lowQualScore : 11111 11111111 111111111 7777777777 11 1111111 11111111 1111 1111111111111 1111111111111 111 11111111
lowQualScore : 55 55 9 4 0 9999 5555 33 5 66 88888 44 1 22222222 333333333 666 4444444444 3 3 3 555 44 3 0 33 3 2 888 11 1 4 33 2 4444444 2 4 33333333 4 33 4 0000 333 55555 7777777777777 1 66 44 1 55 1 44444 333 7777777777777 666666 6666 1 444 333 1 0 666 1 1 1 444 444 22 777 1 77777 333 4444 2 0 777777 444 5555 33 33 555 55 2 3 0 77777 3 1 0 00000000 55555 3 3 555 0
lowQualScore : .. .. . . . .... .... .. . .. ..... .. . ........ ......... ... .......... . . . ... .. . . .. . . ... .. . . .. . ....... . . ........ . .. . .... ... ..... ............. . .. .. . .. . ..... ... ............. ...... .... . ... ... . . ... . . . ... ... .. ... . ..... ... .... . . ...... ... .... .. .. ... .. . . . ..... . . . ........ ..... . . ... .
lowQualScore : 66 66 4 7 7 4444 0000 44 0 99 55555 66 8 11111111 333333333 444 1111111111 6 6 6 888 66 8 4 44 5 5 888 99 1 7 11 2 4444444 2 4 00000000 4 11 6 3333 777 66666 6666666666666 7 99 00 7 66 7 33333 222 7777777777777 555555 4444 4 555 222 8 2 111 8 7 7 888 888 44 000 9 77777 555 2222 7 3 777777 000 1111 77 77 111 11 9 4 1 77777 1 7 2 66666666 22222 3 3 888 5
consensus : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAGTGT--CAAAATATGAAA--------TGAAATAT---------GGCATACAAT---TTATGTGGAAATATTTTACAA-----CTTTTCTATTATA-ATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTAAGTTTGAAGGTGTCATTTAGTTGTAGTAGCCGATAAAA--ATCTTCTAAG-TTAT---TTTCA-CCGGA-ATACC--AA-GA-------C-TG-TAAAC-------AT-TG--TAGTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--NATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--G-TAA--AAAGGGAATTTCAA--TACA--AAGATA-CTTTTCTGGATT-TAATAAGGTTTTGAAATAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
Reference ( gi|62299 ) : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAGTGT--CAAAATATGAAA--------TGAAATAT---------GGCATACAAT---TTATGTGGAAATATTT----------CTTTTCTATTATA-ATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTAAGTTTGAAGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-TTAT---TTTCC-CCGGA-ATACC--AA-GA-------C-TG-TAAAC-------AT-TG--TAGTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--G-TAA--AAAGGGAATTTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62298 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAGTGT--CAAAATATGAAA--------TGAAATAT---------GGCATACAAT---TTATGTGGAAATATTT----------CTTTTCTATTATA-ATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTAAGTTTGAAGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-TTAT---TTTCC-CCGGA-ATACC--AA-GA-------C-TG-TAAAC-------AT-TG--TAGTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--G-TAA--AAAGGGAATTTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGATAAAATAAACATATTA
gi|62301 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAGTGT--CAAAATATGAAA--------TGAAATAT---------GGCATACAAT---TTATGTGGAAATATTT----------CTTTTCTATTATA-AATGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTAAGTTTGAAGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-TTAT---TTTCC-CCGGA-ATACC--AA-GA-------C-TG-TAAAC-------AT-TG--TAGTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--G-TAA--AAAGGGAATTTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62300 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAGTGT--CAAAATATGAAA--------TGAAATAT---------GGCATACAAT---TTAAGTGGAAATATTT----------CTTTTCTATTATA-ATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTAAGTTTGAAGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-TTAT---TTTCC-CCGGA-ATACC--AA-GA-------C-TG-TAAAC-------AT-TG--TAGTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--G-TAA--AAAGGGAATTTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62295 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAGTGT--CAAAATATGAAA--------TGAAATAT---------GGCATACAAT---TTATGTGGAAATATTTTACAATATT-CTTTTCTATTATA-ATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTAAGTTTGAAGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-TTAT---TTTCA-CCGGA-ATACC--AA-GA-------C-TG-TAAAC-------AT-TG--TAGTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTT--GTGACGACCAGTTTC--TCTTTTGAGCTTGT-----GACTAGATCAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--G-TAA--AAAGGGAATTTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACATGTGGAT----T--CTG-CA--ATACTACCATTACC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62297 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAGTGT--CAAAATATGAAA--------TGAAATAT---------GGCATACAAT---TTATGTGGAAATATTTTACAATATT-CTTTTCTATTATA-A----GATTCA-TTTCGT-ACCAAAATAAAATGGATGTA---TGCA--GCTAGTTTCCTAAGTTTGAAGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-TTAT---TTTCA-CCGGA-ATACC--AA-GA-------C-TG-TAAAC-------AT-TG--TAGTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGTA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGATGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--A-TAA--AAAGGGAATTTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAATCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62302 : AATACAAA-T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAGTGT--CAAAATATGAAA--------TTAAATAT---------GGCATACAAT---TTATGTGGAAATATTTTACAATATT-CTTTTTCATTATA-ATTGTGATTCA-TTTTGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTAAGTTTGAAGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-TTAT---TTTCA-CCGGA-ATACC--AA-GA-------C-TG-TAAAC-------AT-TG--TAGTCTC----AGA---TCCGC----ATATCT----C--------GGATAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--ATGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--G-TAA--AAAGGGAATTTCAA--TACA--AAGATA--TTTAAT--ATT-TAATAAAGTTTTGAAATAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCATTCTGATAGGCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62303 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAGTGT--CAAACTATGAAA--------TGAAATAT---------GGCATACAAT---GTATGTGGTAATATTTTACAATACT-CTTTTTTATTATA-ATTGTGATTCA-TTTCGT-ACCAAAATAAAGTGGATATA---TGCA--GCTAGTTTCCTAAGTTTGAAGATGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-TTAT---TTTCG-CCGGA-ATACC--AA-GA-------C-TG-TAAAT-------AT-TG--TAGTCTC----AGA---TCCGT----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTG-----TAA---CGCTTATACTTGCA-T-----G-AATAT----G-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGGCGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAA-GGGAA-AGAGATT------TTTT---AT--G-TAA--AAAGGGAATTTCAA--TACA--AAGATATTTTTTCTGGATT-TAATAATGTTTTGAAATAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATACAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATT
gi|62304 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----
gi|62296 : AATACAA--T--ATATA-ATGTTTTATTTCCTAAACAAAGGCCTCCTGTCCAAAATACA----T
gi|62305 : ATAAAA--T--ACATG-ATGTTTTATTTTGTAAACAAAGGCCTCCGACCCAAAATACA----TA----TCATTA--TTTA-CA--GCAATTT------GTA-TG------AGGATCACA--------TG---CAT---------GTTAT---AT---T--TGTAG------TT----------CTTTTTTAACAGACAT--TGATTC--------------AATAA----GATAT---------------TTTTCTTATTCTATAAATGGCGTCCAGTTGTAGAATTTTGTAAAC--ATGTAATAGG-TCAG---TTTCA-CCAGA-GTGTC--AA-GA-------A-AA-TAGAA-------GA-TG--ACGTC-------AA---TCTG-----ATATCT----G--------GGACA
gi|62306 : ATACAG--T--GTACA-ATGTTTTATTTCGCAAACAAAGGCCTCCAGCCTAAAATATA----TA----TCATTA--TTTA-CA--
gi|62307 : ACACAA--T--ATAGA-ATTATTTATTT-GTAAACAAAGGCCCCCGGCCCAAA-TACA----TA----TCATTA--TTTA-CA--
gi|62308 : ATACAA--TTTACA-C--TGTTTTATTTCGTAAAAAAAGGTCTCCGACCCAAAATACA----TAATGTTCATTA--TTTA-CA--GCAATTT-----Agcaaattgtatgagttacacatgttaatatgtgttattctatattttttgcatacaataaattgttcttattttataagtgtcttcctgttgaagaatgttgtaataaaatgaaagataggtttaaccagaataccaagaaaatagaaggaaatgacgttaatctgagtatctaggacattaaagaagacatgatattcatcttcta
gi|62309 : ATACAAGAT--GCA-AGATGTTTTATTGAGTAAATGAAGGCCTCCGGCCCAAAATACAACACTA------ATTG--TTGATCATCGATGTTTTTCAAAGTTGTGTTACAATATATTAAATATACATTTGAAGTGTCTGAAAACCGG--TACAGTATATAATGTGGAACTATGT----------TTTATCT-T--TA-ATTTTTAAACAGTTTTGT---TAAAAAAAGAGCAATGTT---TTTA--A-TAGTCT-CTGGATTC-------TCGCT---TTGAAGGAATCGATAAAA--ATC-TGTATG-TTCTGAATGTCC-T---ATATACC--A---A-------T-TA-TACAG-------ATGTG--TA-TCTCCA--ACA---TGAGT----ATA-CT----T--------AGA-AC-AATTAG--AA-AAT-AC--TAGTATTCGTTTTCTA-----TCA---CCATTATATT-----T-----G-AATTTAAGAA-A----CAAAATAAAC---AT-ATTCTATTTTCAG-TTTC-AA-T---GTT---AAA--ATGTTGACCAATTCC--AATATTTAGTCTGTGAGAGGAGTACAGCATTTACGA----AAAC
