-CCTGAC-------CA-AAAA-TAA---------CT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68735 : AGGCAATTACATTAATTT-T-TTTAAT-TT----CACTTG---TCCA------GGC-----GGACAAG---C-ATTTCTAAAA-TC-TGGTTTT-CCTGAC-------CA-AAA---AAC-----G----------ACTTTAATCTAGAATT----A-TG-GTACTA
gi|68736 : GCCATTACATTATTTT-T-TT--AT-TT----TACTTG---TACA------GTT-----GGACAAG---T-ATTTCTAAAA-TC-TGC-TATACCTGAC-------CA-AAAA-CAAC---TTGTCCA-----TACTTTAATCTAGAATT----A-TG-GTACCA
gi|68737 : CATTATTTTATTTT-T-TT--AT-TT----TACTTG---TACA------ATC-----GGACAAG---T-ATTTTTAAA--TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTTTCTT-----TAATTTAATCTAGAATT----A-TG-GTACTA
gi|68738 : ATTACATTAATTT-T-TC--AT-TT----CACTTG---TCCA------GTT-----GGACAAG---T-ATTTCTATAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-TAAA---TTGTCCT-----TACTTTAATTTATAATA----A-TG-GTACTA
gi|68739 : TTG-T-TT--AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CGA-----TCTCCT-----TAC-TTAGTTTAGAATT----A-TG-GTACT
gi|68740 : ----CATTTG---TCTA------GTT-----GGACAAG---T-ATTTTTGAAA-TC-TACATAT-CCTGGC-------CAGAAAG-TTAC---TTGTCCT-----
gi|68741 : GACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTC---------CTTTAATCTAGAATT----A-TG-GTACTA
gi|68742 : AC-------CA-AAAA--AAC---TTGTCCT-----TACTTTAATCTAGAATT----ACCG-GTA
blockSeqs : G T TA A TAGT AAA TGGTGA CAGTC ACG G A T A AAAATAA G G ATT TTTAAA AAAA C C
blockSeqs : . . T . . . . . . . . . . . . . . T . . .
blockSeqs : . . T . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
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blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . G . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . A . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . A . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . .
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blockSeqs : . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . .
blockSeqCons : T*****
originalCons : TCAGGCCATTACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
finalCons : TCAGGCCATTACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
Alignments
lowQualScore : 0 1 1 44 1 2222 222 333333 33333 222 1 1 1 1 3333333 1 1 222 555555 2222 1 1
lowQualScore : . . . .. . .... ... ...... ..... ... . . . . ....... . . ... ...... .... . .
lowQualScore : 6 3 3 44 3 7777 222 666666 11111 111 2 2 2 2 9999999 2 2 111 222222 7777 3 3
consensus : TCAGGCCATTACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
Reference ( family-586 ) : TCAGGCCATTACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68709 : TCAGACAGTTACATTAATTT-T-TT--AT-GT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------AA-AAAA-AAAC---TTGTCC------TACTTTATTCTAGAATT----A-TG-GTACTA
gi|68710 : TCAGTCAATTACATTAATTT-T-TT--AT-AT----CACTTG---TCCA------GTC-----CGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------AA-AAAA-CAAC---TTGTCC------TACTTAATTCTAGAATT----A-TG-GTACTA