gi|62310 : TATAA--T--ACA-A-ATTCTTTATTTCGTGAATAGAGGCCTACGGCCCAAAGTACA----TA----CCATTA--TTTA-CA--AGCATTT-----GGTAGTGT--CAAAATATAAAA--------TGATATAT---------GGCAAACAAT---TTATGTGGAAATATTTTATAAATAATCTTTT-TATTATA-ATTGTGATTCA-TTTCGT-ACCAAAATAAAGTGGACATA---TGCA--GCTAGTTTCCTAAGTGTGAAGGTATCATTTAGTTGTAGTAGCTGATAAAA--CTCTTCTAAG-TTAT---TTTCA-CAAGA-ATACT--AT-GA-------T-TG-TAAAC-------AT-CG--TAGTCTC----TGA---TCCGC----ATATCT----C--------AGACAC-AG--AA--AG-AAT-ACA-TGATATTCGTCTTTTA-----GAA---TGGTTATATTTGCA-T-----G-AATAT----A-A----CAATATGTGC---AC-TTTCGGTCTTGCC-TTTT-AA-T---ATT---TTC--GTGGCGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---AGA----AAACGGG
gi|62311 : TACAA--TT-ACA-A-ACCTTTTATTTCATAAACAGAGGCATCTGGCCCAAAATACA----TA----TGTTTAGTTTTA-CA--AACATTTA----AGT--TGT--CA--------------------AAGTAT---------GGCATAAAAT---TTATGTGGAAATGTTT----------
gi|62312 : A--T--ACA-AGATGTTTTATTGAGTAAATAAAGGCCTCCGGCCCAAAATACAACAGTA------ATTA--TTGATCATTGATGTTTTACAAAGTTGTGT--TACAATAT---A--------TTAAATAT---------ta
gi|62313 : TTTCGTAAACAAATGCCTCTAGACAATAATACA----TA----TCATTA--TTTA-CA--acatttgaagtgtctgaaaactggtacagtat
gi|62314 : TATA-ACTGATATTCA-TTTTGTTATTAGA-TAAA--GGTTACA---TACACGGCTAATTT-------TTGA---------TTAGTTGTAACAGATGATAACA--ATCTACTTGG-TTAT---TTTCA-TTCAA-ATACCTGAA-GA-------CATG----AC-------AA-TGACT-GTCTT----AAA---TCTGC----ACATTT----T--------TGACAC-AA--AA--A
gi|62316 : AATGGAGATAAGTTGCT--ACCAGTTT--TA----TCAAACTGTCATTT---TGTGAT-GCC-ATTAAA--ATTGT-TAAC-TTAT---GGTCAGTTGGA-TTATT--AA-AATATTTATC-TGGCAAAT-------AT-GC--T--TCTCCCTTAAA---TCTGT----ATATATATATT--------GCA-AC-AG--TA--AA-AA----G-TGAAACTTATCTTCTA-----CAA---CATTTACA-TCACA-C-------AATGT------A----C-ATA--------AC-CTTCGATCT---C-TTTC-TA-T---ATT---TAT--GTAACGACCCCTTTC--AATTTCCAGGTCAT-----G---AGAAC-T---CGA----
gi|62317 : TGTCATTT---TGT-GTTGCCATTAAAA-----TGATAAACTTAT---GTTCAGTTGGA-TTATC--AA-AATATTTATC-TGGCAAAT-------AT-GA--TTCTCTT----AAA---TCTGT----ATATATATTAC--------A-ACAC-AG--TA--AA-AAT-----TGAAACTCATCTTCTA-----CAA---CATTTACA-TCAC---------------------A----CA--ATGTACATTAC-CTTCGATCT---C-TTTC-TA-T---ATT---TCT--GTAACGACC-CTTTC--AATTTCCAGGTCAT-----G---AGAAC-T---CGATCTGAAGCTTGCATAGATATGACGAAATTTT---CT--GATA------------TTTAG--TACATGGAGATA-CTTTTC
gi|62318 : GTTGAAGCAATCGATAAAA--ATCTG-TATG-TTCTGAATGTCC-T---ATATACC--AA----------T-TA-TACAG-------ATGTG--T-TTCTCTA--ACA---TGGGT----ATA-CT----T--------AGA-AC-AATTAA--AA-AAT-ACA-TGGTATTCGTTTTCTA-----TCA---CCATTATATTGGAA-T-----TTAAGA-----A-A----CAAAATAAAC---AT-ATTCTATTTTCTC-TTTC-AA-T---TTT---AAA--ATGTCGACCAATTTC--AATATTTAGTCGAT-----GAGAGGAGCAT---CTA----AAACGTGCA-AATGATC------GTTTGAGAT--T-GAACGAAAGG-----TCAA--TGTT--TAAATA-TCTTTCAGGATT-TAATAAGGATTTAATATGT-----TTATA-TGTACCTGGGTGAGTTGAT----T----------ATATCATCA-TGCC-AAG---ATTGAGTCATACAATCTGAGATTAAACGTTTAAATATTAA
gi|62319 : TAAAACAATCTTTTACG-TTAT---TTTCA-CTGAA-ATATC--AA-GA-------C-TG-TAAAA-------AT-CG--ACGTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AA--AAGGAA-AA--ACA-TGATATACATTTTCTA-----GAA---TGTTTATATTTGCA-T-----T-AATAT----A-A----CAATAAGTAA---AC-TTTCGGTCTTCCC-TTTC-AA-T---ATA---TTC--GTGGTGACTAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAC---GGA----AAACAGGCA-AGAGA-T------TTTT---AT--G-CAA--ATAGAGAATTTCAA--TACA--AAGGTA-TTTTTCTGGATTGTA-TAAGGTTTTGTTATAC-----TTTTA-AGTGTCCAAACATGCAGAT--------TA-CAAGATACTACCA-TGCC-AGTATAACTTGGGCATGCAAACTGATAGTCGTTG---AAATGCTAAAATAAACATA
gi|62320 : --ATCTAATAAA-TAAG---TTTCA-CCATA-GCACC--AA-GA-------C-TG-TAGAAGGATTTGAC-TG--TAGTCTG----AG--------------TATCA----A--------GGACAT-AT--AC--TC-AAT-ACA-TGACATTCATTTTCTAATACATGAGAGTGTTCA-ATTAGTAAT-----C-AATA-----A-AGG--CAAGA---AC---AC-TTTT-------CC-GATG-AA-A---ATT---TTA--ATGACGACCGGTTTC--TATTTTCAACGTGTTAA--GACCGGAATAT---CGA----TAACGAGCC-ATTGA-T------TTGT---AT--G-TAC--AAA
gi|62307 : -CCAGA-ATACC--AA-GA-------A-AA-TAGAAGGA----AA-TG--ACGTT-------AA---TCTGA----GTATCT----A--------GGACAT--T--AA--AG-AAG-ACA-TGATATTCATCTTCTA-----
gi|62321 : acacaatatagaattatttatttgtaaacaaaggcccccggcccaaatacatatcattatttacagcaaattgtatgagttacacatgttaatatgtgttattctatattttttgcatacaataaattgttcttattttataagtgtcttcctgttgaagaatgttgtaataaaatgaaagataggtttaaCC--AATGG-------C-AG-TAAAT-------AT-T---TAGG-------AGACAATCCGTTGTAATATCT----CTATAGAAAGGACAA-AC--AA--TA-ACA-AAA-TGATATTCGTCTTCCA-----C---------TACATTC-------------ATCT----G-A----CAATATATAC---AT-TTTCTATCTGATC-TATC-TA-T---ATT---TCT--ATAACGACCCTCTTC--AATGGCAAGTTTGT-----GAGCGGAACAA---CGT----AA
gi|62315 : TCTT----AAA---TCTGT----ATATATATTAC--------A-ACAC-AG--TA--AA-AA----G-TGAAACTCATCTTCAA-----CAA---CATTTATA-TCACA-C-------AATGT------A----C-ATA--------AC-CTTCGATCT---C-TTTC-TT-T---ATA---TCT--GTAACGACCACTTTC--AATTTCCAG-TCAT-----G---AGAAC-T---CGA----
gi|62322 : aaaggcataatggagatggttgctacagatttgatcaaactgtcattttgtgttgccattaaaattgtaaacttatgtttaaggggattttaaagtatttatctgacaaatatacttcATCT----A--------GGACACTCG--AA--AA-AA---CA-TGATATTCACATTCTG-----TAA--------------------------AACAT----ATA----CAACAT--------C-TTT-GTTCT---C-TTTA-AA-T---ATG---TAT--GTGTCGTCCAGTTTT--GACATGGAGTCTAT-----GGTTTGGACAG---CAT----AAACGAGCA-AAAGCAA------TTTT---AT--A-CAT--ACGCGGTATTTCTA--TATT--TAGATA-TCTCTCTTGATC-AACTAATGTCTT
gi|62323 : CT----T--------GGA-AC-AATTGA--AA-AAT-ACA-TGATACTCGTTTTCTA-----TCA---CCATTATATT-G---------G-AATTT----A-AGAAGCAAAATAAAC---AT-ATTCTATGTTATC-CTT--AC-T---GTT---CAC--ATGTCGATCATGTTCAGTATTT--------------AACAGGCGCAT---CGA----AAACGTTCC-AGTGACC------GTTTGAGAT--T-GAA--CGAAAGA---TCAA--TGTT--TAGATA-TCTTTCAGGATT-TAATAAGGATTTAATATGT-----TTATA-TGTATCACA---TCTGGATGAGATGATTG------TATCATCA-TGTCAAGT----TTGAGTCATACAATCTGAGA-TCCTCGTTGAAATGTTAAGACAAATAGGTTA
gi|62324 : ACAC-AA--AA--AA-AA----A-TAATACTCGTCTTCCA-----TTT---CGTGTGTATT-ACA-T------------------A----CA----GTGC---AA-TATCGTTATAGTCAATTC-TA-T---TTTG--TTC--GTATCGACCAATTTC--AATTCTAAGCTTAT-----GA
gi|62325 : AC-AG--AT--AATGATGAAA-TGATACTCGTCTTCCA-----AAT---CGTGTGTATT-ACA-T-----A-AA-GT----G------CAATAT----------TTTCGGTTGTGG----TC-AA-TTCTGTTCTGTTC--ATAACGACCAGTTTC--AATTCTAAGCTTAT-----GA
gi|62326 : AC-AG--ATT-AA-AAT-AAAGTGATATTCATCTTCTA-----TAT---CGTTTTTGTT------------------------A----CAA-A-GCAC---ACATTTC---CTTTCA-TTTCTAACT---ATG---TTCCTGTGACGTCCAGTTTCTATATTTTG
gi|62327 : --AA--AA-AAT-ACA-CGGTATTTGTTTTCTA-----TCA---CCAGTGTATTCGAA-TTTAAAA-AACAG----A-A----AAACATAT------C-T----GTTTTATC-TCTC-AA-T---GTT---CAA--ATGACGATCAATTTC--AATGTTTAATCTAT-----GAAAGGAGCAT---CAA----AAATGTGCC-AGTGATC------GTTTGAGAT----TGA--AAGAAAAAT--CAAGGTTTA--AA--TA-TCTTTCCGGATT-CAATAAGGATTTAATATGT-----TTATA-TGTATCCCATC-TGGGAAA----G--TTGATG--ATATTGTCA-TGCC-AAT---TTTGAGTCA--CAATCTGAGATCCTTTGTTTAAATGTTAAGTTAAA
gi|62328 : -AA-TG--ATT---TTC-----ACGATCAGTTTC--TATTTTTAACTGG------GACTGGAGCCT---CGA----AAACGGGCT-ATTGCTT------TTTT---ATATG-TAG--AAACGG-----CAA--GACA-----------TCTCTGGATT-TAATAAAGTTTTAAAATACCAGCTTCGTCTAGTGACACA-----TGCAT----T--TTG-TA--ATGATATC
gi|62329 : --TATA--GAGCTA-TTTTTTTGGATT-TAATTAGGTTTTAAAACAT-----TTATA-GACGTTACAACG-G------------------------TACCA-TGCC-AGT---GTT-CATCATACAATtggggcaacgattacttgcattatccatatgtaaa
Alignments
lowQualScore : 11111 11111111 111111111 6666666666 1111 2222222 11111111 1111 1111111111111 1111111111111 111
lowQualScore : 55 55 8 4 0 8888 4444 33 4 66 44444 3 44 22222222 333333333 666 55 4444444444 0 3 3 555 44 1 3 3 555 5 0 33 22 4 4 3333 22 2 0000000 2 6 11111111 4 444 0000 333 4444 6666666666666 1 66 33 1 55 1 44444 333 4444444444444 555555 6666 1 333 333 1 44 1 1 1 444 444 22 333 2 77777 333 4444 2 777777 333 33 33 2 33 444 44 1 77777 2 0 88888888 2 33 3 3 555
lowQualScore : .. .. . . . .... .... .. . .. ..... . .. ........ ......... ... .. .......... . . . ... .. . . . ... . . .. .. . . .... .. . ....... . . ........ . ... .... ... .... ............. . .. .. . .. . ..... ... ............. ...... .... . ... ... . .. . . . ... ... .. ... . ..... ... .... . ...... ... .. .. . .. ... .. . ..... . . ........ . .. . . ...