gi|68711 : TCAGGCCATTACATTAAATT-T-TT--AT-TT----TGCTTG---TTCA------GTC-----AGACAAG---T-ATTTTTAAAA-TC-TGCTTGT-CCTGAC-------CA-TAAA-CAAC---TTGTCCT-----TGCTTCAATCTAGAATT----A-TG-GCACTA
gi|68712 : TCAGGCCATTACATTAAATT-T-TT--AT-TT----TGCTTG---TTCA------GTC-----AGACAAG---T-ATTTTTAAAA-TC-TGCTTGT-CCTGAC-------CA-TAAA-CAAC---TTGTCCT-----TGCTTCAATCTAGAATT----A-TG-GCACTA
gi|68713 : TCAGGCCATTACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTT-----GGACAAT---T-ATTTATAAAA-TC-TGCTGGT-CTTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTTATCTTGAATT----A-TG-GTACTA
gi|68714 : TCAGGCAATTACATTAATTT-T-TT--AT-AT----CATTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAG-CC-TGCTTGC-CCTGA--------CA-AAAA-CAAT---TTGTCCT-----T-CTTTATTTTAGAATT----A-TG-GTACTA
gi|68715 : TCAGGCCTTTACATTCATTT-T-TTT-AT-TT----CACT-G---TCCA------GTT-----GGTCAAG---T-ATGTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-ACAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68716 : TCAGGCCATTACATTAATTT-T-TT--AT-GT----CACTTG---TCCA------GTT-----GGACAAG---T-GTTTCTAAAA-TC-TACTTTT-CCTGTC-------CA-AAAA-CAAC---TGGTCTT-----TAC-TTAATCTAAAATT----A-TG-GTACTA
gi|68717 : TCAGGCTGTTACATTTATTC-A-TT--ACATT----CA--TAAAATCCA------GTC-----GGACAAG---T-ATTTGTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68718 : TCAGGCAATTACATTATTTT-T-TTT-AT-AT----CACTTG---TCCA------GTCCAGTCAGACAAG---T-ATTTCTAAAA-TT-TGCTTGT-CCTGAC-------AA-AAAA-CAAC---GTGTCC------TACTTTATTCAAGAATT----A-TG-ATTCTA
gi|68719 : TCAGGCCATTACGTTTATTC-T-TT--AT-TT----CCATTG---CCCA------ATC-----AGACAAG---T-ATTTTGAAAA-TC-TGCTTAT-CCTGAC-------C--AAAA-CAAC---TTGTCCT-----TAC-TTAATCTAGAATT----A-TG-GT
gi|68720 : TCAGGCAATTCCATTAACTT-T-TT--AT-TT----CACTTG---TACA------GTC-----GGAAAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGCCAAAATAACA-AAAA-AAACATTTTGTCCT-----TTCTTTAATCTAGAATT----A-TG-GTACT
gi|68721 : TCAAGTAAATATATTA-CTT-T-AT--AT-TT----CACTTG---TCCA------GTT-----TGACAAG---T-TTTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-TAAC---TTGTCCTTTAAATACTTCAATCTAGAATT----A-TG-GTACTA
gi|68722 : TCGGGTCATTACATTAATTT-T-TT--AT-TT----TACTTG---TCTA------GTC-----AGACAAG---T-ATTTCTAAAA-TC-TGCTT
gi|68723 : TCGGGCAATTACATTAATTT-T-TT--AT-AT----CACTT--------------------------------------CTTAAA-TC-TGCTTGT-TCGGAC-------GA-AAAA-CGAC---TTGTCC------TACTTAAGTCTAGAATT----A-TG-GTAC
gi|68724 : TCAGGCAATTACATTAATTTGT-TT--AT-AT----CAATTG---CCCA------GTC-----GGACAAG---A-ATTTCTAAA-----------------------------------AAC---TTGTCA------TACTTTATTCAAGAATT----A-TG-
gi|68725 : CAGGCAATGACATTAATTT-T-TT--AT-TT----CACTTG---TCCA------GTT-----GGACAAGACGT-GTTTCTAAAA-TC-TACTTAT-CCTGAC-------CA-AAAA-CAAC---CTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68726 : CAGGCTATTACATTAATTT-T-TT--AT-TT----CTATTG---TCCA------GTT-----GGACAAG---T-ATTTCTAAAA-TC-TACTTGT-CCTGAT-------CA-AAAA-CAAC---TTGTCCT-----TATTTTTATCTAGAATT----A-TG-GCACTA