lowQualScore : 33 33 9 4 1 9999 7777 22 7 55 33333 3 66 11111111 333333333 444 00 2222222222 7 6 6 444 22 5 1 1 444 0 7 22 55 7 7 9999 99 1 5555555 1 3 33333333 2 333 3333 777 5555 4444444444444 7 66 88 7 00 7 22222 000 4444444444444 888888 1111 0 000 000 7 66 7 7 7 666 666 33 333 4 44444 333 0000 5 222222 111 44 44 7 44 222 22 9 11111 9 9 55555555 9 99 1 1 444
consensus : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAA--ATATTTTACAATA-T-CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCCGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--NATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATTTAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
Reference ( family-575 ) : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAA--ATATTTTACAA-----CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCCGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--NATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATTTAATAAGGTTTTGAAATAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62295 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAA--ATATTTTACAATATT-CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTT--GTGACGACCAGTTTC--TCTTTTGAGCTTGT-----GACTAGATCAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATTTAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACATGTGGAT----T--CTG-CA--ATACTACCATTACC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62296 : AATACAA--T--ATATA-ATGTTTTATTTCCTAAACAAAGGCCTCCTGTCCAAAATACA----T
gi|62297 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAA--ATATTTTACAATATT-CTTTTCTATTATAA----GATTCA-TTTCGT-ACCAAAATAAAATGGATGTA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGTA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGATGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--ATAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATTTAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAATCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62298 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAA--ATATTT----------CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATTTAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGATAAAATAAACATATTA
gi|62299 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAA--ATATTT----------CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATTTAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62300 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAA---GTGGAA--ATATTT----------CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATTTAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62301 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAA--ATATTT----------CTTTTCTATTATAAATGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATTTAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62302 : AATACAAA-T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------TAAATAT---------GGCATACAATTTAT---GTGGAA--ATATTTTACAATATT-CTTTTTCATTATAATTGTGATTCA-TTTTGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGATAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--ATGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA--TTTAAT--ATTTAATAAAGTTTTGAAATAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCATTCTGATAGGCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62303 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAACTATGAAAT--------GAAATAT---------GGCATACAATGTAT---GTGGTA--ATATTTTACAATACT-CTTTTTTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAGTGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGATGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCG----CCGGAATACC--AA-GA-------C-TG-TAAAT-------AT-TGTA--GTCTC----AGA---TCCGT----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTG-----TAA---CGCTTATACTTGCA-T-----G-AATAT----G-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGGCGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAA-GGGAA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATATTTTTTCTGGATTTAATAATGTTTTGAAATAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATACAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATT
gi|62304 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----
gi|62305 : ATAAAA--T--ACATG-ATGTTTTATTTTGTAAACAAAGGCCTCCGACCCAAAATACA----TA----TCATTA--TTTA-CA--GCAATTT------GTA
gi|62306 : ATACAG--T--GTACA-ATGTTTTATTTCGCAAACAAAGGCCTCCAGCCTAAAATATA----TA----TCATTA--TTTA-CA--tgaggatcacatgcatgttatatttgtagttcttttttaacagacattgattcaataagatatttttcttattctataaatggcgtccagttgtagaattttgtaaacatgtaataggtcagtttcaccagagtgtcaagaaaatagaagatgacgtcaatctgatatctgggaca
gi|62307 : ACACAA--T--ATAGA-ATTATTTATTT-GTAAACAAAGGCCCCCGGCCCAAA-TACA----TA----TCATTA--TTTA-CA--
gi|62307 : TTTAA----CCAGAATACC--AA-GA-------A-AA-TAGAAGGA----AA-TGAC--GTT-------AA---TCTGA----GTATCT----A--------GGACAT--T--AA--AG-AAG-ACA-TGATATTCATCTTCTA-----gcaaattgtatgagttacacatgttaatatgtgttattctatattttttgcatacaataaattgttcttattttataagtgtcttcctgttgaagaatgttgtaataaaatgaaagataggtttaaccagaataccaagaaaatagaaggaaatgacgttaatctgagtatctaggacattaaagaagacatgatattcatcttcta
gi|62308 : acacaatatagaattatttatttgtaaacaaaggcccccggcccaaatacatatcattatttacagcaaattgtatgagttacacatgttaatatgtgttattctatattttttgcatacaataaattgttcttattttataagtgtcttcctgttgaagaatgttgtaataaaatgaaagataggATACAA--TTTACA-C--TGTTTTATTTCGTAAAAAAAGGTCTCCGACCCAAAATACA----TAATGTTCATTA--TTTA-CA--GCAATTT-----A
gi|62309 : ATACAAGAT--GCA-AGATGTTTTATTGAGTAAATGAAGGCCTCCGGCCCAAAATACAACACTA------ATTG--TTGATCATCGATGTTTTTCAAAGTTG-TGTTACAATATATTAAATATACATTTGAAGTGTCTGAAAACCGG--TACAGTATATAATGTGGAACTATGTTTTAT-------CTTT--------AATTTTTAAACAGTTTTGT---TAAAAAAAGAGCAATGTT---TTTA--A-TAGTCTC-TG-GA-TTC----------TCGCTT---TGAAGGAATCGATAAAA--ATCT-----G-TATGTTCTGAATGTCCTATATACC--AA----------T-TA-TACAG-------ATGTGTA---TCTCCA--ACA---TGAGT----ATA-CT----T--------AGA-AC-AATTAG--AA-AAT-AC--TAGTATTCGTTTTCTA-----TCA---CCATTATATT-----T-----G-AATTTAAGAA-A----CAAAATAAAC---AT-ATTCTATTTTCAG-TTTC-AA-T---GTT---AAA--ATGTTGACCAATTCC--AATATTTAGTCTGTGAGAGGAGTACAGCATTTACGA----AAAC
gi|62310 : TATAA--T--ACA-A-ATTCTTTATTTCGTGAATAGAGGCCTACGGCCCAAAGTACA----TA----CCATTA--TTTA-CA--AGCATTT-----GGTAG-TGT--CAAAATATAAAAT--------GATATAT---------GGCAAACAATTTAT---GTGGAA--ATATTTTATAAATAATCTTTT-TATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAGTGGACATA---TGCA--GCTAGTTTCCTA-AG-TGTGA---AGGTATCATTTAGTTGTAGTAGCTGATAAAA--CTCTTCTAAG-T-TATTTTCA----CAAGAATACT--AT-GA-------T-TG-TAAAC-------AT-CGTA--GTCTC----TGA---TCCGC----ATATCT----C--------AGACAC-AG--AA--AG-AAT-ACA-TGATATTCGTCTTTTA-----GAA---TGGTTATATTTGCA-T-----G-AATAT----A-A----CAATATGTGC---AC-TTTCGGTCTTGCC-TTTT-AA-T---ATT---TTC--GTGGCGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---AGA----AAACGGG
gi|62311 : TACAA--TT-ACA-A-ACCTTTTATTTCATAAACAGAGGCATCTGGCCCAAAATACA----TA----TGTTTAGTTTTA-CA--AACATTT-----A--AGTTGT--CA--------------------AAGTAT---------GGCATAAAATTTAT---GTGGAA--ATGTTTTA
gi|62312 : A--T--ACA-AGATGTTTTATTGAGTAAATAAAGGCCTCCGGCCCAAAATACAACAGTA------ATTA--TTGATCATTGATGTTTTACAAAGTTG-TGT--TACAATAT---AT--------TAAATAT---------
gi|62313 : TTTCGTAAACAAATGCCTCTAGACAATAATACA----TA----TCATTA--TTTA-CA--acatttgaagtgtctgaaaactggtacagtat
gi|62314 : TATAACTGATATTCA-TTTTGTTATTAGA-TAAA--GGTTACA---TACACGGCTAATTT---------TTGA------------TTAGTTGTAACAGATGATAACA--ATCTACTTGG-T-TATTTTCA----TTCAAATACCTGAA-GA-------CATG----AC-------AA-TG-ACTGTCTT----AAA---TCTGC----ACATTT----T--------TGACAC-AA--AA--A
gi|62315 : AAAGGCATA-A---TGGA--GATGGTTGC-TACAGATTTGATCAAACTGTCATTT---TGT-GTTGCCATTAAAA-----TTGTAAACT-TATGTTTA----AGGGGATTTT--AA-AGTATTTATC-TGACAAAT-------AT-ACTT--CTCTT----AAA---TCTGT----ATATATATTAC--------A-ACAC-AG--TA--AA-AA----G-TGAAACTCATCTTCAA-----CAA---CATTTATA-TCACA-C-------AATGT------A----C-ATA--------AC-CTTCGATCT---C-TTTC-TT-T---ATA---TCT--GTAACGACCACTTTC--AATTTCCAG-TCAT-----G---AGAAC-T---CGA----
gi|62316 : AATGGAGATAAGTTGCT--ACCAGTTT--TA------TCA---AACTGTCATTT---TGTGAT-GCC-ATTAAA--ATTGT-TAAC-T-TATGGTCAG---TTGGATTATT--AA-AATATTTATC-TGGCAAAT-------AT-GCT----TCTCCCTTAAA---TCTGT----ATATATATATT--------GCA-AC-AG--TA--AA-AA----G-TGAAACTTATCTTCTA-----CAA---CATTTACA-TCACA-C-------AATGT------A----C-ATA--------AC-CTTCGATCT---C-TTTC-TA-T---ATT---TAT--GTAACGACCCCTTTC--AATTTCCAGGTCAT-----G---AGAAC-T---CGA----
gi|62317 : TGTCATTT---TGT-GTTGCCATTAAAA-----TGATAAACT-TATGTTCAG---TTGGATTATC--AA-AATATTTATC-TGGCAAAT-------AT-GATT--CTCTT----AAA---TCTGT----ATATATATTAC--------A-ACAC-AG--TA--AA-AAT-----TGAAACTCATCTTCTA-----CAA---CATTTACA-TCAC---------------------A----CA--ATGTACATTAC-CTTCGATCT---C-TTTC-TA-T---ATT---TCT--GTAACGACC-CTTTC--AATTTCCAGGTCAT-----G---AGAAC-T---CGATCTGAAGCTTGCATAGATATGACGAAATTTT---CT--G------------ATATTTAG--TACATGGAGATA-CTTTTC
gi|62318 : GTTGAAGCAATCGATAAAA--ATCT-----G-TATGTTCTGAATGTCCTATATACC--AA----------T-TA-TACAG-------ATGTGT---TTCTCTA--ACA---TGGGT----ATA-CT----T--------AGA-AC-AATTAA--AA-AAT-ACA-TGGTATTCGTTTTCTA-----TCA---CCATTATATTGGAA-T-----TTAAGA-----A-A----CAAAATAAAC---AT-ATTCTATTTTCTC-TTTC-AA-T---TTT---AAA--ATGTCGACCAATTTC--AATATTTAGTCGAT-----GAGAGGAGCAT---CTA----AAACGTGCA-AATGATC------GTTTGAGAT--TGAACGAAAGG------TCAA--TGTT--TAAATA-TCTTTCAGGATTTAATAAGGATTTAATATGT-----TTATA-TGTACCTGGGTGAGTTGAT----T----------ATATCATCA-TGCC-AAG---ATTGAGTCATACAATCTGAGATTAAACGTTTAAATATTAA
gi|62319 : TAAAACAATCTTTTACG-T-TATTTTCA----CTGAAATATC--AA-GA-------C-TG-TAAAA-------AT-CGAC--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AA--AAGGAA-AA--ACA-TGATATACATTTTCTA-----GAA---TGTTTATATTTGCA-T-----T-AATAT----A-A----CAATAAGTAA---AC-TTTCGGTCTTCCC-TTTC-AA-T---ATA---TTC--GTGGTGACTAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAC---GGA----AAACAGGCA-AGAGA-T------TTTT---AT--GCAA--ATAGAGAAT-TTCAA--TACA--AAGGTA-TTTTTCTGGATTGTATAAGGTTTTGTTATAC-----TTTTA-AGTGTCCAAACATGCAGAT--------TA-CAAGATACTACCA-TGCC-AGTATAACTTGGGCATGCAAACTGATAGTCGTTG---AAATGCTAAAATAAACATA
gi|62320 : --ATCTAATAAA-T-AAGTTTCA----CCATAGCACC--AA-GA-------C-TG-TAGAAGGATTTGAC-TGTA--GTCTG----AG--------------TATCA----A--------GGACAT-AT--AC--TC-AAT-ACA-TGACATTCATTTTCTAATACATGAGAGTGTTCA-ATTAGTAAT-----C-AATA-----A-AGG--CAAGA---AC---AC-TTTT-------CC-GATG-AA-A---ATT---TTA--ATGACGACCGGTTTC--TATTTTCAACGTGTTAA--GACCGGAATAT---CGA----TAACGAGCC-ATTGA-T------TTGT---AT--GTAC--AAA
gi|62321 : CC--AATGG-------C-AG-TAAAT-------AT-T-TA--GG-------AGACAATCCGTTGTAATATCT----CTATAGAAAGGACAA-AC--AA--TA-ACA-AAA-TGATATTCGTCTTCCA-----C---------TACATTC-------------ATCT----G-A----CAATATATAC---AT-TTTCTATCTGATC-TATC-TA-T---ATT---TCT--ATAACGACCCTCTTC--AATGGCAAGTTTGT-----GAGCGGAACAA---CGT----AA
gi|62322 : ATCT----A--------GGACACTCG--AA--AA-AA---CA-TGATATTCACATTCTG-----TAA--------------------------AACAT----ATA----CAACAT--------C-TTT-GTTCT---C-TTTA-AA-T---ATG---TAT--GTGTCGTCCAGTTTT--GACATGGAGTCTAT-----GGTTTGGACAG---CAT----AAACGAGCA-AAAGCAA------TTTT---AT--ACAT--ACGCGGTAT-TTCTA--TATT--TAGATA-TCTCTCTTGATCAACTAATGTCTT
gi|62323 : CT----T--------GGA-AC-AATTGA--AA-AAT-ACA-TGATACTCGTTTTCTA-----TCA---CCATTATATT-G---------G-AATTT----A-AGAAGCAAAATAAAC---AT-ATTCTATGTTATC-CTT--AC-T---GTT---CAC--ATGTCGATCATGTTC--AGTATT-------T-----AACAGGCGCAT---CGA----AAACGTTCC-AGTGACC------GTTTGAGAT--TGAA--CGAAAGA----TCAA--TGTT--TAGATA-TCTTTCAGGATTTAATAAGGATTTAATATGT-----TTATA-TGTATCACA---TCTGGATGAGATGATTG------TATCATCA-TGTCAAGT----TTGAGTCATACAATCTGAGA-TCCTCGTTGAAATGTTAAGACAAATAGGTTA
gi|62324 : ACAC-AA--AA--AA-AA----A-TAATACTCGTCTTCCA-----TTT---CGTGTGTATT-ACA-T------------------A----CA----GTGC---AA-TATCGTTATAGTCAATTC-TA-T---TTTG--TTC--GTATCGACCAATTTC--AATTCTAAGCTTAT-----GA
gi|62325 : AC-AG--AT--AATGATGAAA-TGATACTCGTCTTCCA-----AAT---CGTGTGTATT-ACA-T-----A-AA-GT----G------CAATAT----------TTTCGGTTGTGG----TC-AA-TTCTGTTCTGTTC--ATAACGACCAGTTTC--AATTCTAAGCTTAT-----GA
gi|62326 : AC-AG--ATT-AA-AAT-AAAGTGATATTCATCTTCTA-----TAT---CGTTTTTGTT------------------------A----CAA-A-GCAC---ACATTTC---CTTTCA-TTTCTAACT---ATG---TTCCTGTGACGTCCAGTTTCTATATTTTG
gi|62327 : --AA--AA-AAT-ACA-CGGTATTTGTTTTCTA-----TCA---CCAGTGTATTCGAA-TTTAAAA-AACAG----A-A----AAACATAT------C-T----GTTTTATC-TCTC-AA-T---GTT---CAA--ATGACGATCAATTTC--AATGTTTAATCTAT-----GAAAGGAGCAT---CAA----AAATGTGCC-AGTGATC------GTTTGAGAT---TGA--AAGAAAAAT---CAAGGTTTA--AA--TA-TCTTTCCGGATTCAATAAGGATTTAATATGT-----TTATA-TGTATCCCATC-TGGGAAA----G--TTGATG--ATATTGTCA-TGCC-AAT---TTTGAGTCA--CAATCTGAGATCCTTTGTTTAAATGTTAAGTTAAA
gi|62328 : -AA-TG--ATT---TTC-----ACGATCAGTTTC--TATTTTTAACTGG------GACTGGAGCCT---CGA----AAACGGGCT-ATTGCTT------TTTT---ATATGTAG--AAACGG------CAA--GACA-----------TCTCTGGATTTAATAAAGTTTTAAAATACCAGCTTCGTCTAGTGACACA-----TGCAT----T--TTG-TA--ATGATATC
gi|62329 : --TATA--GAGCTA-TTTTTTTGGATTTAATTAGGTTTTAAAACAT-----TTATA-GACGTTACAACG-G------------------------TACCA-TGCC-AGT---GTT-CATCATACAATtggggcaacgattacttgcattatccatatgtaaa
Alignments
lowQualScore : 11111 11111111 111111111 44444444444 1111 2222222 11111111 1111 1111111111111 1111111111111 111
lowQualScore : 55 55 8 4 0 8888 4444 33 4 66 44444 3 44 22222222 333333333 666 3 88888888888 0 3 3 555 44 1 3 3 555 5 0 33 22 4 4 3333 22 2 0000000 2 6 11111111 4 444 0000 333 4444 6666666666666 1 66 33 1 55 1 44444 333 4444444444444 555555 6666 1 333 333 1 44 1 1 1 444 444 22 333 2 77777 333 4444 2 777777 333 33 33 2 33 444 44 2 2 77777 2 0 88888888 2 33 3 3 555
lowQualScore : .. .. . . . .... .... .. . .. ..... . .. ........ ......... ... . ........... . . . ... .. . . . ... . . .. .. . . .... .. . ....... . . ........ . ... .... ... .... ............. . .. .. . .. . ..... ... ............. ...... .... . ... ... . .. . . . ... ... .. ... . ..... ... .... . ...... ... .. .. . .. ... .. . . ..... . . ........ . .. . . ...