gi|68727 : CAGGCCATTACATTAATTT-T-TG--AT-TT----CACTTG---TCCA------GTC-----TGACAAG---A-ATTTCTAAAA-TC-TACTTGT-TCTGAC-------CA-AAAT-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TA-ATAATA
gi|68728 : CAGGTAATTACATTATTTT-TTTT--AT-TT----CACTTG---TCAA------GTT-----TGACAAG---T-ATTTCTAAAC-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTCCT-----TACTTTAATCTAGAATT----A-TG-GTATTA
gi|68729 : CAGGCCGTTACATTAATTA-T-T---AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTTAAAAA-TC-TACTTGT-CCTTAC-------CA-AAAG-CAAC---TTGTCCT-----TTCTTTAATCTAGAATT----A-TG-GTACTA
gi|68730 : CAGGCCATTACTTTAATTT-T-TT--AT-TT----CACTTG---CTCA------GTC-----GGACATG---T-ATTTCTAAAA-TCTTGC-TGT-CCTGAC-------CA-AAAA-CAAT---CTGTCCG-----TAC-TTAATCTAGAATT----A-TG-GTACCA
gi|68731 : CAGGCCATTACATTATTTT-T-TT--AT-TT----CACCTG---TCCA------GTC-----GGACAAG---A-GTTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAT---TTGTCCT-----T
gi|68732 : CAGGCCATTACATTATTTT-T-TT--AT-TT----CACTTG---TCCATGGTGAGTA-----GGATAAG---T-ATTTCTAATA-TC-TGCTTGT-CCTGAC-------TA-AAAA-CAAC---TTGACCT-----TACATTAATATAGAATT----A-ttttgctc
gi|68733 : CAGGGCTGTACA--AATTT-T-TT--TT-TTTAGTCACTTG---TCCA------G--------GACAAG---TGACTTTTAAAAAGC-CACTTGT-CCTGAA-------CA-AAAAGCACC---TTGTCCA-----TGTTTTTATATACATTTAAAAA-TGCGTACTA
gi|68734 : AAGCCATTACATTAATTT-T-TT--AT-TT----TACTTT---CCCT------GTC-----AGACAAG---T-ATTTCTAAAA-TT-TGCTTGT-CCTGAC-------CA-AAAA-TAA---------CT-----TACTTTAATCTAGAATT----A-TG-GTACTA
gi|68735 : AGGCAATTACATTAATTT-T-TTTAAT-TT----CACTTG---TCCA------GGC-----GGACAAG---C-ATTTCTAAAA-TC-TGGTTTT-CCTGAC-------CA-AAA---AAC-----G----------ACTTTAATCTAGAATT----A-TG-GTACTA
gi|68736 : GCCATTACATTATTTT-T-TT--AT-TT----TACTTG---TACA------GTT-----GGACAAG---T-ATTTCTAAAA-TC-TGC-TATACCTGAC-------CA-AAAA-CAAC---TTGTCCA-----TACTTTAATCTAGAATT----A-TG-GTACCA
gi|68737 : CATTATTTTATTTT-T-TT--AT-TT----TACTTG---TACA------ATC-----GGACAAG---T-ATTTTTAAA--TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTTTCTT-----TAATTTAATCTAGAATT----A-TG-GTACTA
gi|68738 : ATTACATTAATTT-T-TC--AT-TT----CACTTG---TCCA------GTT-----GGACAAG---T-ATTTCTATAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-TAAA---TTGTCCT-----TACTTTAATTTATAATA----A-TG-GTACTA
gi|68739 : TTG-T-TT--AT-TT----CACTTG---TCCA------GTC-----GGACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CGA-----TCTCCT-----TAC-TTAGTTTAGAATT----A-TG-GTACT
gi|68740 : ----CATTTG---TCTA------GTT-----GGACAAG---T-ATTTTTGAAA-TC-TACATAT-CCTGGC-------CAGAAAG-TTAC---TTGTCCT-----
gi|68741 : GACAAG---T-ATTTCTAAAA-TC-TGCTTGT-CCTGAC-------CA-AAAA-CAAC---TTGTC---------CTTTAATCTAGAATT----A-TG-GTACTA
gi|68742 : AC-------CA-AAAA--AAC---TTGTCCT-----TACTTTAATCTAGAATT----ACCG-GTA