lowQualScore : 33 33 9 4 1 9999 7777 22 7 55 33333 3 66 11111111 333333333 444 6 99999999999 7 6 6 444 22 5 1 1 444 0 7 22 55 7 7 9999 99 1 5555555 1 3 33333333 2 333 3333 777 5555 4444444444444 7 66 88 7 00 7 22222 000 4444444444444 888888 1111 0 000 000 7 66 7 7 7 666 666 33 333 4 44444 333 0000 5 222222 111 44 44 7 44 222 22 7 5 11111 9 9 55555555 9 99 1 1 444
consensus : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTACAA-TA-T-CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCCGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--NATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
Reference ( family-575 ) : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTACAA-TA-T-CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCCGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--NATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62295 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTACAA-TA-TTCTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTT--GTGACGACCAGTTTC--TCTTTTGAGCTTGT-----GACTAGATCAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACATGTGGAT----T--CTG-CA--ATACTACCATTACC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62296 : AATACAA--T--ATATA-ATGTTTTATTTCCTAAACAAAGGCCTCCTGTCCAAAATACA----T
gi|62297 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTACAA-TA-TTCTTTTCTATTATAA----GATTCA-TTTCGT-ACCAAAATAAAATGGATGTA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGTA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGATGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--ATAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAATCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62298 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TT-----------CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGATAAAATAAACATATTA
gi|62299 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TT-----------CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62300 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAA---GTGGAAATAT-TT-----------CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62301 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TT-----------CTTTTCTATTATAAATGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62302 : AATACAAA-T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------TAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTACAA-TA-TTCTTTTTCATTATAATTGTGATTCA-TTTTGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGATAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--ATGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA--TTTAAT--ATT-TAATAAAGTTTTGAAATAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCATTCTGATAGGCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62303 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAACTATGAAAT--------GAAATAT---------GGCATACAATGTAT---GTGGTAATAT-TTTACAA-TACT-CTTTTTTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAGTGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGATGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCG----CCGGAATACC--AA-GA-------C-TG-TAAAT-------AT-TGTA--GTCTC----AGA---TCCGT----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTG-----TAA---CGCTTATACTTGCA-T-----G-AATAT----G-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGGCGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAA-GGGAA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATATTTTTTCTGGATT-TAATAATGTTTTGAAATAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATACAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATT
gi|62304 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----
gi|62305 : ATAAAA--T--ACATG-ATGTTTTATTTTGTAAACAAAGGCCTCCGACCCAAAATACA----TA----TCATTA--TTTA-CA--GCAATTT------GTA
gi|62306 : ATACAG--T--GTACA-ATGTTTTATTTCGCAAACAAAGGCCTCCAGCCTAAAATATA----TA----TCATTA--TTTA-CA--tgaggatcacatgcatgttatatttgtagttcttttttaacagacattgattcaataagatatttttcttattctataaatggcgtccagttgtagaattttgtaaacatgtaataggtcagtttcaccagagtgtcaagaaaatagaagatgacgtcaatctgatatctgggaca
gi|62307 : ACACAA--T--ATAGA-ATTATTTATTT-GTAAACAAAGGCCCCCGGCCCAAA-TACA----TA----TCATTA--TTTA-CA--
gi|62307 : TTTAA----CCAGAATACC--AA-GA-------A-AA-TAGAAGGA----AA-TGAC--GTT-------AA---TCTGA----GTATCT----A--------GGACAT--T--AA--AG-AAG-ACA-TGATATTCATCTTCTA-----gcaaattgtatgagttacacatgttaatatgtgttattctatattttttgcatacaataaattgttcttattttataagtgtcttcctgttgaagaatgttgtaataaaatgaaagataggtttaaccagaataccaagaaaatagaaggaaatgacgttaatctgagtatctaggacattaaagaagacatgatattcatcttcta
gi|62308 : acacaatatagaattatttatttgtaaacaaaggcccccggcccaaatacatatcattatttacagcaaattgtatgagttacacatgttaatatgtgttattctatattttttgcatacaataaattgttcttattttataagtgtcttcctgttgaagaatgttgtaataaaatgaaagataggATACAA--TTTACA-C--TGTTTTATTTCGTAAAAAAAGGTCTCCGACCCAAAATACA----TAATGTTCATTA--TTTA-CA--GCAATTT-----A
gi|62309 : ATACAAGAT--GCA-AGATGTTTTATTGAGTAAATGAAGGCCTCCGGCCCAAAATACAACACTA------ATTG--TTGATCATCGATGTTTTTCAAAGTTG-TGTTACAATATATTAAATATACATTTGAAGTGTCTGAAAACCGG--TACAGTATATAATGTGGAACTATGTTT-----TA-T-CTTT--------AATTTTTAAACAGTTTTGT---TAAAAAAAGAGCAATGTT---TTTA--A-TAGTCTC-TG-GA-TTC----------TCGCTT---TGAAGGAATCGATAAAA--ATCT-----G-TATGTTCTGAATGTCCTATATACC--AA----------T-TA-TACAG-------ATGTGTA---TCTCCA--ACA---TGAGT----ATA-CT----T--------AGA-AC-AATTAG--AA-AAT-AC--TAGTATTCGTTTTCTA-----TCA---CCATTATATT-----T-----G-AATTTAAGAA-A----CAAAATAAAC---AT-ATTCTATTTTCAG-TTTC-AA-T---GTT---AAA--ATGTTGACCAATTCC--AATATTTAGTCTGTGAGAGGAGTACAGCATTTACGA----AAAC
gi|62310 : TATAA--T--ACA-A-ATTCTTTATTTCGTGAATAGAGGCCTACGGCCCAAAGTACA----TA----CCATTA--TTTA-CA--AGCATTT-----GGTAG-TGT--CAAAATATAAAAT--------GATATAT---------GGCAAACAATTTAT---GTGGAAATAT-TTTATAAATAAT-CTTTT-TATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAGTGGACATA---TGCA--GCTAGTTTCCTA-AG-TGTGA---AGGTATCATTTAGTTGTAGTAGCTGATAAAA--CTCTTCTAAG-T-TATTTTCA----CAAGAATACT--AT-GA-------T-TG-TAAAC-------AT-CGTA--GTCTC----TGA---TCCGC----ATATCT----C--------AGACAC-AG--AA--AG-AAT-ACA-TGATATTCGTCTTTTA-----GAA---TGGTTATATTTGCA-T-----G-AATAT----A-A----CAATATGTGC---AC-TTTCGGTCTTGCC-TTTT-AA-T---ATT---TTC--GTGGCGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---AGA----AAACGGG
gi|62311 : TACAA--TT-ACA-A-ACCTTTTATTTCATAAACAGAGGCATCTGGCCCAAAATACA----TA----TGTTTAGTTTTA-CA--AACATTT-----A--AGTTGT--CA--------------------AAGTAT---------GGCATAAAATTTAT---GTGGAAATGT-TTTA
gi|62312 : A--T--ACA-AGATGTTTTATTGAGTAAATAAAGGCCTCCGGCCCAAAATACAACAGTA------ATTA--TTGATCATTGATGTTTTACAAAGTTG-TGT--TACAATAT---AT--------TAAATAT---------
gi|62313 : TTTCGTAAACAAATGCCTCTAGACAATAATACA----TA----TCATTA--TTTA-CA--acatttgaagtgtctgaaaactggtacagtat
gi|62314 : TATAACTGATATTCA-TTTTGTTATTAGA-TAAA--GGTTACA---TACACGGCTAATTT---------TTGA------------TTAGTTGTAACAGATGATAACA--ATCTACTTGG-T-TATTTTCA----TTCAAATACCTGAA-GA-------CATG----AC-------AA-TG-ACTGTCTT----AAA---TCTGC----ACATTT----T--------TGACAC-AA--AA--A
gi|62315 : AAAGGCATA-A---TGGA--GATGGTTGC-TACAGATTTGATCAAACTGTCATTT---TGT-GTTGCCATTAAAA-----TTGTAAACT-TATGTTTA----AGGGGATTTT--AA-AGTATTTATC-TGACAAAT-------AT-ACTT--CTCTT----AAA---TCTGT----ATATATATTAC--------A-ACAC-AG--TA--AA-AA----G-TGAAACTCATCTTCAA-----CAA---CATTTATA-TCACA-C-------AATGT------A----C-ATA--------AC-CTTCGATCT---C-TTTC-TT-T---ATA---TCT--GTAACGACCACTTTC--AATTTCCAG-TCAT-----G---AGAAC-T---CGA----
gi|62316 : AATGGAGATAAGTTGCT--ACCAGTTT--TA------TCA---AACTGTCATTT---TGTGAT-GCC-ATTAAA--ATTGT-TAAC-T-TATGGTCAG---TTGGATTATT--AA-AATATTTATC-TGGCAAAT-------AT-GCT----TCTCCCTTAAA---TCTGT----ATATATATATT--------GCA-AC-AG--TA--AA-AA----G-TGAAACTTATCTTCTA-----CAA---CATTTACA-TCACA-C-------AATGT------A----C-ATA--------AC-CTTCGATCT---C-TTTC-TA-T---ATT---TAT--GTAACGACCCCTTTC--AATTTCCAGGTCAT-----G---AGAAC-T---CGA----
gi|62317 : TGTCATTT---TGT-GTTGCCATTAAAA-----TGATAAACT-TATGTTCAG---TTGGATTATC--AA-AATATTTATC-TGGCAAAT-------AT-GATT--CTCTT----AAA---TCTGT----ATATATATTAC--------A-ACAC-AG--TA--AA-AAT-----TGAAACTCATCTTCTA-----CAA---CATTTACA-TCAC---------------------A----CA--ATGTACATTAC-CTTCGATCT---C-TTTC-TA-T---ATT---TCT--GTAACGACC-CTTTC--AATTTCCAGGTCAT-----G---AGAAC-T---CGATCTGAAGCTTGCATAGATATGACGAAATTTT---CT--G------------ATATTTAG--TACATGGAGATA-CTTTTC
gi|62318 : GTTGAAGCAATCGATAAAA--ATCT-----G-TATGTTCTGAATGTCCTATATACC--AA----------T-TA-TACAG-------ATGTGT---TTCTCTA--ACA---TGGGT----ATA-CT----T--------AGA-AC-AATTAA--AA-AAT-ACA-TGGTATTCGTTTTCTA-----TCA---CCATTATATTGGAA-T-----TTAAGA-----A-A----CAAAATAAAC---AT-ATTCTATTTTCTC-TTTC-AA-T---TTT---AAA--ATGTCGACCAATTTC--AATATTTAGTCGAT-----GAGAGGAGCAT---CTA----AAACGTGCA-AATGATC------GTTTGAGAT--TGAACGAAAGG------TCAA--TGTT--TAAATA-TCTTTCAGGATT-TAATAAGGATTTAATATGT-----TTATA-TGTACCTGGGTGAGTTGAT----T----------ATATCATCA-TGCC-AAG---ATTGAGTCATACAATCTGAGATTAAACGTTTAAATATTAA
gi|62319 : TAAAACAATCTTTTACG-T-TATTTTCA----CTGAAATATC--AA-GA-------C-TG-TAAAA-------AT-CGAC--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AA--AAGGAA-AA--ACA-TGATATACATTTTCTA-----GAA---TGTTTATATTTGCA-T-----T-AATAT----A-A----CAATAAGTAA---AC-TTTCGGTCTTCCC-TTTC-AA-T---ATA---TTC--GTGGTGACTAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAC---GGA----AAACAGGCA-AGAGA-T------TTTT---AT--GCAA--ATAGAGAAT-TTCAA--TACA--AAGGTA-TTTTTCTGGATTGTA-TAAGGTTTTGTTATAC-----TTTTA-AGTGTCCAAACATGCAGAT--------TA-CAAGATACTACCA-TGCC-AGTATAACTTGGGCATGCAAACTGATAGTCGTTG---AAATGCTAAAATAAACATA
gi|62320 : --ATCTAATAAA-T-AAGTTTCA----CCATAGCACC--AA-GA-------C-TG-TAGAAGGATTTGAC-TGTA--GTCTG----AG--------------TATCA----A--------GGACAT-AT--AC--TC-AAT-ACA-TGACATTCATTTTCTAATACATGAGAGTGTTCA-ATTAGTAAT-----C-AATA-----A-AGG--CAAGA---AC---AC-TTTT-------CC-GATG-AA-A---ATT---TTA--ATGACGACCGGTTTC--TATTTTCAACGTGTTAA--GACCGGAATAT---CGA----TAACGAGCC-ATTGA-T------TTGT---AT--GTAC--AAA
gi|62321 : CC--AATGG-------C-AG-TAAAT-------AT-T-TA--GG-------AGACAATCCGTTGTAATATCT----CTATAGAAAGGACAA-AC--AA--TA-ACA-AAA-TGATATTCGTCTTCCA-----C---------TACATTC-------------ATCT----G-A----CAATATATAC---AT-TTTCTATCTGATC-TATC-TA-T---ATT---TCT--ATAACGACCCTCTTC--AATGGCAAGTTTGT-----GAGCGGAACAA---CGT----AA
gi|62322 : ATCT----A--------GGACACTCG--AA--AA-AA---CA-TGATATTCACATTCTG-----TAA--------------------------AACAT----ATA----CAACAT--------C-TTT-GTTCT---C-TTTA-AA-T---ATG---TAT--GTGTCGTCCAGTTTT--GACATGGAGTCTAT-----GGTTTGGACAG---CAT----AAACGAGCA-AAAGCAA------TTTT---AT--ACAT--ACGCGGTAT-TTCTA--TATT--TAGATA-TCTCTCTTGATC-AACTAATGTCTT
gi|62323 : CT----T--------GGA-AC-AATTGA--AA-AAT-ACA-TGATACTCGTTTTCTA-----TCA---CCATTATATT-G---------G-AATTT----A-AGAAGCAAAATAAAC---AT-ATTCTATGTTATC-CTT--AC-T---GTT---CAC--ATGTCGATCATGTTC--AGTATT-------T-----AACAGGCGCAT---CGA----AAACGTTCC-AGTGACC------GTTTGAGAT--TGAA--CGAAAGA----TCAA--TGTT--TAGATA-TCTTTCAGGATT-TAATAAGGATTTAATATGT-----TTATA-TGTATCACA---TCTGGATGAGATGATTG------TATCATCA-TGTCAAGT----TTGAGTCATACAATCTGAGA-TCCTCGTTGAAATGTTAAGACAAATAGGTTA
gi|62324 : ACAC-AA--AA--AA-AA----A-TAATACTCGTCTTCCA-----TTT---CGTGTGTATT-ACA-T------------------A----CA----GTGC---AA-TATCGTTATAGTCAATTC-TA-T---TTTG--TTC--GTATCGACCAATTTC--AATTCTAAGCTTAT-----GA
gi|62325 : AC-AG--AT--AATGATGAAA-TGATACTCGTCTTCCA-----AAT---CGTGTGTATT-ACA-T-----A-AA-GT----G------CAATAT----------TTTCGGTTGTGG----TC-AA-TTCTGTTCTGTTC--ATAACGACCAGTTTC--AATTCTAAGCTTAT-----GA
gi|62326 : AC-AG--ATT-AA-AAT-AAAGTGATATTCATCTTCTA-----TAT---CGTTTTTGTT------------------------A----CAA-A-GCAC---ACATTTC---CTTTCA-TTTCTAACT---ATG---TTCCTGTGACGTCCAGTTTCTATATTTTG
gi|62327 : --AA--AA-AAT-ACA-CGGTATTTGTTTTCTA-----TCA---CCAGTGTATTCGAA-TTTAAAA-AACAG----A-A----AAACATAT------C-T----GTTTTATC-TCTC-AA-T---GTT---CAA--ATGACGATCAATTTC--AATGTTTAATCTAT-----GAAAGGAGCAT---CAA----AAATGTGCC-AGTGATC------GTTTGAGAT---TGA--AAGAAAAAT---CAAGGTTTA--AA--TA-TCTTTCCGGATT-CAATAAGGATTTAATATGT-----TTATA-TGTATCCCATC-TGGGAAA----G--TTGATG--ATATTGTCA-TGCC-AAT---TTTGAGTCA--CAATCTGAGATCCTTTGTTTAAATGTTAAGTTAAA
gi|62328 : -AA-TG--ATT---TTC-----ACGATCAGTTTC--TATTTTTAACTGG------GACTGGAGCCT---CGA----AAACGGGCT-ATTGCTT------TTTT---ATATGTAG--AAACGG------CAA--GACA-----------TCTCTGGATT-TAATAAAGTTTTAAAATACCAGCTTCGTCTAGTGACACA-----TGCAT----T--TTG-TA--ATGATATC
gi|62329 : --TATA--GAGCTA-TTTTTTTGGATT-TAATTAGGTTTTAAAACAT-----TTATA-GACGTTACAACG-G------------------------TACCA-TGCC-AGT---GTT-CATCATACAATtggggcaacgattacttgcattatccatatgtaaa
Alignments
lowQualScore : 11111 11111111 111111111 44444444444 1111 2222222 11111111 1111 1111111111111 1111111111111 111
lowQualScore : 55 55 8 4 0 8888 4444 33 4 66 44444 3 44 22222222 333333333 666 3 88888888888 0 3 3 555 44 1 3 3 555 5 0 33 22 4 4 3333 22 2 0000000 2 6 11111111 4 444 0000 333 4444 6666666666666 1 66 33 1 55 1 44444 333 4444444444444 555555 6666 1 333 333 1 44 1 1 1 444 444 22 333 2 77777 333 4444 2 777777 333 33 33 2 33 444 44 2 2 77777 2 0 88888888 2 33 3 3 555
lowQualScore : .. .. . . . .... .... .. . .. ..... . .. ........ ......... ... . ........... . . . ... .. . . . ... . . .. .. . . .... .. . ....... . . ........ . ... .... ... .... ............. . .. .. . .. . ..... ... ............. ...... .... . ... ... . .. . . . ... ... .. ... . ..... ... .... . ...... ... .. .. . .. ... .. . . ..... . . ........ . .. . . ...
lowQualScore : 33 33 9 4 1 9999 7777 22 7 55 33333 3 66 11111111 333333333 444 6 99999999999 7 6 6 444 22 5 1 1 444 0 7 22 55 7 7 9999 99 1 5555555 1 3 33333333 2 333 3333 777 5555 4444444444444 7 66 88 7 00 7 22222 000 4444444444444 888888 1111 0 000 000 7 66 7 7 7 666 666 33 333 4 44444 333 0000 5 222222 111 44 44 7 44 222 22 7 5 11111 9 9 55555555 9 99 1 1 444
consensus : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTACAA-TA-T-CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCCGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--NATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
Reference ( family-575 ) : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTACAA-TA-T-CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCCGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--NATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62295 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTACAA-TA-TTCTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTT--GTGACGACCAGTTTC--TCTTTTGAGCTTGT-----GACTAGATCAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACATGTGGAT----T--CTG-CA--ATACTACCATTACC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62296 : AATACAA--T--ATATA-ATGTTTTATTTCCTAAACAAAGGCCTCCTGTCCAAAATACA----T
gi|62297 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTACAA-TA-TTCTTTTCTATTATAA----GATTCA-TTTCGT-ACCAAAATAAAATGGATGTA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGTA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGATGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--ATAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAATCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62298 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TT-----------CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGATAAAATAAACATATTA
gi|62299 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TT-----------CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62300 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAA---GTGGAAATAT-TT-----------CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62301 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TT-----------CTTTTCTATTATAAATGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62302 : AATACAAA-T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------TAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTACAA-TA-TTCTTTTTCATTATAATTGTGATTCA-TTTTGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGATAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--ATGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA--TTTAAT--ATT-TAATAAAGTTTTGAAATAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCATTCTGATAGGCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62303 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAACTATGAAAT--------GAAATAT---------GGCATACAATGTAT---GTGGTAATAT-TTTACAA-TACT-CTTTTTTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAGTGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGATGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCG----CCGGAATACC--AA-GA-------C-TG-TAAAT-------AT-TGTA--GTCTC----AGA---TCCGT----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTG-----TAA---CGCTTATACTTGCA-T-----G-AATAT----G-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGGCGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAA-GGGAA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATATTTTTTCTGGATT-TAATAATGTTTTGAAATAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATACAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATT
gi|62304 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----
gi|62305 : ATAAAA--T--ACATG-ATGTTTTATTTTGTAAACAAAGGCCTCCGACCCAAAATACA----TA----TCATTA--TTTA-CA--GCAATTT------GTA
gi|62306 : ATACAG--T--GTACA-ATGTTTTATTTCGCAAACAAAGGCCTCCAGCCTAAAATATA----TA----TCATTA--TTTA-CA--tgaggatcacatgcatgttatatttgtagttcttttttaacagacattgattcaataagatatttttcttattctataaatggcgtccagttgtagaattttgtaaacatgtaataggtcagtttcaccagagtgtcaagaaaatagaagatgacgtcaatctgatatctgggaca
gi|62307 : ACACAA--T--ATAGA-ATTATTTATTT-GTAAACAAAGGCCCCCGGCCCAAA-TACA----TA----TCATTA--TTTA-CA--
gi|62307 : TTTAA----CCAGAATACC--AA-GA-------A-AA-TAGAAGGA----AA-TGAC--GTT-------AA---TCTGA----GTATCT----A--------GGACAT--T--AA--AG-AAG-ACA-TGATATTCATCTTCTA-----gcaaattgtatgagttacacatgttaatatgtgttattctatattttttgcatacaataaattgttcttattttataagtgtcttcctgttgaagaatgttgtaataaaatgaaagataggtttaaccagaataccaagaaaatagaaggaaatgacgttaatctgagtatctaggacattaaagaagacatgatattcatcttcta
gi|62308 : acacaatatagaattatttatttgtaaacaaaggcccccggcccaaatacatatcattatttacagcaaattgtatgagttacacatgttaatatgtgttattctatattttttgcatacaataaattgttcttattttataagtgtcttcctgttgaagaatgttgtaataaaatgaaagataggATACAA--TTTACA-C--TGTTTTATTTCGTAAAAAAAGGTCTCCGACCCAAAATACA----TAATGTTCATTA--TTTA-CA--GCAATTT-----A
gi|62309 : ATACAAGAT--GCA-AGATGTTTTATTGAGTAAATGAAGGCCTCCGGCCCAAAATACAACACTA------ATTG--TTGATCATCGATGTTTTTCAAAGTTG-TGTTACAATATATTAAATATACATTTGAAGTGTCTGAAAACCGG--TACAGTATATAATGTGGAACTATGTTT-----TA-T-CTTT--------AATTTTTAAACAGTTTTGT---TAAAAAAAGAGCAATGTT---TTTA--A-TAGTCTC-TG-GA-TTC----------TCGCTT---TGAAGGAATCGATAAAA--ATCT-----G-TATGTTCTGAATGTCCTATATACC--AA----------T-TA-TACAG-------ATGTGTA---TCTCCA--ACA---TGAGT----ATA-CT----T--------AGA-AC-AATTAG--AA-AAT-AC--TAGTATTCGTTTTCTA-----TCA---CCATTATATT-----T-----G-AATTTAAGAA-A----CAAAATAAAC---AT-ATTCTATTTTCAG-TTTC-AA-T---GTT---AAA--ATGTTGACCAATTCC--AATATTTAGTCTGTGAGAGGAGTACAGCATTTACGA----AAAC
gi|62310 : TATAA--T--ACA-A-ATTCTTTATTTCGTGAATAGAGGCCTACGGCCCAAAGTACA----TA----CCATTA--TTTA-CA--AGCATTT-----GGTAG-TGT--CAAAATATAAAAT--------GATATAT---------GGCAAACAATTTAT---GTGGAAATAT-TTTATAAATAAT-CTTTT-TATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAGTGGACATA---TGCA--GCTAGTTTCCTA-AG-TGTGA---AGGTATCATTTAGTTGTAGTAGCTGATAAAA--CTCTTCTAAG-T-TATTTTCA----CAAGAATACT--AT-GA-------T-TG-TAAAC-------AT-CGTA--GTCTC----TGA---TCCGC----ATATCT----C--------AGACAC-AG--AA--AG-AAT-ACA-TGATATTCGTCTTTTA-----GAA---TGGTTATATTTGCA-T-----G-AATAT----A-A----CAATATGTGC---AC-TTTCGGTCTTGCC-TTTT-AA-T---ATT---TTC--GTGGCGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---AGA----AAACGGG
gi|62311 : TACAA--TT-ACA-A-ACCTTTTATTTCATAAACAGAGGCATCTGGCCCAAAATACA----TA----TGTTTAGTTTTA-CA--AACATTT-----A--AGTTGT--CA--------------------AAGTAT---------GGCATAAAATTTAT---GTGGAAATGT-TTTA
gi|62312 : A--T--ACA-AGATGTTTTATTGAGTAAATAAAGGCCTCCGGCCCAAAATACAACAGTA------ATTA--TTGATCATTGATGTTTTACAAAGTTG-TGT--TACAATAT---AT--------TAAATAT---------
gi|62313 : TTTCGTAAACAAATGCCTCTAGACAATAATACA----TA----TCATTA--TTTA-CA--acatttgaagtgtctgaaaactggtacagtat
gi|62314 : TATAACTGATATTCA-TTTTGTTATTAGA-TAAA--GGTTACA---TACACGGCTAATTT---------TTGA------------TTAGTTGTAACAGATGATAACA--ATCTACTTGG-T-TATTTTCA----TTCAAATACCTGAA-GA-------CATG----AC-------AA-TG-ACTGTCTT----AAA---TCTGC----ACATTT----T--------TGACAC-AA--AA--A
gi|62315 : AAAGGCATA-A---TGGA--GATGGTTGC-TACAGATTTGATCAAACTGTCATTT---TGT-GTTGCCATTAAAA-----TTGTAAACT-TATGTTTA----AGGGGATTTT--AA-AGTATTTATC-TGACAAAT-------AT-ACTT--CTCTT----AAA---TCTGT----ATATATATTAC--------A-ACAC-AG--TA--AA-AA----G-TGAAACTCATCTTCAA-----CAA---CATTTATA-TCACA-C-------AATGT------A----C-ATA--------AC-CTTCGATCT---C-TTTC-TT-T---ATA---TCT--GTAACGACCACTTTC--AATTTCCAG-TCAT-----G---AGAAC-T---CGA----
gi|62316 : AATGGAGATAAGTTGCT--ACCAGTTT--TA------TCA---AACTGTCATTT---TGTGAT-GCC-ATTAAA--ATTGT-TAAC-T-TATGGTCAG---TTGGATTATT--AA-AATATTTATC-TGGCAAAT-------AT-GCT----TCTCCCTTAAA---TCTGT----ATATATATATT--------GCA-AC-AG--TA--AA-AA----G-TGAAACTTATCTTCTA-----CAA---CATTTACA-TCACA-C-------AATGT------A----C-ATA--------AC-CTTCGATCT---C-TTTC-TA-T---ATT---TAT--GTAACGACCCCTTTC--AATTTCCAGGTCAT-----G---AGAAC-T---CGA----
gi|62317 : TGTCATTT---TGT-GTTGCCATTAAAA-----TGATAAACT-TATGTTCAG---TTGGATTATC--AA-AATATTTATC-TGGCAAAT-------AT-GATT--CTCTT----AAA---TCTGT----ATATATATTAC--------A-ACAC-AG--TA--AA-AAT-----TGAAACTCATCTTCTA-----CAA---CATTTACA-TCAC---------------------A----CA--ATGTACATTAC-CTTCGATCT---C-TTTC-TA-T---ATT---TCT--GTAACGACC-CTTTC--AATTTCCAGGTCAT-----G---AGAAC-T---CGATCTGAAGCTTGCATAGATATGACGAAATTTT---CT--G------------ATATTTAG--TACATGGAGATA-CTTTTC
gi|62318 : GTTGAAGCAATCGATAAAA--ATCT-----G-TATGTTCTGAATGTCCTATATACC--AA----------T-TA-TACAG-------ATGTGT---TTCTCTA--ACA---TGGGT----ATA-CT----T--------AGA-AC-AATTAA--AA-AAT-ACA-TGGTATTCGTTTTCTA-----TCA---CCATTATATTGGAA-T-----TTAAGA-----A-A----CAAAATAAAC---AT-ATTCTATTTTCTC-TTTC-AA-T---TTT---AAA--ATGTCGACCAATTTC--AATATTTAGTCGAT-----GAGAGGAGCAT---CTA----AAACGTGCA-AATGATC------GTTTGAGAT--TGAACGAAAGG------TCAA--TGTT--TAAATA-TCTTTCAGGATT-TAATAAGGATTTAATATGT-----TTATA-TGTACCTGGGTGAGTTGAT----T----------ATATCATCA-TGCC-AAG---ATTGAGTCATACAATCTGAGATTAAACGTTTAAATATTAA
gi|62319 : TAAAACAATCTTTTACG-T-TATTTTCA----CTGAAATATC--AA-GA-------C-TG-TAAAA-------AT-CGAC--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AA--AAGGAA-AA--ACA-TGATATACATTTTCTA-----GAA---TGTTTATATTTGCA-T-----T-AATAT----A-A----CAATAAGTAA---AC-TTTCGGTCTTCCC-TTTC-AA-T---ATA---TTC--GTGGTGACTAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAC---GGA----AAACAGGCA-AGAGA-T------TTTT---AT--GCAA--ATAGAGAAT-TTCAA--TACA--AAGGTA-TTTTTCTGGATTGTA-TAAGGTTTTGTTATAC-----TTTTA-AGTGTCCAAACATGCAGAT--------TA-CAAGATACTACCA-TGCC-AGTATAACTTGGGCATGCAAACTGATAGTCGTTG---AAATGCTAAAATAAACATA
gi|62320 : --ATCTAATAAA-T-AAGTTTCA----CCATAGCACC--AA-GA-------C-TG-TAGAAGGATTTGAC-TGTA--GTCTG----AG--------------TATCA----A--------GGACAT-AT--AC--TC-AAT-ACA-TGACATTCATTTTCTAATACATGAGAGTGTTCA-ATTAGTAAT-----C-AATA-----A-AGG--CAAGA---AC---AC-TTTT-------CC-GATG-AA-A---ATT---TTA--ATGACGACCGGTTTC--TATTTTCAACGTGTTAA--GACCGGAATAT---CGA----TAACGAGCC-ATTGA-T------TTGT---AT--GTAC--AAA
gi|62321 : CC--AATGG-------C-AG-TAAAT-------AT-T-TA--GG-------AGACAATCCGTTGTAATATCT----CTATAGAAAGGACAA-AC--AA--TA-ACA-AAA-TGATATTCGTCTTCCA-----C---------TACATTC-------------ATCT----G-A----CAATATATAC---AT-TTTCTATCTGATC-TATC-TA-T---ATT---TCT--ATAACGACCCTCTTC--AATGGCAAGTTTGT-----GAGCGGAACAA---CGT----AA
gi|62322 : ATCT----A--------GGACACTCG--AA--AA-AA---CA-TGATATTCACATTCTG-----TAA--------------------------AACAT----ATA----CAACAT--------C-TTT-GTTCT---C-TTTA-AA-T---ATG---TAT--GTGTCGTCCAGTTTT--GACATGGAGTCTAT-----GGTTTGGACAG---CAT----AAACGAGCA-AAAGCAA------TTTT---AT--ACAT--ACGCGGTAT-TTCTA--TATT--TAGATA-TCTCTCTTGATC-AACTAATGTCTT
gi|62323 : CT----T--------GGA-AC-AATTGA--AA-AAT-ACA-TGATACTCGTTTTCTA-----TCA---CCATTATATT-G---------G-AATTT----A-AGAAGCAAAATAAAC---AT-ATTCTATGTTATC-CTT--AC-T---GTT---CAC--ATGTCGATCATGTTC--AGTATT-------T-----AACAGGCGCAT---CGA----AAACGTTCC-AGTGACC------GTTTGAGAT--TGAA--CGAAAGA----TCAA--TGTT--TAGATA-TCTTTCAGGATT-TAATAAGGATTTAATATGT-----TTATA-TGTATCACA---TCTGGATGAGATGATTG------TATCATCA-TGTCAAGT----TTGAGTCATACAATCTGAGA-TCCTCGTTGAAATGTTAAGACAAATAGGTTA
gi|62324 : ACAC-AA--AA--AA-AA----A-TAATACTCGTCTTCCA-----TTT---CGTGTGTATT-ACA-T------------------A----CA----GTGC---AA-TATCGTTATAGTCAATTC-TA-T---TTTG--TTC--GTATCGACCAATTTC--AATTCTAAGCTTAT-----GA
gi|62325 : AC-AG--AT--AATGATGAAA-TGATACTCGTCTTCCA-----AAT---CGTGTGTATT-ACA-T-----A-AA-GT----G------CAATAT----------TTTCGGTTGTGG----TC-AA-TTCTGTTCTGTTC--ATAACGACCAGTTTC--AATTCTAAGCTTAT-----GA
gi|62326 : AC-AG--ATT-AA-AAT-AAAGTGATATTCATCTTCTA-----TAT---CGTTTTTGTT------------------------A----CAA-A-GCAC---ACATTTC---CTTTCA-TTTCTAACT---ATG---TTCCTGTGACGTCCAGTTTCTATATTTTG
gi|62327 : --AA--AA-AAT-ACA-CGGTATTTGTTTTCTA-----TCA---CCAGTGTATTCGAA-TTTAAAA-AACAG----A-A----AAACATAT------C-T----GTTTTATC-TCTC-AA-T---GTT---CAA--ATGACGATCAATTTC--AATGTTTAATCTAT-----GAAAGGAGCAT---CAA----AAATGTGCC-AGTGATC------GTTTGAGAT---TGA--AAGAAAAAT---CAAGGTTTA--AA--TA-TCTTTCCGGATT-CAATAAGGATTTAATATGT-----TTATA-TGTATCCCATC-TGGGAAA----G--TTGATG--ATATTGTCA-TGCC-AAT---TTTGAGTCA--CAATCTGAGATCCTTTGTTTAAATGTTAAGTTAAA
gi|62328 : -AA-TG--ATT---TTC-----ACGATCAGTTTC--TATTTTTAACTGG------GACTGGAGCCT---CGA----AAACGGGCT-ATTGCTT------TTTT---ATATGTAG--AAACGG------CAA--GACA-----------TCTCTGGATT-TAATAAAGTTTTAAAATACCAGCTTCGTCTAGTGACACA-----TGCAT----T--TTG-TA--ATGATATC
gi|62329 : --TATA--GAGCTA-TTTTTTTGGATT-TAATTAGGTTTTAAAACAT-----TTATA-GACGTTACAACG-G------------------------TACCA-TGCC-AGT---GTT-CATCATACAATtggggcaacgattacttgcattatccatatgtaaa
blockSeqs : GA TT T G ACAC ATGT GT T TC TTCAA T TA ATACATTT CTGAAAACC AAT G TATAAATAAT G T AGT CG C C A TCA A CA TC C A ATGT TG T TATTTAT A A AGGATTTG G ACT CCTT CAA TGTA CTATAGAAA T TT GG T TG G ATACA GAG CGAATTTAAAA AAGAA GAAG TGT ATT A TG A T C TCT CTG CT TAT G GAGAG TTA TCTG T ACGAAA GAG AT CG A GG TGG TT G G CAGCT T GAGATGAT A AG . A ATA
blockSeqs : A T T G ACAG . . T TT TACAA . . . . . . TACAATATT . . . . C . . . A . TC C A ATGT . . TATTTAT . G AGGA G A CA . . ATTAC . TT T . T . . . GGAATTT AT GG TGT . . TG . . . G G . T G TAA . . . . GAG . . . . A C . G . . TC . . . . .
blockSeqs : . . C . . . . . . . . . . . . . TACAATATT . . . . C . . . A . TC . . G . . TATTTAT . G C . A TA . . ATATT . TT . . T . . . AGTAATC A . TGT . . TG . . . . . . T G . . . . . GAG . . . . A C . G . . TC . . . . .
blockSeqs : . . G . . . . . . . . . . . . . TACAATACT . . . . C . . . A . TC . . G . . . . . C . A . . . ATTAC . . . . T . . . CGTATG A . TGT . . TG . . . . . . T G . . . . . . . . . . A C . G . . TC . . . . .
blockSeqs : . . . . . . . . . . . . . . . . TTAT . . . . C . . . A . TC . . . . . . . . C . A . . . C . . . . T . . . CGCATG A . TGT . . TG . . . . . . T G . . . . . . . . . . A C . G . . TC . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . C . . . A . TC . . . . . . . . C . A . . . C . . . . T . . . CGCATG A . TGT . . TG . . . . . . T G . . . . . . . . . . A C . A . . TC . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . C . . . A . TC . . . . . . . . C . A . . . C . . . . T . . . CGCATG A . TGT . . TG . . . . . . T G . . . . . . . . . . A C . A . . TC . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . C . . . A . TC . . . . . . . . C . A . . . C . . . . T . . . CGCATG A . TAA . . TC . . . . . . T T . . . . . . . . . . A T . A . . TC . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . A . AC . . . . . . . . T . C . . . C . . . . G . . . CGCATG G . TGT . . TG . . . . . . A G . . . . . . . . . . T T . C . . GT . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . TG . . . . . . . . G . A . . . C . . . . T . . . TGCATG A . TGT . . TC . . . . . . T C . . . . . . . . . . A T . A . . TT . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . GA . . . . . . . . C . A . . . C . . . . T . . . TGCATG A . TAA . . TC . . . . . . A C . . . . . . . . . . T T . A . . T . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . TT . . . . . . . . C . T . . . A . . . . T . . . TGCATT A . AGT . . GA . . . . . . A C . . . . . . . . . . T T . A . . . . . . . .
blockSeqs : . . . . . . . . . . . . AA . . . . . . . . T . T . . . T . . . . T . . . CACAC A . TAT . . TA . . . . . . A T . . . . . . . . . . A T . A . . . . .
blockSeqs : . . . . . . . . . . T . . . . . . . . T . C . . . C . . . . T . . . CACAC G . TAA . . AG . . . . . . A G . . . . . . . . . . G . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . T . A . . . T . . . . A . . . ACATA A . TAT . . TG . . . . . . T C . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . G . A . . . T . . . . T . . . ACAT G . GT . . TT . . . . . . T A . . .
blockSeqs : . . . . . . . . . . . . A . . . . . C . . . . T . . . CAC A . GC . . TA . . . . . . A G . . .
blockSeqs : . . . . . . T . . . . . A . . . . T . . . TG . . T . . . . . . . . . G A . . .
blockSeqs : A . . . . . . . . GG . . T . . . . . . . . . A A . . .
blockSeqs : T . . . . . . . . C . . . . . . . . . . . . A G . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . A T .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . A T .
blockSeqs : . . . . . . . . . . . . T .
blockSeqs : . .
blockSeqCons : TAAATAT****
originalCons : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTACAA-TA-T-CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCCGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--NATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
finalCons : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTAAATAT----CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCCGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--NATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
Alignments
lowQualScore : 11111 11111111 111111111 66666666666 1111 2222222 11111111 1111 1111111111111 1111111111111 111
lowQualScore : 55 55 8 4 0 8888 4444 33 4 66 44444 3 44 22222222 333333333 666 3 00000000000 0 3 3 555 44 1 3 3 555 5 0 33 22 4 4 3333 22 2 0000000 2 6 11111111 4 444 0000 333 4444 6666666666666 1 66 33 1 55 1 44444 333 4444444444444 555555 6666 1 333 333 1 44 1 1 1 444 444 22 333 2 77777 333 4444 2 777777 333 33 33 2 33 444 44 2 2 77777 2 0 88888888 2 33 3 3 555
lowQualScore : .. .. . . . .... .... .. . .. ..... . .. ........ ......... ... . ........... . . . ... .. . . . ... . . .. .. . . .... .. . ....... . . ........ . ... .... ... .... ............. . .. .. . .. . ..... ... ............. ...... .... . ... ... . .. . . . ... ... .. ... . ..... ... .... . ...... ... .. .. . .. ... .. . . ..... . . ........ . .. . . ...
lowQualScore : 33 33 9 4 1 9999 7777 22 7 55 33333 3 66 11111111 333333333 444 6 33333333333 7 6 6 444 22 5 1 1 444 0 7 22 55 7 7 9999 99 1 5555555 1 3 33333333 2 333 3333 777 5555 4444444444444 7 66 88 7 00 7 22222 000 4444444444444 888888 1111 0 000 000 7 66 7 7 7 666 666 33 333 4 44444 333 0000 5 222222 111 44 44 7 44 222 22 7 5 11111 9 9 55555555 9 99 1 1 444
consensus : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTAC-AATA-T-CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCCGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--NATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
Reference ( family-575 ) : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTA--AATA-T-CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCCGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--NATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62295 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTAC-AATA-TTCTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTT--GTGACGACCAGTTTC--TCTTTTGAGCTTGT-----GACTAGATCAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACATGTGGAT----T--CTG-CA--ATACTACCATTACC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62296 : AATACAA--T--ATATA-ATGTTTTATTTCCTAAACAAAGGCCTCCTGTCCAAAATACA----T
gi|62297 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTAC-AATA-TTCTTTTCTATTATAA----GATTCA-TTTCGT-ACCAAAATAAAATGGATGTA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGTA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGATGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--ATAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAATCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62298 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TT-----------CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGATAAAATAAACATATTA
gi|62299 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TT-----------CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62300 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAA---GTGGAAATAT-TT-----------CTTTTCTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62301 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------GAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TT-----------CTTTTCTATTATAAATGTGATTCA-TTTCGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCC----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA-CTTTTCTGGATT-TAGTAAAGTTTTGAAGTAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62302 : AATACAAA-T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAAATATGAAAT--------TAAATAT---------GGCATACAATTTAT---GTGGAAATAT-TTTAC-AATA-TTCTTTTTCATTATAATTGTGATTCA-TTTTGT-ACCAAAATAAAATGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGGTGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCA----CCGGAATACC--AA-GA-------C-TG-TAAAC-------AT-TGTA--GTCTC----AGA---TCCGC----ATATCT----C--------GGATAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTA-----TAA---CGTTTATATTCGCA-T-----G-AATAT----A-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--ATGACGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAACGGGCA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATA--TTTAAT--ATT-TAATAAAGTTTTGAAATAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATGCATTCTGATAGGCGTTGTTTAAATGCTAAAATAAACATATTA
gi|62303 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----TCATTA--TTTA-CA--AACATTT-----AGTAG-TGT--CAAACTATGAAAT--------GAAATAT---------GGCATACAATGTAT---GTGGTAATAT-TTTAC-AATACT-CTTTTTTATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAGTGGATATA---TGCA--GCTAGTTTCCTA-AG-TTTGA---AGATGTCATTTAGTTGTAGTAGCTGATAAAA--ATCTTCTAAG-T-TATTTTCG----CCGGAATACC--AA-GA-------C-TG-TAAAT-------AT-TGTA--GTCTC----AGA---TCCGT----ATATCT----C--------GGACAC-AG--AA--AA-AAT-ACA-TGATATTCGTCTTCTG-----TAA---CGCTTATACTTGCA-T-----G-AATAT----G-A----CAATATGTAC---AC-TTTCGGTCTTGCC-TTTC-AA-T---ATT---TTC--GTGGCGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---CGA----AAA-GGGAA-AGAGATT------TTTT---AT--GTAA--AAAGGGAAT-TTCAA--TACA--AAGATATTTTTTCTGGATT-TAATAATGTTTTGAAATAC-----TTATA-AGTGTCACAACGTGTGGAT----T--CTG-CA--ATACTACCA-TGCC-AGT---ACTGGGTCATACAATCTGATAGTCGTTGTTTAAATGCTAAAATAAACATATT
gi|62304 : AATACAA--T--ACA-A-ATCCTTTATTTCGTAAATAGAGGCCTCCGGCCCAAAATACA----TA----
gi|62305 : ATAAAA--T--ACATG-ATGTTTTATTTTGTAAACAAAGGCCTCCGACCCAAAATACA----TA----TCATTA--TTTA-CA--GCAATTT------GTA
gi|62306 : ATACAG--T--GTACA-ATGTTTTATTTCGCAAACAAAGGCCTCCAGCCTAAAATATA----TA----TCATTA--TTTA-CA--tgaggatcacatgcatgttatatttgtagttcttttttaacagacattgattcaataagatatttttcttattctataaatggcgtccagttgtagaattttgtaaacatgtaataggtcagtttcaccagagtgtcaagaaaatagaagatgacgtcaatctgatatctgggaca
gi|62307 : ACACAA--T--ATAGA-ATTATTTATTT-GTAAACAAAGGCCCCCGGCCCAAA-TACA----TA----TCATTA--TTTA-CA--
gi|62307 : TTTAA----CCAGAATACC--AA-GA-------A-AA-TAGAAGGA----AA-TGAC--GTT-------AA---TCTGA----GTATCT----A--------GGACAT--T--AA--AG-AAG-ACA-TGATATTCATCTTCTA-----gcaaattgtatgagttacacatgttaatatgtgttattctatattttttgcatacaataaattgttcttattttataagtgtcttcctgttgaagaatgttgtaataaaatgaaagataggtttaaccagaataccaagaaaatagaaggaaatgacgttaatctgagtatctaggacattaaagaagacatgatattcatcttcta
gi|62308 : acacaatatagaattatttatttgtaaacaaaggcccccggcccaaatacatatcattatttacagcaaattgtatgagttacacatgttaatatgtgttattctatattttttgcatacaataaattgttcttattttataagtgtcttcctgttgaagaatgttgtaataaaatgaaagataggATACAA--TTTACA-C--TGTTTTATTTCGTAAAAAAAGGTCTCCGACCCAAAATACA----TAATGTTCATTA--TTTA-CA--GCAATTT-----A
gi|62309 : ATACAAGAT--GCA-AGATGTTTTATTGAGTAAATGAAGGCCTCCGGCCCAAAATACAACACTA------ATTG--TTGATCATCGATGTTTTTCAAAGTTG-TGTTACAATATATTAAATATACATTTGAAGTGTCTGAAAACCGG--TACAGTATATAATGTGGAACTATGTTT-----TA-T-CTTT--------AATTTTTAAACAGTTTTGT---TAAAAAAAGAGCAATGTT---TTTA--A-TAGTCTC-TG-GA-TTC----------TCGCTT---TGAAGGAATCGATAAAA--ATCT-----G-TATGTTCTGAATGTCCTATATACC--AA----------T-TA-TACAG-------ATGTGTA---TCTCCA--ACA---TGAGT----ATA-CT----T--------AGA-AC-AATTAG--AA-AAT-AC--TAGTATTCGTTTTCTA-----TCA---CCATTATATT-----T-----G-AATTTAAGAA-A----CAAAATAAAC---AT-ATTCTATTTTCAG-TTTC-AA-T---GTT---AAA--ATGTTGACCAATTCC--AATATTTAGTCTGTGAGAGGAGTACAGCATTTACGA----AAAC
gi|62310 : TATAA--T--ACA-A-ATTCTTTATTTCGTGAATAGAGGCCTACGGCCCAAAGTACA----TA----CCATTA--TTTA-CA--AGCATTT-----GGTAG-TGT--CAAAATATAAAAT--------GATATAT---------GGCAAACAATTTAT---GTGGAAATAT-TTTATAAATAAT-CTTTT-TATTATAATTGTGATTCA-TTTCGT-ACCAAAATAAAGTGGACATA---TGCA--GCTAGTTTCCTA-AG-TGTGA---AGGTATCATTTAGTTGTAGTAGCTGATAAAA--CTCTTCTAAG-T-TATTTTCA----CAAGAATACT--AT-GA-------T-TG-TAAAC-------AT-CGTA--GTCTC----TGA---TCCGC----ATATCT----C--------AGACAC-AG--AA--AG-AAT-ACA-TGATATTCGTCTTTTA-----GAA---TGGTTATATTTGCA-T-----G-AATAT----A-A----CAATATGTGC---AC-TTTCGGTCTTGCC-TTTT-AA-T---ATT---TTC--GTGGCGACCAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAT---AGA----AAACGGG
gi|62311 : TACAA--TT-ACA-A-ACCTTTTATTTCATAAACAGAGGCATCTGGCCCAAAATACA----TA----TGTTTAGTTTTA-CA--AACATTT-----A--AGTTGT--CA--------------------AAGTAT---------GGCATAAAATTTAT---GTGGAAATGT-TTTA--
gi|62312 : A--T--ACA-AGATGTTTTATTGAGTAAATAAAGGCCTCCGGCCCAAAATACAACAGTA------ATTA--TTGATCATTGATGTTTTACAAAGTTG-TGT--TACAATAT---AT--------TAAATAT---------
gi|62313 : TTTCGTAAACAAATGCCTCTAGACAATAATACA----TA----TCATTA--TTTA-CA--acatttgaagtgtctgaaaactggtacagtat
gi|62314 : TATAACTGATATTCA-TTTTGTTATTAGA-TAAA--GGTTACA---TACACGGCTAATTT---------TTGA------------TTAGTTGTAACAGATGATAACA--ATCTACTTGG-T-TATTTTCA----TTCAAATACCTGAA-GA-------CATG----AC-------AA-TG-ACTGTCTT----AAA---TCTGC----ACATTT----T--------TGACAC-AA--AA--A
gi|62315 : AAAGGCATA-A---TGGA--GATGGTTGC-TACAGATTTGATCAAACTGTCATTT---TGT-GTTGCCATTAAAA-----TTGTAAACT-TATGTTTA----AGGGGATTTT--AA-AGTATTTATC-TGACAAAT-------AT-ACTT--CTCTT----AAA---TCTGT----ATATATATTAC--------A-ACAC-AG--TA--AA-AA----G-TGAAACTCATCTTCAA-----CAA---CATTTATA-TCACA-C-------AATGT------A----C-ATA--------AC-CTTCGATCT---C-TTTC-TT-T---ATA---TCT--GTAACGACCACTTTC--AATTTCCAG-TCAT-----G---AGAAC-T---CGA----
gi|62316 : AATGGAGATAAGTTGCT--ACCAGTTT--TA------TCA---AACTGTCATTT---TGTGAT-GCC-ATTAAA--ATTGT-TAAC-T-TATGGTCAG---TTGGATTATT--AA-AATATTTATC-TGGCAAAT-------AT-GCT----TCTCCCTTAAA---TCTGT----ATATATATATT--------GCA-AC-AG--TA--AA-AA----G-TGAAACTTATCTTCTA-----CAA---CATTTACA-TCACA-C-------AATGT------A----C-ATA--------AC-CTTCGATCT---C-TTTC-TA-T---ATT---TAT--GTAACGACCCCTTTC--AATTTCCAGGTCAT-----G---AGAAC-T---CGA----
gi|62317 : TGTCATTT---TGT-GTTGCCATTAAAA-----TGATAAACT-TATGTTCAG---TTGGATTATC--AA-AATATTTATC-TGGCAAAT-------AT-GATT--CTCTT----AAA---TCTGT----ATATATATTAC--------A-ACAC-AG--TA--AA-AAT-----TGAAACTCATCTTCTA-----CAA---CATTTACA-TCAC---------------------A----CA--ATGTACATTAC-CTTCGATCT---C-TTTC-TA-T---ATT---TCT--GTAACGACC-CTTTC--AATTTCCAGGTCAT-----G---AGAAC-T---CGATCTGAAGCTTGCATAGATATGACGAAATTTT---CT--G------------ATATTTAG--TACATGGAGATA-CTTTTC
gi|62318 : GTTGAAGCAATCGATAAAA--ATCT-----G-TATGTTCTGAATGTCCTATATACC--AA----------T-TA-TACAG-------ATGTGT---TTCTCTA--ACA---TGGGT----ATA-CT----T--------AGA-AC-AATTAA--AA-AAT-ACA-TGGTATTCGTTTTCTA-----TCA---CCATTATATTGGAA-T-----TTAAGA-----A-A----CAAAATAAAC---AT-ATTCTATTTTCTC-TTTC-AA-T---TTT---AAA--ATGTCGACCAATTTC--AATATTTAGTCGAT-----GAGAGGAGCAT---CTA----AAACGTGCA-AATGATC------GTTTGAGAT--TGAACGAAAGG------TCAA--TGTT--TAAATA-TCTTTCAGGATT-TAATAAGGATTTAATATGT-----TTATA-TGTACCTGGGTGAGTTGAT----T----------ATATCATCA-TGCC-AAG---ATTGAGTCATACAATCTGAGATTAAACGTTTAAATATTAA
gi|62319 : TAAAACAATCTTTTACG-T-TATTTTCA----CTGAAATATC--AA-GA-------C-TG-TAAAA-------AT-CGAC--GTCTC----AGA---TCCGC----ATATCT----C--------GGACAC-AA--AAGGAA-AA--ACA-TGATATACATTTTCTA-----GAA---TGTTTATATTTGCA-T-----T-AATAT----A-A----CAATAAGTAA---AC-TTTCGGTCTTCCC-TTTC-AA-T---ATA---TTC--GTGGTGACTAGTTTC--TATTTTGAGCTTGT-----GACTAGAACAC---GGA----AAACAGGCA-AGAGA-T------TTTT---AT--GCAA--ATAGAGAAT-TTCAA--TACA--AAGGTA-TTTTTCTGGATTGTA-TAAGGTTTTGTTATAC-----TTTTA-AGTGTCCAAACATGCAGAT--------TA-CAAGATACTACCA-TGCC-AGTATAACTTGGGCATGCAAACTGATAGTCGTTG---AAATGCTAAAATAAACATA
gi|62320 : --ATCTAATAAA-T-AAGTTTCA----CCATAGCACC--AA-GA-------C-TG-TAGAAGGATTTGAC-TGTA--GTCTG----AG--------------TATCA----A--------GGACAT-AT--AC--TC-AAT-ACA-TGACATTCATTTTCTAATACATGAGAGTGTTCA-ATTAGTAAT-----C-AATA-----A-AGG--CAAGA---AC---AC-TTTT-------CC-GATG-AA-A---ATT---TTA--ATGACGACCGGTTTC--TATTTTCAACGTGTTAA--GACCGGAATAT---CGA----TAACGAGCC-ATTGA-T------TTGT---AT--GTAC--AAA
gi|62321 : CC--AATGG-------C-AG-TAAAT-------AT-T-TA--GG-------AGACAATCCGTTGTAATATCT----CTATAGAAAGGACAA-AC--AA--TA-ACA-AAA-TGATATTCGTCTTCCA-----C---------TACATTC-------------ATCT----G-A----CAATATATAC---AT-TTTCTATCTGATC-TATC-TA-T---ATT---TCT--ATAACGACCCTCTTC--AATGGCAAGTTTGT-----GAGCGGAACAA---CGT----AA
gi|62322 : ATCT----A--------GGACACTCG--AA--AA-AA---CA-TGATATTCACATTCTG-----TAA--------------------------AACAT----ATA----CAACAT--------C-TTT-GTTCT---C-TTTA-AA-T---ATG---TAT--GTGTCGTCCAGTTTT--GACATGGAGTCTAT-----GGTTTGGACAG---CAT----AAACGAGCA-AAAGCAA------TTTT---AT--ACAT--ACGCGGTAT-TTCTA--TATT--TAGATA-TCTCTCTTGATC-AACTAATGTCTT
gi|62323 : CT----T--------GGA-AC-AATTGA--AA-AAT-ACA-TGATACTCGTTTTCTA-----TCA---CCATTATATT-G---------G-AATTT----A-AGAAGCAAAATAAAC---AT-ATTCTATGTTATC-CTT--AC-T---GTT---CAC--ATGTCGATCATGTTC--AGTATT-------T-----AACAGGCGCAT---CGA----AAACGTTCC-AGTGACC------GTTTGAGAT--TGAA--CGAAAGA----TCAA--TGTT--TAGATA-TCTTTCAGGATT-TAATAAGGATTTAATATGT-----TTATA-TGTATCACA---TCTGGATGAGATGATTG------TATCATCA-TGTCAAGT----TTGAGTCATACAATCTGAGA-TCCTCGTTGAAATGTTAAGACAAATAGGTTA
gi|62324 : ACAC-AA--AA--AA-AA----A-TAATACTCGTCTTCCA-----TTT---CGTGTGTATT-ACA-T------------------A----CA----GTGC---AA-TATCGTTATAGTCAATTC-TA-T---TTTG--TTC--GTATCGACCAATTTC--AATTCTAAGCTTAT-----GA
gi|62325 : AC-AG--AT--AATGATGAAA-TGATACTCGTCTTCCA-----AAT---CGTGTGTATT-ACA-T-----A-AA-GT----G------CAATAT----------TTTCGGTTGTGG----TC-AA-TTCTGTTCTGTTC--ATAACGACCAGTTTC--AATTCTAAGCTTAT-----GA
gi|62326 : AC-AG--ATT-AA-AAT-AAAGTGATATTCATCTTCTA-----TAT---CGTTTTTGTT------------------------A----CAA-A-GCAC---ACATTTC---CTTTCA-TTTCTAACT---ATG---TTCCTGTGACGTCCAGTTTCTATATTTTG
gi|62327 : --AA--AA-AAT-ACA-CGGTATTTGTTTTCTA-----TCA---CCAGTGTATTCGAA-TTTAAAA-AACAG----A-A----AAACATAT------C-T----GTTTTATC-TCTC-AA-T---GTT---CAA--ATGACGATCAATTTC--AATGTTTAATCTAT-----GAAAGGAGCAT---CAA----AAATGTGCC-AGTGATC------GTTTGAGAT---TGA--AAGAAAAAT---CAAGGTTTA--AA--TA-TCTTTCCGGATT-CAATAAGGATTTAATATGT-----TTATA-TGTATCCCATC-TGGGAAA----G--TTGATG--ATATTGTCA-TGCC-AAT---TTTGAGTCA--CAATCTGAGATCCTTTGTTTAAATGTTAAGTTAAA
gi|62328 : -AA-TG--ATT---TTC-----ACGATCAGTTTC--TATTTTTAACTGG------GACTGGAGCCT---CGA----AAACGGGCT-ATTGCTT------TTTT---ATATGTAG--AAACGG------CAA--GACA-----------TCTCTGGATT-TAATAAAGTTTTAAAATACCAGCTTCGTCTAGTGACACA-----TGCAT----T--TTG-TA--ATGATATC
gi|62329 : --TATA--GAGCTA-TTTTTTTGGATT-TAATTAGGTTTTAAAACAT-----TTATA-GACGTTACAACG-G------------------------TACCA-TGCC-AGT---GTT-CATCATACAATtggggcaacgattacttgcattatccatatgtaaa